ATRN

General Information

Gene Name       : ATRN
Gene ID             : ENSG00000088812.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATRN)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ATRNENSG00000088812.176.326.296.30ENCSR000AEF
HepG2ATRNENSG00000088812.1741.3742.0641.72ENCSR985KAT
K562ATRNENSG00000088812.177.387.157.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATRN is not avaliable on ENCORE database.



Proteins bound to RNA
  • ATRN RNA is bound by 38 proteins.  







eCLIP assay for ATRN is not avaliable on ENCORE database.





38 proteins are bound to ATRN RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2036316663631733+3'-UTR5.177547.11441K562PUM2
chr2036290313629095+3'-UTR3.053826.47639HepG2AKAP1
chr2036297123629754+3'-UTR3.406224.01314HepG2IGF2BP1
chr2036281943628287+3'-UTR3.3432216.40762HepG2PCBP2
chr2036305703630619+3'-UTR3.556733.95400K562UPF1
chr2036289543628995+3'-UTR4.060017.03532HepG2UPF1
chr2036290453629089+3'-UTR4.035784.57758HepG2FAM120A
chr2036303203630356+3'-UTR4.560015.94150HepG2UPF1
chr2036304913630516+3'-UTR3.947413.20319K562UPF1
chr2036286003628669+3'-UTR3.7477111.17775HepG2AKAP1
chr2036281713628282+3'-UTR3.1459030.42207HepG2UPF1
chr2036289603629000+3'-UTR4.338214.57758HepG2FAM120A
chr2036288523628895+3'-UTR3.453404.16779HepG2LIN28B
chr2036290363629116+3'-UTR3.868637.60345HepG2UPF1
chr2036302373630292+3'-UTR4.165178.16501HepG2UPF1
chr2036293883629517+3'-UTR3.603369.45698HepG2IGF2BP1
chr2036294203629485+3'-UTR3.9957810.22562HepG2UPF1
chr2036285303628591+3'-UTR3.699495.60771HepG2FAM120A
chr2036290953629141+3'-UTR3.439794.26759HepG2AKAP1
chr2036315093631556+3'-UTR4.461075.84664K562PUM2
chr2036308123630855+3'-UTR3.235123.94213HepG2LIN28B
chr2036277153627770+3'-UTR3.896355.82440HepG2AKAP1
chr2036299073630007+3'-UTR5.1363125.48184K562PUM2
chr2036316083631678+3'-UTR3.830035.34980HepG2FUBP3
chr2036302873630360+3'-UTR3.198713.68605HepG2AKAP1
chr2036291473629191+3'-UTR4.488605.48503HepG2LIN28B
chr2036315533631608+3'-UTR4.551288.47654HepG2FUBP3
chr2036297113629746+3'-UTR3.247214.92291HepG2UPF1
chr2036290173629077+3'-UTR4.169516.88279HepG2LIN28B
chr2036293913629485+3'-UTR4.513454.38226HepG2IGF2BP3
chr2036315253631589+3'-UTR3.490494.37595HepG2LARP4
chr2036315723631608+3'-UTR5.351514.37209K562PUM2
chr2036315053631550+3'-UTR3.101053.58640HepG2FUBP3
chr2036289583628997+3'-UTR4.010183.31330K562UPF1
chr2036305663630629+3'-UTR3.201615.97918HepG2UPF1
chr2036285273628600+3'-UTR3.489558.46839HepG2AKAP1
chr2036277113627776+3'-UTR4.9586614.22041HepG2UPF1
chr2036289453628997+3'-UTR3.733054.77155HepG2AKAP1
chr2036280363628085+3'-UTR3.502554.51064HepG2AKAP1
chr2036285183628596+3'-UTR4.4208019.30320HepG2UPF1
chr2036300533630113+3'-UTR3.836053.25175K562YBX3
chr2036277203627784+3'-UTR3.364093.37083K562UPF1
chr2036293983629451+3'-UTR3.768805.14978HepG2AKAP1
chr2036297813629847+3'-UTR3.764324.47204HepG2IGF2BP1
chr2036316203631679+3'-UTR4.345034.42548HepG2TIAL1
