NPAS2

General Information

Gene Name       : NPAS2
Gene ID             : ENSG00000170485.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NPAS2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NPAS2ENSG00000170485.160.000.000.00ENCSR000AEF
HepG2NPAS2ENSG00000170485.1638.9222.6430.78ENCSR985KAT
K562NPAS2ENSG00000170485.160.000.050.03ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NPAS2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NPAS2 RNA is bound by 53 proteins.  







eCLIP assay for NPAS2 is not avaliable on ENCORE database.





53 proteins are bound to NPAS2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2101613051101613149+3'-UTR4.677054.32097HepG2FUBP3
chr2101612244101612289+3'-UTR,CDS,intron-Proximal3.223445.70281HepG2U2AF2
chr2101613060101613162+3'-UTR3.199303.79688HepG2ZC3H11A
chr2101612199101612288+3'-UTR,CDS,intron-Proximal4.709724.62947HepG2AQR
chr2101436630101436707+5'-UTR3.075517.08793HepG2PRPF4
chr2101436634101436706+5'-UTR3.0368615.23566HepG2FAM120A
chr2101521187101521322+5'-UTR,CDS,intron-Proximal3.181339.91360HepG2BUD13
chr2101436874101436959+5'-UTR,intron-Proximal3.139778.13276HepG2XRN2
chr2101436647101436711+5'-UTR3.634138.75653HepG2DDX3X
chr2101436734101436791+5'-UTR4.034266.30673HepG2DDX3X
chr2101436632101436715+5'-UTR4.2109537.38264HepG2CSTF2T
chr2101436629101436665+5'-UTR3.698777.95694HepG2NKRF
chr2101436809101436866+5'-UTR3.6604517.91268HepG2CSTF2T
chr2101604539101604622+CDS,intron-Distal,intron-Proximal4.469124.94878HepG2GRWD1
chr2101609837101609974+CDS3.982826.99061HepG2PABPN1
chr2101541720101541757+CDS,intron-Proximal3.277566.42383HepG2GRWD1
chr2101611855101611876+CDS,intron-Distal,intron-Proximal4.604434.28193HepG2AQR
chr2101437496101437553+CDS,intron-Distal3.494946.76053HepG2FUS
chr2101609931101610046+CDS,intron-Proximal4.0389627.56620HepG2PRPF8
chr2101598783101598907+CDS,intron-Proximal3.027118.72656HepG2PPIG
chr2101554200101554258+CDS,intron-Proximal3.857187.37475HepG2U2AF2
chr2101554248101554341+CDS,intron-Proximal5.5355120.46330HepG2PRPF8
chr2101607249101607338+CDS,intron-Distal,intron-Proximal3.4654410.64832HepG2PPIG
chr2101611946101612013+CDS,intron-Distal3.065763.14359HepG2HNRNPK
chr2101437570101437621+CDS,intron-Distal3.0884813.16547HepG2CSTF2T
chr2101549413101549485+CDS,intron-Proximal3.454267.99874HepG2BUD13
chr2101604622101604702+CDS,intron-Distal4.011083.14999HepG2GRWD1
chr2101541641101541720+CDS4.5277210.74047HepG2GRWD1
chr2101598698101598770+CDS3.331566.65904HepG2GRWD1
chr2101549370101549375+CDS,intron-Proximal3.630085.58683HepG2GRWD1
chr2101549439101549499+CDS,intron-Proximal4.999847.79098HepG2PRPF8
chr2101549370101549474+CDS,intron-Proximal3.0374012.11368HepG2PPIG
chr2101611860101611869+CDS,intron-Distal,intron-Proximal4.380859.38298HepG2PRPF8
chr2101584887101584935+CDS,intron-Proximal3.445218.51251HepG2PRPF8
chr2101611876101611924+CDS,intron-Distal3.785723.67894HepG2AQR
chr2101604717101604800+CDS,intron-Distal,intron-Proximal3.603069.52799HepG2BUD13
chr2101591992101592083+CDS,intron-Proximal3.8616410.79642HepG2PRPF8
chr2101437508101437537+CDS,intron-Distal3.962683.63122HepG2PRPF4
chr2101606839101606908+CDS,intron-Distal3.476817.51172HepG2PPIG
chr2101604524101604592+CDS,intron-Distal,intron-Proximal3.677999.40404HepG2BUD13
chr2101580605101580681+CDS,intron-Distal,intron-Proximal4.2703517.68873HepG2PRPF8
chr2101606697101606760+CDS,intron-Distal,intron-Proximal3.587754.40430HepG2AQR
chr2101582169101582242+CDS,intron-Distal,intron-Proximal3.673085.93218HepG2SRSF1
chr2101598793101598879+CDS,intron-Proximal4.1037447.05930HepG2PRPF8
chr2101580571101580634+CDS,intron-Distal3.381205.90680HepG2PPIG
chr2101594188101594287+CDS,intron-Proximal3.2627519.82269HepG2PRPF8
chr2101591402101591456+CDS,intron-Proximal3.6663210.01959HepG2PRPF8
