PER2

General Information

Gene Name       : PER2
Gene ID             : ENSG00000132326.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PER2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PER2ENSG00000132326.112.383.352.87ENCSR000AEF
HepG2PER2ENSG00000132326.116.895.666.28ENCSR985KAT
K562PER2ENSG00000132326.112.962.252.60ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PER2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PER2 RNA is bound by 10 proteins.  







eCLIP assay for PER2 is not avaliable on ENCORE database.





10 proteins are bound to PER2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2239166989239167041-3'-UTR,CDS,intron-Distal,intron-Proximal3.137724.34383HepG2GRWD1
chr2239161937239162001-3'-UTR,CDS,intron-Distal4.379803.01043HepG2PCBP2
chr2239161833239161937-3'-UTR,CDS,intron-Distal3.448014.03740HepG2PCBP2
chr2239159127239159208-3'-UTR,CDS,intron-Distal,intron-Proximal4.425213.93614HepG2AQR
chr2239162206239162245-3'-UTR,CDS,intron-Distal3.217413.34848HepG2PPIG
chr2239166919239167034-3'-UTR,CDS,intron-Distal3.176894.68592HepG2PPIG
chr2239170304239170399-3'-UTR,CDS,intron-Distal,intron-Proximal5.2199915.12562HepG2PRPF8
chr2239164466239164547-3'-UTR,CDS,intron-Distal3.107784.51003HepG2PPIG
chr2239162189239162304-3'-UTR,CDS,intron-Distal3.337855.39266HepG2GRWD1
chr2239162172239162245-3'-UTR,CDS,intron-Distal3.350303.61076HepG2HLTF
chr2239166918239166989-3'-UTR,CDS,intron-Distal3.223014.75490HepG2GRWD1
chr2239159105239159215-3'-UTR,CDS,intron-Distal,intron-Proximal3.689036.95612HepG2PRPF8
chr2239171664239171760-CDS,intron-Distal,intron-Proximal3.931785.23469HepG2AQR
chr2239180097239180154-CDS,intron-Distal4.832065.52963HepG2PPIG
chr2239186504239186564-CDS,intron-Distal4.347413.79199HepG2PPIG
chr2239184446239184494-CDS,intron-Distal,intron-Proximal4.258644.16554HepG2PPIG
chr2239172561239172630-intron-Distal4.515845.07733HepG2PTBP1
chr2239172553239172664-intron-Distal6.0063514.78401HepG2PCBP2
chr2239168085239168235-intron-Distal3.448076.94724HepG2HNRNPL
chr2239172524239172618-intron-Distal3.238934.65237HepG2U2AF2
chr2239188698239188757-intron-Distal3.214503.10640HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PER2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PER2 is not available on ENCORE database.

  • 82 RBPs can affect the levels of PER2.  








The Knockdown/knockout RNA-Seq assay for PER2 is not available on ENCORE database.