chr2036286043628672+3'-UTR4.1797415.91272HepG2UPF1
chr2036310843631144+3'-UTR3.252726.35161HepG2UPF1
chr2036286883628749+3'-UTR4.6135711.89503HepG2UPF1
chr2034517153451770+5'-UTR,CDS4.7662337.11014HepG2DDX3X
chr2034517003451791+5'-UTR,CDS4.962943.28019K562DDX3X
chr2035280003528092+CDS3.0906315.10664HepG2BCLAF1
chr2034518523451936+CDS3.5203117.10944HepG2DDX3X
chr2034519433451993+CDS3.8578620.64250HepG2NKRF
chr2035460133546055+CDS4.421284.53233HepG2ZNF800
chr2035770703577110+CDS,intron-Proximal5.384766.23016HepG2PRPF8
chr2034519933452050+CDS3.445018.21898HepG2NKRF
chr2035535143553552+CDS3.348367.13168HepG2BCLAF1
chr2036248663624911+CDS4.164205.23222HepG2SND1
chr2035655153565565+CDS,intron-Proximal4.788114.58968K562PRPF8
chr2035281153528135+CDS4.746449.30195HepG2BCLAF1
chr2035413163541363+CDS3.7225110.26109HepG2BCLAF1
chr2035413273541437+CDS3.265655.65286HepG2LIN28B
chr2035718503571913+CDS3.881335.58683HepG2GRWD1
chr2034520013452037+CDS4.8932812.02009HepG2DDX3X
chr2034518523451980+CDS3.5679810.46410HepG2RPS3
chr2035400413540087+CDS4.2090312.07231HepG2BCLAF1
chr2035816063581673+CDS,intron-Proximal3.784406.21348K562YBX3
chr2034519803452051+CDS6.091776.81676HepG2RPS3
chr2036273193627464+CDS,intron-Proximal3.785723.67894HepG2AQR
chr2034520823452137+CDS3.8878711.27718HepG2DDX3X
chr2035576263557692+CDS,intron-Proximal3.092277.13280HepG2PRPF8
chr2035428693542977+CDS,intron-Proximal3.587754.70265HepG2AQR
chr2035816313581664+CDS4.616744.67689HepG2PPIG
chr2035786023578646+CDS3.107405.74118K562YBX3
chr2035413803541440+CDS4.915955.85678HepG2EIF3H
chr2034521253452164+CDS3.501514.87412HepG2EIF3H
chr2035770393577070+CDS3.909144.71929HepG2PRPF8
chr2035429923543046+CDS3.3683514.18885HepG2BCLAF1
chr2035628743562923+CDS3.087036.06432HepG2SND1
chr2035654973565565+CDS,intron-Proximal4.025837.89388HepG2PRPF8
chr2035413813541459+CDS3.8053516.85915HepG2BCLAF1
chr2034520083452041+CDS3.396648.42792HepG2XPO5
chr2035718833571956+CDS,intron-Proximal3.366156.00907HepG2PPIG
chr2035298163529828+CDS,intron-Proximal4.461597.09561HepG2BCLAF1
chr2035209383520982+CDS3.7747310.37681HepG2BCLAF1
chr2035429293542992+CDS3.1921016.41828HepG2BCLAF1
chr2035535873553597+CDS4.122556.84316HepG2BCLAF1
chr2035264083526453+CDS,intron-Proximal3.104793.21639HepG2FASTKD2
chr2035208673520898+CDS,intron-Proximal3.665415.19413HepG2LIN28B
chr2035786223578647+CDS3.148224.45271HepG2YBX3
chr2035785653578622+CDS3.808077.02011HepG2YBX3
chr2035815683581696+CDS,intron-Proximal3.836775.89850HepG2AQR
chr2035429403542993+CDS3.357845.96765HepG2LIN28B
chr2035459953546044+CDS4.156824.55095K562YBX3
chr2034519463452001+CDS3.9925821.10905HepG2DDX3X
chr2035208983520939+CDS4.922706.07680HepG2LIN28B
chr2035564763556552+CDS3.662146.98305HepG2PPIG
chr2034517703451852+CDS4.3362036.66809HepG2DDX3X
chr2035414793541549+CDS3.070099.69173HepG2BCLAF1
chr2035655003565523+CDS3.478934.13746HepG2PPIG
chr2035815923581671+CDS,intron-Proximal3.291849.82350HepG2YBX3
