BMS1P20

General Information

Gene Name       : BMS1P20
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BMS1P20)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BMS1P20 is not avaliable on ENCORE database.



Proteins bound to RNA
  • BMS1P20 RNA is bound by 10 proteins.  







eCLIP assay for BMS1P20 is not avaliable on ENCORE database.





10 proteins are bound to BMS1P20 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr222266057022660650+intron-Distal4.022875.80937K562EXOSC5
chr222266134322661423+intron-Distal,intron-Proximal4.5974511.83008HepG2PRPF8
chr222265895122658996+intron-Distal4.873096.73731K562EXOSC5
chr222265951322659559+intron-Distal3.618216.13018K562EXOSC5
chr222265935022659390+intron-Distal3.934355.20902K562EXOSC5
chr222266018222660233+intron-Distal3.979455.20960K562EXOSC5
chr222265895322659011+intron-Distal4.425093.86368HepG2HNRNPM
chr222265975022659841+intron-Distal4.888934.05245HepG2EXOSC5
chr222265895022659009+intron-Distal5.478527.65271K562HNRNPM
chr222265955922659601+intron-Distal5.203188.04096K562EXOSC5
chr222265830522658381+intron-Proximal5.332829.47372K562TRA2A
chr222265830622658362+intron-Proximal3.031254.78328K562ZNF622
chr222266122722661322+intron-Proximal4.2738718.25679K562UCHL5
chr222266402822664079+intron-Proximal4.499056.28383K562KHSRP
chr222266159222661658+intron-Proximal3.149748.91678K562UCHL5
chr222266122222661282+intron-Proximal3.665304.09885HepG2BCLAF1
chr222266159322661657+intron-Proximal3.382923.60157HepG2GRWD1
chr222266130022661342+intron-Proximal4.120074.26679K562GRWD1
chr222266130222661339+intron-Proximal3.073673.05161HepG2PPIG
chr222265830722658325+intron-Proximal4.111265.57819K562UCHL5
chr222265761222657663+intron-Proximal4.465104.29290K562TRA2A
chr222266124122661339+intron-Proximal3.216824.89942HepG2GRWD1
chr222266128222661347+intron-Proximal4.859826.13315HepG2BCLAF1
chr222266158622661648+intron-Proximal3.2283312.86496K562ZNF622
chr222266165322661702+intron-Proximal3.779033.42844K562KHSRP
chr222266121422661322+intron-Proximal3.4332015.69375K562ZNF622
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BMS1P20 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BMS1P20 is not available on ENCORE database.

  • 22 RBPs can affect the levels of BMS1P20.  








The Knockdown/knockout RNA-Seq assay for BMS1P20 is not available on ENCORE database.





22 RBPs can affect the gene expression of BMS1P20 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BMS1P20ENSG00000236850.4157.45280105.414200.578801.950001.44010HepG2BOP1
BMS1P20ENSG00000236850.496.8939054.067000.841602.011101.36390HepG2CNOT7
BMS1P20ENSG00000236850.488.0570050.507300.801802.025501.43460HepG2DDX21
BMS1P20ENSG00000236850.473.5186039.374600.900702.020701.50460HepG2EIF2S1
BMS1P20ENSG00000236850.4110.2026043.523301.340205.089904.22500HepG2EIF4A3
BMS1P20ENSG00000236850.496.0429042.357401.181003.193702.45740HepG2EIF4B
BMS1P20ENSG00000236850.4183.5217098.472800.898105.008904.24250HepG2ETF1
BMS1P20ENSG00000236850.497.3583041.400601.233604.032603.23140HepG2IGF2BP2
BMS1P20ENSG00000236850.498.8346043.898801.170703.771303.00550HepG2MAGOH
BMS1P20ENSG00000236850.490.5498044.149301.036202.699402.07540HepG2MATR3
BMS1P20ENSG00000236850.479.7323045.193200.819001.849801.32570HepG2NCBP2
BMS1P20ENSG00000236850.4131.8913090.554000.542401.851801.34570HepG2PUM1
BMS1P20ENSG00000236850.4145.8445090.491400.688502.398801.77390HepG2PUM2
BMS1P20ENSG00000236850.4143.9479082.309000.806303.399202.84150HepG2RBM22
BMS1P20ENSG00000236850.481.4155042.969700.921902.292401.74730HepG2SF3B4
BMS1P20ENSG00000236850.495.6718044.845501.093003.246302.74490HepG2SRSF1
BMS1P20ENSG00000236850.4126.2751081.662500.628702.061801.52930HepG2UTP3
BMS1P20ENSG00000236850.4232.38700147.957100.651203.313502.65990K562FXR1
BMS1P20ENSG00000236850.4194.68840304.01810-0.643003.622902.71890K562GPKOW
BMS1P20ENSG00000236850.4339.19600234.258000.533902.365701.85510K562PUS1
BMS1P20ENSG00000236850.4212.40230144.084000.559802.345801.35360K562SAFB
BMS1P20ENSG00000236850.4213.92830144.315200.567802.432601.63310K562SF3B4
BMS1P20ENSG00000236850.4253.21110162.204900.642403.597702.66200K562SYNCRIP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BMS1P20 is not available on ENCORE database.






No RBPs affect the alternative splcing events of BMS1P20 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for BMS1P20 is not avaliable on ENCORE database.