ATXN10

General Information

Gene Name       : ATXN10
Gene ID             : ENSG00000130638.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATXN10)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ATXN10ENSG00000130638.16159.18144.13151.66ENCSR000AEF
HepG2ATXN10ENSG00000130638.16119.55119.54119.55ENCSR985KAT
K562ATXN10ENSG00000130638.1663.6973.1468.41ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATXN10 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ATXN10 RNA is bound by 34 proteins.  







eCLIP assay for ATXN10 is not avaliable on ENCORE database.





34 proteins are bound to ATXN10 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr224623969446239835+3'-UTR8.5343359.87367HepG2SUB1
chr224623980646239817+3'-UTR4.943213.95647K562PABPC4
chr224623967946239846+3'-UTR3.115467.29039HepG2DDX55
chr224623981746239835+3'-UTR8.1131337.82103K562PABPC4
chr224623984546239860+3'-UTR8.0107935.96532K562PABPC4
chr224623968746239819+3'-UTR5.1062725.17282K562NOLC1
chr224623983546239845+3'-UTR8.0740536.89305K562PABPC4
chr224606780446067940+5'-UTR4.5927512.33972K562PCBP1
chr224606781446067943+5'-UTR3.8661715.67081HepG2PCBP2
chr224606772346067808+5'-UTR5.2367813.85526HepG2DDX3X
chr224606787846067966+5'-UTR,CDS3.743785.00225K562GEMIN5
chr224608574446085776+CDS,intron-Distal3.512874.09885HepG2BCLAF1
chr224608888646088960+CDS,intron-Proximal3.102543.85381HepG2BCLAF1
chr224613630046136402+CDS3.871728.07380HepG2GRWD1
chr224609862046098645+CDS3.819243.19539K562YBX3
chr224623899446239052+CDS4.238726.65960HepG2BCLAF1
chr224620284446202903+CDS,intron-Proximal4.332984.07825K562YBX3
chr224606804946068144+CDS,intron-Proximal3.403394.99842HepG2PPIG
chr224608557846085636+CDS,intron-Distal,intron-Proximal4.513154.79708HepG2U2AF2
chr224609616146096257+CDS,intron-Proximal4.001223.82297K562NOLC1
chr224608563846085709+CDS,intron-Distal4.3045510.93057K562YBX3
chr224613626546136321+CDS4.145963.68241HepG2G3BP1
chr224623894046238990+CDS3.145963.55800HepG2BCLAF1
chr224609856846098620+CDS,intron-Proximal3.369373.69775K562YBX3
chr224623886946238937+CDS,intron-Proximal3.022873.55392K562YBX3
chr224608889446088955+CDS3.363074.45064HepG2GRWD1
chr224608888646088959+CDS,intron-Proximal3.639236.98305HepG2PPIG
chr224612538946125464+CDS4.482384.69712HepG2G3BP1
chr224613626946136338+CDS3.883053.24150HepG2HLTF
chr224617865446178745+intron-Distal5.051319.59196HepG2CSTF2
chr224607983946079896+intron-Distal3.804799.50395HepG2SUGP2
chr224607782946077872+intron-Distal4.238157.80398HepG2SUGP2
chr224613972346139807+intron-Distal3.264658.28668HepG2SUGP2
chr224607679846076871+intron-Distal4.4188610.14167HepG2SUGP2
chr224607983246079883+intron-Distal3.658524.61322HepG2MATR3
chr224607725946077297+intron-Distal4.724214.66737HepG2MATR3
chr224613984746139926+intron-Distal5.233668.05797HepG2HNRNPM
chr224614845246148508+intron-Distal4.221133.69238K562GTF2F1
chr224610538946105475+intron-Distal4.088734.28663HepG2SUGP2
chr224615297746153088+intron-Distal4.367105.38543HepG2SRSF9
chr224617847246178597+intron-Distal4.182595.57590HepG2CSTF2
chr224613939946139571+intron-Distal3.8345512.78768HepG2SUGP2
chr224616009546160156+intron-Distal4.262574.36307HepG2HNRNPK
chr224623107146231175+intron-Distal6.074799.59911HepG2XPO5
chr224607735146077405+intron-Distal4.0037711.24044HepG2SUGP2
chr224607875346078796+intron-Distal3.176095.10681HepG2SUGP2
chr224615300246153105+intron-Distal3.598284.36184HepG2PRPF4
chr224612217046122236+intron-Distal4.618215.76685K562EXOSC5
chr224607689446076958+intron-Distal4.405379.90310HepG2SUGP2