chr2034856893485743+intron-Distal3.682613.34920HepG2HLTF
chr2035313273531390+intron-Distal4.3273015.09966HepG2SUGP2
chr2034683863468452+intron-Distal3.9256210.24855HepG2SUGP2
chr2034866323486747+intron-Distal4.5795611.27642HepG2HNRNPL
chr2034850213485074+intron-Distal3.419574.07970HepG2HLTF
chr2035323083532402+intron-Distal3.089483.57993HepG2MATR3
chr2034691943469254+intron-Distal3.283256.36326HepG2SUGP2
chr2035327383532761+intron-Distal4.346024.03915HepG2SUGP2
chr2034676383467709+intron-Distal3.413463.10961HepG2MATR3
chr2035341383534163+intron-Distal4.224053.79098HepG2SUGP2
chr2034834163483467+intron-Distal4.952196.81402HepG2HLTF
chr2034715673471627+intron-Distal4.0112012.09314HepG2SUGP2
chr2034618533461931+intron-Distal3.198533.44626HepG2PTBP1
chr2034686703468711+intron-Distal4.889757.39957HepG2SUGP2
chr2034714703471621+intron-Distal5.1358613.31436HepG2MATR3
chr2035327723532832+intron-Distal5.300217.87294HepG2MATR3
chr2036097193609823+intron-Distal3.824573.31570HepG2HNRNPK
chr2034716973471740+intron-Distal4.256538.66162HepG2SUGP2
chr2035887353588780+intron-Distal4.146474.28663HepG2SUGP2
chr2034720623472127+intron-Distal3.7994610.70638HepG2SUGP2
chr2034714703471567+intron-Distal5.5706624.15529HepG2SUGP2
chr2036054303605544+intron-Distal5.080567.48549HepG2RBFOX2
chr2034653303465400+intron-Distal4.224214.05620HepG2MATR3
chr2035883853588424+intron-Distal3.881213.54208HepG2SUGP2
chr2035232093523348+intron-Distal6.6432725.77195HepG2PCBP2
chr2035316523531733+intron-Distal6.2084616.33262HepG2SUGP2
chr2035335253533577+intron-Distal5.125028.67089HepG2SUGP2
chr2034705703470654+intron-Distal3.799784.48652HepG2PTBP1
chr2034706073470691+intron-Distal3.8140612.09314HepG2SUGP2
chr2035899453590030+intron-Distal4.039483.27829HepG2MATR3
chr2034587043458787+intron-Distal3.547653.00914HepG2PTBP1
chr2034720043472054+intron-Distal4.3916310.58275HepG2SUGP2
chr2034718203471861+intron-Distal4.286529.41683HepG2SUGP2
chr2035324733532576+intron-Distal4.4682015.26269HepG2SUGP2
chr2034688873468945+intron-Distal4.5218610.04921HepG2SUGP2
chr2035329503533020+intron-Distal3.490578.75882HepG2SUGP2
chr2034617553461813+intron-Distal3.985929.67032HepG2PTBP1
chr2034711613471230+intron-Distal3.539948.97638HepG2SUGP2
chr2034539983454132+intron-Distal4.385137.06575HepG2EXOSC5
chr2034702083470281+intron-Distal3.031575.51310HepG2MATR3
chr2034719373472004+intron-Distal3.6517312.99693HepG2SUGP2
chr2035967173596790+intron-Distal4.390814.84037HepG2CSTF2
chr2034819723482019+intron-Distal3.536294.45817HepG2HLTF
chr2034676403467730+intron-Distal3.619724.78196HepG2PTBP1
chr2034825323482584+intron-Distal3.504533.34920HepG2HLTF
chr2034710613471097+intron-Distal3.232316.35394HepG2SUGP2
chr2035313233531386+intron-Distal3.017283.01278HepG2MATR3
chr2034717673471810+intron-Distal5.4106611.33240HepG2SUGP2
chr2035314233531452+intron-Distal3.547505.06177HepG2SUGP2
chr2035317973531941+intron-Distal4.1847417.64483HepG2SUGP2
