ACSS2

General Information

Gene Name : ACSS2
Gene ID : ENSG00000131069.19
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ACSS2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ACSS2	ENSG00000131069.19	21.47	19.43	20.45	ENCSR000AEF
HepG2	ACSS2	ENSG00000131069.19	49.90	47.79	48.84	ENCSR985KAT
K562	ACSS2	ENSG00000131069.19	46.23	52.22	49.22	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ACSS2 is not avaliable on ENCORE database.

Proteins bound to RNA

ACSS2 RNA is bound by 45 proteins.

CanvasJS.com

eCLIP assay for ACSS2 is not avaliable on ENCORE database.

45 proteins are bound to ACSS2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	33511092	33511168	+	3'-UTR,CDS,intron-Proximal	6.18159	400.00000	K562	AQR
chr20	33480961	33481057	+	intron-Distal	6.95559	135.86920	HepG2	PTBP1
chr20	33510080	33510107	+	intron-Distal	5.84843	81.98318	K562	AQR
chr20	33515456	33515513	+	3'-UTR	5.17375	57.80443	K562	UPF1
chr20	33510107	33510150	+	intron-Distal	4.92880	54.26272	K562	AQR
chr20	33510057	33510080	+	intron-Distal	6.27704	48.15953	K562	AQR
chr20	33515581	33515675	+	3'-UTR	5.07924	37.64874	K562	UPF1
chr20	33509296	33509466	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.57833	34.64254	HepG2	EFTUD2
chr20	33511056	33511181	+	3'-UTR,CDS,intron-Proximal	4.37606	33.80760	HepG2	AQR
chr20	33480964	33481057	+	intron-Distal	4.24833	33.08567	K562	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 169 entries

eCLIP assay for ACSS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ACSS2 is not available on ENCORE database.
179 RBPs can affect the levels of ACSS2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ACSS2 is not available on ENCORE database.

179 RBPs can affect the gene expression of ACSS2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ACSS2	ENSG00000131069.15	12929.74610	2680.19920	2.27020	303.69900	301.00000	HepG2	SSB
ACSS2	ENSG00000131069.15	1839.22520	9422.14850	-2.35700	273.00040	270.06470	HepG2	NELFE
ACSS2	ENSG00000131069.15	2452.21930	9200.39000	-1.90760	215.25110	212.84680	HepG2	SRSF1
ACSS2	ENSG00000131069.15	2307.27980	8775.54940	-1.92730	195.21820	191.95880	HepG2	RECQL
ACSS2	ENSG00000131069.15	9594.28980	3922.76940	1.29020	131.48080	128.27140	HepG2	DAZAP1
ACSS2	ENSG00000131069.15	5933.17810	1301.12320	2.18890	98.24810	95.23180	HepG2	NSUN2
ACSS2	ENSG00000131069.15	10316.73700	1467.27770	2.81370	93.96260	91.24290	HepG2	HNRNPLL
ACSS2	ENSG00000131069.15	3762.43280	8814.41610	-1.22820	85.87420	83.48750	HepG2	SF3B4
ACSS2	ENSG00000131069.15	1808.45900	9781.04620	-2.43520	83.91980	81.67380	HepG2	AKAP1
ACSS2	ENSG00000131069.15	1794.62360	4689.95320	-1.38590	76.05500	73.21590	K562	FXR1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 232 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ACSS2 is not available on ENCORE database.

32 RBPs can affect the splicing of ACSS2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	ACSS2	ENSG00000131069.15	chr20	+	33501898	33501974	33501555	33501628	33502125	33502240	-0.08400	0.00011	excluded	K562	FXR1
A3SS	ACSS2	ENSG00000131069.15	chr20	+	33501536	33501628	33501555	33501628	33501195	33501299	0.07400	0.00001	longer	K562	AQR
A5SS	ACSS2	ENSG00000131069.15	chr20	+	33508334	33508563	33508334	33508512	33508808	33508942	0.05200	0.00033	longer	K562	PUS1
A5SS	ACSS2	ENSG00000131069.15	chr20	+	33513500	33513673	33513500	33513569	33513907	33514084	0.05300	0.00002	longer	K562	AQR
A5SS	ACSS2	ENSG00000131069.15	chr20	+	33508808	33508969	33508808	33508942	33509132	33509276	0.09800	0.00000	longer	HepG2	TAF15
A5SS	ACSS2	ENSG00000131069.15	chr20	+	33508334	33508563	33508334	33508512	33508808	33508969	0.13200	0.00000	longer	HepG2	TAF15
A5SS	ACSS2	ENSG00000131069.15	chr20	+	33508334	33508563	33508334	33508512	33508808	33508969	0.08000	0.00001	longer	HepG2	SRSF9
A5SS	ACSS2	ENSG00000131069.15	chr20	+	33509610	33509795	33509610	33509669	33511125	33511234	0.07400	0.00005	longer	HepG2	SRSF9
A5SS	ACSS2	ENSG00000131069.15	chr20	+	33509132	33509276	33509132	33509265	33509346	33509403	0.19500	0.00004	longer	HepG2	U2AF2
A5SS	ACSS2	ENSG00000131069.15	chr20	+	33508334	33508563	33508334	33508512	33508808	33508969	0.06100	0.00039	longer	HepG2	NCBP2

Showing 1 to 10 of 60 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ACSS2

General Information

Functions

Localization

Domains (AlphaFold: ACSS2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ACSS2 is not avaliable on ENCORE database.

45 proteins are bound to ACSS2 RNA:

eCLIP assay for ACSS2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ACSS2 is not available on ENCORE database.

179 RBPs can affect the gene expression of ACSS2 :

The Knockdown/knockout RNA-Seq assay for ACSS2 is not available on ENCORE database.

32 RBPs can affect the splicing of ACSS2 :

The Knockdown/knockout RNA-Seq assay for ACSS2 is not avaliable on ENCORE database.