CCDC92

General Information

Gene Name       : CCDC92
Gene ID             : ENSG00000119242.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CCDC92)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CCDC92ENSG00000119242.81.614.843.23ENCSR000AEF
HepG2CCDC92ENSG00000119242.88.674.346.50ENCSR985KAT
K562CCDC92ENSG00000119242.82.631.722.17ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CCDC92 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CCDC92 RNA is bound by 11 proteins.  







eCLIP assay for CCDC92 is not avaliable on ENCORE database.





11 proteins are bound to CCDC92 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12124429252124429317-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.984865.60471HepG2U2AF2
chr12124430878124430938-5'-UTR,intron-Distal4.089503.82973HepG2HLTF
chr12124430893124430992-5'-UTR,intron-Distal4.518164.53722K562SLTM
chr12124456633124456672-5'-UTR,intron-Distal,intron-Proximal4.517683.46375HepG2XRN2
chr12124422234124422293-CDS,intron-Distal,intron-Proximal4.310054.04372HepG2BCLAF1
chr12124422170124422297-CDS,intron-Distal,intron-Proximal4.554085.59408HepG2GRWD1
chr12124453533124453639-intron-Distal3.731223.11181HepG2CSTF2
chr12124456910124456999-intron-Distal4.020663.01994HepG2GTF2F1
chr12124456699124456889-intron-Distal,intron-Proximal4.478895.11005HepG2PRPF4
chr12124456776124456882-intron-Distal3.581128.27616HepG2CSTF2T
chr12124456950124457005-intron-Distal4.341339.81366HepG2CSTF2T
chr12124456694124456757-intron-Distal,intron-Proximal3.623364.92762HepG2CSTF2T
chr12124447024124447096-intron-Distal3.066624.24686HepG2CSTF2
chr12124445158124445262-intron-Distal5.3894110.98400HepG2CSTF2
chr12124456894124457012-intron-Distal3.491917.88033HepG2NKRF
chr12124456658124456769-intron-Distal,intron-Proximal3.061935.34957HepG2NKRF
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CCDC92 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CCDC92 is not available on ENCORE database.

  • 107 RBPs can affect the levels of CCDC92.  








The Knockdown/knockout RNA-Seq assay for CCDC92 is not available on ENCORE database.