chr2101437509101437558+CDS,intron-Distal3.464093.40381HepG2DROSHA
chr2101611869101611901+CDS,intron-Distal5.1145912.77088HepG2PRPF8
chr2101437559101437621+CDS,intron-Distal3.410328.36677HepG2SFPQ
chr2101466650101466687+intron-Distal6.0251347.35529HepG2QKI
chr2101458108101458226+intron-Distal3.3508122.91186HepG2CDC40
chr2101458264101458286+intron-Distal5.6622486.86742HepG2HNRNPL
chr2101494566101494675+intron-Distal3.672094.88610HepG2SRSF9
chr2101605134101605229+intron-Distal4.4073216.18635HepG2HNRNPK
chr2101478030101478118+intron-Distal3.107315.18725HepG2HNRNPU
chr2101458434101458450+intron-Distal5.50345400.00000HepG2HNRNPL
chr2101437099101437153+intron-Distal3.247016.67844HepG2SFPQ
chr2101554837101554904+intron-Distal3.6588310.95399HepG2CSTF2T
chr2101493157101493204+intron-Distal3.636056.09756HepG2SLTM
chr2101448798101448838+intron-Distal3.365805.36578HepG2HNRNPK
chr2101517315101517402+intron-Distal5.281426.76922HepG2PTBP1
chr2101458571101458609+intron-Distal3.068994.75190HepG2CDC40
chr2101551326101551382+intron-Distal3.270003.32039HepG2PPIG
chr2101437170101437228+intron-Distal3.035495.89777HepG2FUS
chr2101458219101458224+intron-Distal4.6554430.45136HepG2HNRNPL
chr2101495920101496008+intron-Distal4.4841019.34396HepG2PCBP2
chr2101466644101466650+intron-Distal5.4048530.18542HepG2QKI
chr2101582326101582381+intron-Distal,intron-Proximal5.2406510.42975HepG2PRPF8
chr2101604744101604825+intron-Distal,intron-Proximal3.264893.33087HepG2RBM22
chr2101436970101437041+intron-Distal,intron-Proximal3.8796913.31521HepG2XRN2
chr2101449322101449373+intron-Distal3.064726.13708HepG2SUGP2
chr2101483688101483751+intron-Distal5.4706311.50362HepG2HNRNPM
chr2101455515101455559+intron-Distal3.468547.60928HepG2PCBP2
chr2101493458101493503+intron-Distal4.256556.70827HepG2SLTM
chr2101458208101458219+intron-Distal5.3771971.96609HepG2HNRNPL
chr2101437075101437130+intron-Distal4.220685.62025HepG2HNRNPUL1
chr2101555005101555082+intron-Distal4.887997.19722HepG2HNRNPK
chr2101467649101467729+intron-Distal3.986214.25221HepG2LSM11
chr2101601574101601729+intron-Distal3.328939.50194HepG2PCBP2
chr2101476389101476440+intron-Distal3.665693.35377HepG2QKI
chr2101437039101437099+intron-Distal5.5996411.60422HepG2PRPF4
chr2101601605101601826+intron-Distal4.7892420.60402HepG2HNRNPK
chr2101514006101514120+intron-Distal4.024356.74053HepG2HNRNPK
chr2101494769101494827+intron-Distal3.533813.99926HepG2SRSF9
chr2101437056101437155+intron-Distal3.9292012.86713HepG2FKBP4
chr2101554849101554904+intron-Distal3.224483.70770HepG2DDX59
chr2101448721101448798+intron-Distal3.9211611.44829HepG2HNRNPK
chr2101604760101604792+intron-Distal,intron-Proximal4.469283.86479HepG2PRPF8
chr2101458463101458470+intron-Distal6.00087400.00000HepG2HNRNPL
chr2101458135101458152+intron-Distal5.5433580.78968HepG2HNRNPL
chr2101601775101601831+intron-Distal4.311143.41738HepG2PTBP1
chr2101458254101458264+intron-Distal5.5199450.95593HepG2HNRNPL
chr2101476646101476682+intron-Distal3.967224.94813HepG2HNRNPM
chr2101598998101599088+intron-Distal,intron-Proximal4.1964412.08888HepG2HNRNPK
chr2101606651101606697+intron-Distal,intron-Proximal4.682494.62947HepG2AQR
chr2101517312101517359+intron-Distal4.960444.17937HepG2PCBP2
chr2101449232101449280+intron-Distal3.6838910.51999HepG2HNRNPM
chr2101436962101437091+intron-Distal,intron-Proximal3.7453939.73372HepG2FAM120A
chr2101446964101446999+intron-Distal4.025975.81617HepG2QKI
chr2101437169101437249+intron-Distal3.9757146.44019HepG2CSTF2T
chr2101447787101447875+intron-Distal4.411174.66791HepG2CSTF2
chr2101458267101458314+intron-Distal3.5084231.16197HepG2AGGF1
chr2101470279101470342+intron-Distal3.321177.56529HepG2HNRNPU
chr2101437447101437477+intron-Distal3.0916813.29716HepG2CSTF2T
