NDUFA1

General Information

Gene Name       : NDUFA1
Gene ID             : ENSG00000125356.6
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NDUFA1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NDUFA1ENSG00000125356.668.7178.6473.67ENCSR000AEF
HepG2NDUFA1ENSG00000125356.697.2482.8790.06ENCSR985KAT
K562NDUFA1ENSG00000125356.6137.73109.09123.41ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NDUFA1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NDUFA1 RNA is bound by 15 proteins.  







eCLIP assay for NDUFA1 is not avaliable on ENCORE database.





15 proteins are bound to NDUFA1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX119010476119010516+3'-UTR,CDS,intron-Proximal4.8990918.42218K562RPS3
chrX119010534119010593+3'-UTR5.5788619.58757HepG2SUB1
chrX119010476119010514+3'-UTR,CDS,intron-Proximal4.4975832.36819K562PABPC4
chrX119010509119010587+3'-UTR4.6797522.29993HepG2LARP4
chrX119010476119010502+3'-UTR,CDS,intron-Proximal5.8093115.65443HepG2SUB1
chrX119010528119010568+3'-UTR6.8732665.31128K562PABPC4
chrX119010529119010570+3'-UTR3.555324.27595K562NOLC1
chrX119010568119010602+3'-UTR5.9536037.09891K562PABPC4
chrX119010586119010605+3'-UTR5.403763.28952K562LARP4
chrX119010544119010578+3'-UTR4.371927.96199K562APOBEC3C
chrX119010532119010566+3'-UTR4.602456.19646K562LARP4
chrX119010566119010586+3'-UTR4.843184.75666K562LARP4
chrX119010476119010509+3'-UTR,CDS,intron-Proximal3.202597.14424HepG2LARP4
chrX119010476119010519+3'-UTR,CDS,intron-Proximal3.612915.29764K562SND1
chrX119005848119005914+5'-UTR,CDS3.1914112.05620K562APOBEC3C
chrX119005847119005953+5'-UTR,CDS4.219915.53515K562EIF3G
chrX119005847119005878+5'-UTR,CDS4.4419436.37237K562DDX3X
chrX119005867119005924+5'-UTR,CDS3.6477219.85617K562DROSHA
chrX119005857119005874+5'-UTR3.854876.81198K562RPS3
chrX119005870119005951+5'-UTR,CDS3.339198.07122HepG2DDX55
chrX119005850119005959+5'-UTR,CDS3.4156823.86464K562GEMIN5
chrX119005879119005973+CDS4.1174111.93682HepG2RPS3
chrX119007268119007342+CDS3.355525.05991K562FUS
chrX119005894119005958+CDS4.9891958.91945K562RPS3
chrX119007321119007355+CDS4.4371822.58173K562RPS3
chrX119007267119007279+CDS4.120823.36385K562UCHL5
chrX119005880119005969+CDS3.142169.32304HepG2DDX3X
chrX119007340119007356+CDS5.5228411.71197HepG2SUB1
chrX119007279119007352+CDS4.2154314.71174K562APOBEC3C
chrX119010476119010494+CDS,intron-Proximal3.287524.49644K562APOBEC3C
chrX119007292119007357+CDS,intron-Proximal3.593938.28098HepG2LARP4
chrX119007287119007303+CDS4.654028.35382K562RPS3
chrX119005906119005925+CDS3.442068.83294K562PABPC4
chrX119005916119005951+CDS3.3206711.45245HepG2SUB1
chrX119005909119005959+CDS4.7959712.34078HepG2LARP4
chrX119005878119005975+CDS3.31559400.00000K562DDX3X
chrX119007280119007331+CDS3.5046411.68376K562DDX55
chrX119006007119006018+intron-Proximal3.553545.35619K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NDUFA1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NDUFA1 is not available on ENCORE database.

  • 85 RBPs can affect the levels of NDUFA1.  








The Knockdown/knockout RNA-Seq assay for NDUFA1 is not available on ENCORE database.