chr2035316143531677+intron-Distal4.657063.62238HepG2MATR3
chr2034708893470921+intron-Distal4.944227.14375HepG2SUGP2
chr2034617553461848+intron-Distal4.428283.91475K562PTBP1
chr2035336763533719+intron-Distal3.242795.36060HepG2SUGP2
chr2034830693483132+intron-Distal5.004537.12897HepG2HLTF
chr2034773623477410+intron-Distal3.958653.27946HepG2HNRNPM
chr2034716273471671+intron-Distal3.225386.05827HepG2SUGP2
chr2034707123470761+intron-Distal4.5251810.58275HepG2SUGP2
chr2034709563471007+intron-Distal4.170197.03506HepG2SUGP2
chr2034652303465280+intron-Distal3.931733.24322HepG2MATR3
chr2034709663471011+intron-Distal4.662905.01910HepG2MATR3
chr2035869673587074+intron-Distal3.945868.32287HepG2MATR3
chr2034858703485941+intron-Distal3.937496.73135HepG2HLTF
chr2034521933452299+intron-Distal,intron-Proximal3.141776.70274HepG2NKRF
chr2034691233469189+intron-Distal3.082755.54821HepG2SUGP2
chr2034702423470319+intron-Distal4.2941015.42976HepG2SUGP2
chr2034682423468274+intron-Distal3.638505.54651HepG2SUGP2
chr2034546743454733+intron-Distal4.099845.78025HepG2RBFOX2
chr2035872173587304+intron-Distal3.419616.79980HepG2SUGP2
chr2034730733473220+intron-Distal4.5986010.82907HepG2HNRNPM
chr2035993613599445+intron-Distal3.604974.28420HepG2HNRNPM
chr2035232213523351+intron-Distal3.954316.52594HepG2HNRNPK
chr2035870663587171+intron-Distal4.9027214.18076HepG2SUGP2
chr2035870743587174+intron-Distal3.716155.58751HepG2MATR3
chr2035332543533315+intron-Distal4.0513611.46951HepG2SUGP2
chr2035327613532854+intron-Distal4.5063822.29251HepG2SUGP2
chr2034687903468828+intron-Distal3.883597.03506HepG2SUGP2
chr2035323553532402+intron-Distal3.068785.68399HepG2SUGP2
chr2034905313490625+intron-Distal3.746957.41200HepG2HNRNPL
chr2035320923532152+intron-Distal3.361877.56541HepG2SUGP2
chr2035573403557418+intron-Distal,intron-Proximal5.455388.82480HepG2PTBP1
chr2034708153470856+intron-Distal3.449545.59320HepG2SUGP2
chr2035343843534470+intron-Distal3.001193.37220HepG2SUGP2
chr2034684533468505+intron-Distal4.436759.30950HepG2SUGP2
chr2034844513484520+intron-Distal4.734255.92514HepG2HLTF
chr2034716213471663+intron-Distal4.792965.72657HepG2MATR3
chr2034691153469171+intron-Distal4.790535.01910HepG2MATR3
chr2034722933472346+intron-Distal3.284896.59727HepG2SUGP2
chr2034684543468498+intron-Distal3.270763.34056HepG2MATR3
chr2035701593570240+intron-Distal3.323893.16095HepG2U2AF2
chr2035342663534318+intron-Distal3.214507.22569HepG2SUGP2
chr2035323073532394+intron-Distal4.7303917.66733HepG2PTBP1
chr2035232163523347+intron-Distal3.753245.50031HepG2DDX59
chr2034833243483368+intron-Distal3.080544.07970HepG2HLTF
chr2034719253471999+intron-Distal3.558228.32287HepG2MATR3
chr2034521693452243+intron-Proximal4.4028911.36931HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATRN is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATRN is not available on ENCORE database.

  • 99 RBPs can affect the levels of ATRN.  