chr2101594603101594659+intron-Distal3.595515.58194HepG2HNRNPK
chr2101536147101536274+intron-Distal4.500905.14122HepG2PCBP2
chr2101494006101494039+intron-Distal3.991897.20578HepG2SLTM
chr2101495905101496008+intron-Distal3.732586.48384HepG2PTBP1
chr2101476682101476731+intron-Distal4.301126.98528HepG2HNRNPM
chr2101437168101437232+intron-Distal3.2528012.00512HepG2NKRF
chr2101471797101471862+intron-Distal3.785394.29698HepG2SFPQ
chr2101436966101437016+intron-Distal,intron-Proximal4.255417.48578HepG2GTF2F1
chr2101436959101437026+intron-Distal,intron-Proximal3.7047410.12837HepG2FKBP4
chr2101436968101437023+intron-Distal,intron-Proximal3.133659.06106HepG2FASTKD2
chr2101437358101437436+intron-Distal4.3051337.08354HepG2CSTF2T
chr2101458472101458482+intron-Distal5.89863400.00000HepG2HNRNPL
chr2101458488101458499+intron-Distal6.84799135.74167HepG2HNRNPL
chr2101437107101437150+intron-Distal3.474143.77385HepG2NCBP2
chr2101458398101458422+intron-Distal5.3843463.52047HepG2HNRNPL
chr2101458482101458488+intron-Distal5.81339400.00000HepG2HNRNPL
chr2101485407101485473+intron-Distal3.636776.03230HepG2HNRNPC
chr2101437169101437270+intron-Distal4.5659510.71240HepG2DGCR8
chr2101476596101476646+intron-Distal4.0311910.18626HepG2HNRNPM
chr2101437285101437379+intron-Distal3.467914.11623HepG2SRSF9
chr2101458454101458556+intron-Distal3.0024913.84622HepG2CDC40
chr2101458422101458434+intron-Distal5.3331973.52648HepG2HNRNPL
chr2101471529101471610+intron-Distal3.560917.03826HepG2SFPQ
chr2101458318101458331+intron-Distal5.3143764.50148HepG2HNRNPL
chr2101458314101458353+intron-Distal3.6591128.93964HepG2AGGF1
chr2101448947101449002+intron-Distal3.8096612.27697HepG2HNRNPM
chr2101458152101458164+intron-Distal5.78639400.00000HepG2HNRNPL
chr2101478694101478746+intron-Distal5.0986015.51089HepG2HNRNPM
chr2101473345101473452+intron-Distal3.439073.04642HepG2HNRNPA1
chr2101437171101437230+intron-Distal4.029947.47076HepG2PRPF4
chr2101487807101487817+intron-Distal3.522617.98285HepG2HNRNPC
chr2101476753101476799+intron-Distal4.488645.95943HepG2HNRNPM
chr2101466687101466723+intron-Distal4.8134820.22582HepG2QKI
chr2101494579101494706+intron-Distal4.3756311.16142HepG2SLTM
chr2101605075101605134+intron-Distal3.143285.12480HepG2HNRNPK
chr2101458643101458668+intron-Distal4.6404313.82839HepG2AGGF1
chr2101493254101493291+intron-Distal5.149056.38758HepG2SLTM
chr2101437224101437273+intron-Distal3.033907.69506HepG2SFPQ
chr2101513255101513366+intron-Distal4.179669.70979HepG2PCBP2
chr2101513933101513998+intron-Distal3.909535.59440HepG2HNRNPK
chr2101599998101600053+intron-Distal4.102764.07750HepG2HNRNPK
chr2101458435101458514+intron-Distal4.7179017.02819HepG2GTF2F1
chr2101520062101520119+intron-Distal3.078953.54763HepG2TAF15
chr2101582620101582667+intron-Distal5.630536.79597HepG2XPO5
chr2101445145101445197+intron-Distal3.397456.01218HepG2HNRNPM
chr2101495005101495056+intron-Distal3.299425.60151HepG2HLTF
chr2101489888101489947+intron-Distal3.834515.82272HepG2HNRNPL
chr2101458353101458384+intron-Distal4.3708918.06576HepG2AGGF1
chr2101458168101458194+intron-Distal3.0143522.23696HepG2AGGF1
chr2101437377101437430+intron-Distal3.378448.43954HepG2SFPQ
chr2101464632101464643+intron-Distal3.311363.40470HepG2HNRNPM
chr2101607334101607381+intron-Distal,intron-Proximal3.220535.56310HepG2PRPF8
chr2101458107101458151+intron-Distal3.1643013.04373HepG2AGGF1
chr2101521249101521361+intron-Distal,intron-Proximal4.243034.75655HepG2PRPF8
chr2101458331101458352+intron-Distal5.0316156.26233HepG2HNRNPL
chr2101494056101494109+intron-Distal4.532826.20747HepG2SLTM
chr2101458418101458500+intron-Distal3.6965136.13647HepG2AGGF1
chr2101477175101477248+intron-Distal4.3677321.60109HepG2HNRNPM
chr2101455446101455515+intron-Distal4.5747225.49949HepG2PCBP2
