DNMT3B

General Information

Gene Name       : DNMT3B
Gene ID             : ENSG00000088305.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DNMT3B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DNMT3BENSG00000088305.180.520.940.73ENCSR000AEF
HepG2DNMT3BENSG00000088305.189.379.909.63ENCSR985KAT
K562DNMT3BENSG00000088305.1844.3243.4843.90ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq DNMT3B-BGHcLV20-HepG2ENCSR290GUQDNMT3BHepG2ReleasedENCSR306EWE   CRISPRKD% = 73.9,81.3






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
DNMT3BENCAB175PCI49-1028A234200170712BGHcLV20-5, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
DNMT3BK562CRISPRBGKcLV15-13,BGKcLV15-14BGKcLV15-1,BGKcLV15-216.9,21.5NotSatisfiedENCODE4
DNMT3BK562CRISPRBGKcLV19-11,BGKcLV19-12BGKcLV19-1,BGKcLV19-259.1,68.0NotSatisfiedENCODE4
DNMT3BK562CRISPRBGKcLV19-13,BGKcLV19-14BGKcLV19-1,BGKcLV19-20.0,0.0NotSatisfiedENCODE4
DNMT3BHepG2CRISPRBGHcLV16-15,BGHcLV16-16BGHcLV16-1,BGHcLV16-20.0,0.0NotSatisfiedENCODE4
DNMT3BHepG2CRISPRENCSR290GUQENCSR306EWEDNMT3B-BGHcLV20-5,DNMT3B-BGHcLV20-6NT-BGHcLV20-1,NT-BGHcLV20-273.9,81.3ReleasedENCODE4
DNMT3BHepG2CRISPRBGHcLV20-7,BGHcLV20-8BGHcLV20-1,BGHcLV20-274.0,86.0NotSatisfiedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
DNMT3BProduct_ID: 49-1028
Lot_ID: A234200170712
Source: Thermo Fisher
Target Name: DNMT3B-human		 DNMT3B-HEPG2-49-1028.png<br>Caption: Western blot following CRISPR against DNMT3B in HepG2 whole cell lysate using DNMT3B specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against DNMT3B. DNMT3B protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for DNMT3B is not avaliable on ENCORE database.



Proteins bound to RNA
  • DNMT3B RNA is bound by 22 proteins.  







eCLIP assay for DNMT3B is not avaliable on ENCORE database.





22 proteins are bound to DNMT3B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr203139569631395743+3'-UTR,CDS3.816315.45588K562PUM2
chr203138625031386309+3'-UTR,CDS,intron-Proximal4.296207.66928K562BUD13
chr203139569531395781+3'-UTR,CDS3.417837.41391K562RBM15
chr203138802031388063+3'-UTR,CDS3.399065.23557K562DDX24
chr203138464731384673+3'-UTR,CDS4.401286.22817K562DDX24
chr203138859931388678+3'-UTR,CDS,intron-Proximal4.091398.08874K562SF3B4
chr203138510431385150+3'-UTR,CDS,intron-Proximal4.544284.98250K562AQR
chr203138866631388716+3'-UTR,CDS3.300685.34771K562DDX24
chr203138464431384730+3'-UTR,CDS,intron-Proximal4.091778.29266K562AQR
chr203138711631387134+3'-UTR,CDS3.531735.14149K562DDX24
chr203138623131386280+3'-UTR,CDS,intron-Proximal5.167366.04760K562AQR
chr203138864531388708+3'-UTR,CDS3.490168.10543K562UCHL5
chr203138633831386415+3'-UTR,CDS4.114534.04443K562SRSF1
chr203136762731367699+5'-UTR,intron-Distal4.310133.48173K562GTF2F1
chr203137940431379449+CDS,intron-Proximal3.917293.02097K562U2AF1
chr203137503731375165+CDS3.952013.82000HepG2GRWD1
chr203139026431390309+CDS,intron-Proximal3.393063.77649K562EFTUD2
chr203137518331375250+CDS3.955629.87150K562UCHL5
chr203136913331369201+CDS,intron-Proximal6.2518016.44435K562AQR
chr203137499031375072+CDS,intron-Proximal3.4948312.06681K562SF3B4
chr203138057531380651+CDS,intron-Distal,intron-Proximal4.7396418.21561K562AQR
chr203139551131395592+CDS,intron-Proximal5.21264400.00000K562SF3B4
chr203139021631390286+CDS,intron-Proximal3.017528.25309K562DDX24
