PLEKHA1

General Information

Gene Name : PLEKHA1
Gene ID : ENSG00000107679.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PLEKHA1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PLEKHA1	ENSG00000107679.14	0.38	0.34	0.36	ENCSR000AEF
HepG2	PLEKHA1	ENSG00000107679.14	15.38	26.09	20.73	ENCSR985KAT
K562	PLEKHA1	ENSG00000107679.14	0.37	0.46	0.42	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PLEKHA1 is not avaliable on ENCORE database.

Proteins bound to RNA

PLEKHA1 RNA is bound by 28 proteins.

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eCLIP assay for PLEKHA1 is not avaliable on ENCORE database.

28 proteins are bound to PLEKHA1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	124189103	124189203	+	3'-UTR,CDS,intron-Proximal	4.52736	27.99559	HepG2	AQR
chr10	124172516	124172564	+	CDS,intron-Proximal	3.91242	22.54511	HepG2	BCLAF1
chr10	124188049	124188095	+	intron-Distal	4.99696	20.53444	HepG2	QKI
chr10	124188190	124188238	+	intron-Distal	5.35684	20.18675	HepG2	QKI
chr10	124187979	124188039	+	intron-Distal,intron-Proximal	4.43942	19.72570	HepG2	QKI
chr10	124186515	124186591	+	CDS,intron-Proximal	3.84662	17.58616	HepG2	PRPF8
chr10	124188095	124188137	+	intron-Distal	5.64425	17.43049	HepG2	QKI
chr10	124152797	124152861	+	CDS,intron-Proximal	3.67666	17.41340	HepG2	BCLAF1
chr10	124175373	124175423	+	CDS,intron-Proximal	3.39820	17.16575	HepG2	BCLAF1
chr10	124134227	124134326	+	5'-UTR,intron-Proximal	6.15642	16.95812	HepG2	NCBP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 101 entries

eCLIP assay for PLEKHA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PLEKHA1 is not available on ENCORE database.
100 RBPs can affect the levels of PLEKHA1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PLEKHA1 is not available on ENCORE database.

100 RBPs can affect the gene expression of PLEKHA1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PLEKHA1	ENSG00000107679.10	5019.03990	2378.77740	1.07710	65.42370	63.82240	HepG2	SRFBP1
PLEKHA1	ENSG00000107679.10	1364.52300	3134.24220	-1.19970	54.82150	53.13850	HepG2	NELFE
PLEKHA1	ENSG00000107679.10	1455.03270	3060.45390	-1.07270	48.76520	47.31720	HepG2	SRSF1
PLEKHA1	ENSG00000107679.10	1077.64600	3111.00060	-1.52950	32.75510	30.75900	HepG2	MATR3
PLEKHA1	ENSG00000107679.10	1051.24180	1977.35910	-0.91150	29.37840	27.74140	HepG2	UTP3
PLEKHA1	ENSG00000107679.10	1206.79300	3093.67730	-1.35810	29.55630	27.59440	HepG2	MAGOH
PLEKHA1	ENSG00000107679.10	3703.02330	2194.72420	0.75460	26.01200	24.29790	HepG2	AUH
PLEKHA1	ENSG00000107679.10	1199.22230	3065.19120	-1.35390	25.49240	23.59420	HepG2	EIF4A3
PLEKHA1	ENSG00000107679.10	1788.47690	1021.35600	0.80810	24.99090	23.33670	HepG2	ZC3H8
PLEKHA1	ENSG00000107679.10	1268.84830	2110.54190	-0.73410	19.85770	18.07240	HepG2	AKAP8L
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 105 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PLEKHA1 is not available on ENCORE database.

20 RBPs can affect the splicing of PLEKHA1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	PLEKHA1	ENSG00000107679.10	chr10	+	124187791	124187936	124186457	124186547	124189139	124189638	-0.28000	0.00000	excluded	HepG2	U2AF1
SE	PLEKHA1	ENSG00000107679.10	chr10	+	124187791	124187936	124186457	124186547	124189139	124189638	-0.35000	0.00000	excluded	HepG2	HNRNPM
SE	PLEKHA1	ENSG00000107679.10	chr10	+	124187791	124187936	124186457	124186547	124189139	124189638	-0.31300	0.00232	excluded	HepG2	TRA2A
SE	PLEKHA1	ENSG00000107679.10	chr10	+	124187791	124187936	124186457	124186547	124189139	124189638	-0.30300	0.00000	excluded	HepG2	QKI
SE	PLEKHA1	ENSG00000107679.10	chr10	+	124187791	124187832	124186457	124186547	124189139	124191861	-0.48100	0.00000	excluded	HepG2	DDX3X
SE	PLEKHA1	ENSG00000107679.10	chr10	+	124187791	124187832	124186457	124186547	124189139	124191861	-0.50100	0.00000	excluded	HepG2	NCBP2
SE	PLEKHA1	ENSG00000107679.10	chr10	+	124187791	124187936	124186457	124186547	124189139	124189638	-0.19300	0.00031	excluded	HepG2	SFPQ
SE	PLEKHA1	ENSG00000107679.10	chr10	+	124187791	124187936	124186457	124186547	124189139	124189638	0.34400	0.00013	included	HepG2	PTBP1
SE	PLEKHA1	ENSG00000107679.10	chr10	+	124187791	124187832	124186457	124186547	124189139	124191861	-0.46600	0.00000	excluded	HepG2	SSB
SE	PLEKHA1	ENSG00000107679.10	chr10	+	124187791	124187832	124186457	124186547	124189139	124191866	-0.42200	0.00009	excluded	HepG2	DDX55

Showing 1 to 10 of 20 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PLEKHA1

General Information

Functions

Localization

Domains (AlphaFold: PLEKHA1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PLEKHA1 is not avaliable on ENCORE database.

28 proteins are bound to PLEKHA1 RNA:

eCLIP assay for PLEKHA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PLEKHA1 is not available on ENCORE database.

100 RBPs can affect the gene expression of PLEKHA1 :

The Knockdown/knockout RNA-Seq assay for PLEKHA1 is not available on ENCORE database.

20 RBPs can affect the splicing of PLEKHA1 :

The Knockdown/knockout RNA-Seq assay for PLEKHA1 is not avaliable on ENCORE database.