82 RBPs can affect the gene expression of PER2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PER2ENSG00000132326.7504.45940744.99460-0.562503.746602.65890HepG2ABCF1
PER2ENSG00000132326.7498.51450369.248700.432902.508901.55800HepG2ADAR
PER2ENSG00000132326.7251.89200815.97830-1.6957018.3311017.08810HepG2AKAP1
PER2ENSG00000132326.7389.08580508.23140-0.385402.237701.53920HepG2CALR
PER2ENSG00000132326.7340.67340652.81160-0.938304.988603.95620HepG2CNOT7
PER2ENSG00000132326.7278.53540427.22250-0.617104.213203.39380HepG2DDX21
PER2ENSG00000132326.7539.08760781.54070-0.535803.739203.02260HepG2DDX3X
PER2ENSG00000132326.7392.75810521.88090-0.410103.009302.30680HepG2DKC1
PER2ENSG00000132326.7461.76840368.537800.325302.297101.69070HepG2DNAJC2
PER2ENSG00000132326.7386.29130610.78480-0.661005.017003.81040HepG2EEF2
PER2ENSG00000132326.7295.46610495.79360-0.746705.267004.04780HepG2EIF3D
PER2ENSG00000132326.7418.80070713.10970-0.767906.474905.49630HepG2EIF4A3
PER2ENSG00000132326.7761.59410586.814400.376002.999802.13390HepG2EIF4G1
PER2ENSG00000132326.7722.25410562.150600.361402.021001.31780HepG2EIF4G2
PER2ENSG00000132326.71067.54200796.690200.422105.353404.56510HepG2ETF1
PER2ENSG00000132326.7846.99920486.387000.800209.434508.02900HepG2FUBP3
PER2ENSG00000132326.7250.53240441.43200-0.817206.440005.07530HepG2GEMIN5
PER2ENSG00000132326.7226.56490375.37340-0.728404.810903.99100HepG2HNRNPA1
PER2ENSG00000132326.7579.08070464.407700.318302.187901.54490HepG2HNRNPF
PER2ENSG00000132326.7691.70070541.966100.351802.916402.22630HepG2HNRNPL
PER2ENSG00000132326.7666.81550414.776000.684909.310708.24770HepG2HNRNPU
PER2ENSG00000132326.7442.01690608.68850-0.461603.359602.47130HepG2MSI2
PER2ENSG00000132326.7521.82530310.477000.749002.679801.60440HepG2NONO
PER2ENSG00000132326.71034.67660659.771200.649005.855804.81860HepG2PABPC4
PER2ENSG00000132326.7562.74370713.49330-0.342402.185001.63530HepG2PCBP1
PER2ENSG00000132326.7573.14370369.946500.631506.703505.59500HepG2PPIL4
PER2ENSG00000132326.7792.00070597.789100.405803.208502.38130HepG2PRPF4
PER2ENSG00000132326.7392.32950260.908800.588403.352002.47110HepG2PRPF8
PER2ENSG00000132326.7949.59360597.292100.668808.048706.93060HepG2PUM2
PER2ENSG00000132326.7579.10470786.28760-0.441203.953103.22440HepG2QKI
PER2ENSG00000132326.7771.76610486.070200.666903.321902.55250HepG2RAVER1
PER2ENSG00000132326.71000.32970665.879900.587007.815407.04730HepG2RBM22
PER2ENSG00000132326.7566.51880713.60260-0.333002.195301.58860HepG2RBM25
PER2ENSG00000132326.7524.64000807.97370-0.623007.866107.03670HepG2NELFE
PER2ENSG00000132326.7747.26870477.623300.645703.837402.72510HepG2RPS10
PER2ENSG00000132326.7333.36010482.45780-0.533303.802403.09210HepG2RPS19
PER2ENSG00000132326.7337.59340484.17600-0.520203.226302.20800HepG2SERBP1
PER2ENSG00000132326.71539.97170838.769100.876505.576604.59950HepG2SF3A3
PER2ENSG00000132326.71461.29600525.464001.4755033.2877031.16940HepG2SF3B1
PER2ENSG00000132326.7828.28700539.829200.617508.902007.75690HepG2SLBP
PER2ENSG00000132326.7326.65240430.74980-0.399102.206401.62140HepG2SMN1
PER2ENSG00000132326.7902.86530752.076800.263502.165101.70480HepG2SRFBP1
PER2ENSG00000132326.7664.35530788.96080-0.248001.831401.42420HepG2SRSF1
PER2ENSG00000132326.7756.31080555.918800.444004.248103.50140HepG2SRSF5
PER2ENSG00000132326.7441.50660709.13880-0.683608.324807.43680HepG2TAF15
PER2ENSG00000132326.71355.30880643.420101.0747016.9685015.35860HepG2U2AF1