chr203136826831368314+CDS,intron-Proximal3.8128810.78170K562AQR
chr203139553631395586+CDS,intron-Proximal3.500728.72467K562AQR
chr203139548931395597+CDS,intron-Proximal3.134914.79067K562SMNDC1
chr203137502231375078+CDS,intron-Proximal3.369724.85520K562U2AF2
chr203136820031368270+CDS4.437704.38106HepG2PPIG
chr203139460031394637+intron-Distal4.450824.30178K562PTBP1
chr203136831431368386+intron-Distal,intron-Proximal3.246187.85418K562AQR
chr203139374331393794+intron-Distal3.096413.14650K562TIA1
chr203138413231384192+intron-Distal4.506664.72426K562LIN28B
chr203135092231351012+intron-Distal4.122803.96304K562CSTF2T
chr203137532331375374+intron-Distal,intron-Proximal4.212747.22994K562KHSRP
chr203139223931392327+intron-Distal3.744913.25059K562HNRNPU
chr203137924431379313+intron-Distal,intron-Proximal4.7929314.23055K562U2AF2
chr203137924531379312+intron-Distal,intron-Proximal4.252768.82365K562U2AF1
chr203136838631368452+intron-Distal3.596404.41130K562AQR
chr203135386731353941+intron-Distal4.035333.81649K562ILF3
chr203139027631390316+intron-Proximal3.853344.49024K562AQR
chr203136924431369277+intron-Proximal4.768385.17615K562AQR
chr203136910631369135+intron-Proximal3.923114.84268K562SF3B4
chr203137525831375305+intron-Proximal5.167366.44303K562AQR
chr203136924331369318+intron-Proximal4.5894711.99854K562TIA1
chr203137493731375005+intron-Proximal3.198544.30897K562U2AF2
chr203138338231383437+intron-Proximal4.420585.32062K562EFTUD2
chr203138515031385172+intron-Proximal4.823594.65563K562AQR
chr203136907631369133+intron-Proximal3.456638.23725K562AQR
chr203138923531389267+intron-Proximal4.549854.48002K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DNMT3B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DNMT3B is not available on ENCORE database.

  • 133 RBPs can affect the levels of DNMT3B.  








The Knockdown/knockout RNA-Seq assay for DNMT3B is not available on ENCORE database.





133 RBPs can affect the gene expression of DNMT3B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DNMT3BENSG00000088305.14233.90930366.52620-0.648003.472601.54890HepG2AARS
DNMT3BENSG00000088305.14284.65800381.01940-0.420602.870702.25340HepG2ACO1
DNMT3BENSG00000088305.14167.47230250.51020-0.580902.148101.67320HepG2AKAP1
DNMT3BENSG00000088305.14287.65440698.92030-1.2808025.2452023.55310HepG2AUH
DNMT3BENSG00000088305.14135.58060324.88600-1.2608010.628109.01020HepG2BCLAF1
DNMT3BENSG00000088305.14246.12430580.67920-1.2384015.6023014.34590HepG2BOP1
DNMT3BENSG00000088305.14309.59910408.75020-0.400802.290701.58300HepG2CALR
DNMT3BENSG00000088305.14110.99560179.18250-0.690902.230001.54870HepG2CNOT7
DNMT3BENSG00000088305.14335.57370533.09160-0.667805.109804.20080HepG2CPSF6
DNMT3BENSG00000088305.14262.51610428.27170-0.706105.080003.60770HepG2CPSF7
DNMT3BENSG00000088305.14263.15580481.60370-0.8719010.334809.24520HepG2CELF1
DNMT3BENSG00000088305.14332.61040517.94190-0.639007.625706.48520HepG2DAZAP1
DNMT3BENSG00000088305.14526.69040352.404800.579606.593305.39040HepG2DDX19B
DNMT3BENSG00000088305.14206.02440325.59910-0.660304.436002.98800HepG2DDX1
DNMT3BENSG00000088305.14402.86620255.227100.658404.388803.55380HepG2DDX21
DNMT3BENSG00000088305.14159.10780239.98700-0.593002.424001.83450HepG2DDX3X
DNMT3BENSG00000088305.14259.83160367.70940-0.501002.454901.72250HepG2DDX55
