RPS18

General Information

Gene Name : RPS18
Gene ID : ENSG00000231500.6
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RPS18)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RPS18	ENSG00000231500.6	5608.20	5193.71	5400.95	ENCSR000AEF
HepG2	RPS18	ENSG00000231500.6	5078.01	3772.32	4425.16	ENCSR985KAT
K562	RPS18	ENSG00000231500.6	4709.47	4311.06	4510.27	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RPS18 is not avaliable on ENCORE database.

Proteins bound to RNA

RPS18 RNA is bound by 23 proteins.

CanvasJS.com

eCLIP assay for RPS18 is not avaliable on ENCORE database.

23 proteins are bound to RPS18 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	33243587	33243596	+	3'-UTR,CDS	5.45320	400.00000	K562	LIN28B
chr6	33243753	33243766	+	3'-UTR,CDS	3.72008	400.00000	K562	YBX3
chr6	33243741	33243743	+	3'-UTR,CDS,intron-Proximal	3.25247	400.00000	K562	YBX3
chr6	33243578	33243587	+	3'-UTR,CDS	3.25148	400.00000	K562	YBX3
chr6	33243610	33243615	+	3'-UTR,CDS	5.70806	400.00000	K562	LIN28B
chr6	33243747	33243784	+	3'-UTR,CDS	3.57028	400.00000	K562	PABPC4
chr6	33243607	33243612	+	3'-UTR,CDS	3.04847	400.00000	K562	YBX3
chr6	33243615	33243617	+	3'-UTR,CDS	5.64165	400.00000	K562	LIN28B
chr6	33243743	33243747	+	3'-UTR,CDS	3.31774	400.00000	K562	YBX3
chr6	33243575	33243587	+	3'-UTR,CDS	4.33053	400.00000	K562	PABPC4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 183 entries

eCLIP assay for RPS18 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RPS18 is not available on ENCORE database.
139 RBPs can affect the levels of RPS18.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RPS18 is not available on ENCORE database.

139 RBPs can affect the gene expression of RPS18 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RPS18	ENSG00000231500.2	18652.60970	53191.66810	-1.51180	188.46960	186.20020	HepG2	SRSF1
RPS18	ENSG00000231500.2	17760.20670	54473.96130	-1.61690	177.85660	175.27990	HepG2	NELFE
RPS18	ENSG00000231500.2	15968.23740	48948.32220	-1.61610	166.81690	164.21350	HepG2	PTBP1
RPS18	ENSG00000231500.2	17053.81150	41591.55320	-1.28620	109.67780	106.96200	HepG2	ETF1
RPS18	ENSG00000231500.2	20156.37540	53010.13400	-1.39500	87.63230	84.99340	HepG2	QKI
RPS18	ENSG00000231500.2	23855.66670	50736.58230	-1.08870	86.56420	84.16400	HepG2	RECQL
RPS18	ENSG00000231500.2	24547.22360	50959.74810	-1.05380	80.69260	78.37040	HepG2	SF3B4
RPS18	ENSG00000231500.2	24523.98140	48103.71950	-0.97200	65.81070	63.58230	HepG2	PCBP1
RPS18	ENSG00000231500.2	18233.12570	34088.82850	-0.90270	61.68450	60.05750	HepG2	SSB
RPS18	ENSG00000231500.2	4948.40360	12062.29020	-1.28550	59.03540	57.28900	HepG2	TIAL1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 162 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RPS18 is not available on ENCORE database.

26 RBPs can affect the splicing of RPS18 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	is_included	Cell Line	Affected by RBP
SE	RPS18	ENSG00000231500.2	chr6	+	33243587	33243660			33240363	33240503	33243741	33244287	-0.06800	excluded	K562	PCBP1
SE	RPS18	ENSG00000231500.2	chr6	+	33243587	33243660			33240363	33240503	33243741	33244287	-0.09000	excluded	HepG2	GRWD1
SE	RPS18	ENSG00000231500.2	chr6	+	33240330	33240466			33239851	33239899	33243573	33243660	0.87500	included	K562	AQR
SE	RPS18	ENSG00000231500.2	chr6	+	33243473	33243660			33240363	33240503	33243741	33244044	-0.07100	excluded	K562	TBRG4
SE	RPS18	ENSG00000231500.2	chr6	+	33243587	33243660			33240363	33240503	33243741	33244287	-0.05800	excluded	K562	TARDBP
SE	RPS18	ENSG00000231500.2	chr6	+	33243587	33243660			33240363	33240503	33243741	33244287	-0.08300	excluded	K562	SERBP1
A3SS	RPS18	ENSG00000231500.2	chr6	+	33240330	33240503			33240363	33240503	33239851	33239899	0.14200	longer	K562	AQR
RI	RPS18	ENSG00000231500.2	chr6	+	33243741	33244287			33243741	33243843	33244167	33244287	0.27000	included	HepG2	RBM22
RI	RPS18	ENSG00000231500.2	chr6	+	33243741	33244287			33243741	33243843	33244167	33244287	-0.37500	excluded	K562	TARDBP
MXE	RPS18	ENSG00000231500.2	chr6	+	33243741	33243843	33243952	33244044	33240363	33240503	33244167	33244287	-0.10500	2included	HepG2	AGGF1

Showing 1 to 10 of 43 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RPS18

General Information

Functions

Localization

Domains (AlphaFold: RPS18)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RPS18 is not avaliable on ENCORE database.

23 proteins are bound to RPS18 RNA:

eCLIP assay for RPS18 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RPS18 is not available on ENCORE database.

139 RBPs can affect the gene expression of RPS18 :

The Knockdown/knockout RNA-Seq assay for RPS18 is not available on ENCORE database.

26 RBPs can affect the splicing of RPS18 :

The Knockdown/knockout RNA-Seq assay for RPS18 is not avaliable on ENCORE database.