MITD1

General Information

Gene Name       : MITD1
Gene ID             : ENSG00000158411.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MITD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MITD1ENSG00000158411.1157.2450.5953.92ENCSR000AEF
HepG2MITD1ENSG00000158411.1129.5352.7041.12ENCSR985KAT
K562MITD1ENSG00000158411.1126.4429.0727.76ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MITD1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MITD1 RNA is bound by 9 proteins.  







eCLIP assay for MITD1 is not avaliable on ENCORE database.





9 proteins are bound to MITD1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr29978586599785940-3'-UTR,CDS,intron-Distal,intron-Proximal3.797217.04237K562PRPF8
chr29979037499790441-3'-UTR,CDS,intron-Distal,intron-Proximal4.220583.59941K562UCHL5
chr29979031499790380-3'-UTR,CDS,intron-Distal,intron-Proximal4.7218310.08262K562AQR
chr29979039199790443-3'-UTR,CDS,intron-Distal4.215073.45943HepG2BCLAF1
chr29978579999785866-3'-UTR,CDS,intron-Distal,intron-Proximal3.189873.71253K562LIN28B
chr29979737799797493-5'-UTR,CDS,intron-Distal,intron-Proximal4.4774110.74107HepG2NCBP2
chr29978801999788116-CDS,intron-Distal,intron-Proximal3.284413.13705K562BUD13
chr29978796499788067-CDS,intron-Distal,intron-Proximal4.450118.41475HepG2BCLAF1
chr29978702199787121-CDS,intron-Distal,intron-Proximal3.863284.06757K562UCHL5
chr29978815899788309-intron-Distal,intron-Proximal4.166263.90026K562KHSRP
chr29978961899789712-intron-Distal,intron-Proximal3.945918.80564HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MITD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MITD1 is not available on ENCORE database.

  • 39 RBPs can affect the levels of MITD1.  








The Knockdown/knockout RNA-Seq assay for MITD1 is not available on ENCORE database.