DNMT3BENSG00000088305.14370.35220605.36580-0.708903.424302.33980HepG2DDX59
DNMT3BENSG00000088305.14284.87830462.96020-0.700505.354503.99350HepG2DDX5
DNMT3BENSG00000088305.14196.90330307.93590-0.645103.820202.67730HepG2DHX30
DNMT3BENSG00000088305.14146.33420319.25660-1.1254010.909909.58970HepG2DNAJC21
DNMT3BENSG00000088305.14244.06000316.49360-0.374902.162501.57240HepG2DNAJC2
DNMT3BENSG00000088305.14157.10010234.81900-0.579902.383101.35980HepG2AGO1
DNMT3BENSG00000088305.14158.58080294.27740-0.892004.772703.60980HepG2EIF3D
DNMT3BENSG00000088305.14383.75190510.89560-0.412903.258002.36370HepG2EIF4G1
DNMT3BENSG00000088305.14194.71600489.42070-1.3297015.9209014.08650HepG2EIF4G2
DNMT3BENSG00000088305.14649.22300450.447500.527303.998802.70450HepG2ESF1
DNMT3BENSG00000088305.14533.10030802.45180-0.590006.980106.09880HepG2ETF1
DNMT3BENSG00000088305.14526.71300372.355800.500203.666302.70520HepG2EWSR1
DNMT3BENSG00000088305.14137.66710243.09310-0.820303.635502.34960HepG2FASTKD2
DNMT3BENSG00000088305.14204.75040306.02780-0.579803.190301.82920HepG2FKBP4
DNMT3BENSG00000088305.14287.95890534.01270-0.891003.477502.33390HepG2FTO
DNMT3BENSG00000088305.14559.11770220.937101.3394015.5809014.07980HepG2FXR1
DNMT3BENSG00000088305.14378.37500217.574700.798205.370104.11760HepG2G3BP2
DNMT3BENSG00000088305.14395.24430262.007700.593003.659102.61710HepG2GEMIN5
DNMT3BENSG00000088305.14390.53500604.29110-0.629804.277803.49330HepG2GPKOW
DNMT3BENSG00000088305.14490.00970322.315800.604204.372803.58540HepG2HNRNPA1
DNMT3BENSG00000088305.14346.85250475.95530-0.456503.641802.59390HepG2HNRNPA2B1
DNMT3BENSG00000088305.14265.82800471.83570-0.8278010.531809.29440HepG2HNRNPL
DNMT3BENSG00000088305.14358.40880576.68700-0.686205.226404.39130HepG2HNRNPLL
DNMT3BENSG00000088305.14405.50360519.11270-0.356302.362501.69080HepG2IGF2BP1
DNMT3BENSG00000088305.14426.54460195.503001.125404.505603.25920HepG2IGF2BP3
DNMT3BENSG00000088305.14202.22300363.80610-0.847205.716204.69530HepG2ILF2
DNMT3BENSG00000088305.14320.12620170.834300.905905.707103.90930HepG2KHDRBS1
DNMT3BENSG00000088305.14349.06290532.91550-0.610403.513702.57630HepG2LARP4
DNMT3BENSG00000088305.14394.49630513.58480-0.380602.779802.01360HepG2NOL12
DNMT3BENSG00000088305.14257.64870352.51770-0.452302.806201.95220HepG2PARN
DNMT3BENSG00000088305.14307.42140223.166100.462002.594402.00170HepG2PCBP1
DNMT3BENSG00000088305.14132.63760283.50170-1.095907.754106.48250HepG2PRPF8
DNMT3BENSG00000088305.14388.23190227.075100.773605.504104.78720HepG2PTBP1
DNMT3BENSG00000088305.14272.27380520.37260-0.9345014.1870013.06220HepG2PUM1
DNMT3BENSG00000088305.141009.62190520.012600.9571011.8972010.56210HepG2PUM2
DNMT3BENSG00000088305.14618.39910388.098200.672008.657507.66990HepG2PUS1
DNMT3BENSG00000088305.14359.02480245.938100.545703.261502.59140HepG2QKI
DNMT3BENSG00000088305.14803.06440262.618801.6124015.1970013.67330HepG2RAVER1
DNMT3BENSG00000088305.14446.96320670.70170-0.585506.124805.42770HepG2RBM22
DNMT3BENSG00000088305.14303.64160173.091800.810704.209602.33520HepG2RBM47
DNMT3BENSG00000088305.14425.94190300.661200.502402.335001.36390HepG2RCC2
DNMT3BENSG00000088305.14647.13520252.716701.3564023.5544022.28390HepG2NELFE
DNMT3BENSG00000088305.14508.63680235.364001.1116014.9047013.65120HepG2RECQL
DNMT3BENSG00000088305.14206.67650567.94470-1.4584020.5101018.99730HepG2RPLP0