85 RBPs can affect the gene expression of NDUFA1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NDUFA1ENSG00000125356.6918.282701083.98850-0.239302.060701.52120HepG2ACO1
NDUFA1ENSG00000125356.61463.498201747.76670-0.256102.816602.12510HepG2AUH
NDUFA1ENSG00000125356.61300.375101004.863500.371802.573901.67280HepG2BCCIP
NDUFA1ENSG00000125356.6449.96030663.64890-0.560603.560702.03200HepG2DDX52
NDUFA1ENSG00000125356.6504.06560879.17340-0.802504.768503.49650HepG2DDX59
NDUFA1ENSG00000125356.61129.718901485.78420-0.395302.629002.02680HepG2DDX6
NDUFA1ENSG00000125356.6623.02620853.21100-0.453603.514202.19790HepG2EIF2S2
NDUFA1ENSG00000125356.6701.88270996.45930-0.505605.357303.91630HepG2EIF3G
NDUFA1ENSG00000125356.61179.238101536.84610-0.382102.011601.41950HepG2EIF4B
NDUFA1ENSG00000125356.61286.247401762.08060-0.454107.460106.20640HepG2EIF4G1
NDUFA1ENSG00000125356.61264.381802006.71750-0.6664016.0854014.83230HepG2ETF1
NDUFA1ENSG00000125356.6884.184101219.23740-0.463604.513503.52360HepG2FUBP3
NDUFA1ENSG00000125356.61129.060501568.42020-0.474204.103803.01000HepG2G3BP2
NDUFA1ENSG00000125356.6345.99850572.26280-0.725905.728104.43640HepG2GEMIN5
NDUFA1ENSG00000125356.6562.42540877.54940-0.641803.904503.15490HepG2GPKOW
NDUFA1ENSG00000125356.61142.892201501.70070-0.393902.867402.18210HepG2IGF2BP2
NDUFA1ENSG00000125356.6858.231801593.15620-0.8924011.8062010.48500HepG2MAGOH
NDUFA1ENSG00000125356.6912.403801602.06980-0.812209.014807.92960HepG2MATR3
NDUFA1ENSG00000125356.61235.587801639.80500-0.408302.983902.32710HepG2NCBP2
NDUFA1ENSG00000125356.61345.300901771.16500-0.396804.896503.88620HepG2NOL12
NDUFA1ENSG00000125356.61086.585001460.34170-0.426503.208502.43250HepG2PABPC4
NDUFA1ENSG00000125356.6989.033701583.06050-0.6786015.2371013.99800HepG2PCBP1
NDUFA1ENSG00000125356.6193.476801000.08470-2.3699039.1528035.92570HepG2PCBP2
NDUFA1ENSG00000125356.6975.627801610.81010-0.7234016.0947014.98520HepG2PTBP1
NDUFA1ENSG00000125356.61437.036401794.71890-0.320705.530704.75280HepG2PUM1
NDUFA1ENSG00000125356.61338.088201793.43010-0.422505.313904.39790HepG2PUM2
NDUFA1ENSG00000125356.61110.443501744.57500-0.6517011.6465010.49670HepG2QKI
NDUFA1ENSG00000125356.61247.245701583.30340-0.344203.198802.47890HepG2RBM25
NDUFA1ENSG00000125356.6938.420701792.68790-0.9338026.7708025.43950HepG2NELFE
NDUFA1ENSG00000125356.6785.947601669.62540-1.0870034.5969032.88150HepG2RECQL
NDUFA1ENSG00000125356.6481.00240625.42650-0.378802.010601.47870HepG2RPS19
NDUFA1ENSG00000125356.6888.125101126.12030-0.342502.241301.51680HepG2RPS2
NDUFA1ENSG00000125356.6844.49270686.543200.298602.818502.16970HepG2SAFB2
NDUFA1ENSG00000125356.6882.90970627.679100.492103.842302.73240HepG2SERBP1
NDUFA1ENSG00000125356.6651.08280828.88710-0.348302.318601.66980HepG2SF3B1
NDUFA1ENSG00000125356.61217.749301677.08470-0.461707.713406.80390HepG2SF3B4
NDUFA1ENSG00000125356.6980.19250800.623800.291803.159802.47940HepG2SMN1
NDUFA1ENSG00000125356.61587.862601894.35730-0.254603.200902.67490HepG2SRFBP1
NDUFA1ENSG00000125356.61316.417401750.50380-0.411206.906406.24150HepG2SRSF1
NDUFA1ENSG00000125356.61246.220101669.27900-0.421706.720405.80180HepG2SRSF5
NDUFA1ENSG00000125356.6967.121701424.11980-0.5583010.700409.73910HepG2SRSF9
NDUFA1ENSG00000125356.61245.011301898.46660-0.6087015.8905014.59730HepG2SUCLG1
NDUFA1ENSG00000125356.6563.18710983.57460-0.804403.276902.54820HepG2SUPV3L1
NDUFA1ENSG00000125356.61114.979001573.39450-0.496907.672006.81520HepG2TAF15
NDUFA1ENSG00000125356.6583.67310816.45910-0.484203.709102.88530HepG2TARDBP
NDUFA1ENSG00000125356.61019.261501445.76340-0.504306.139304.89960HepG2TIA1
NDUFA1ENSG00000125356.6604.11610969.09220-0.681804.512002.66500HepG2TRA2A
NDUFA1ENSG00000125356.6970.61910755.796000.360804.125903.46510HepG2TRIM56