39 RBPs can affect the gene expression of MITD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MITD1ENSG00000158411.6487.58670361.774200.430502.478001.46040HepG2AATF
MITD1ENSG00000158411.6725.25600529.637300.453402.492801.98560HepG2AKAP1
MITD1ENSG00000158411.6453.47110658.78730-0.538805.932304.98890HepG2AUH
MITD1ENSG00000158411.6312.72790550.39360-0.815607.449106.52510HepG2BOP1
MITD1ENSG00000158411.6557.50290416.355200.421102.376601.65480HepG2CIRBP
MITD1ENSG00000158411.6364.34220505.30460-0.471902.763402.07700HepG2CPSF6
MITD1ENSG00000158411.6569.53410761.25360-0.418604.311903.54170HepG2CELF1
MITD1ENSG00000158411.6701.62840818.69240-0.222602.070601.41600HepG2DAZAP1
MITD1ENSG00000158411.6300.66680447.78170-0.574604.774803.87340HepG2DNAJC21
MITD1ENSG00000158411.6292.66050418.98940-0.517702.751602.15990HepG2EIF2S1
MITD1ENSG00000158411.6551.24190773.60970-0.488903.980303.01550HepG2EIF4G2
MITD1ENSG00000158411.6307.56830572.83870-0.897205.970805.05580HepG2GPKOW
MITD1ENSG00000158411.6627.54130452.071100.473103.155302.47160HepG2HNRNPA1
MITD1ENSG00000158411.6381.39250502.83380-0.398802.179401.55580HepG2HNRNPC
MITD1ENSG00000158411.6335.49200430.16890-0.358602.100501.46330HepG2IGF2BP1
MITD1ENSG00000158411.6288.93500379.18490-0.392202.622401.62800HepG2KIF1C
MITD1ENSG00000158411.6337.88710469.92200-0.475902.302101.72340HepG2MATR3
MITD1ENSG00000158411.6545.13020774.89530-0.507404.666203.91560HepG2PUF60
MITD1ENSG00000158411.6675.54840822.53430-0.284003.083802.46630HepG2PUM1
MITD1ENSG00000158411.6669.82420821.96540-0.295302.287401.67530HepG2PUM2
MITD1ENSG00000158411.6752.34580594.564500.339502.543101.71790HepG2RBM15
MITD1ENSG00000158411.6618.05190480.406200.363402.658202.12550HepG2NELFE
MITD1ENSG00000158411.6293.82640381.55760-0.376901.853601.34070HepG2RPS19
MITD1ENSG00000158411.6349.71700444.84290-0.347102.315901.71780HepG2SAFB2
MITD1ENSG00000158411.6272.89390382.96660-0.488902.528601.62780HepG2SERBP1
MITD1ENSG00000158411.6535.64630742.89850-0.471905.877404.91730HepG2SLBP
MITD1ENSG00000158411.6586.13360469.100000.321202.208401.77310HepG2SRSF1
MITD1ENSG00000158411.6483.40520765.03480-0.662309.553208.48430HepG2SRSF5
MITD1ENSG00000158411.6292.65320418.75770-0.516903.073802.08780HepG2SUPT6H
MITD1ENSG00000158411.6529.24960421.648500.327802.008301.51770HepG2TAF15
MITD1ENSG00000158411.6355.56740489.70350-0.461803.949503.29980HepG2TRIM56
MITD1ENSG00000158411.6524.14560756.95610-0.530203.625702.61160HepG2TUFM
MITD1ENSG00000158411.6361.40580234.578800.623404.170603.23830HepG2UCHL5
MITD1ENSG00000158411.6539.71210363.687100.569402.653601.67060HepG2UPF2
MITD1ENSG00000158411.6561.68970390.852100.523103.651502.82780HepG2XRN2
MITD1ENSG00000158411.6526.70130399.634600.398203.233502.51740HepG2ZC3H8
MITD1ENSG00000158411.6630.68030518.888500.281402.057701.55480K562AGGF1
MITD1ENSG00000158411.6227.85900323.41850-0.505303.238701.97010K562EIF4B
MITD1ENSG00000158411.6739.02360572.976800.367002.130201.41660K562KIF1C
MITD1ENSG00000158411.6343.76540482.37760-0.488702.832601.89810K562MATR3
MITD1ENSG00000158411.6315.18790469.54720-0.575103.707502.94990K562PTBP1
MITD1ENSG00000158411.61381.357501003.738600.460602.837602.01070K562PUF60
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MITD1 is not available on ENCORE database.





