SYT7

General Information

Gene Name       : SYT7
Gene ID             : ENSG00000011347.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SYT7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SYT7ENSG00000011347.90.000.000.00ENCSR000AEF
HepG2SYT7ENSG00000011347.96.732.854.79ENCSR985KAT
K562SYT7ENSG00000011347.90.150.140.15ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SYT7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SYT7 RNA is bound by 3 proteins.  







eCLIP assay for SYT7 is not avaliable on ENCORE database.





3 proteins are bound to SYT7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr116128408261284182-3'-UTR,intron-Distal4.286804.20997HepG2UPF1
chr116131174961311875-intron-Distal4.273557.55717HepG2PTBP1
chr116130360461303680-intron-Distal4.274275.53837HepG2XPO5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SYT7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SYT7 is not available on ENCORE database.

  • 113 RBPs can affect the levels of SYT7.  








The Knockdown/knockout RNA-Seq assay for SYT7 is not available on ENCORE database.





113 RBPs can affect the gene expression of SYT7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SYT7ENSG00000011347.5132.61150217.21460-0.711903.297502.13430HepG2AATF
SYT7ENSG00000011347.573.50060382.82190-2.3808010.916809.87600HepG2ACO1
SYT7ENSG00000011347.536.83570689.96710-4.2273043.9351042.19240HepG2AKAP1
SYT7ENSG00000011347.5855.06260570.844500.582804.623303.62130HepG2ASCC1
SYT7ENSG00000011347.5450.87480275.109600.712606.988805.97800HepG2AUH
SYT7ENSG00000011347.5251.57550115.884801.118206.171304.89030HepG2BCLAF1
SYT7ENSG00000011347.5339.18300158.158801.100606.135305.28450HepG2BOP1
SYT7ENSG00000011347.5563.36640994.31770-0.819605.266602.59470HepG2CDC40
SYT7ENSG00000011347.5334.53120542.35630-0.697104.118903.18640HepG2CIRBP
SYT7ENSG00000011347.594.60200414.28690-2.1307011.394909.88070HepG2CNOT7
SYT7ENSG00000011347.5411.46650145.185201.5028016.3911014.88400HepG2CPSF6
SYT7ENSG00000011347.5227.04920155.971700.541602.660801.66480HepG2YBX3
SYT7ENSG00000011347.5371.17710221.284400.746106.986205.88710HepG2DAZAP1
SYT7ENSG00000011347.5136.11240353.98430-1.378905.581104.44830HepG2DDX19B
SYT7ENSG00000011347.580.53900156.18600-0.955504.437602.98850HepG2DDX1
SYT7ENSG00000011347.555.68010239.44890-2.1045019.8660018.25300HepG2DDX21
SYT7ENSG00000011347.5187.12760660.83900-1.8203017.0657015.65230HepG2DDX3X
SYT7ENSG00000011347.573.43670131.14290-0.836602.719001.95090HepG2DDX55
SYT7ENSG00000011347.5603.30660164.872801.8714017.3336015.10490HepG2DDX59
SYT7ENSG00000011347.5775.06540377.815301.036503.413002.29990HepG2DDX5
SYT7ENSG00000011347.5276.17040147.712500.902706.229604.80050HepG2DHX30
SYT7ENSG00000011347.5685.21970366.216800.903808.314607.26350HepG2DKC1
SYT7ENSG00000011347.5297.67610153.147800.958708.141006.98750HepG2DNAJC21
SYT7ENSG00000011347.5255.02280151.802300.748305.483004.61080HepG2DNAJC2
SYT7ENSG00000011347.5115.19010232.23570-1.011604.846803.65800HepG2EEF2
SYT7ENSG00000011347.5336.47440220.640500.608702.409401.38070HepG2AGO1
SYT7ENSG00000011347.51004.66040545.712000.880409.915508.83510HepG2EIF2S1
SYT7ENSG00000011347.5212.79550334.60320-0.653004.372902.91260HepG2EIF2S2
SYT7ENSG00000011347.573.97290188.48940-1.349407.417305.99960HepG2EIF3D