DNMT3BENSG00000088305.14196.85900286.37330-0.540702.854902.23170HepG2RPS19
DNMT3BENSG00000088305.14194.56980287.37530-0.562602.775801.83480HepG2SERBP1
DNMT3BENSG00000088305.14422.20560570.80060-0.435002.725002.02400HepG2SF3B1
DNMT3BENSG00000088305.14144.93670268.05480-0.887104.873703.56720HepG2SMNDC1
DNMT3BENSG00000088305.14159.85780635.11780-1.9902022.3332020.18740HepG2SNRNP70
DNMT3BENSG00000088305.14890.69330757.533700.233501.863001.42700HepG2SRFBP1
DNMT3BENSG00000088305.14686.50040246.771001.4760029.2033028.02730HepG2SRSF1
DNMT3BENSG00000088305.14230.95300483.99580-1.0674014.6693013.39050HepG2SRSF5
DNMT3BENSG00000088305.14348.57580517.94240-0.571305.746204.80180HepG2SRSF7
DNMT3BENSG00000088305.14112.44890245.43790-1.126105.058603.42960HepG2SUB1
DNMT3BENSG00000088305.14701.87190550.469800.350402.878102.24640HepG2SUCLG1
DNMT3BENSG00000088305.14243.15150366.00370-0.590003.362002.62460HepG2SUPV3L1
DNMT3BENSG00000088305.14346.76600221.797600.644604.591803.89740HepG2TAF15
DNMT3BENSG00000088305.14377.68120562.11710-0.573704.136903.27240HepG2TARDBP
DNMT3BENSG00000088305.1488.07940245.29180-1.4776011.328309.58690HepG2TFIP11
DNMT3BENSG00000088305.14279.01790203.812100.453002.169101.42720HepG2TIA1
DNMT3BENSG00000088305.14405.87930263.781200.621602.978601.45190HepG2TRA2A
DNMT3BENSG00000088305.14164.29060349.17770-1.087709.541608.59050HepG2TRIM56
DNMT3BENSG00000088305.14306.62000506.85730-0.725104.678403.57110HepG2UBE2L3
DNMT3BENSG00000088305.1487.27790216.17870-1.308509.340707.94660HepG2UCHL5
DNMT3BENSG00000088305.14294.00490416.04740-0.500903.806403.00750HepG2UPF1
DNMT3BENSG00000088305.14277.96570427.63820-0.621505.345103.93150HepG2UTP18
DNMT3BENSG00000088305.14455.43960288.862600.656803.601102.39140HepG2XRCC6
DNMT3BENSG00000088305.14307.11700455.93690-0.570005.270304.39270HepG2ZC3H8
DNMT3BENSG00000088305.14359.79380457.57250-0.346802.488901.96220HepG2ZNF622
DNMT3BENSG00000088305.142854.652502235.528500.352603.607202.23950K562AARS
DNMT3BENSG00000088305.142328.555103783.76550-0.7004011.258708.90840K562ABCF1
DNMT3BENSG00000088305.144673.013203649.041300.356706.564105.74440K562AGGF1
DNMT3BENSG00000088305.145069.291903797.045000.416805.309904.38910K562AKAP8L
DNMT3BENSG00000088305.141176.038104106.84380-1.8041062.2979059.87940K562AQR
DNMT3BENSG00000088305.144909.272903984.112900.301203.434602.40660K562ATP5C1
DNMT3BENSG00000088305.141467.028702012.97620-0.456403.506602.52470K562BOP1
DNMT3BENSG00000088305.141367.857801846.99400-0.433303.862602.57200K562CCAR1
DNMT3BENSG00000088305.142879.476803717.38890-0.368502.759101.33230K562CKAP4
DNMT3BENSG00000088305.141749.329002140.43360-0.291102.232601.52120K562CPSF6
DNMT3BENSG00000088305.144265.650706228.26930-0.5461011.297309.40850K562CELF1
DNMT3BENSG00000088305.141296.928201946.18390-0.585503.503001.34620K562DDX1
DNMT3BENSG00000088305.142525.005303001.18870-0.249202.892901.65310K562DDX21
DNMT3BENSG00000088305.141538.478501996.40860-0.375905.916903.98330K562DDX27
DNMT3BENSG00000088305.141786.930402143.84920-0.262702.307201.35930K562DDX3X
DNMT3BENSG00000088305.143585.771504332.34750-0.272904.415803.61810K562DDX47
DNMT3BENSG00000088305.141561.116102067.63520-0.405403.485301.97210K562DHX30
DNMT3BENSG00000088305.144709.992304085.565300.205102.422101.61040K562DKC1
DNMT3BENSG00000088305.141545.382101986.17270-0.362003.168501.72730K562DNAJC21