107 RBPs can affect the gene expression of CCDC92 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CCDC92ENSG00000119242.4447.12570809.98410-0.857205.011304.23720HepG2BOP1
CCDC92ENSG00000119242.4882.52330531.921800.730308.748906.69120HepG2BUD13
CCDC92ENSG00000119242.41004.70880678.716100.565802.717701.75300HepG2CCAR1
CCDC92ENSG00000119242.4576.24780358.113600.686208.793507.73780HepG2CKAP4
CCDC92ENSG00000119242.4253.57260175.121800.533902.463401.50690HepG2YBX3
CCDC92ENSG00000119242.4223.81260127.496800.811704.029402.75760HepG2CSTF2
CCDC92ENSG00000119242.4678.68600493.613300.459302.766502.13970HepG2DDX3X
CCDC92ENSG00000119242.4212.09140424.15860-0.999907.616106.63720HepG2DDX6
CCDC92ENSG00000119242.4258.34650165.845000.639402.259201.37390HepG2DHX30
CCDC92ENSG00000119242.4551.11330342.671400.685407.343706.33930HepG2DKC1
CCDC92ENSG00000119242.4356.94150171.945401.0536010.950609.62850HepG2DNAJC21
CCDC92ENSG00000119242.4338.35720170.443200.9892011.112509.90390HepG2DNAJC2
CCDC92ENSG00000119242.4502.79600360.244800.480902.583501.69010HepG2EEF2
CCDC92ENSG00000119242.4830.83760407.620401.0272011.9997010.81990HepG2EIF2S1
CCDC92ENSG00000119242.4325.50170224.077000.538603.124701.98110HepG2EIF3G
CCDC92ENSG00000119242.4680.86200450.403900.596004.022403.25560HepG2EIF4A3
CCDC92ENSG00000119242.4428.00070318.564700.425902.237201.49970HepG2EIF4G2
CCDC92ENSG00000119242.4877.70820614.996000.513104.255402.92930HepG2ESF1
CCDC92ENSG00000119242.4875.87030537.711400.7038010.803609.74180HepG2ETF1
CCDC92ENSG00000119242.4538.02200350.014400.620204.748303.65940HepG2EWSR1
CCDC92ENSG00000119242.4345.92800716.85270-1.051209.818608.48890HepG2FIP1L1
CCDC92ENSG00000119242.4371.04420260.362200.511002.740201.84680HepG2GEMIN5
CCDC92ENSG00000119242.4141.30260207.47130-0.554102.542101.57140HepG2GNB2L1
CCDC92ENSG00000119242.41292.54740843.062200.616405.251804.38810HepG2GPKOW
CCDC92ENSG00000119242.4418.61780173.592801.2698013.0555011.82280HepG2HNRNPA1
CCDC92ENSG00000119242.4493.99890193.095301.355105.281304.34720HepG2HNRNPC
CCDC92ENSG00000119242.4699.53840434.538300.686809.460608.23250HepG2HNRNPF
CCDC92ENSG00000119242.41058.69400804.541900.395902.531801.92570HepG2HNRNPLL
CCDC92ENSG00000119242.4278.58650191.818300.538303.271502.61620HepG2HNRNPU
CCDC92ENSG00000119242.4604.06980945.71540-0.646704.912403.29260HepG2HSPD1
CCDC92ENSG00000119242.4612.21880427.898300.516704.463803.56280HepG2IGF2BP1
CCDC92ENSG00000119242.4376.02650195.935100.9404011.025309.66620HepG2ILF2
CCDC92ENSG00000119242.41153.33220717.350300.685003.733802.76780HepG2LARP4
CCDC92ENSG00000119242.4300.56160457.30730-0.605503.411902.71790HepG2MATR3
CCDC92ENSG00000119242.4696.73550468.053600.573803.957003.20390HepG2NCBP2
CCDC92ENSG00000119242.4489.64900334.255400.550704.474003.50590HepG2NOL12
CCDC92ENSG00000119242.4676.29800377.747800.840105.064003.14570HepG2NOLC1
CCDC92ENSG00000119242.41408.05440713.317200.9810011.8602010.41360HepG2NSUN2
CCDC92ENSG00000119242.4611.31700416.713500.552803.674902.85030HepG2PABPC4
CCDC92ENSG00000119242.4430.27230251.909900.772204.511503.20830HepG2PCBP2
CCDC92ENSG00000119242.4386.22880241.830400.675405.174403.51310HepG2PKM
CCDC92ENSG00000119242.4439.33560171.085601.3605019.8178017.98540HepG2PPIL4
CCDC92ENSG00000119242.4266.99520156.539900.770203.545902.64300HepG2PRPF8
CCDC92ENSG00000119242.4587.66110319.074100.881009.545708.52980HepG2PUF60
CCDC92ENSG00000119242.4530.88580338.709000.648307.684806.79890HepG2PUM1
CCDC92ENSG00000119242.4595.11100364.815300.705909.135308.12340HepG2PUS1