chr224614244546142508+intron-Distal5.003554.91909K562FMR1
chr224614053246140596+intron-Distal3.684907.15089HepG2HNRNPM
chr224621970246219813+intron-Distal3.616156.91468HepG2HNRNPM
chr224607854146078572+intron-Distal4.562505.58061HepG2SUGP2
chr224614046746140522+intron-Distal3.514954.57452HepG2SUGP2
chr224607544146075573+intron-Distal3.605485.38424HepG2HNRNPL
chr224614244046142556+intron-Distal5.1746930.79558HepG2CSTF2
chr224615834146158383+intron-Distal3.482414.38996HepG2HNRNPM
chr224607778246077869+intron-Distal4.187215.28137HepG2MATR3
chr224620549246205529+intron-Distal3.489893.88460HepG2PCBP2
chr224620125346201308+intron-Distal3.178973.02891HepG2HNRNPL
chr224607037846070416+intron-Distal4.378414.64592HepG2HNRNPM
chr224618652046186595+intron-Distal4.000483.27829HepG2MATR3
chr224620595646206066+intron-Distal3.705366.71596HepG2SUGP2
chr224614903846149096+intron-Distal3.932154.86842HepG2PCBP2
chr224613984346139918+intron-Distal3.281955.07188HepG2MATR3
chr224610167546101741+intron-Distal4.311258.71921HepG2HNRNPM
chr224615961546159666+intron-Distal3.138503.10640HepG2SUGP2
chr224618724746187344+intron-Distal3.008053.95507HepG2SUGP2
chr224621997546220093+intron-Distal3.337514.39142HepG2PCBP2
chr224613984346139920+intron-Distal3.792428.49452HepG2SUGP2
chr224621961946219668+intron-Distal3.868963.24322HepG2MATR3
chr224620544846205492+intron-Distal5.132428.17201HepG2PCBP2
chr224614844646148511+intron-Distal5.127578.29787HepG2PRPF4
chr224620099446201078+intron-Distal3.782965.29549HepG2HNRNPL
chr224607776546077811+intron-Distal3.972516.26907HepG2SUGP2
chr224615950646159548+intron-Distal3.270763.34056HepG2MATR3
chr224618673646186794+intron-Distal3.597277.20487HepG2SUGP2
chr224614987746149977+intron-Distal3.873053.18939HepG2RBFOX2
chr224614845646148503+intron-Distal4.366603.57264HepG2GTF2F1
chr224607726346077305+intron-Distal3.707256.25586HepG2SUGP2
chr224613966746139723+intron-Distal4.846027.09509HepG2SUGP2
chr224621145146211532+intron-Distal4.383675.38389HepG2PCBP2
chr224612318446123303+intron-Distal4.264593.41738HepG2PTBP1
chr224607734946077382+intron-Distal4.265743.27829HepG2MATR3
chr224614066446140707+intron-Distal3.270023.69184HepG2SUGP2
chr224607758746077679+intron-Distal3.426323.94088HepG2QKI
chr224612131046121353+intron-Distal3.846053.01445K562EXOSC5
chr224607770846077765+intron-Distal4.796255.84463HepG2SUGP2
chr224614022546140253+intron-Distal,intron-Proximal4.270764.05620HepG2MATR3
chr224612181646121861+intron-Distal4.575775.12361K562EXOSC5
chr224615265546152824+intron-Distal4.923814.57471HepG2SFPQ
chr224614244546142534+intron-Distal3.062855.12082HepG2CSTF2T
chr224614002146140092+intron-Distal4.196249.06128HepG2SUGP2
chr224620788246207958+intron-Distal3.212093.46325HepG2SUGP2
chr224608022246080274+intron-Distal4.329813.84389HepG2SUGP2
chr224607852946078578+intron-Distal4.265743.27829HepG2MATR3
chr224606884146068976+intron-Distal3.222905.18157HepG2CSTF2
chr224613974646139794+intron-Distal4.263213.24322HepG2MATR3
chr224607821146078274+intron-Distal3.136869.91264HepG2SUGP2
chr224613948846139547+intron-Distal3.123033.72876HepG2MATR3
chr224610272646102799+intron-Distal3.998923.34098HepG2HNRNPM
chr224607812246078170+intron-Distal4.507735.01910HepG2MATR3
chr224606805946068132+intron-Proximal3.917245.56912HepG2AQR
chr224606806646068151+intron-Proximal4.225205.82353HepG2XRN2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATXN10 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATXN10 is not available on ENCORE database.