NDUFA1ENSG00000125356.6549.50400971.60150-0.822207.443406.41970HepG2U2AF1
NDUFA1ENSG00000125356.61247.443901748.24530-0.486902.899802.04400HepG2UBE2L3
NDUFA1ENSG00000125356.6733.78190581.114000.336402.221801.54180HepG2UCHL5
NDUFA1ENSG00000125356.61404.06570968.217500.536104.612403.68520HepG2XRN2
NDUFA1ENSG00000125356.6557.06310964.25780-0.791606.585704.48170HepG2ZRANB2
NDUFA1ENSG00000125356.61199.566501537.73560-0.358303.016501.77830K562AARS
NDUFA1ENSG00000125356.65857.711203418.956800.7767021.7935020.30870K562AGGF1
NDUFA1ENSG00000125356.65401.353403757.149700.523603.620302.45770K562AKAP8
NDUFA1ENSG00000125356.66290.120603557.636900.8221018.3085016.33700K562AKAP8L
NDUFA1ENSG00000125356.64371.889803732.925800.227902.575101.69610K562ATP5C1
NDUFA1ENSG00000125356.61717.520702099.65040-0.289802.855201.78260K562CSTF2
NDUFA1ENSG00000125356.62240.455303379.44010-0.5930010.103508.94810K562DDX47
NDUFA1ENSG00000125356.6566.758501185.99870-1.065304.371003.08160K562EIF3A
NDUFA1ENSG00000125356.61743.025302436.87490-0.483404.818203.78270K562EIF3G
NDUFA1ENSG00000125356.61772.828602404.37400-0.439602.151301.42310K562EIF4A3
NDUFA1ENSG00000125356.63399.779902198.284200.629005.928204.65230K562FIP1L1
NDUFA1ENSG00000125356.61821.714802500.44090-0.456905.206704.41410K562FXR1
NDUFA1ENSG00000125356.61873.285503130.85740-0.741007.488106.20680K562G3BP2
NDUFA1ENSG00000125356.65040.187104235.933600.250702.444501.73210K562GRSF1
NDUFA1ENSG00000125356.61312.062001683.05500-0.359202.529001.95480K562HNRNPC
NDUFA1ENSG00000125356.62123.938402851.76750-0.425105.201402.66660K562HNRNPH1
NDUFA1ENSG00000125356.63403.256201808.291000.912205.097603.79080K562HNRNPM
NDUFA1ENSG00000125356.62458.206103176.05300-0.369605.545304.26650K562HNRNPU
NDUFA1ENSG00000125356.63763.422502980.167100.336603.154602.30780K562HSPD1
NDUFA1ENSG00000125356.66001.288503775.341000.6686014.3448011.95820K562KIF1C
NDUFA1ENSG00000125356.64540.607803614.093300.329203.612002.33050K562MAK16
NDUFA1ENSG00000125356.62694.441703354.97960-0.316303.338702.31330K562MATR3
NDUFA1ENSG00000125356.65007.939204229.363600.243702.509401.65090K562MBNL1
NDUFA1ENSG00000125356.64201.147002964.495200.502903.982002.86770K562NAA15
NDUFA1ENSG00000125356.61279.864802991.16490-1.2247033.2129029.94800K562PCBP2
NDUFA1ENSG00000125356.62242.916403447.18870-0.620007.225205.88010K562PCBP3
NDUFA1ENSG00000125356.64041.644902495.733800.695403.474502.53880K562PPIG
NDUFA1ENSG00000125356.61914.360301508.978300.343203.193502.21040K562PSIP1
NDUFA1ENSG00000125356.62512.438803266.21930-0.378504.644503.80610K562PTBP1
NDUFA1ENSG00000125356.66624.215703527.790000.908905.307504.58750K562PUS1
NDUFA1ENSG00000125356.64902.827303437.639300.512106.494005.61100K562RBM15
NDUFA1ENSG00000125356.62315.985903131.86430-0.435404.824603.67740K562RBM22
NDUFA1ENSG00000125356.62384.316703053.00840-0.356703.015701.54240K562RBM34
NDUFA1ENSG00000125356.61352.499702286.28900-0.757407.290705.95060K562RPS19
NDUFA1ENSG00000125356.62225.204202949.92210-0.406703.311602.20780K562RPS3
NDUFA1ENSG00000125356.61336.470802355.85540-0.817804.993603.53790K562SAFB
NDUFA1ENSG00000125356.6971.437901304.88850-0.425703.617202.39640K562SRFBP1
NDUFA1ENSG00000125356.62615.426903201.99410-0.291902.604901.91630K562SRSF1
NDUFA1ENSG00000125356.62092.218803009.75280-0.524608.493705.91410K562SRSF9
NDUFA1ENSG00000125356.61253.947402173.25640-0.793409.923407.93600K562SUPV3L1
NDUFA1ENSG00000125356.61794.190702506.15520-0.482104.043001.88840K562TRNAU1AP
NDUFA1ENSG00000125356.61875.509002745.27370-0.549707.173506.08070K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NDUFA1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of NDUFA1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for NDUFA1 is not avaliable on ENCORE database.