The Knockdown/knockout RNA-Seq assay for ATRN is not available on ENCORE database.





99 RBPs can affect the gene expression of ATRN :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ATRNENSG00000088812.134178.305105843.66930-0.4840015.7162014.51880HepG2ACO1
ATRNENSG00000088812.137483.7806010324.44740-0.464204.116403.48500HepG2AKAP1
ATRNENSG00000088812.137095.302208894.89460-0.326102.427801.44910HepG2AKAP8
ATRNENSG00000088812.139408.953906431.152200.5489018.7727017.28190HepG2AUH
ATRNENSG00000088812.132416.754503665.89810-0.601105.745504.37400HepG2BCCIP
ATRNENSG00000088812.134032.945003185.486300.340202.761901.86350HepG2BCLAF1
ATRNENSG00000088812.135244.847504397.175800.254202.120501.59130HepG2BOP1
ATRNENSG00000088812.137379.191205154.878900.517409.929908.60310HepG2CALR
ATRNENSG00000088812.136553.835708116.08650-0.308402.578701.82970HepG2CIRBP
ATRNENSG00000088812.133799.151005841.81470-0.6207028.5495026.91720HepG2CKAP4
ATRNENSG00000088812.133713.116405857.22400-0.657604.803603.79030HepG2CNOT7
ATRNENSG00000088812.136809.676504036.808900.7543013.6772012.28500HepG2CPSF6
ATRNENSG00000088812.134412.710705404.28810-0.292405.393004.28180HepG2DDX19B
ATRNENSG00000088812.136314.167604903.792300.364604.947903.71790HepG2DDX24
ATRNENSG00000088812.137518.840709890.09330-0.395503.600102.89730HepG2DDX3X
ATRNENSG00000088812.132355.136803604.28330-0.613906.099505.00530HepG2DDX55
ATRNENSG00000088812.139476.206104584.105601.047609.349307.62240HepG2DDX59
ATRNENSG00000088812.137051.862605750.381100.294202.518301.55000HepG2DDX5
ATRNENSG00000088812.135685.011704006.642400.504707.202105.68920HepG2DHX30
ATRNENSG00000088812.133259.595804117.42810-0.337108.384607.32630HepG2DNAJC2
ATRNENSG00000088812.133843.581704839.53490-0.332402.789101.86520HepG2EEF2
ATRNENSG00000088812.132912.248503928.71250-0.431903.902802.83960HepG2EIF3D
ATRNENSG00000088812.1311470.078909025.796100.345602.578501.96070HepG2EIF4A3
ATRNENSG00000088812.133711.048208787.76330-1.2437019.3218017.62220HepG2EIF4B
ATRNENSG00000088812.136740.407005758.274500.227103.391002.47940HepG2EIF4G1
ATRNENSG00000088812.139814.529905516.086800.8312016.5905014.71750HepG2EIF4G2
ATRNENSG00000088812.139186.431907383.425800.315106.319205.47260HepG2ETF1
ATRNENSG00000088812.134610.203405709.79000-0.308603.403402.47570HepG2EWSR1
ATRNENSG00000088812.135710.147804774.389100.258102.465501.38300HepG2FASTKD2
ATRNENSG00000088812.136568.605004043.807300.699803.093302.01710HepG2FTO
ATRNENSG00000088812.137093.764905927.537800.259002.401001.66780HepG2FUBP3
ATRNENSG00000088812.134410.529206267.79240-0.507003.613702.33850HepG2FUS
ATRNENSG00000088812.134383.588009106.46630-1.0548022.3060020.54530HepG2FXR1
ATRNENSG00000088812.136094.228408447.67940-0.471104.528603.68630HepG2G3BP1
ATRNENSG00000088812.132826.207803498.03740-0.307702.598901.73530HepG2GEMIN5
ATRNENSG00000088812.136959.131904575.933100.604707.088406.09520HepG2GPKOW
ATRNENSG00000088812.136157.652404664.953500.400404.888103.98580HepG2HNRNPC
ATRNENSG00000088812.136815.429904325.902100.6557022.5841020.81240HepG2HNRNPF