chr2101484947101484995+intron-Distal4.567375.72853HepG2HNRNPM
chr2101476657101476708+intron-Distal3.465754.33009HepG2SUGP2
chr2101452686101452737+intron-Distal3.674247.41200HepG2HNRNPL
chr2101458257101458419+intron-Distal3.8179041.20146HepG2XPO5
chr2101458240101458267+intron-Distal3.6225620.20144HepG2AGGF1
chr2101437161101437226+intron-Distal3.344204.35138HepG2SRSF9
chr2101449011101449070+intron-Distal4.6116311.31861HepG2HNRNPM
chr2101458456101458463+intron-Distal5.60680400.00000HepG2HNRNPL
chr2101458450101458454+intron-Distal5.52360400.00000HepG2HNRNPL
chr2101458286101458297+intron-Distal5.87220400.00000HepG2HNRNPL
chr2101554827101554927+intron-Distal4.922055.78422HepG2ILF3
chr2101482187101482312+intron-Distal4.4322914.71401HepG2SRSF9
chr2101437174101437230+intron-Distal3.339036.26232HepG2GTF2F1
chr2101470671101470776+intron-Distal3.054927.79263HepG2RBFOX2
chr2101446911101446964+intron-Distal6.1422414.55065HepG2QKI
chr2101494827101494893+intron-Distal3.297305.16464HepG2SRSF9
chr2101494777101494823+intron-Distal4.051097.25829HepG2SLTM
chr2101466949101467029+intron-Distal3.728143.16983HepG2FUS
chr2101554839101554906+intron-Distal5.705149.01334HepG2PCBP2
chr2101449953101449995+intron-Distal3.482534.60009HepG2SUGP2
chr2101512138101512203+intron-Distal3.087864.68303HepG2HNRNPK
chr2101605331101605500+intron-Distal3.8154912.77326HepG2HNRNPK
chr2101555200101555280+intron-Distal4.158063.00349HepG2ILF3
chr2101485912101485964+intron-Distal5.6171111.79855HepG2XRCC6
chr2101437281101437358+intron-Distal3.8432536.72858HepG2CSTF2T
chr2101458195101458200+intron-Distal5.86847400.00000HepG2HNRNPL
chr2101555014101555076+intron-Distal3.717134.69054HepG2CSTF2T
chr2101437091101437161+intron-Distal3.2158721.83896HepG2FAM120A
chr2101602017101602106+intron-Distal3.394586.72632HepG2HNRNPL
chr2101495817101495927+intron-Distal4.153609.93837HepG2QKI
chr2101493231101493287+intron-Distal4.088903.33119HepG2SRSF9
chr2101536057101536147+intron-Distal3.163324.03740HepG2PCBP2
chr2101458224101458254+intron-Distal4.9494948.43477HepG2HNRNPL
chr2101437036101437084+intron-Distal3.4913332.70239HepG2CSTF2T
chr2101458226101458240+intron-Distal4.1854317.20765HepG2AGGF1
chr2101437048101437098+intron-Distal3.173594.89779HepG2PTBP1
chr2101458568101458582+intron-Distal5.2969760.96851HepG2HNRNPL
chr2101458505101458566+intron-Distal4.2949327.40438HepG2AGGF1
chr2101437101101437168+intron-Distal3.1136814.84542HepG2NKRF
chr2101436960101437036+intron-Distal,intron-Proximal4.4263660.77640HepG2CSTF2T
chr2101458194101458226+intron-Distal3.0801125.63823HepG2AGGF1
chr2101437281101437331+intron-Distal3.873685.61426HepG2FKBP4
chr2101437016101437103+intron-Distal3.1904110.20491HepG2GTF2F1
chr2101462070101462133+intron-Distal3.127164.25236HepG2HNRNPM
chr2101458454101458456+intron-Distal5.57180400.00000HepG2HNRNPL
chr2101458305101458318+intron-Distal5.2599775.49321HepG2HNRNPL
chr2101447799101447847+intron-Distal3.077873.73766HepG2SFPQ
chr2101555027101555106+intron-Distal4.904697.59655HepG2DDX59
chr2101493986101494057+intron-Distal3.5429513.29749HepG2HLTF
chr2101458226101458266+intron-Distal4.1005512.88468HepG2CDC40
chr2101458566101458598+intron-Distal4.5830328.49635HepG2AGGF1
chr2101493471101493532+intron-Distal3.910833.33119HepG2SRSF9
chr2101458102101458135+intron-Distal5.1448570.04824HepG2HNRNPL
chr2101605229101605331+intron-Distal4.0774810.56975HepG2HNRNPK
chr2101437098101437164+intron-Distal3.110163.88827HepG2SLTM
chr2101437098101437162+intron-Distal3.082055.65404HepG2FUS
chr2101494711101494777+intron-Distal5.2837815.78647HepG2SLTM
chr2101437100101437155+intron-Distal3.180194.74917HepG2PCBP2
chr2101465751101465803+intron-Distal3.346333.22951HepG2HNRNPU
chr2101601747101601831+intron-Distal3.532978.84115HepG2PCBP2
chr2101458558101458621+intron-Distal3.7846212.08786HepG2GTF2F1