  • 99 RBPs can affect the levels of ATXN10.  








The Knockdown/knockout RNA-Seq assay for ATXN10 is not available on ENCORE database.





99 RBPs can affect the gene expression of ATXN10 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ATXN10ENSG00000130638.11835.728101306.59680-0.644707.103605.59710HepG2ADAR
ATXN10ENSG00000130638.111875.196502773.41820-0.564606.129504.98240HepG2ASCC1
ATXN10ENSG00000130638.11874.393301473.65350-0.753006.803905.29530HepG2BCCIP
ATXN10ENSG00000130638.111781.602301271.337100.486705.174704.38790HepG2BOP1
ATXN10ENSG00000130638.111526.396001833.55130-0.264503.762903.01010HepG2CKAP4
ATXN10ENSG00000130638.111588.026401339.886100.245002.298401.37110HepG2YBX3
ATXN10ENSG00000130638.111262.60380910.422600.471704.693603.33940HepG2CSTF2
ATXN10ENSG00000130638.111712.281602360.68870-0.463308.030907.04260HepG2CELF1
ATXN10ENSG00000130638.111815.520002758.19610-0.603305.824704.95810HepG2DDX6
ATXN10ENSG00000130638.111364.235901754.56450-0.363005.174604.30050HepG2DKC1
ATXN10ENSG00000130638.111042.755701315.70050-0.335403.625102.82610HepG2DNAJC21
ATXN10ENSG00000130638.111054.480501304.03490-0.306404.090503.32870HepG2DNAJC2
ATXN10ENSG00000130638.112134.512702651.52930-0.312902.186701.65230HepG2EIF2S1
ATXN10ENSG00000130638.114142.989303079.514900.427909.868008.84520HepG2ETF1
ATXN10ENSG00000130638.112132.384601792.093000.250702.039801.32450HepG2EWSR1
ATXN10ENSG00000130638.112240.802702956.49280-0.399903.392002.63040HepG2FXR1
ATXN10ENSG00000130638.111810.015802742.58710-0.599506.208805.23120HepG2G3BP1
ATXN10ENSG00000130638.111112.426201621.47080-0.543603.252202.14410HepG2GNB2L1
ATXN10ENSG00000130638.111055.351301328.30470-0.331902.660902.02510HepG2HNRNPA1
ATXN10ENSG00000130638.111941.367102777.10270-0.516506.028205.02640HepG2HNRNPK
ATXN10ENSG00000130638.112045.863202312.00900-0.176402.027901.43900HepG2HNRNPL
ATXN10ENSG00000130638.111703.966301262.567100.432403.667902.95290HepG2HNRNPLL
ATXN10ENSG00000130638.11951.316901235.96900-0.377603.468802.41120HepG2HNRNPM
ATXN10ENSG00000130638.11828.895901467.71060-0.8243020.9373019.37570HepG2HNRNPU
ATXN10ENSG00000130638.111866.038702787.78220-0.579106.419905.42970HepG2IGF2BP2
ATXN10ENSG00000130638.111215.206701499.22050-0.303004.353103.45320HepG2ILF2
ATXN10ENSG00000130638.111455.634101676.44820-0.203802.373001.42800HepG2KIF1C
ATXN10ENSG00000130638.111006.228201668.13010-0.729304.940503.30700HepG2LIN28B
ATXN10ENSG00000130638.112168.747502957.52490-0.447503.981003.19470HepG2MAGOH
ATXN10ENSG00000130638.112358.915502974.07980-0.334302.226701.65730HepG2MATR3
ATXN10ENSG00000130638.112140.640303044.13770-0.508004.833604.01000HepG2NCBP2
ATXN10ENSG00000130638.112000.422202516.83350-0.331303.881002.97740HepG2NOL12
ATXN10ENSG00000130638.11926.105801294.22130-0.482802.258601.47070HepG2PABPC1
ATXN10ENSG00000130638.112199.448802711.01070-0.301702.020501.39490HepG2PABPC4
ATXN10ENSG00000130638.111198.007701452.80190-0.278203.022802.14110HepG2PARN
ATXN10ENSG00000130638.111030.396902733.11100-1.4073072.4857070.14460HepG2PCBP1
ATXN10ENSG00000130638.111033.147801707.38340-0.724705.650704.21090HepG2PCBP2
ATXN10ENSG00000130638.111820.122301376.164100.403306.252305.14110HepG2PRPF4
ATXN10ENSG00000130638.11872.731302781.03170-1.6720094.0746092.00900HepG2PTBP1