CCDC92ENSG00000119242.4712.80500503.033100.502804.697203.91450HepG2QKI
CCDC92ENSG00000119242.4360.02950243.027800.566902.007201.39720HepG2RAVER1
CCDC92ENSG00000119242.4579.73510360.937000.683504.661202.36100HepG2RBM14
CCDC92ENSG00000119242.41056.87920735.360500.523206.279005.05360HepG2RBM15
CCDC92ENSG00000119242.4572.56310456.553800.326501.958701.38340HepG2RBM25
CCDC92ENSG00000119242.4710.82270516.943000.459403.951103.32640HepG2NELFE
CCDC92ENSG00000119242.4462.87470238.857200.954406.335404.94620HepG2RPS10
CCDC92ENSG00000119242.4563.34760284.556700.9852011.105809.97330HepG2RPS19
CCDC92ENSG00000119242.4384.15320226.101100.764604.672403.64770HepG2RPS2
CCDC92ENSG00000119242.4268.37330154.844600.793303.567302.68940HepG2RRP9
CCDC92ENSG00000119242.4384.73390170.819501.1713014.8638013.55180HepG2SAFB2
CCDC92ENSG00000119242.4465.39910305.937800.605105.873504.91370HepG2SLBP
CCDC92ENSG00000119242.4329.50410199.199100.726006.138705.24020HepG2SMN1
CCDC92ENSG00000119242.4484.17870248.177800.964107.450405.83100HepG2SMNDC1
CCDC92ENSG00000119242.4809.81950507.600700.673809.458608.68340HepG2SRFBP1
CCDC92ENSG00000119242.4216.62990504.76980-1.2204016.9645016.00400HepG2SRSF1
CCDC92ENSG00000119242.4471.73150315.036600.582302.722902.10030HepG2SRSF5
CCDC92ENSG00000119242.4872.21880440.706200.9848020.4321019.31790HepG2SSB
CCDC92ENSG00000119242.4794.04880484.089800.713908.353006.78290HepG2SUPT6H
CCDC92ENSG00000119242.4405.36850202.067301.004306.329605.36800HepG2SUPV3L1
CCDC92ENSG00000119242.4302.99380453.75440-0.582604.561303.86910HepG2TAF15
CCDC92ENSG00000119242.41192.63590783.948800.605202.384701.70440HepG2TARDBP
CCDC92ENSG00000119242.4556.21930925.63510-0.734803.375502.20000HepG2TBRG4
CCDC92ENSG00000119242.4562.30600186.367101.5931027.6667026.38920HepG2TIAL1
CCDC92ENSG00000119242.4430.08310188.054801.1934016.9709015.73380HepG2TRIM56
CCDC92ENSG00000119242.4489.23860311.718300.650205.188803.95150HepG2TUFM
CCDC92ENSG00000119242.4477.38360613.24510-0.361301.917601.38400HepG2U2AF1
CCDC92ENSG00000119242.41441.31350659.570701.127703.793802.62760HepG2U2AF2
CCDC92ENSG00000119242.4475.44860329.946500.527002.524301.72650HepG2UBE2L3
CCDC92ENSG00000119242.4787.37910615.990200.354102.533201.85980HepG2UPF1
CCDC92ENSG00000119242.4324.92850594.71580-0.8721011.4023010.31890HepG2UTP3
CCDC92ENSG00000119242.4451.49230198.913601.182509.577108.24590HepG2XRN2
CCDC92ENSG00000119242.4632.81730475.539600.412103.185302.47340HepG2ZC3H8
CCDC92ENSG00000119242.41181.03830677.472700.8017020.4172019.26980HepG2ZNF622
CCDC92ENSG00000119242.4152.50240243.18930-0.673202.812702.24040K562AGGF1
CCDC92ENSG00000119242.492.36640253.04810-1.4540011.7166010.24750K562AKAP8L
CCDC92ENSG00000119242.4221.82440123.166300.848704.429302.80260K562APOBEC3C
CCDC92ENSG00000119242.4172.91400101.618400.766803.062802.45200K562AQR
CCDC92ENSG00000119242.4148.45380265.50590-0.838705.889804.49560K562ATP5C1
CCDC92ENSG00000119242.4122.9595066.080400.895803.267802.10170K562CCAR1
CCDC92ENSG00000119242.4103.8981047.036601.143204.314802.97060K562DDX3X
CCDC92ENSG00000119242.4499.73910162.533101.6203028.8562026.96150K562DDX47
CCDC92ENSG00000119242.4135.60940272.30610-1.005808.156106.51130K562DKC1
CCDC92ENSG00000119242.4117.2095038.457401.607707.138905.61380K562EFTUD2
CCDC92ENSG00000119242.4182.71520103.532900.819404.341303.46820K562EIF2S2
CCDC92ENSG00000119242.4229.4945067.215101.771509.990308.05840K562EIF3A
CCDC92ENSG00000119242.4124.0115041.188601.590105.746504.18120K562EIF3D
