NDUFB4

General Information

Gene Name       : NDUFB4
Gene ID             : ENSG00000065518.7
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NDUFB4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NDUFB4ENSG00000065518.7134.42202.09168.25ENCSR000AEF
HepG2NDUFB4ENSG00000065518.7139.91148.11144.01ENCSR985KAT
K562NDUFB4ENSG00000065518.7151.48159.71155.59ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NDUFB4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NDUFB4 RNA is bound by 12 proteins.  







eCLIP assay for NDUFB4 is not avaliable on ENCORE database.





12 proteins are bound to NDUFB4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3120319957120320009+3'-UTR,CDS,intron-Distal,intron-Proximal3.258463.79741HepG2GRWD1
chr3120321095120321155+3'-UTR,CDS4.110703.08171K562APOBEC3C
chr3120320089120320104+3'-UTR,CDS,intron-Distal3.522564.36276HepG2LARP4
chr3120319955120320027+3'-UTR,CDS,intron-Distal,intron-Proximal4.211864.42709HepG2G3BP1
chr3120321051120321159+3'-UTR,CDS,intron-Proximal4.2358217.15677HepG2LARP4
chr3120319957120320003+3'-UTR,CDS,intron-Distal,intron-Proximal3.403973.61371K562SND1
chr3120319957120320013+3'-UTR,CDS,intron-Distal,intron-Proximal3.744234.40383K562UCHL5
chr3120319956120320002+3'-UTR,CDS,intron-Distal,intron-Proximal3.236324.74431HepG2LARP4
chr3120315199120315266+5'-UTR,CDS3.204273.14203K562LIN28B
chr3120315354120315454+5'-UTR,CDS,intron-Proximal5.3427818.19250HepG2PRPF8
chr3120315186120315273+5'-UTR,CDS4.450864.76162K562IGF2BP2
chr3120315273120315340+CDS4.202367.62840K562IGF2BP2
chr3120315271120315304+CDS3.5317115.04070K562YBX3
chr3120315219120315267+CDS4.0167621.59960K562RPS3
chr3120315270120315322+CDS4.3490611.21468HepG2RPS3
chr3120315304120315337+CDS3.2251212.30570K562YBX3
chr3120315271120315322+CDS4.7830018.41676K562RPS3
chr3120315207120315342+CDS3.2976411.46011HepG2GRWD1
chr3120315521120315591+intron-Distal,intron-Proximal5.086348.98006K562RBM15
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NDUFB4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NDUFB4 is not available on ENCORE database.

  • 90 RBPs can affect the levels of NDUFB4.  








The Knockdown/knockout RNA-Seq assay for NDUFB4 is not available on ENCORE database.