SYT7ENSG00000011347.5873.018301212.08060-0.473403.575201.57160HepG2EIF3H
SYT7ENSG00000011347.5318.99460587.28190-0.880505.080604.16700HepG2EIF4B
SYT7ENSG00000011347.5378.08350218.309800.792207.270106.02720HepG2EIF4G1
SYT7ENSG00000011347.5411.49470209.126900.976402.717501.90960HepG2EIF4G2
SYT7ENSG00000011347.5108.34140445.51760-2.0399022.9867021.16330HepG2FIP1L1
SYT7ENSG00000011347.5219.89340520.44320-1.242906.998805.78470HepG2FUBP3
SYT7ENSG00000011347.5122.06950256.56240-1.071606.058404.45450HepG2FUS
SYT7ENSG00000011347.5221.81730608.70020-1.4564012.1887010.84000HepG2FXR1
SYT7ENSG00000011347.5346.62380564.48360-0.703603.043802.34750HepG2G3BP1
SYT7ENSG00000011347.5111.45800182.55670-0.711802.524701.55800HepG2GNB2L1
SYT7ENSG00000011347.5857.34610164.542502.3813037.7439035.69570HepG2GPKOW
SYT7ENSG00000011347.5232.05900383.58290-0.725002.459301.40950HepG2GRSF1
SYT7ENSG00000011347.5678.80040157.293702.1094054.5518052.19150HepG2HNRNPF
SYT7ENSG00000011347.5824.26790157.029202.3920048.4412046.31360HepG2HNRNPLL
SYT7ENSG00000011347.5160.77770307.29730-0.934607.267905.83740HepG2HNRNPM
SYT7ENSG00000011347.5593.69430154.885701.938406.040705.01230HepG2IGF2BP1
SYT7ENSG00000011347.5165.67570538.66510-1.701008.410506.76870HepG2IGF2BP3
SYT7ENSG00000011347.5237.14220174.512900.442302.179301.51960HepG2ILF2
SYT7ENSG00000011347.5525.48330349.851100.586802.373701.42840HepG2KIF1C
SYT7ENSG00000011347.5254.75100608.91420-1.257209.033007.86180HepG2MAGOH
SYT7ENSG00000011347.5353.22220612.26810-0.793605.320304.46990HepG2MATR3
SYT7ENSG00000011347.5156.56490360.42880-1.2030011.8806010.32290HepG2MSI2
SYT7ENSG00000011347.5445.40140160.228601.474906.407004.89930HepG2MTPAP
SYT7ENSG00000011347.5415.59720302.687800.457302.470801.32650HepG2NAA15
SYT7ENSG00000011347.5225.21030626.64640-1.4764012.7301011.42750HepG2NCBP2
SYT7ENSG00000011347.5262.36360161.750600.697703.397501.83270HepG2NIP7
SYT7ENSG00000011347.5574.68560837.21160-0.542803.163701.63410HepG2NKRF
SYT7ENSG00000011347.5487.70280139.262701.8081023.4326021.56930HepG2NSUN2
SYT7ENSG00000011347.571.77690169.10510-1.236307.667106.37010HepG2PARN
SYT7ENSG00000011347.5329.82920581.89280-0.819005.830805.00170HepG2PCBP1
SYT7ENSG00000011347.5154.92630242.86040-0.648502.644401.62960HepG2PCBP2
SYT7ENSG00000011347.5315.65190152.380301.050607.463806.29570HepG2PPIL4
SYT7ENSG00000011347.5531.93250252.885101.0727012.1820010.72840HepG2PRPF4
SYT7ENSG00000011347.556.60740101.13890-0.837302.323401.58000HepG2PRPF8
SYT7ENSG00000011347.5177.73820592.15610-1.7362018.3054017.13200HepG2PTBP1
SYT7ENSG00000011347.51110.83320209.460202.4068072.2904069.83390HepG2PUF60
SYT7ENSG00000011347.5117.47540222.35090-0.920506.496105.66700HepG2PUM1
SYT7ENSG00000011347.5976.53400222.188702.1358061.1356058.39220HepG2PUM2
SYT7ENSG00000011347.5114.00930234.32570-1.039404.260103.39450HepG2RAVER1
SYT7ENSG00000011347.5448.96100578.21850-0.365002.526801.70450HepG2RBM15
SYT7ENSG00000011347.5103.73390264.00050-1.3477011.5309010.62670HepG2RBM22
SYT7ENSG00000011347.5804.22960581.972800.466604.209703.39320HepG2RBM25
SYT7ENSG00000011347.5522.94580202.813501.366404.785502.53870HepG2RBM39
SYT7ENSG00000011347.573.47070175.18540-1.253606.288004.68720HepG2RCC2
SYT7ENSG00000011347.5277.00680658.96430-1.2503011.1739010.22430HepG2NELFE
SYT7ENSG00000011347.5343.23740613.82370-0.838606.949206.03720HepG2RECQL