33 RBPs can affect the splicing of MITD1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMITD1ENSG00000158411.6chr2-9978780599787892997869999978711599787972997881090.127000.001910.03517includedK562SRSF1
SEMITD1ENSG00000158411.6chr2-997878059978789299786999997871159978797299788109-0.348000.000000.00005excludedK562SF3B4
SEMITD1ENSG00000158411.6chr2-997878059978789299786999997871159978797299788123-0.304000.000100.00600excludedK562PRPF8
SEMITD1ENSG00000158411.6chr2-997878059978789299786999997871159978797299788123-0.702000.000000.00000excludedHepG2U2AF1
SEMITD1ENSG00000158411.6chr2-997878059978789299786999997871159978797299788109-0.285000.000000.00017excludedHepG2PRPF8
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.064000.000010.00602includedK562PUM1
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.283000.000000.00000includedHepG2HNRNPK
SEMITD1ENSG00000158411.6chr2-997878059978789299786999997871159978797299788109-0.821000.000000.00000excludedHepG2U2AF2
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904700.132000.000250.06010includedK562METAP2
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.080000.000350.00497includedK562AQR
SEMITD1ENSG00000158411.6chr2-997878059978789299786997997871159978797299788109-0.312000.000000.00000excludedK562AQR
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.094000.001260.08119includedHepG2DDX3X
SEMITD1ENSG00000158411.6chr2-997879729978810999786999997871159979037799790479-0.120000.003030.04220excludedK562PUS1
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.142000.000030.03407includedHepG2HLTF
SEMITD1ENSG00000158411.6chr2-997878059978789299786999997871159978797299788123-0.324000.000210.01536excludedK562EFTUD2
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.105000.001090.04557includedHepG2MATR3
SEMITD1ENSG00000158411.6chr2-997878059978789299786999997871159978797299788109-0.491000.000000.00000excludedK562U2AF1
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.155000.000010.00162includedHepG2PCBP2
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.149000.000010.00190includedHepG2IGF2BP3
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.061000.000280.04946includedK562EIF4G2
SEMITD1ENSG00000158411.6chr2-997898769978996599787972997881099979037799790479-0.097000.000760.09817excludedK562SRSF7
SEMITD1ENSG00000158411.6chr2-997878059978789299786999997871159978797299788109-0.570000.000000.00000excludedK562U2AF2
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.081000.000530.02286includedK562TARDBP
SEMITD1ENSG00000158411.6chr2-997878059978789299786999997871159978797299788123-0.187000.002140.04832excludedK562RBM15
SEMITD1ENSG00000158411.6chr2-997878059978789299786999997871159978797299788109-0.250000.000570.01780excludedK562AGGF1
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.139000.000130.03740includedHepG2EIF3D
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.135000.000010.00073includedK562HNRNPK
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.093000.001860.09603includedHepG2SRSF9
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.167000.000010.00341includedK562EIF3G
SEMITD1ENSG00000158411.6chr2-9978987699789965997879729978810999790377997904790.082000.001300.02392includedK562HNRNPC
A5SSMITD1ENSG00000158411.6chr2-997878059979047999790377997904799978699999787115-0.209000.003300.09957shorterK562PUS1
RIMITD1ENSG00000158411.6chr2-9978572599786073997857259978593399786012997860730.179000.000010.00269includedHepG2SFPQ
RIMITD1ENSG00000158411.6chr2-9978572599786073997857259978593399786012997860730.246000.000250.02211includedHepG2TBRG4
RIMITD1ENSG00000158411.6chr2-9978572599786073997857259978593399786012997860730.156000.000130.01738includedK562HNRNPU
RIMITD1ENSG00000158411.6chr2-9978572599786073997857259978593399786012997860730.464000.000040.00054includedHepG2U2AF2
RIMITD1ENSG00000158411.6chr2-9978572599786073997857259978593399786012997860730.235000.000160.00673includedHepG2UCHL5
RIMITD1ENSG00000158411.6chr2-9978572599786073997857259978593399786012997860730.138000.000400.03003includedHepG2HNRNPUL1
RIMITD1ENSG00000158411.6chr2-9978572599786073997857259978593399786012997860730.289000.000650.00800includedHepG2U2AF1
RIMITD1ENSG00000158411.6chr2-9978572599786073997857259978593399786012997860730.173000.000540.00947includedK562U2AF2
RIMITD1ENSG00000158411.6chr2-9978572599786073997857259978593399786012997860730.182000.010200.08681includedHepG2NCBP2
RIMITD1ENSG00000158411.6chr2-9978572599786073997857259978593399786012997860730.118000.016760.09468includedHepG2SF3B4
RIMITD1ENSG00000158411.6chr2-9978572599786073997857259978593399786012997860730.155000.000550.00393includedK562AQR
MXEMITD1ENSG00000158411.6chr2-9978780599787892997879729978810999786999997871159979037799790479-0.198000.000160.008882includedHepG2PTBP1
MXEMITD1ENSG00000158411.6chr2-99787805997878929978797299788109997869999978711599790377997904790.163000.000090.001071includedK562AQR
MXEMITD1ENSG00000158411.6chr2-99787805997878929978797299788123997869999978711599790377997904790.331000.000000.000001includedK562AQR
MXEMITD1ENSG00000158411.6chr2-9978797299788109997903779979047999786999997871159979729399797513-0.249000.000000.000002includedK562AQR
MXEMITD1ENSG00000158411.6chr2-99787805997878929978797299788109997869999978711599790377997904790.150000.000630.026221includedHepG2SF3A3
MXEMITD1ENSG00000158411.6chr2-99787805997878929978797299788123997869999978711599790377997904790.215000.000000.000031includedHepG2SF3A3
MXEMITD1ENSG00000158411.6chr2-99787805997878929978797299788109997869999978711599790377997904790.509000.000000.000001includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MITD1 is not avaliable on ENCORE database.