ATXN10ENSG00000130638.111813.563302402.58490-0.405804.383903.65380HepG2PUF60
ATXN10ENSG00000130638.11710.319501867.96120-1.3949065.2086063.06190HepG2PUS1
ATXN10ENSG00000130638.112545.518503011.94930-0.242702.563101.95790HepG2QKI
ATXN10ENSG00000130638.111541.841702054.89750-0.414405.405704.25430HepG2RBM15
ATXN10ENSG00000130638.112312.827602733.52880-0.241102.063601.47580HepG2RBM25
ATXN10ENSG00000130638.112262.072703095.03030-0.452309.566608.66940HepG2NELFE
ATXN10ENSG00000130638.112385.253402882.58370-0.273204.005603.28180HepG2RECQL
ATXN10ENSG00000130638.11839.335501096.57840-0.385703.343202.67570HepG2RPS19
ATXN10ENSG00000130638.11842.737101105.94610-0.392102.072001.38290HepG2RRP9
ATXN10ENSG00000130638.111663.054502895.43250-0.7999026.9806025.45840HepG2SF3B4
ATXN10ENSG00000130638.111931.119402303.81720-0.254603.686302.89530HepG2SLBP
ATXN10ENSG00000130638.11583.691801607.51720-1.4616010.237407.43780HepG2SLTM
ATXN10ENSG00000130638.112598.127703022.19670-0.218103.029502.53970HepG2SRSF1
ATXN10ENSG00000130638.112010.673902372.26850-0.238602.810502.17960HepG2SRSF5
ATXN10ENSG00000130638.111215.866901431.46330-0.235502.524101.85660HepG2SRSF7
ATXN10ENSG00000130638.111635.468302458.71110-0.5882015.8260014.70030HepG2SRSF9
ATXN10ENSG00000130638.11589.716001196.46380-1.0207010.113607.94740HepG2STAU1
ATXN10ENSG00000130638.11917.298101236.59520-0.430902.619401.55280HepG2STIP1
ATXN10ENSG00000130638.112270.038302697.86640-0.249103.675502.97620HepG2SUCLG1
ATXN10ENSG00000130638.111471.721001209.577600.282902.333101.46430HepG2SUPT6H
ATXN10ENSG00000130638.111102.025401532.43790-0.475704.474903.68510HepG2U2AF1
ATXN10ENSG00000130638.112000.687302484.65340-0.312502.010801.30260HepG2UBE2L3
ATXN10ENSG00000130638.111461.432301734.93120-0.247502.926502.21130HepG2UPF1
ATXN10ENSG00000130638.111222.777801675.00760-0.454007.985907.05230HepG2UTP3
ATXN10ENSG00000130638.11596.919902005.61240-1.7484047.2040045.03800K562AQR
ATXN10ENSG00000130638.11718.407501057.22190-0.557407.483505.21200K562BCCIP
ATXN10ENSG00000130638.11761.236801021.59510-0.424405.042803.73160K562BCLAF1
ATXN10ENSG00000130638.11430.85650785.08760-0.865609.117407.48550K562BOP1
ATXN10ENSG00000130638.11783.536501396.39640-0.833605.840804.23740K562CNOT7
ATXN10ENSG00000130638.11493.78070834.79130-0.757509.411307.94570K562CPSF6
ATXN10ENSG00000130638.112043.543802619.45110-0.358204.494403.24180K562CELF1
ATXN10ENSG00000130638.111926.590101492.145900.368605.574004.69710K562DDX47
ATXN10ENSG00000130638.11457.98160880.06750-0.9423010.405108.52550K562EFTUD2
ATXN10ENSG00000130638.11817.943301017.17690-0.314503.078401.79100K562EIF2S1
ATXN10ENSG00000130638.111123.36150910.010300.303802.480301.72630K562EIF3G
ATXN10ENSG00000130638.11543.80970967.47970-0.8311011.136209.46600K562EIF4A3
ATXN10ENSG00000130638.11641.47200871.27120-0.441704.567003.01900K562EIF4B
ATXN10ENSG00000130638.11615.49120808.71990-0.393903.237201.85280K562EXOSC5
ATXN10ENSG00000130638.11556.60150849.34570-0.609705.534404.31570K562FMR1
ATXN10ENSG00000130638.11457.59750719.88210-0.653705.389004.06770K562FTO
ATXN10ENSG00000130638.11785.165001006.13870-0.357803.498902.83030K562FXR1
ATXN10ENSG00000130638.11454.77790797.03450-0.809509.465907.98770K562GPKOW
ATXN10ENSG00000130638.111265.241101527.50190-0.271802.072601.41150K562GRSF1