CCDC92ENSG00000119242.481.7031043.673100.903502.359901.62200K562EIF3G
CCDC92ENSG00000119242.4223.10150139.588900.676403.270502.25160K562EIF4G2
CCDC92ENSG00000119242.4109.7293057.627600.929003.016501.82840K562FKBP4
CCDC92ENSG00000119242.4404.25180201.951801.001105.331804.13930K562FMR1
CCDC92ENSG00000119242.4253.38420137.993100.876604.978703.96670K562GRSF1
CCDC92ENSG00000119242.4310.8267066.399502.2268024.9085023.19200K562HNRNPC
CCDC92ENSG00000119242.4134.5694059.289301.182405.189803.56090K562HNRNPF
CCDC92ENSG00000119242.4269.11970167.390900.684902.519001.75610K562HSPD1
CCDC92ENSG00000119242.477.2045037.126401.056103.314801.97810K562IGF2BP3
CCDC92ENSG00000119242.4164.99500268.55190-0.702802.056801.35600K562KIF1C
CCDC92ENSG00000119242.471.0913038.374500.889402.252401.49030K562MAGOH
CCDC92ENSG00000119242.4328.03130184.976400.826404.157203.07090K562METAP2
CCDC92ENSG00000119242.4187.92720126.621300.569602.518401.74570K562MTPAP
CCDC92ENSG00000119242.466.8324034.148100.968602.269001.38790K562PCBP2
CCDC92ENSG00000119242.4654.24700155.160802.0760013.0948011.30010K562PCBP3
CCDC92ENSG00000119242.4506.35840119.024902.0888036.7031034.18500K562POLR2G
CCDC92ENSG00000119242.490.2496037.423201.269903.738102.86600K562PRPF8
CCDC92ENSG00000119242.4254.60210152.298200.741203.704302.76280K562PUF60
CCDC92ENSG00000119242.4274.70400158.720000.791304.754203.48450K562PUM2
CCDC92ENSG00000119242.485.24350250.96370-1.5578010.977309.94440K562PUS1
CCDC92ENSG00000119242.4100.97270244.51850-1.276009.736908.64990K562RBM15
CCDC92ENSG00000119242.4127.3962037.630001.759309.684707.58210K562NELFE
CCDC92ENSG00000119242.4171.8190038.128702.1718011.659809.95840K562RPS19
CCDC92ENSG00000119242.4321.47540148.655201.112606.298503.85920K562RPS3A
CCDC92ENSG00000119242.4184.2360058.649701.651304.101402.85450K562RPS3
CCDC92ENSG00000119242.482.0864036.249801.179103.317802.19710K562SUPV3L1
CCDC92ENSG00000119242.4160.1255036.992302.1138014.7261012.83870K562TARDBP
CCDC92ENSG00000119242.498.3558035.681701.462705.757704.51060K562TIA1
CCDC92ENSG00000119242.4128.4527057.261201.165504.646603.40910K562TIAL1
CCDC92ENSG00000119242.4116.1452060.824500.933103.227102.18700K562TRIM56
CCDC92ENSG00000119242.4197.58170112.802900.808503.696801.62050K562TRNAU1AP
CCDC92ENSG00000119242.4115.5538038.357901.590906.778505.10320K562UCHL5
CCDC92ENSG00000119242.4227.16880132.734700.775102.390201.59950K562WDR43
CCDC92ENSG00000119242.4180.87050114.481600.659702.851801.97370K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CCDC92 is not available on ENCORE database.





6 RBPs can affect the splicing of CCDC92 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECCDC92ENSG00000119242.4chr12-1244288181244289011244278931244280401244570751244573780.585000.000220.06033includedHepG2EFTUD2
SECCDC92ENSG00000119242.4chr12-1244288181244289111244278931244280401244570751244573710.455000.001190.02929includedHepG2SRSF1
SECCDC92ENSG00000119242.4chr12-1244408301244409911244288161244289111244570751244573780.201000.002400.05424includedK562AGGF1
SECCDC92ENSG00000119242.4chr12-1244288181244289011244278931244280401244570751244573780.672000.000170.04463includedHepG2EIF3D
SECCDC92ENSG00000119242.4chr12-1244288181244289111244278931244280401244570751244573710.496000.000400.08360includedHepG2FUBP3
SECCDC92ENSG00000119242.4chr12-1244288181244289111244278931244280401244570751244573710.375000.001880.09663includedHepG2SRSF9

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CCDC92 is not avaliable on ENCORE database.