90 RBPs can affect the gene expression of NDUFB4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NDUFB4ENSG00000065518.7538.80630950.75350-0.819309.601307.89350HepG2ADAR
NDUFB4ENSG00000065518.72617.851701837.093200.510902.300901.81110HepG2AKAP1
NDUFB4ENSG00000065518.71144.353901349.46070-0.237802.403001.75450HepG2AUH
NDUFB4ENSG00000065518.7727.14510506.254700.522304.077103.36650HepG2BOP1
NDUFB4ENSG00000065518.71778.217801444.154900.300102.066101.39100HepG2CIRBP
NDUFB4ENSG00000065518.71011.38400835.945900.274702.837002.16570HepG2CKAP4
NDUFB4ENSG00000065518.7656.21300464.749800.497602.889002.18920HepG2CPSF6
NDUFB4ENSG00000065518.7781.66970948.97020-0.279802.515901.88800HepG2DNAJC2
NDUFB4ENSG00000065518.7727.73330955.89410-0.393402.526401.64220HepG2EEF2
NDUFB4ENSG00000065518.71176.027601453.27210-0.305401.935601.42920HepG2EIF2S1
NDUFB4ENSG00000065518.71217.833201606.08280-0.399202.603301.98210HepG2EIF4A3
NDUFB4ENSG00000065518.71320.319301532.77500-0.215302.088301.34450HepG2EIF4G1
NDUFB4ENSG00000065518.71028.923701468.30420-0.513005.160004.06780HepG2EIF4G2
NDUFB4ENSG00000065518.71156.528601549.45090-0.422006.516005.65800HepG2ETF1
NDUFB4ENSG00000065518.71229.484401595.70860-0.376102.790101.89510HepG2G3BP2
NDUFB4ENSG00000065518.7389.32590526.77650-0.436202.283601.69920HepG2GPKOW
NDUFB4ENSG00000065518.71144.296501521.92110-0.411403.467602.69040HepG2HNRNPK
NDUFB4ENSG00000065518.71178.258801415.28720-0.264403.211702.48960HepG2HNRNPL
NDUFB4ENSG00000065518.7756.15540502.717400.588804.562403.77360HepG2HNRNPLL
NDUFB4ENSG00000065518.71193.816301527.96310-0.356002.361501.73190HepG2IGF2BP2
NDUFB4ENSG00000065518.71048.427401620.89510-0.628606.474305.48190HepG2MAGOH
NDUFB4ENSG00000065518.7286.84300445.79400-0.636102.569701.84720HepG2NSUN2
NDUFB4ENSG00000065518.71113.318601485.90750-0.416503.072102.31320HepG2PABPC4
NDUFB4ENSG00000065518.7789.08280952.53280-0.271602.179001.51710HepG2PPIL4
NDUFB4ENSG00000065518.7737.71980935.40800-0.342503.378802.53200HepG2PRPF4
NDUFB4ENSG00000065518.7908.675801448.44000-0.672708.600207.74580HepG2PTBP1
NDUFB4ENSG00000065518.71287.942101561.15170-0.277503.985103.30150HepG2PUM1
NDUFB4ENSG00000065518.71307.190101560.01650-0.255102.138401.54570HepG2PUM2
NDUFB4ENSG00000065518.7681.07920851.71150-0.322503.155302.50660HepG2PUS1
NDUFB4ENSG00000065518.71251.863801568.46910-0.325303.104002.44940HepG2QKI
NDUFB4ENSG00000065518.71424.660901017.527600.485502.226401.58860HepG2RAVER1
NDUFB4ENSG00000065518.71970.196201295.035600.6052011.4735010.57150HepG2RBM22
NDUFB4ENSG00000065518.7905.538201611.88610-0.8319012.8030011.79680HepG2NELFE
NDUFB4ENSG00000065518.7991.085501501.41350-0.599206.248105.37390HepG2RECQL
NDUFB4ENSG00000065518.71352.59630909.639200.572302.419901.79080HepG2SF3A3
NDUFB4ENSG00000065518.71067.21470553.633800.946705.073004.00370HepG2SNRNP70
NDUFB4ENSG00000065518.71208.868701452.04280-0.264402.849802.21480HepG2SRSF5
NDUFB4ENSG00000065518.7910.367201091.04510-0.261202.224801.59400HepG2SRSF7
NDUFB4ENSG00000065518.71444.200401651.38110-0.193401.841601.31540HepG2SUCLG1
NDUFB4ENSG00000065518.7779.365601414.91500-0.860309.567908.62720HepG2TAF15
NDUFB4ENSG00000065518.7846.369001037.59240-0.293901.980801.54270HepG2TIAL1
NDUFB4ENSG00000065518.71028.58470778.848500.401104.481603.74920HepG2UTP3
NDUFB4ENSG00000065518.7723.28790923.12690-0.352003.962103.18260HepG2ZC3H8
NDUFB4ENSG00000065518.71161.42840887.228000.388405.761105.04680HepG2ZNF622
NDUFB4ENSG00000065518.73003.471601635.611400.8767033.6424031.73690K562AGGF1
NDUFB4ENSG00000065518.72288.799501797.422100.348603.240902.15620K562AKAP8
NDUFB4ENSG00000065518.73075.004701701.960300.8533015.2959013.54710K562AKAP8L
NDUFB4ENSG00000065518.72274.215501785.827700.348704.132902.99550K562ATP5C1