chr2101437089101437148+intron-Distal3.1545144.95210HepG2CSTF2T
chr2101487276101487371+intron-Distal3.180973.63437HepG2HNRNPM
chr2101458203101458208+intron-Distal5.37298400.00000HepG2HNRNPL
chr2101485295101485385+intron-Distal3.051383.81193HepG2QKI
chr2101458297101458305+intron-Distal5.47878400.00000HepG2HNRNPL
chr2101493099101493161+intron-Distal3.602415.78766HepG2RBM22
chr2101607623101607689+intron-Distal3.912353.06084HepG2HNRNPK
chr2101458113101458153+intron-Distal3.771515.73110HepG2GTF2F1
chr2101436964101437018+intron-Distal,intron-Proximal3.901454.60998HepG2PCBP2
chr2101485180101485225+intron-Distal4.747355.75114HepG2PTBP1
chr2101471269101471313+intron-Distal3.096134.28669HepG2SFPQ
chr2101449064101449118+intron-Distal3.886245.39941HepG2MATR3
chr2101458352101458370+intron-Distal6.2443841.47448HepG2HNRNPL
chr2101458512101458564+intron-Distal4.8655680.47812HepG2HNRNPL
chr2101511565101511643+intron-Distal3.293285.13388HepG2HNRNPL
chr2101479301101479350+intron-Distal3.358863.39857HepG2HNRNPM
chr2101494750101494797+intron-Distal3.594826.87558HepG2HLTF
chr2101437158101437244+intron-Distal3.931626.65702HepG2NCBP2
chr2101458499101458512+intron-Distal5.9067758.74182HepG2HNRNPL
chr2101458264101458384+intron-Distal4.0811021.88985HepG2GTF2F1
chr2101436967101437028+intron-Distal,intron-Proximal3.605653.28035HepG2NCBP2
chr2101458164101458170+intron-Distal5.50620400.00000HepG2HNRNPL
chr2101437108101437151+intron-Distal4.142688.14272HepG2DGCR8
chr2101453274101453322+intron-Distal3.163865.48699HepG2SFPQ
chr2101437364101437418+intron-Distal3.607769.67572HepG2NKRF
chr2101555013101555095+intron-Distal7.2079126.89141HepG2PCBP2
chr2101458170101458183+intron-Distal6.14246400.00000HepG2HNRNPL
chr2101485106101485180+intron-Distal5.0630513.26087HepG2PTBP1
chr2101444897101444970+intron-Distal3.133966.20329HepG2HNRNPM
chr2101492752101492813+intron-Distal4.162734.73695HepG2HNRNPC
chr2101458183101458195+intron-Distal5.89900400.00000HepG2HNRNPL
chr2101458200101458203+intron-Distal5.30838400.00000HepG2HNRNPL
chr2101493089101493157+intron-Distal4.2905116.39613HepG2SLTM
chr2101521796101521856+intron-Distal4.876193.83958HepG2QKI
chr2101437176101437230+intron-Distal3.4786915.35179HepG2FAM120A
chr2101458266101458366+intron-Distal3.1071912.29243HepG2CDC40
chr2101458596101458622+intron-Distal6.3502087.60238HepG2HNRNPL
chr2101458632101458674+intron-Distal4.4118310.53160HepG2XPO5
chr2101542403101542495+intron-Distal3.013153.80334HepG2U2AF2
chr2101458615101458643+intron-Distal4.7385823.70406HepG2AGGF1
chr2101466638101466644+intron-Distal4.113526.78885HepG2QKI
chr2101517359101517449+intron-Distal3.937484.74917HepG2PCBP2
chr2101497057101497138+intron-Distal3.509004.00650HepG2TAF15
chr2101458153101458228+intron-Distal4.2362422.01068HepG2GTF2F1
chr2101521266101521335+intron-Proximal5.330527.65545HepG2RBM22
chr2101436889101436962+intron-Proximal3.191536.58940HepG2FUS
chr2101587381101587442+intron-Proximal4.2847210.64959HepG2SF3A3
chr2101436888101436959+intron-Proximal4.8701844.65101HepG2CSTF2T
chr2101436900101436954+intron-Proximal4.243624.35255HepG2PCBP2
chr2101436908101436958+intron-Proximal3.789715.74918HepG2FKBP4
chr2101594287101594305+intron-Proximal5.4326819.95125HepG2PRPF8
chr2101436896101436962+intron-Proximal4.104396.50525HepG2DGCR8
chr2101436895101436964+intron-Proximal4.6808012.29560HepG2GTF2F1
chr2101587381101587445+intron-Proximal3.904533.05889HepG2SF3B4
chr2101436898101436957+intron-Proximal3.918263.52052HepG2SLTM
chr2101436897101436959+intron-Proximal3.6292417.05293HepG2FAM120A
chr2101436898101436964+intron-Proximal3.464317.39418HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NPAS2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NPAS2 is not available on ENCORE database.

