CHAC1

General Information

Gene Name       : CHAC1
Gene ID             : ENSG00000128965.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CHAC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CHAC1ENSG00000128965.120.431.220.82ENCSR000AEF
HepG2CHAC1ENSG00000128965.120.000.000.00ENCSR985KAT
K562CHAC1ENSG00000128965.1223.3010.1816.74ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CHAC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CHAC1 RNA is bound by 3 proteins.  







eCLIP assay for CHAC1 is not avaliable on ENCORE database.





3 proteins are bound to CHAC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr154124809941248140+3'-UTR3.864376.06042K562RBM15
chr154124805541248092+3'-UTR5.3838211.20228K562RBM15
chr154124778041247798+3'-UTR,CDS5.9726416.31725K562RBM15
chr154124772541247780+3'-UTR,CDS,intron-Proximal6.2221918.54323K562RBM15
chr154124793241247993+3'-UTR,CDS5.108547.81713K562RBM15
chr154124818041248223+3'-UTR5.2579610.03208K562RBM15
chr154124804741248055+3'-UTR5.046067.58013K562RBM15
chr154124755241247622+3'-UTR,CDS,intron-Proximal4.358796.77156K562AQR
chr154124779841247828+3'-UTR,CDS5.7412713.13556K562RBM15
chr154124639041246493+5'-UTR,CDS,intron-Proximal5.0463710.60410K562AQR
chr154124639841246466+5'-UTR,CDS,intron-Proximal5.886659.37503K562GPKOW
chr154124786241247891+CDS4.436564.46921K562RBM15
chr154124601241246026+intron-Proximal3.727156.42898K562AQR
chr154124602641246059+intron-Proximal4.3509110.30697K562AQR
chr154124605941246078+intron-Proximal4.566313.11721K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CHAC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CHAC1 is not available on ENCORE database.

  • 83 RBPs can affect the levels of CHAC1.  








The Knockdown/knockout RNA-Seq assay for CHAC1 is not available on ENCORE database.