DNMT3BENSG00000088305.141498.070002081.34050-0.474403.590202.10900K562EEF2
DNMT3BENSG00000088305.141639.206502010.90160-0.294802.166001.35890K562EFTUD2
DNMT3BENSG00000088305.142145.516903108.71250-0.5350011.4576010.14290K562EIF2S2
DNMT3BENSG00000088305.141200.821101878.74140-0.645704.147502.89060K562EIF3A
DNMT3BENSG00000088305.143793.804205065.35780-0.417008.634507.00070K562EIF4G2
DNMT3BENSG00000088305.141587.850302177.71970-0.455704.568203.46650K562FMR1
DNMT3BENSG00000088305.141371.162501845.76150-0.428803.490402.45520K562FTO
DNMT3BENSG00000088305.142088.410603384.28500-0.6964017.5062015.08960K562GLRX3
DNMT3BENSG00000088305.141237.219302043.63720-0.7240010.291608.74360K562GPKOW
DNMT3BENSG00000088305.142493.970804142.80800-0.7322014.7190012.93540K562GRSF1
DNMT3BENSG00000088305.142123.959403104.23480-0.547508.743006.93440K562HNRNPA1
DNMT3BENSG00000088305.141621.167402446.52460-0.593709.060808.03260K562HNRNPC
DNMT3BENSG00000088305.142994.610203915.25220-0.386704.701003.28070K562HNRNPL
DNMT3BENSG00000088305.142789.156503437.87250-0.301703.898702.83400K562HNRNPU
DNMT3BENSG00000088305.142932.478403687.50510-0.330503.130702.28660K562HSPD1
DNMT3BENSG00000088305.141305.394801929.61860-0.563805.811603.65650K562ILF3
DNMT3BENSG00000088305.145111.724504029.430900.343104.295003.23690K562KIF1C
DNMT3BENSG00000088305.141251.781801744.88060-0.479103.273802.24940K562KRR1
DNMT3BENSG00000088305.143240.347702437.932000.410404.923403.79450K562MAGOH
DNMT3BENSG00000088305.144663.766903857.305200.273802.697101.63730K562MAK16
DNMT3BENSG00000088305.141763.644302432.84280-0.464106.022804.58790K562MATR3
DNMT3BENSG00000088305.144017.971005399.16200-0.426304.949603.44200K562MSI2
DNMT3BENSG00000088305.142213.317303558.13530-0.6849023.5531021.53320K562MTPAP
DNMT3BENSG00000088305.144563.138303164.007300.528204.129602.99310K562NAA15
DNMT3BENSG00000088305.142957.065103953.40230-0.4189014.4327012.91400K562NSUN2
DNMT3BENSG00000088305.142066.034903637.27680-0.816006.709004.80500K562PABPC1
DNMT3BENSG00000088305.142964.077402383.516200.314403.365301.87280K562PCBP1
DNMT3BENSG00000088305.141712.258402932.60330-0.7763010.597808.97470K562PCBP3
DNMT3BENSG00000088305.141367.509602249.43410-0.7180013.9366012.20230K562POLR2G
DNMT3BENSG00000088305.142476.191403087.29230-0.318202.744101.92650K562PPIG
DNMT3BENSG00000088305.141406.845101956.84230-0.476104.681503.70760K562PRPF8
DNMT3BENSG00000088305.143650.824102368.674000.6240011.5871010.28880K562PTBP1
DNMT3BENSG00000088305.144082.758705526.68320-0.436905.475404.32960K562PUF60
DNMT3BENSG00000088305.144680.331705759.75970-0.299404.638203.38560K562PUM2
DNMT3BENSG00000088305.145742.984603765.254000.609009.207108.26500K562PUS1
DNMT3BENSG00000088305.145113.230803668.981700.4788010.072008.96580K562RBM15
DNMT3BENSG00000088305.14972.004601993.16360-1.0360015.4302013.47670K562RPS19
DNMT3BENSG00000088305.141425.775102072.16320-0.539406.175804.04590K562SDAD1
DNMT3BENSG00000088305.143307.676903901.00750-0.238002.953802.11340K562SF3A3
DNMT3BENSG00000088305.141386.235701943.38990-0.487404.033202.84660K562SF3B1
DNMT3BENSG00000088305.141602.400802034.41070-0.344402.916901.61780K562SLBP
DNMT3BENSG00000088305.142813.950403996.66710-0.5062016.6640014.64620K562SRPK2
DNMT3BENSG00000088305.142282.331703264.02960-0.516105.505303.65500K562STAU1
DNMT3BENSG00000088305.142644.016302256.203200.228702.020701.31920K562SYNCRIP
