ACTR6

General Information

Gene Name : ACTR6
Gene ID : ENSG00000075089.9
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ACTR6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ACTR6	ENSG00000075089.9	29.92	25.32	27.62	ENCSR000AEF
HepG2	ACTR6	ENSG00000075089.9	9.94	16.75	13.34	ENCSR985KAT
K562	ACTR6	ENSG00000075089.9	42.19	47.70	44.95	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ACTR6 is not avaliable on ENCORE database.

Proteins bound to RNA

ACTR6 RNA is bound by 8 proteins.

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eCLIP assay for ACTR6 is not avaliable on ENCORE database.

8 proteins are bound to ACTR6 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	100617773	100617863	+	3'-UTR,intron-Distal	3.91427	10.86094	K562	PUM2
chr12	100613894	100613925	+	3'-UTR,5'-UTR,CDS,intron-Proximal	5.29883	10.11393	K562	LIN28B
chr12	100617583	100617703	+	3'-UTR,CDS,intron-Distal	3.44217	7.90527	K562	ZNF622
chr12	100618152	100618191	+	3'-UTR,intron-Distal	5.66349	7.65809	K562	PABPC4
chr12	100617731	100617793	+	3'-UTR,intron-Distal	4.20462	6.42536	K562	LIN28B
chr12	100618138	100618152	+	3'-UTR,intron-Distal	6.08960	5.71015	K562	PABPC4
chr12	100606032	100606130	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.48238	5.15776	HepG2	BCLAF1
chr12	100613877	100613894	+	3'-UTR,5'-UTR,CDS	3.46020	4.75351	K562	LIN28B
chr12	100617563	100617599	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.35083	4.34615	K562	LIN28B
chr12	100618090	100618186	+	3'-UTR,intron-Distal	4.73268	4.16557	K562	DDX6
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 14 entries

eCLIP assay for ACTR6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ACTR6 is not available on ENCORE database.
123 RBPs can affect the levels of ACTR6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ACTR6 is not available on ENCORE database.

123 RBPs can affect the gene expression of ACTR6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ACTR6	ENSG00000075089.5	1364.36480	2943.37380	-1.10920	31.93400	29.09830	K562	EIF4G2
ACTR6	ENSG00000075089.5	783.70940	1488.92510	-0.92590	22.57150	20.95910	K562	FXR1
ACTR6	ENSG00000075089.5	198.68150	503.11180	-1.34040	21.57810	20.14310	HepG2	PCBP1
ACTR6	ENSG00000075089.5	664.03050	1469.91470	-1.14640	21.02920	19.25460	K562	NSUN2
ACTR6	ENSG00000075089.5	1660.58110	3211.34250	-0.95150	20.22210	17.92980	K562	PUF60
ACTR6	ENSG00000075089.5	1310.40130	2745.32640	-1.06700	18.43750	17.08980	K562	AQR
ACTR6	ENSG00000075089.5	328.82180	647.50210	-0.97760	15.23230	14.00360	HepG2	ETF1
ACTR6	ENSG00000075089.5	805.73030	1725.60750	-1.09870	15.81840	13.86430	K562	U2AF2
ACTR6	ENSG00000075089.5	760.48400	1288.07630	-0.76020	15.10180	13.62440	K562	EIF2S2
ACTR6	ENSG00000075089.5	243.54200	598.22080	-1.29650	14.98230	13.49530	HepG2	G3BP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 159 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ACTR6 is not available on ENCORE database.

9 RBPs can affect the splicing of ACTR6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	ACTR6	ENSG00000075089.5	chr12	+	100603850	100603986			100601504	100601564	100604072	100604098	-0.47000	0.00000	excluded	HepG2	U2AF2
SE	ACTR6	ENSG00000075089.5	chr12	+	100603850	100603986			100601440	100601564	100604072	100604129	-0.08400	0.00001	excluded	K562	AQR
SE	ACTR6	ENSG00000075089.5	chr12	+	100603850	100603986			100601440	100601564	100604072	100604098	-0.08700	0.00002	excluded	K562	U2AF1
SE	ACTR6	ENSG00000075089.5	chr12	+	100603850	100603986			100601440	100601564	100604072	100604098	-0.20100	0.00000	excluded	K562	U2AF2
A5SS	ACTR6	ENSG00000075089.5	chr12	+	100599453	100599535			100599453	100599522	100601440	100601699	0.11400	0.00005	longer	K562	AQR
RI	ACTR6	ENSG00000075089.5	chr12	+	100603943	100604129			100603943	100603986	100604072	100604129	0.05200	0.00001	included	K562	AQR
MXE	ACTR6	ENSG00000075089.5	chr12	+	100601354	100601564	100603850	100603986	100599453	100599522	100604072	100604129	0.08900	0.00000	1included	K562	AQR
MXE	ACTR6	ENSG00000075089.5	chr12	+	100601440	100601564	100604058	100604129	100598673	100598835	100606033	100606132	0.05900	0.00007	1included	K562	AQR
MXE	ACTR6	ENSG00000075089.5	chr12	+	100599453	100599522	100601440	100601564	100598717	100598835	100604072	100604129	-0.11600	0.00001	2included	K562	AQR
MXE	ACTR6	ENSG00000075089.5	chr12	+	100603850	100603986	100604072	100604129	100601440	100601564	100606227	100606306	-0.11300	0.00000	2included	K562	AQR

Showing 1 to 10 of 25 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ACTR6

General Information

Functions

Localization

Domains (AlphaFold: ACTR6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ACTR6 is not avaliable on ENCORE database.

8 proteins are bound to ACTR6 RNA:

eCLIP assay for ACTR6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ACTR6 is not available on ENCORE database.

123 RBPs can affect the gene expression of ACTR6 :

The Knockdown/knockout RNA-Seq assay for ACTR6 is not available on ENCORE database.

9 RBPs can affect the splicing of ACTR6 :

The Knockdown/knockout RNA-Seq assay for ACTR6 is not avaliable on ENCORE database.