ATRNENSG00000088812.133937.505108553.81520-1.1193029.4481027.43670HepG2HNRNPK
ATRNENSG00000088812.135993.263905316.999500.172602.844502.16320HepG2HNRNPL
ATRNENSG00000088812.139815.167104366.906701.1683029.4338027.73720HepG2HNRNPLL
ATRNENSG00000088812.132814.190604693.21530-0.7379016.4967014.50840HepG2HNRNPM
ATRNENSG00000088812.135338.116604634.111800.203902.987002.35920HepG2HNRNPU
ATRNENSG00000088812.137041.210309686.62670-0.460203.644002.23110HepG2HSPD1
ATRNENSG00000088812.136936.406204259.750800.7033016.2412014.64750HepG2IGF2BP1
ATRNENSG00000088812.137170.550708586.91590-0.260101.892001.32370HepG2IGF2BP2
ATRNENSG00000088812.134246.469007133.33930-0.748308.293106.85080HepG2LARP4
ATRNENSG00000088812.133148.258704418.95860-0.489206.141904.47560HepG2LARP7
ATRNENSG00000088812.133707.535604640.59730-0.323802.798601.57630HepG2LIN28B
ATRNENSG00000088812.135255.649209109.64470-0.7935012.4567011.10350HepG2MAGOH
ATRNENSG00000088812.134583.548909160.66020-0.9990017.1224015.65750HepG2MATR3
ATRNENSG00000088812.137449.865804453.905200.742006.413304.90380HepG2MTPAP
ATRNENSG00000088812.136097.976304622.790600.399504.672803.09840HepG2NAA15
ATRNENSG00000088812.137072.539109376.46930-0.406803.658102.93370HepG2NCBP2
ATRNENSG00000088812.137031.998003872.173700.8607018.0651016.35170HepG2NSUN2
ATRNENSG00000088812.137197.134005353.714700.426802.080801.32720HepG2PABPC1
ATRNENSG00000088812.134237.613608552.74820-1.0131058.8746056.75530HepG2PCBP1
ATRNENSG00000088812.134130.922905933.60130-0.522403.559702.38980HepG2PCBP2
ATRNENSG00000088812.132652.672003248.93150-0.292503.252701.91570HepG2PKM
ATRNENSG00000088812.136741.846604702.032600.5198015.1297013.54760HepG2PRPF4
ATRNENSG00000088812.134710.436008702.84370-0.8856044.6228042.98790HepG2PTBP1
ATRNENSG00000088812.134486.152205952.07070-0.407909.526208.49860HepG2PUS1
ATRNENSG00000088812.134897.613606171.26060-0.333504.729604.09810HepG2RBM22
ATRNENSG00000088812.133130.866404326.93270-0.466803.871802.61370HepG2RCC2
ATRNENSG00000088812.134980.445209685.34420-0.9595054.2907052.61200HepG2NELFE
ATRNENSG00000088812.135511.312409020.73650-0.7108031.4377029.78030HepG2RECQL
ATRNENSG00000088812.136837.312004660.473800.552903.380602.63590HepG2RPLP0
ATRNENSG00000088812.138828.243005624.193700.650405.065903.80920HepG2RPS10
ATRNENSG00000088812.132661.435203822.73880-0.522408.076207.09000HepG2RPS19
ATRNENSG00000088812.133746.567705016.37220-0.421104.079102.76330HepG2RPS5
ATRNENSG00000088812.137437.058304322.314800.7828015.4711013.94490HepG2SF3B1
ATRNENSG00000088812.136252.580309060.59960-0.5352018.3617017.04720HepG2SF3B4
ATRNENSG00000088812.137575.837805297.423700.5160020.9035019.32370HepG2SLBP
ATRNENSG00000088812.133371.821604812.64580-0.5133020.8398019.32430HepG2SMN1
ATRNENSG00000088812.134041.002305835.60520-0.530204.085802.90310HepG2SMNDC1
ATRNENSG00000088812.132898.405009457.37950-1.70620177.40310175.16880HepG2SRSF1
ATRNENSG00000088812.136517.865304250.152300.6168020.3603018.79120HepG2SRSF7
ATRNENSG00000088812.136245.939207694.14660-0.300806.645105.85620HepG2SRSF9
ATRNENSG00000088812.139452.301606052.177200.6431028.3416027.08860HepG2SSB