DNMT3BENSG00000088305.141419.350802349.98590-0.7274010.453708.93490K562TARDBP
DNMT3BENSG00000088305.141601.947702109.82440-0.397303.151602.14840K562TIAL1
DNMT3BENSG00000088305.142901.495202225.029800.382903.078101.91480K562TRA2A
DNMT3BENSG00000088305.142539.601403182.04520-0.325402.685401.33140K562TRIP6
DNMT3BENSG00000088305.144941.075506231.23650-0.334704.116902.40000K562UBE2L3
DNMT3BENSG00000088305.143223.813804191.87670-0.378808.453707.28000K562UPF1
DNMT3BENSG00000088305.142614.466603940.14810-0.591706.359304.56640K562UTP3
DNMT3BENSG00000088305.142670.900103586.85580-0.425405.688804.41310K562WDR3
DNMT3BENSG00000088305.143904.194304865.70330-0.317603.412901.96950K562WRN
DNMT3BENSG00000088305.142841.370704626.56970-0.7034012.8127010.80930K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DNMT3B is not available on ENCORE database.





24 RBPs can affect the splicing of DNMT3B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDNMT3BENSG00000088305.14chr20+3137665931376818313750353137525731379406313795140.059000.004870.07430includedK562SRSF1
SEDNMT3BENSG00000088305.14chr20+313804313138057631379406313795143138321431383340-0.095000.000120.00354excludedK562SRSF1
SEDNMT3BENSG00000088305.14chr20+3139401431394133313901903139027631395567313971620.274000.000000.00021includedK562MATR3
SEDNMT3BENSG00000088305.14chr20+313766593137681831375035313752573137940631379514-0.070000.001770.04882excludedK562AKAP8L
SEDNMT3BENSG00000088305.14chr20+313940143139413331390190313902763139556731397162-0.115000.000010.00050excludedK562AKAP8L
SEDNMT3BENSG00000088305.14chr20+313804313138057631379406313795143138312031383340-0.094000.001870.02071excludedK562AQR
SEDNMT3BENSG00000088305.14chr20+313725633137266531369158313692203137503531375257-0.102000.006060.05450excludedK562AQR
SEDNMT3BENSG00000088305.14chr20+3139401431394133313901903139027631395567313971620.137000.000080.00532includedK562FXR1
SEDNMT3BENSG00000088305.14chr20+313766593137681831375035313752573137940631379514-0.069000.003220.04422excludedK562PUS1
SEDNMT3BENSG00000088305.14chr20+313940143139413331390190313902763139556731397162-0.135000.000000.00000excludedK562PUS1
SEDNMT3BENSG00000088305.14chr20+313725633137266531369158313692203137430731374433-0.052000.004670.05910excludedK562PUS1
SEDNMT3BENSG00000088305.14chr20+313931433139321331390190313902763139556731397161-0.069000.000910.04755excludedK562EFTUD2
SEDNMT3BENSG00000088305.14chr20+3139401431394133313901903139027631395567313971620.421000.001540.05777includedHepG2MATR3
SEDNMT3BENSG00000088305.14chr20+3138134131381401313804163138057631383214313833400.107000.000560.01413includedK562U2AF1
SEDNMT3BENSG00000088305.14chr20+3139401431394133313901903139027631395567313971620.315000.000000.00180includedK562HNRNPM
SEDNMT3BENSG00000088305.14chr20+313931433139321331390190313902763139401431394133-0.295000.000690.08370excludedK562HNRNPM
SEDNMT3BENSG00000088305.14chr20+3137430731374433313725633137266531375035313752570.148000.000020.00340includedK562HNRNPL
SEDNMT3BENSG00000088305.14chr20+313766593137681831375035313752573137940631379514-0.066000.003380.08338excludedK562UTP18
SEDNMT3BENSG00000088305.14chr20+313940143139413331390190313902763139556731397162-0.091000.002210.06142excludedK562UTP18
SEDNMT3BENSG00000088305.14chr20+313743073137443331368980313692203137503531375257-0.092000.000010.00089excludedK562UTP18