  • 100 RBPs can affect the levels of NPAS2.  








The Knockdown/knockout RNA-Seq assay for NPAS2 is not available on ENCORE database.





100 RBPs can affect the gene expression of NPAS2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NPAS2ENSG00000170485.121407.17740945.512900.573506.678605.08710HepG2AATF
NPAS2ENSG00000170485.121614.988302681.90890-0.731709.922408.30930HepG2ABCF1
NPAS2ENSG00000170485.124762.325601893.866101.3302051.7473049.93650HepG2ACO1
NPAS2ENSG00000170485.121001.056501337.31750-0.417802.839201.83090HepG2ADAR
NPAS2ENSG00000170485.122180.695001902.725400.196602.026301.35670HepG2AKAP8L
NPAS2ENSG00000170485.121451.894001084.345600.421003.174802.33270HepG2ASCC1
NPAS2ENSG00000170485.123576.787302419.550700.563807.978405.73120HepG2ATP5C1
NPAS2ENSG00000170485.122663.140402009.006200.406504.267502.75790HepG2BUD13
NPAS2ENSG00000170485.123913.371202777.625000.494503.781002.62780HepG2CCAR1
NPAS2ENSG00000170485.121180.398701975.45550-0.742905.493504.41150HepG2CNOT7
NPAS2ENSG00000170485.123162.414902508.630500.334003.037302.32140HepG2CPSF6
NPAS2ENSG00000170485.123015.658502208.182000.449505.522903.99850HepG2CPSF7
NPAS2ENSG00000170485.121077.216901371.42080-0.348403.787602.59200HepG2YBX3
NPAS2ENSG00000170485.122662.765001724.059600.6270014.9437013.68370HepG2CELF1
NPAS2ENSG00000170485.122314.665701853.826300.320205.820904.80180HepG2DAZAP1
NPAS2ENSG00000170485.121280.995001751.53350-0.451409.043107.69640HepG2DDX19B
NPAS2ENSG00000170485.121725.873401373.298500.329602.530601.42490HepG2DDX1
NPAS2ENSG00000170485.12746.881301020.73710-0.450704.184803.05090HepG2DDX24
NPAS2ENSG00000170485.12840.621801133.38350-0.431102.735101.45260HepG2DDX27
NPAS2ENSG00000170485.121508.370701172.909800.362803.410501.90490HepG2DDX52
NPAS2ENSG00000170485.122106.897701211.445400.798308.441907.17140HepG2DDX55
NPAS2ENSG00000170485.121818.251602255.74310-0.311102.381601.44110HepG2DDX5
NPAS2ENSG00000170485.123025.055301078.726901.4875030.0144028.30900HepG2DDX6
NPAS2ENSG00000170485.12973.078901811.90470-0.8969025.8196024.27200HepG2DKC1
NPAS2ENSG00000170485.121813.486901334.764700.442109.316408.20270HepG2DNAJC2
NPAS2ENSG00000170485.121405.58100960.471800.549304.056002.70140HepG2AGO1
NPAS2ENSG00000170485.121965.834101036.612700.9232013.4385012.19970HepG2EIF2S1
NPAS2ENSG00000170485.122075.347901135.904000.8694012.4664010.70090HepG2EIF3D
NPAS2ENSG00000170485.122484.917801115.559801.1553014.6254013.11760HepG2EIF4B
NPAS2ENSG00000170485.121495.116102322.93720-0.635708.991007.19530HepG2ESF1
NPAS2ENSG00000170485.121344.538901015.312700.405104.317702.82990HepG2FAM120A
NPAS2ENSG00000170485.121549.25690993.767100.640508.852407.02760HepG2FASTKD2
NPAS2ENSG00000170485.123823.938302707.994700.497704.377903.42620HepG2FIP1L1
NPAS2ENSG00000170485.121524.77720983.620800.632306.688005.49650HepG2FUBP3
NPAS2ENSG00000170485.121871.078301156.225100.694308.158207.01730HepG2FXR1
NPAS2ENSG00000170485.121725.481302843.81800-0.720808.656407.56630HepG2GPKOW
NPAS2ENSG00000170485.122495.594901808.071800.464809.500307.82590HepG2HDGF
NPAS2ENSG00000170485.12871.270501359.48320-0.641907.967206.95490HepG2HNRNPA1
NPAS2ENSG00000170485.122037.689701703.700700.258202.982202.01720HepG2HNRNPA2B1
NPAS2ENSG00000170485.121927.532701512.198200.350003.117902.38730HepG2HNRNPC
NPAS2ENSG00000170485.121675.145001086.473400.624507.287506.19400HepG2HNRNPK
NPAS2ENSG00000170485.121911.472601688.705700.178701.925001.35010HepG2HNRNPL
NPAS2ENSG00000170485.122174.354202713.89980-0.319802.440101.84380HepG2HNRNPLL