ATXN10ENSG00000130638.11930.516501343.43840-0.529806.499004.89790K562HNRNPA1
ATXN10ENSG00000130638.11346.52400872.78090-1.3327023.7632022.08420K562HNRNPC
ATXN10ENSG00000130638.111072.024501348.53470-0.331102.798701.73650K562HNRNPL
ATXN10ENSG00000130638.11451.67740834.33900-0.885308.903807.05540K562HNRNPM
ATXN10ENSG00000130638.11912.213601487.72080-0.7057013.0266011.13690K562HNRNPU
ATXN10ENSG00000130638.11339.46760680.53060-1.003408.603606.84220K562KRR1
ATXN10ENSG00000130638.11622.70430845.12750-0.440603.470201.87360K562LARP7
ATXN10ENSG00000130638.11616.21200885.16390-0.522504.073302.21390K562LIN28B
ATXN10ENSG00000130638.11921.383801338.28130-0.538506.338405.04390K562MAGOH
ATXN10ENSG00000130638.11527.22700777.98860-0.561305.247004.01690K562METAP2
ATXN10ENSG00000130638.11788.091601116.65410-0.502707.467306.19570K562MTPAP
ATXN10ENSG00000130638.11899.357401240.68920-0.464208.301007.10680K562NSUN2
ATXN10ENSG00000130638.11893.633101341.52490-0.586103.460002.06180K562PABPC1
ATXN10ENSG00000130638.11701.768801190.76600-0.7628010.370908.43130K562PCBP2
ATXN10ENSG00000130638.11560.95610782.53500-0.480303.828502.73960K562PSIP1
ATXN10ENSG00000130638.11559.385701300.21300-1.2168028.3115026.28170K562PTBP1
ATXN10ENSG00000130638.111670.302302324.19650-0.476605.357304.22530K562PUF60
ATXN10ENSG00000130638.112020.438202422.20780-0.261703.077102.06760K562PUM2
ATXN10ENSG00000130638.11519.069301420.19940-1.4521030.2235028.40740K562PUS1
ATXN10ENSG00000130638.11807.004201246.82990-0.627607.366005.90910K562RBM22
ATXN10ENSG00000130638.11559.31000713.94000-0.352202.356301.44560K562RCC2
ATXN10ENSG00000130638.11949.158101224.26420-0.367204.227703.23460K562SF3A3
ATXN10ENSG00000130638.11404.74190757.95610-0.905108.773206.97020K562SF3B1
ATXN10ENSG00000130638.11629.359401004.69600-0.674809.445607.81400K562SF3B4
ATXN10ENSG00000130638.11894.848701448.15460-0.694502.932001.57260K562SFPQ
ATXN10ENSG00000130638.11684.23090932.24110-0.446204.507702.24780K562SLTM
ATXN10ENSG00000130638.11874.310601363.37870-0.641002.469401.33680K562SNRNP200
ATXN10ENSG00000130638.111027.211601254.28690-0.288103.333602.31670K562SRPK2
ATXN10ENSG00000130638.11909.170501274.62560-0.487505.431004.44710K562SRSF1
ATXN10ENSG00000130638.11544.54660830.24210-0.608507.791405.83720K562SRSF7
ATXN10ENSG00000130638.11807.102801217.04100-0.592602.758501.51120K562STAU1
ATXN10ENSG00000130638.11395.40220829.39930-1.068709.864907.88280K562SUPV3L1
ATXN10ENSG00000130638.11971.523401290.04010-0.409103.275202.50410K562TARDBP
ATXN10ENSG00000130638.11525.72250755.91910-0.523903.518901.62510K562TFIP11
ATXN10ENSG00000130638.11593.06110799.59060-0.431103.205002.17060K562TRIM56
ATXN10ENSG00000130638.111000.424501315.53020-0.395005.514804.54020K562UPF1
ATXN10ENSG00000130638.11956.929101331.40970-0.476503.698202.29900K562UTP3
ATXN10ENSG00000130638.111368.882001170.563700.225702.352201.56720K562WDR43
ATXN10ENSG00000130638.11652.08600893.58210-0.454503.153001.83040K562XRN2
ATXN10ENSG00000130638.111770.529902259.33290-0.351703.297402.34600K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ATXN10 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ATXN10 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ATXN10 is not avaliable on ENCORE database.