SEDNMT3BENSG00000088305.14chr20+313766593137681831375035313752573137940631379514-0.102000.000000.00035excludedK562HNRNPU
SEDNMT3BENSG00000088305.14chr20+313940143139413331390190313902763139556731397162-0.131000.000000.00000excludedK562HNRNPU
SEDNMT3BENSG00000088305.14chr20+313940143139413331390190313902763139556731397162-0.112000.000020.00091excludedK562RBM15
SEDNMT3BENSG00000088305.14chr20+313725633137266531369158313692203137503531375257-0.111000.000990.02711excludedK562RBM15
SEDNMT3BENSG00000088305.14chr20+313766593137681831375035313752573137940631379514-0.088000.000170.00697excludedK562AGGF1
SEDNMT3BENSG00000088305.14chr20+313940143139413331390190313902763139556731397162-0.123000.000000.00023excludedK562AGGF1
SEDNMT3BENSG00000088305.14chr20+313725633137266531369158313692203137503531375257-0.123000.000330.01147excludedK562AGGF1
SEDNMT3BENSG00000088305.14chr20+3139401431394133313901903139027631395567313971620.350000.000320.06248includedHepG2DDX55
SEDNMT3BENSG00000088305.14chr20+313743073137443331372563313726653137503531375257-0.249000.000020.00198excludedK562SF3B1
SEDNMT3BENSG00000088305.14chr20+3138134131381401313804163138057631383214313833400.061000.000750.03602includedK562HNRNPK
SEDNMT3BENSG00000088305.14chr20+3139314331393213313901903139027631395567313971610.154000.000330.06752includedK562SAFB
SEDNMT3BENSG00000088305.14chr20+313743073137443331372563313726653137503531375257-0.623000.000000.00000excludedK562PTBP1
SEDNMT3BENSG00000088305.14chr20+313804313138057631379406313795143138321431383340-0.081000.000440.00970excludedK562HNRNPC
A3SSDNMT3BENSG00000088305.14chr20+3137249531372665313725633137266531369158313692200.188000.000020.00116longerK562U2AF2
A3SSDNMT3BENSG00000088305.14chr20+3138041631380576313804313138057631379406313795140.056000.002320.01470longerK562AQR
MXEDNMT3BENSG00000088305.14chr20+31372495313726653137430731374433313691583136922031375035313752570.594000.000000.000001includedK562PTBP1
MXEDNMT3BENSG00000088305.14chr20+31372563313726653137430731374433313691583136922031375035313752570.272000.000000.000311includedK562PTBP1
MXEDNMT3BENSG00000088305.14chr20+3137665931376818313794063137951431375035313752573138321431383340-0.055000.003500.093032includedK562AGGF1
MXEDNMT3BENSG00000088305.14chr20+3137256331372665313743073137443331369158313692203137503531375257-0.136000.000240.013062includedK562AGGF1
MXEDNMT3BENSG00000088305.14chr20+3137256331372665313750353137525731369158313692203138321431383340-0.105000.000050.000672includedK562AQR
MXEDNMT3BENSG00000088305.14chr20+31368980313692203137256331372665313681233136827131375035313752570.280000.000270.021971includedK562UTP18
MXEDNMT3BENSG00000088305.14chr20+3137665931376818313794063137951431375035313752573138321431383340-0.076000.000140.008832includedK562HNRNPU
MXEDNMT3BENSG00000088305.14chr20+3137249531372665313743073137443331369158313692203137503531375257-0.152000.001830.073562includedK562TIA1
MXEDNMT3BENSG00000088305.14chr20+31379265313793723137940631379514313766593137681831383214313833400.263000.002320.036621includedK562SF3B4
MXEDNMT3BENSG00000088305.14chr20+3136915831369220313725633137266531368123313682713137503531375257-0.138000.003250.055872includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DNMT3B is not avaliable on ENCORE database.