ATRNENSG00000088812.136407.172709649.46190-0.590806.319704.48390HepG2SSRP1
ATRNENSG00000088812.134532.589006203.89010-0.4528015.5101014.23080HepG2SUCLG1
ATRNENSG00000088812.136553.060904592.948100.512607.821806.29580HepG2SUPT6H
ATRNENSG00000088812.135929.952703588.097900.724709.887808.74000HepG2SUPV3L1
ATRNENSG00000088812.138490.808004256.658500.9961024.2210022.48840HepG2TARDBP
ATRNENSG00000088812.135661.922204502.915700.330304.605403.99480HepG2TIAL1
ATRNENSG00000088812.134140.282705749.16350-0.473603.230401.64460HepG2TRA2A
ATRNENSG00000088812.133848.807105819.01280-0.596408.682907.56360HepG2U2AF1
ATRNENSG00000088812.137091.110905713.130700.311602.334401.57040HepG2UBE2L3
ATRNENSG00000088812.132435.996303285.83480-0.431702.402501.47320HepG2UPF2
ATRNENSG00000088812.136329.745007374.26520-0.220403.191802.07480HepG2UTP18
ATRNENSG00000088812.135325.329806926.59630-0.379309.892908.87190HepG2UTP3
ATRNENSG00000088812.134570.314806297.23750-0.462403.082601.96260HepG2XRCC6
ATRNENSG00000088812.132615.463003532.08620-0.433503.848003.00170HepG2XRN2
ATRNENSG00000088812.137870.604104640.244100.7622044.8410042.81430HepG2ZC3H8
ATRNENSG00000088812.139326.721207890.461400.241206.214205.47940HepG2ZNF622
ATRNENSG00000088812.131090.18050846.375800.365102.467701.64690K562BOP1
ATRNENSG00000088812.13764.24880954.47780-0.320702.153701.40320K562FIP1L1
ATRNENSG00000088812.13684.06050832.41000-0.283202.199801.64860K562FXR1
ATRNENSG00000088812.131344.157601011.417700.410204.830603.64050K562HNRNPU
ATRNENSG00000088812.13968.391301294.12520-0.418303.656902.74620K562HSPD1
ATRNENSG00000088812.13980.92390733.687000.418902.300601.45780K562KRR1
ATRNENSG00000088812.13632.25050813.99220-0.364502.486701.56170K562PCBP2
ATRNENSG00000088812.13846.950701083.46350-0.355302.617301.82210K562PPIG
ATRNENSG00000088812.13721.56880888.80620-0.300702.192401.58980K562PTBP1
ATRNENSG00000088812.131406.448001734.09910-0.302102.006401.31060K562PUF60
ATRNENSG00000088812.13500.35540691.24880-0.466302.787601.96830K562RPS19
ATRNENSG00000088812.13450.85890871.31400-0.9505014.0206012.42450K562SRSF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ATRN is not available on ENCORE database.





5 RBPs can affect the splicing of ATRN :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSATRNENSG00000088812.13chr20+355922835594193559325355941935575053557644-0.179000.000000.00000shorterHepG2SRSF1
A3SSATRNENSG00000088812.13chr20+356529335655273565460356552735645443564730-0.119000.000800.07338shorterHepG2SRSF1
A3SSATRNENSG00000088812.13chr20+3562760356300135627813563001355922835594190.085000.008450.04576longerK562AQR
A3SSATRNENSG00000088812.13chr20+355922835594193559325355941935575053557644-0.052000.000860.09360shorterHepG2PCBP1
MXEATRNENSG00000088812.13chr20+352086835209823526408352653735158993515983352793035281360.378000.000000.000001includedHepG2U2AF2
MXEATRNENSG00000088812.13chr20+352086835209823526408352653735158993515983352793035281360.283000.000040.001611includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ATRN is not avaliable on ENCORE database.