NPAS2ENSG00000170485.121166.105701502.19860-0.365405.090004.28760HepG2HNRNPU
NPAS2ENSG00000170485.121868.628502209.97460-0.242002.101101.46380HepG2IGF2BP1
NPAS2ENSG00000170485.121905.927501023.189300.897304.035102.85020HepG2IGF2BP3
NPAS2ENSG00000170485.121762.957901156.631400.608006.069305.10630HepG2MAGOH
NPAS2ENSG00000170485.121880.633501163.011200.693306.154005.24210HepG2MATR3
NPAS2ENSG00000170485.122108.458401190.330400.8247010.442109.25210HepG2NCBP2
NPAS2ENSG00000170485.122296.546301112.671201.045303.167301.99370HepG2NONO
NPAS2ENSG00000170485.121952.343102406.32590-0.301602.372801.67820HepG2NSUN2
NPAS2ENSG00000170485.121515.050501059.716800.515604.410203.51160HepG2PABPC4
NPAS2ENSG00000170485.121944.879901139.399200.7713013.2430012.07130HepG2PCBP1
NPAS2ENSG00000170485.122073.457503040.90130-0.552504.944602.53610HepG2PPIG
NPAS2ENSG00000170485.121500.925701916.58940-0.352705.230504.20190HepG2PRPF4
NPAS2ENSG00000170485.121261.10550934.267600.432702.911602.08330HepG2PRPF8
NPAS2ENSG00000170485.122184.972101159.510600.9140017.7766016.61880HepG2PTBP1
NPAS2ENSG00000170485.122336.972901862.740300.327106.385905.56330HepG2PUM1
NPAS2ENSG00000170485.121625.740101929.01870-0.246803.158202.50930HepG2PUS1
NPAS2ENSG00000170485.123616.909501212.126601.5771019.4416017.73560HepG2RAVER1
NPAS2ENSG00000170485.123661.357002937.824100.317504.018403.00720HepG2RBM15
NPAS2ENSG00000170485.121779.686602294.29230-0.366405.127204.47600HepG2RBM22
NPAS2ENSG00000170485.121841.420201139.553900.6922010.236508.99870HepG2RBM25
NPAS2ENSG00000170485.121488.680202417.63550-0.6996010.921509.71940HepG2RPLP0
NPAS2ENSG00000170485.12854.818901190.95590-0.478402.568301.65560HepG2RPS10
NPAS2ENSG00000170485.121401.920701984.24810-0.501203.406302.51860HepG2RPS3A
NPAS2ENSG00000170485.121353.33610924.158000.550204.144403.20480HepG2RRP9
NPAS2ENSG00000170485.121533.030101337.759900.196502.006601.44390HepG2SAFB2
NPAS2ENSG00000170485.122104.744202686.27650-0.352003.109802.36340HepG2SF3B1
NPAS2ENSG00000170485.122236.673601206.968300.8899019.7059018.36100HepG2SF3B4
NPAS2ENSG00000170485.121999.591701560.029800.358007.001406.05060HepG2SMN1
NPAS2ENSG00000170485.121858.119001236.727300.587204.413603.18680HepG2SMNDC1
NPAS2ENSG00000170485.121290.231802988.93510-1.2120011.7824010.18140HepG2SNRNP70
NPAS2ENSG00000170485.123501.977802591.295300.434409.916109.12720HepG2SRFBP1
NPAS2ENSG00000170485.122209.881701732.552600.351005.441104.60620HepG2SRSF5
NPAS2ENSG00000170485.122038.329201025.084000.9915027.8378026.43320HepG2SRSF9
NPAS2ENSG00000170485.121271.630502249.81680-0.8231026.8479025.62000HepG2SSB
NPAS2ENSG00000170485.121757.141001132.802900.633204.307602.79460HepG2SUB1
NPAS2ENSG00000170485.122440.100901970.402700.308405.307004.49530HepG2SUCLG1
NPAS2ENSG00000170485.121479.655103063.97570-1.050106.861305.26480HepG2TBRG4
NPAS2ENSG00000170485.121137.90290808.224700.493403.264202.18590HepG2TFIP11
NPAS2ENSG00000170485.121614.858801040.534300.634004.986803.87450HepG2TIA1
NPAS2ENSG00000170485.121205.669301459.57480-0.275702.377401.90750HepG2TIAL1
NPAS2ENSG00000170485.122049.535701472.720900.476709.381308.43640HepG2TRIM56
NPAS2ENSG00000170485.123375.491002316.288600.543206.362205.42610HepG2U2AF1
NPAS2ENSG00000170485.123921.943901838.256501.093103.887502.70680HepG2U2AF2
NPAS2ENSG00000170485.122737.738901814.549400.593306.182104.90080HepG2UBE2L3
NPAS2ENSG00000170485.121289.69240712.308900.8564010.516209.04200HepG2UCHL5
NPAS2ENSG00000170485.122313.692102047.090300.176501.925501.32560HepG2UPF1