PER2ENSG00000132326.7789.57570390.637101.015103.073402.03150HepG2U2AF2
PER2ENSG00000132326.7617.04290743.86120-0.269702.122301.49650HepG2UPF1
PER2ENSG00000132326.7904.81090718.166900.333203.328302.68240HepG2UTP3
PER2ENSG00000132326.7127.83470212.95950-0.736303.348602.73540K562AGGF1
PER2ENSG00000132326.7166.00610233.96750-0.495102.186401.32390K562AKAP8
PER2ENSG00000132326.7129.81790221.58340-0.771403.704402.94550K562AKAP8L
PER2ENSG00000132326.7406.78630279.456200.541502.846502.25080K562AQR
PER2ENSG00000132326.7126.35380232.47450-0.879604.549503.34570K562ATP5C1
PER2ENSG00000132326.7164.77110247.61380-0.587602.934902.12760K562CPSF6
PER2ENSG00000132326.7619.94330350.245600.8237011.2304010.01470K562DDX47
PER2ENSG00000132326.7250.46000166.099800.592402.446201.58930K562EFTUD2
PER2ENSG00000132326.7344.32280128.838801.418108.792306.96540K562EIF3A
PER2ENSG00000132326.7218.8064099.612201.135203.223002.36670K562EIF3G
PER2ENSG00000132326.7539.07170352.272000.613704.849203.62320K562EIF4G2
PER2ENSG00000132326.7169.29910308.33320-0.864906.054404.76670K562FIP1L1
PER2ENSG00000132326.7178.75500251.95640-0.495202.144801.38820K562FMR1
PER2ENSG00000132326.7143.77210213.56240-0.570902.177601.37130K562FTO
PER2ENSG00000132326.7323.16670115.159501.4885016.3674015.00500K562FXR1
PER2ENSG00000132326.7183.04690404.36020-1.1434011.131909.58900K562GRSF1
PER2ENSG00000132326.788.17840158.57010-0.846602.461001.33140K562HNRNPA2B1
PER2ENSG00000132326.792.37100151.00480-0.709102.502501.93170K562HNRNPC
PER2ENSG00000132326.7292.48990213.337000.455202.241201.43700K562HNRNPU
PER2ENSG00000132326.7247.84240418.05790-0.754305.645504.52490K562HSPD1
PER2ENSG00000132326.7147.21990235.19230-0.675902.903102.05570K562KIF1C
PER2ENSG00000132326.7151.26280225.10700-0.573602.448501.45810K562MAK16
PER2ENSG00000132326.7224.59960141.687700.664503.614502.54810K562MATR3
PER2ENSG00000132326.7194.26770126.322200.620802.605601.65700K562PCBP2
PER2ENSG00000132326.7239.16050349.99480-0.549403.205502.31180K562PPIG
PER2ENSG00000132326.7305.95480161.636000.920505.493504.43460K562PRPF8
PER2ENSG00000132326.7204.54440137.943100.568202.656402.00350K562PTBP1
PER2ENSG00000132326.7115.37790219.82530-0.930004.539903.86760K562PUS1
PER2ENSG00000132326.7122.84630214.12420-0.801603.562402.90310K562RBM15
PER2ENSG00000132326.7219.51940132.259100.730903.896902.88790K562RBM22
PER2ENSG00000132326.7301.27470164.595100.872104.634703.57570K562RPS19
PER2ENSG00000132326.7336.12690171.594900.969907.721005.95140K562SAFB
PER2ENSG00000132326.7257.67890135.232700.930006.183905.13690K562SRSF1
PER2ENSG00000132326.785.42640174.23860-1.028303.191001.62610K562SUPT6H
PER2ENSG00000132326.7407.27560193.157401.0761011.526509.86100K562SYNCRIP
PER2ENSG00000132326.7296.07350182.526900.697703.335501.37330K562TRNAU1AP
PER2ENSG00000132326.7252.21550347.76610-0.463502.524701.31810K562TROVE2
PER2ENSG00000132326.7244.07370318.51110-0.384002.178001.53500K562UPF1
PER2ENSG00000132326.7107.43520222.80380-1.052304.450602.66970K562UTP18
PER2ENSG00000132326.7361.31980283.407800.350302.062901.32510K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PER2 is not available on ENCORE database.





1 RBPs can affect the splicing of PER2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEPER2ENSG00000132326.7chr2-2391766962391768392391775632391776152391741522391742312391799522391801540.333000.007970.044931includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PER2 is not avaliable on ENCORE database.