USH1C

General Information

Gene Name : USH1C
Gene ID : ENSG00000006611.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: USH1C)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Average TPM	Experiment ID
Gm12878	USH1C	ENSG00000006611.15	0.00	0.00	ENCSR000AEF
HepG2	USH1C	ENSG00000006611.15	0.00	0.00	ENCSR985KAT
K562	USH1C	ENSG00000006611.15	0.04	0.02	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary

RNA Targets

eCLIP assay for USH1C is not avaliable on ENCORE database.

Proteins bound to RNA

NO known proteins bind on USH1C RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for USH1C is not avaliable on ENCORE database.

NO known proteins are bound to USH1C RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for USH1C is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for USH1C is not available on ENCORE database.
3 RBPs can affect the levels of USH1C.

The Knockdown/knockout RNA-Seq assay for USH1C is not available on ENCORE database.

3 RBPs can affect the gene expression of USH1C :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
USH1C	ENSG00000006611.11	15.48240	0.94370	4.03610	2.77830	1.96870	HepG2	MSI2
USH1C	ENSG00000006611.11	20.61420	1.77970	3.53380	4.38190	3.65200	HepG2	PUF60
USH1C	ENSG00000006611.11	10.54020	0.62090	4.08520	2.24140	1.66910	HepG2	QKI
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

USH1C

General Information

Functions

Localization

Domains (AlphaFold: USH1C)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for USH1C is not avaliable on ENCORE database.

NO known proteins are bound to USH1C RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for USH1C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for USH1C is not available on ENCORE database.

3 RBPs can affect the gene expression of USH1C :

The Knockdown/knockout RNA-Seq assay for USH1C is not available on ENCORE database.

No RBPs affect the alternative splcing events of USH1C on ENCORE database.

The Knockdown/knockout RNA-Seq assay for USH1C is not avaliable on ENCORE database.