NPAS2ENSG00000170485.122910.349001976.381600.558208.905907.93110HepG2UTP3
NPAS2ENSG00000170485.121761.602601192.211000.563103.732002.24890HepG2XRCC5
NPAS2ENSG00000170485.12944.248401187.07710-0.330202.356401.68270HepG2XRN2
NPAS2ENSG00000170485.121516.982001891.44910-0.318305.165704.29690HepG2ZC3H8
NPAS2ENSG00000170485.122995.363402251.404100.411807.572406.78350HepG2ZNF622
NPAS2ENSG00000170485.1221.312002.411103.143803.406302.52370K562HSPD1
NPAS2ENSG00000170485.121.0491014.98650-3.836403.163902.29960K562MTPAP
NPAS2ENSG00000170485.123.3234016.65590-2.325302.234901.55740K562NSUN2
NPAS2ENSG00000170485.123.0566016.42830-2.426202.218301.48190K562SF3A3
NPAS2ENSG00000170485.120.0000016.83060-99999.999995.311704.06420K562SRPK2
NPAS2ENSG00000170485.121.6718017.66020-3.401003.515302.71240K562UPF1
NPAS2ENSG00000170485.120.5021015.11190-4.911603.928702.87970K562WDR3
NPAS2ENSG00000170485.120.0000015.71060-99999.999995.151804.02690K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NPAS2 is not available on ENCORE database.





11 RBPs can affect the splicing of NPAS2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENPAS2ENSG00000170485.12chr2+1015850121015851781015847421015848901015874511015875110.180000.000000.00003includedHepG2HNRNPK
SENPAS2ENSG00000170485.12chr2+1015514281015515931015493711015494631015542141015543040.103000.001470.03680includedHepG2HNRNPK
SENPAS2ENSG00000170485.12chr2+101607241101607334101606717101606908101609808101609989-0.109000.000690.04519excludedHepG2FTO
SENPAS2ENSG00000170485.12chr2+101565828101565942101564696101564817101580519101580638-0.110000.000040.00227excludedHepG2SF3A3
A3SSNPAS2ENSG00000170485.12chr2+1016118611016125171016122571016125171016098081016099890.166000.002210.05033longerHepG2U2AF2
A3SSNPAS2ENSG00000170485.12chr2+1016118611016125171016122571016125171016098081016099890.118000.000990.03978longerHepG2U2AF1
RINPAS2ENSG00000170485.12chr2+1015986921016047381015986921015988391016045401016047380.299000.000330.00355includedHepG2U2AF2
RINPAS2ENSG00000170485.12chr2+1015986921016047381015986921015988391016045401016047380.103000.001790.03573includedHepG2KHSRP
RINPAS2ENSG00000170485.12chr2+1015986921016047381015986921015988391016045401016047380.099000.009650.06027includedHepG2SF3B4
RINPAS2ENSG00000170485.12chr2+1015986921016047381015986921015988391016045401016047380.094000.004050.04175includedHepG2HNRNPK
MXENPAS2ENSG00000170485.12chr2+101606717101606908101607241101607334101604540101604738101609808101609989-0.250000.000710.036792includedHepG2BCCIP
MXENPAS2ENSG00000170485.12chr2+101606855101606908101607241101607334101604540101604738101609808101609989-0.235000.000050.005752includedHepG2BCCIP
MXENPAS2ENSG00000170485.12chr2+101549371101549463101554214101554304101541607101541756101564696101564761-0.135000.000910.014712includedHepG2SFPQ
MXENPAS2ENSG00000170485.12chr2+1016072411016073341016098081016099891016067171016069081016118611016132910.198000.001720.088591includedHepG2NOL12
MXENPAS2ENSG00000170485.12chr2+101549371101549463101554214101554304101541607101541756101564696101564761-0.129000.000600.005262includedHepG2U2AF2
MXENPAS2ENSG00000170485.12chr2+101607241101607334101609808101609989101606717101606908101611861101613291-0.264000.006450.037572includedHepG2U2AF2
MXENPAS2ENSG00000170485.12chr2+101607241101607334101609808101609989101606717101606908101611861101612517-0.175000.000090.013432includedHepG2DDX59

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NPAS2 is not avaliable on ENCORE database.