83 RBPs can affect the gene expression of CHAC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CHAC1ENSG00000128965.711.047700.0000099999.999902.722801.75340HepG2DDX59
CHAC1ENSG00000128965.729.209501.955703.900603.707403.00120HepG2DDX6
CHAC1ENSG00000128965.778.869204.566304.1103015.5467014.31240HepG2ETF1
CHAC1ENSG00000128965.712.634300.0000099999.999902.770701.57990HepG2KHDRBS1
CHAC1ENSG00000128965.736.75180129.38060-1.815706.057904.25170K562ABCF1
CHAC1ENSG00000128965.730.41720107.80720-1.825506.513503.99660K562ADAR
CHAC1ENSG00000128965.7514.218601343.30640-1.3853031.3032029.48180K562AGGF1
CHAC1ENSG00000128965.7468.134301397.75420-1.5781038.8414035.89170K562AKAP8L
CHAC1ENSG00000128965.795.44040177.41060-0.894403.269401.91950K562APOBEC3C
CHAC1ENSG00000128965.777.27230213.98330-1.469508.097007.18090K562AQR
CHAC1ENSG00000128965.7808.261101466.54870-0.8595018.7100016.11900K562ATP5C1
CHAC1ENSG00000128965.721.4932051.87630-1.271202.531501.69820K562BOP1
CHAC1ENSG00000128965.761.29890105.56900-0.784302.654201.62970K562CCAR1
CHAC1ENSG00000128965.747.07890136.64150-1.537206.237404.58470K562CNOT7
CHAC1ENSG00000128965.739.84680130.06500-1.706708.779806.79990K562CPEB4
CHAC1ENSG00000128965.732.84470115.30450-1.811708.876105.84780K562YBX3
CHAC1ENSG00000128965.784.48410247.34140-1.5498012.1394010.17390K562CELF1
CHAC1ENSG00000128965.71117.308501576.06480-0.496305.092403.07340K562DDX19B
CHAC1ENSG00000128965.748.48160111.25240-1.198304.351302.01500K562DDX1
CHAC1ENSG00000128965.722.72730134.52530-2.5654015.3431013.92100K562DDX47
CHAC1ENSG00000128965.7495.92850189.555701.387407.763405.28650K562DDX6
CHAC1ENSG00000128965.760.39340118.18670-0.968603.574402.03260K562DHX30
CHAC1ENSG00000128965.71045.409201504.18970-0.524905.688804.37660K562DKC1
CHAC1ENSG00000128965.720.60290113.52140-2.4620013.0958010.52720K562DNAJC21
CHAC1ENSG00000128965.732.08780120.33210-1.906908.196905.36600K562DNAJC2
CHAC1ENSG00000128965.7717.49930120.127402.5783035.4039033.38910K562EIF2S2
CHAC1ENSG00000128965.78.04280107.38100-3.7389014.9627012.66400K562EIF3A
CHAC1ENSG00000128965.716.7437057.28150-1.774503.858902.61350K562EIF3D
CHAC1ENSG00000128965.74.53720146.53140-5.0133035.8407033.00960K562EIF3G
CHAC1ENSG00000128965.7463.75260175.849701.398904.822103.22980K562EIF4B
CHAC1ENSG00000128965.730.50040115.24160-1.917803.696801.39740K562EIF4G1
CHAC1ENSG00000128965.796.07080201.07630-1.065606.643305.20970K562EIF4G2
CHAC1ENSG00000128965.717.2806047.57280-1.461002.851901.92360K562FTO
CHAC1ENSG00000128965.755.10800203.11140-1.881902.487201.90690K562FXR1
CHAC1ENSG00000128965.7154.3107047.224201.708106.689903.38680K562FXR2
CHAC1ENSG00000128965.780.70230160.07190-0.988004.550103.58350K562GRSF1
CHAC1ENSG00000128965.7497.402801538.51740-1.629102.574401.41020K562HNRNPA2B1
CHAC1ENSG00000128965.727.80210127.84830-2.201209.600006.87660K562HNRNPAB
CHAC1ENSG00000128965.727.46660131.64980-2.261003.020801.82410K562HNRNPF
CHAC1ENSG00000128965.7166.4020076.534901.120405.438504.07790K562HNRNPM
CHAC1ENSG00000128965.7724.83050126.109202.5229052.5635049.88160K562HSPD1
CHAC1ENSG00000128965.7378.64850156.312701.276306.558004.69190K562IGF2BP2
CHAC1ENSG00000128965.758.33780124.64070-1.095303.353301.76470K562ILF2
CHAC1ENSG00000128965.748.90390106.58520-1.124004.169302.33430K562KHDRBS1
CHAC1ENSG00000128965.7811.476201483.42590-0.870303.937402.93070K562KIF1C
CHAC1ENSG00000128965.722.0338051.40280-1.222102.465501.64350K562METAP2
CHAC1ENSG00000128965.775.62980214.31060-1.5027011.031208.90590K562MSI2
CHAC1ENSG00000128965.753.62190198.99940-1.891908.015506.70510K562MTPAP
CHAC1ENSG00000128965.730.68120131.27190-2.097109.947207.61270K562PABPC1
CHAC1ENSG00000128965.7498.803701346.98610-1.433202.224201.35680K562PABPN1
CHAC1ENSG00000128965.729.09570135.27950-2.2171012.3031010.55640K562PCBP3
CHAC1ENSG00000128965.7506.15170242.258701.062904.461202.39760K562PKM
CHAC1ENSG00000128965.7354.74720206.618000.779705.203703.31850K562PNPT1
CHAC1ENSG00000128965.724.62230103.75570-2.075209.687308.22720K562POLR2G
CHAC1ENSG00000128965.748.34390121.52160-1.329804.610002.28400K562PPIL4
CHAC1ENSG00000128965.7304.74990132.090501.206006.669005.16220K562PSIP1
CHAC1ENSG00000128965.746.30190159.33750-1.782902.760202.09660K562PTBP1
CHAC1ENSG00000128965.777.18340219.37600-1.5070010.573308.96510K562PUF60
CHAC1ENSG00000128965.7131.38780228.62380-0.799104.628903.37670K562PUM2
CHAC1ENSG00000128965.7374.806001386.30970-1.8870047.3114045.00090K562PUS1
CHAC1ENSG00000128965.7130.0531053.612601.278403.580401.51780K562QKI
CHAC1ENSG00000128965.7359.889801350.64970-1.9080064.9173061.96830K562RBM15
CHAC1ENSG00000128965.7296.78180151.817900.967006.513304.10330K562RBM17
CHAC1ENSG00000128965.744.03300160.64820-1.867202.459401.43940K562NELFE
CHAC1ENSG00000128965.739.20960144.31460-1.8799012.588209.55680K562RPS10
CHAC1ENSG00000128965.711.0847053.03870-2.258504.912703.82210K562RPS19
CHAC1ENSG00000128965.735.33000121.83160-1.785907.220804.56760K562RPS3A
CHAC1ENSG00000128965.796.18620218.19920-1.181704.410803.39880K562SF3A3
CHAC1ENSG00000128965.719.9022050.08740-1.331502.462001.54790K562SF3B1
CHAC1ENSG00000128965.748.50230116.26960-1.261305.441003.63950K562SLBP
CHAC1ENSG00000128965.765.38060223.55620-1.773707.234505.79630K562SRPK2
CHAC1ENSG00000128965.756.29660156.23760-1.472602.146101.51480K562SRSF1
CHAC1ENSG00000128965.7658.74890231.712901.5073013.3084010.85500K562SRSF4
CHAC1ENSG00000128965.7462.27800147.638101.646606.229404.54480K562SRSF5
CHAC1ENSG00000128965.7251.61190151.147800.735102.857301.55600K562SSB
CHAC1ENSG00000128965.734.55120122.04040-1.820606.054703.98960K562SSRP1
CHAC1ENSG00000128965.7579.53880152.476201.926203.920302.92370K562TIA1
CHAC1ENSG00000128965.7413.42410149.796401.4645012.763009.80970K562TRA2A
CHAC1ENSG00000128965.7181.2203098.351500.881603.572501.54370K562TRNAU1AP
CHAC1ENSG00000128965.723.3594047.95700-1.037702.006001.32240K562U2AF2
CHAC1ENSG00000128965.7105.51570234.39680-1.151503.800302.97140K562UPF1
CHAC1ENSG00000128965.781.69090168.15050-1.041503.914602.47620K562UTP3
CHAC1ENSG00000128965.776.69060200.55980-1.386905.556904.29570K562WDR3
CHAC1ENSG00000128965.733.31310208.60120-2.6466011.8260010.22040K562WDR43
CHAC1ENSG00000128965.7164.34280253.49130-0.625203.408901.96640K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CHAC1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CHAC1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CHAC1 is not avaliable on ENCORE database.