SYT7ENSG00000011347.5533.63740169.497901.6545022.7412021.17210HepG2RPLP0
SYT7ENSG00000011347.5576.77280230.252601.3247011.9442010.12610HepG2RPS10
SYT7ENSG00000011347.5105.20720183.44270-0.802103.837103.12390HepG2RPS19
SYT7ENSG00000011347.590.45370198.94810-1.137106.589005.38560HepG2RPS2
SYT7ENSG00000011347.5122.02700203.09870-0.735003.477502.26870HepG2RPS5
SYT7ENSG00000011347.5272.59540152.144300.841206.547605.61940HepG2SAFB2
SYT7ENSG00000011347.5166.16480564.91250-1.7654021.9969020.05580HepG2SF3A3
SYT7ENSG00000011347.5474.02920155.406901.6088020.1697018.45760HepG2SF3B1
SYT7ENSG00000011347.5335.19410616.40620-0.878906.003205.18940HepG2SF3B4
SYT7ENSG00000011347.5600.17750200.838901.5793021.3880019.79640HepG2SLBP
SYT7ENSG00000011347.5117.79790177.42370-0.590902.631302.00070HepG2SMN1
SYT7ENSG00000011347.5351.17590228.237400.621603.133001.43500HepG2SND1
SYT7ENSG00000011347.5389.12000199.369500.964702.727401.42670HepG2SNRNP200
SYT7ENSG00000011347.5129.48570643.43730-2.3130026.2534025.12160HepG2SRSF1
SYT7ENSG00000011347.5304.97830167.277900.866404.315603.03730HepG2SRSF3
SYT7ENSG00000011347.5565.84400154.548301.8722039.3610037.37090HepG2SRSF7
SYT7ENSG00000011347.5712.41880523.507300.444405.040104.33650HepG2SRSF9
SYT7ENSG00000011347.5594.71040258.893301.1997021.4603020.32730HepG2SSB
SYT7ENSG00000011347.5678.74390297.444301.190105.828704.10730HepG2STAU1
SYT7ENSG00000011347.5164.72220235.20150-0.513902.488101.89230HepG2SUCLG1
SYT7ENSG00000011347.5609.98260300.711301.0203012.6955010.80280HepG2SUPT6H
SYT7ENSG00000011347.5369.44970130.542801.5008011.6807010.45050HepG2SUPV3L1
SYT7ENSG00000011347.5202.26670578.46520-1.5160012.2023011.15330HepG2TAF15
SYT7ENSG00000011347.5290.26580153.151000.922304.278603.40280HepG2TARDBP
SYT7ENSG00000011347.5400.37950864.69160-1.110806.642305.06810HepG2TBRG4
SYT7ENSG00000011347.5348.99870165.999901.071906.819006.09720HepG2TIAL1
SYT7ENSG00000011347.5310.21630204.633100.600103.400402.42110HepG2TUFM
SYT7ENSG00000011347.588.82350381.02930-2.1009025.1891023.23240HepG2U2AF1
SYT7ENSG00000011347.573.74990232.02630-1.653604.836103.50430HepG2U2AF2
SYT7ENSG00000011347.5690.84910500.992500.463502.727402.03200HepG2UPF1
SYT7ENSG00000011347.5404.22310514.93870-0.349202.359501.38070HepG2UTP18
SYT7ENSG00000011347.5120.04720483.68620-2.0105035.1097033.33760HepG2UTP3
SYT7ENSG00000011347.570.03200257.73540-1.8798015.0299012.78390HepG2XRCC6
SYT7ENSG00000011347.5210.18750128.505300.709702.552901.85490HepG2XRN2
SYT7ENSG00000011347.533.2959010.593701.652002.560102.00970K562AGGF1
SYT7ENSG00000011347.558.9516015.675901.910904.122803.20350K562GRSF1
SYT7ENSG00000011347.580.3982027.521601.546504.465503.41060K562PCBP3
SYT7ENSG00000011347.557.4748021.106801.445103.568202.65180K562POLR2G
SYT7ENSG00000011347.533.719508.320002.018803.035102.08220K562PSIP1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SYT7 is not available on ENCORE database.





2 RBPs can affect the splicing of SYT7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESYT7ENSG00000011347.5chr11-6131464861314780613004606130059661318855613189350.395000.001490.06928includedHepG2PTBP1
SESYT7ENSG00000011347.5chr11-6131464861314780613004606130059661318855613189350.207000.002180.07473includedHepG2MATR3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SYT7 is not avaliable on ENCORE database.