NDUFB4ENSG00000065518.7855.829001108.16320-0.372803.419602.22570K562CSTF2
NDUFB4ENSG00000065518.71540.960201870.54350-0.279602.701502.05660K562DDX47
NDUFB4ENSG00000065518.72177.858701831.226900.250002.810301.92850K562DKC1
NDUFB4ENSG00000065518.71470.651701712.71670-0.219802.060101.42350K562EIF2S2
NDUFB4ENSG00000065518.7593.01730839.91080-0.502202.342901.42390K562EIF3A
NDUFB4ENSG00000065518.71451.702501108.685000.388803.077501.69670K562EWSR1
NDUFB4ENSG00000065518.71099.272001492.95170-0.441604.162102.57020K562EXOSC5
NDUFB4ENSG00000065518.71447.45210931.945200.635103.744102.74640K562FIP1L1
NDUFB4ENSG00000065518.71847.664501451.956700.347603.140901.58780K562G3BP1
NDUFB4ENSG00000065518.7567.128701060.89520-0.903508.581507.19230K562G3BP2
NDUFB4ENSG00000065518.71150.755001383.40570-0.265602.423601.36290K562GLRX3
NDUFB4ENSG00000065518.71991.67930831.499101.260105.167803.33050K562HNRNPA2B1
NDUFB4ENSG00000065518.7925.388401242.58460-0.425204.024703.32100K562HNRNPC
NDUFB4ENSG00000065518.71067.34460766.638700.477303.561802.49380K562HNRNPM
NDUFB4ENSG00000065518.71252.197601559.61170-0.316703.432102.43930K562HNRNPU
NDUFB4ENSG00000065518.72859.424301806.091100.6628011.701409.62430K562KIF1C
NDUFB4ENSG00000065518.7517.73800695.68010-0.426202.149001.33770K562KRR1
NDUFB4ENSG00000065518.71322.509801596.10180-0.271302.187001.43470K562MAGOH
NDUFB4ENSG00000065518.72171.412301418.192700.614503.576602.54230K562NAA15
NDUFB4ENSG00000065518.71268.616501616.07220-0.349206.146305.09390K562NSUN2
NDUFB4ENSG00000065518.72203.21790726.744401.6000010.334907.99460K562PABPN1
NDUFB4ENSG00000065518.71172.318601899.02300-0.695908.025206.61000K562PCBP3
NDUFB4ENSG00000065518.71078.103501456.56000-0.434104.829003.77020K562POLR2G
NDUFB4ENSG00000065518.71658.947001058.087000.648703.887102.89040K562PPIG
NDUFB4ENSG00000065518.71975.66470863.446401.194104.966102.83540K562PPP1R8
NDUFB4ENSG00000065518.71353.81070953.814500.505104.679303.70580K562PRPF8
NDUFB4ENSG00000065518.73860.400001687.644701.1936029.6455027.84600K562PUS1
NDUFB4ENSG00000065518.72724.027601644.548600.727908.379907.37450K562RBM15
NDUFB4ENSG00000065518.71319.148501006.544100.390103.624202.07460K562RBM25
NDUFB4ENSG00000065518.71191.90720957.321700.316103.805501.96360K562RPS10
NDUFB4ENSG00000065518.7960.475501298.00410-0.434504.226802.87810K562SAFB
NDUFB4ENSG00000065518.71044.141601341.90820-0.362002.784101.33540K562SDAD1
NDUFB4ENSG00000065518.71267.79060816.188500.635204.529302.50230K562SERBP1
NDUFB4ENSG00000065518.72339.39080664.291101.8161013.7513010.67590K562SF1
NDUFB4ENSG00000065518.71322.386801103.409500.261102.151101.39810K562SF3B4
NDUFB4ENSG00000065518.71591.82490763.419001.060002.862601.60890K562SNRNP200
NDUFB4ENSG00000065518.71300.751201633.70330-0.328804.890103.69050K562SRPK2
NDUFB4ENSG00000065518.71213.393001657.85210-0.450305.682703.45230K562SRSF9
NDUFB4ENSG00000065518.71826.18070912.810701.000302.828801.38240K562SUPT6H
NDUFB4ENSG00000065518.71021.857701380.62790-0.434103.370501.38930K562TRNAU1AP
NDUFB4ENSG00000065518.7783.439701062.27440-0.439304.459103.44510K562U2AF2
NDUFB4ENSG00000065518.71249.370901713.55320-0.455805.140904.19290K562UPF1
NDUFB4ENSG00000065518.72503.099901711.331500.548502.653201.39580K562UTP18
NDUFB4ENSG00000065518.71167.459201466.23730-0.328702.453701.62710K562WDR3
NDUFB4ENSG00000065518.7644.653101272.72390-0.981306.360603.73010K562XRCC6
NDUFB4ENSG00000065518.71797.03750898.041901.000703.027501.35140K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NDUFB4 is not available on ENCORE database.






No RBPs affect the alternative splcing events of NDUFB4 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for NDUFB4 is not avaliable on ENCORE database.