C10orf2

General Information

Gene Name       : C10orf2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C10orf2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C10orf2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C10orf2 RNA is bound by 3 proteins.  







eCLIP assay for C10orf2 is not avaliable on ENCORE database.





3 proteins are bound to C10orf2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10102753749102753867+3'-UTR3.112113.44847HepG2PABPN1
chr10102753611102753712+3'-UTR5.570689.47550K562UPF1
chr10102753564102753724+3'-UTR5.5916212.83360HepG2UPF1
chr10102753770102753858+3'-UTR4.376856.74636K562UPF1
chr10102753741102753824+3'-UTR4.815494.78313HepG2UPF1
chr10102748410102748496+CDS,intron-Distal3.583585.57673HepG2SRSF9
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C10orf2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C10orf2 is not available on ENCORE database.

  • 81 RBPs can affect the levels of C10orf2.  








The Knockdown/knockout RNA-Seq assay for C10orf2 is not available on ENCORE database.





81 RBPs can affect the gene expression of C10orf2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C10orf2ENSG00000107815.3577.01990887.64470-0.621408.774707.66530HepG2AUH
C10orf2ENSG00000107815.3204.18720465.53650-1.1890011.021409.38300HepG2BCLAF1
C10orf2ENSG00000107815.3643.82380327.580000.9747011.3009010.19970HepG2BOP1
C10orf2ENSG00000107815.3226.58080339.35810-0.582803.445502.07890HepG2BUD13
C10orf2ENSG00000107815.3382.73040561.58530-0.553203.010001.99110HepG2CCAR1
C10orf2ENSG00000107815.3695.13960460.428600.594207.974406.95750HepG2CKAP4
C10orf2ENSG00000107815.3135.45770300.74110-1.150708.421007.27600HepG2CPSF6
C10orf2ENSG00000107815.3539.35190425.918900.340502.795201.95690HepG2DDX19B
C10orf2ENSG00000107815.3294.35960460.63020-0.646004.439303.60130HepG2DDX21
C10orf2ENSG00000107815.3392.64170617.14230-0.652404.775203.97100HepG2DDX3X
C10orf2ENSG00000107815.3341.26550526.78440-0.626303.779702.89200HepG2DDX55
C10orf2ENSG00000107815.3311.43320530.14940-0.767505.336904.50500HepG2DDX6
C10orf2ENSG00000107815.3243.92740440.59490-0.853009.036907.95260HepG2DKC1
C10orf2ENSG00000107815.3215.67650393.88460-0.868908.498807.32050HepG2DNAJC21
C10orf2ENSG00000107815.3251.98790509.63420-1.016109.164208.12350HepG2EIF2S1
C10orf2ENSG00000107815.3513.21550258.380100.990008.867107.33770HepG2EIF3D
C10orf2ENSG00000107815.3335.03060563.20020-0.749405.513404.61200HepG2EIF4A3
C10orf2ENSG00000107815.3778.03610548.364900.504602.666301.99010HepG2EIF4B
C10orf2ENSG00000107815.3481.31430666.54060-0.469703.098602.23930HepG2EIF4G2
C10orf2ENSG00000107815.31211.256401019.143900.249002.073501.53770HepG2ETF1
C10orf2ENSG00000107815.3617.94420450.018000.457403.457802.52180HepG2EWSR1
C10orf2ENSG00000107815.3770.89800559.635500.462003.121002.17560HepG2G3BP2
C10orf2ENSG00000107815.3299.11490448.64970-0.584903.524602.36700HepG2GNB2L1
C10orf2ENSG00000107815.3238.79670442.30640-0.889307.353106.26540HepG2HNRNPC
C10orf2ENSG00000107815.31065.07530533.794900.9965013.9834012.53490HepG2HNRNPK
C10orf2ENSG00000107815.3179.48220325.35130-0.858205.324904.48180HepG2HNRNPLL
C10orf2ENSG00000107815.3344.85200439.38320-0.349502.261201.70780HepG2HNRNPU
C10orf2ENSG00000107815.3877.74110571.639300.618604.655403.85400HepG2MATR3
C10orf2ENSG00000107815.3209.74290331.78740-0.661602.601901.66550HepG2MTPAP
C10orf2ENSG00000107815.3704.65690552.401300.351103.212202.56760HepG2PCBP1
C10orf2ENSG00000107815.3240.47410391.89720-0.704605.445904.44190HepG2PPIL4
C10orf2ENSG00000107815.3270.48310406.34260-0.587203.274502.40250HepG2PRPF8
C10orf2ENSG00000107815.3885.02720667.570800.406703.395102.74380HepG2PUF60
C10orf2ENSG00000107815.3377.78000469.07050-0.312302.044001.49620HepG2PUS1
C10orf2ENSG00000107815.31322.55700851.813800.6346010.569409.70060HepG2RBM22
C10orf2ENSG00000107815.3406.13900552.47840-0.443902.868402.18400HepG2RBM25
C10orf2ENSG00000107815.3725.45190530.047900.452702.861501.85390HepG2RBM27
C10orf2ENSG00000107815.3351.77200488.83830-0.474702.793401.98930HepG2RPS2
C10orf2ENSG00000107815.3727.96920488.013400.576903.598802.82640HepG2SF3A3
C10orf2ENSG00000107815.3468.18950640.15610-0.451304.301503.45480HepG2SLBP
C10orf2ENSG00000107815.3607.04820962.08900-0.6644011.3906010.56160HepG2SRFBP1
C10orf2ENSG00000107815.3496.73580610.82700-0.298301.837901.43000HepG2SRSF1
C10orf2ENSG00000107815.3415.86940835.31520-1.0062020.4545019.33980HepG2SSB
C10orf2ENSG00000107815.3784.39200531.223000.562203.703602.23700HepG2SSRP1
C10orf2ENSG00000107815.3220.54180308.84920-0.485902.387001.50880HepG2SUPT6H
C10orf2ENSG00000107815.3277.60250524.39730-0.917607.191406.18310HepG2SUPV3L1
C10orf2ENSG00000107815.3234.01910426.99630-0.867608.540507.74960HepG2TIAL1
C10orf2ENSG00000107815.3314.21270205.313700.613803.073701.43000HepG2TROVE2
C10orf2ENSG00000107815.3502.19930391.233300.360101.848701.32420HepG2U2AF1
C10orf2ENSG00000107815.3602.44280444.869200.437303.280602.14980HepG2UTP18
C10orf2ENSG00000107815.3969.86730417.846501.2147030.2806028.61900HepG2UTP3
C10orf2ENSG00000107815.3205.92490505.48650-1.2956021.6012020.04890HepG2ZC3H8
C10orf2ENSG00000107815.3377.65250475.99060-0.333902.170701.66920HepG2ZNF622
C10orf2ENSG00000107815.31976.87130890.950701.1497023.7152022.18440K562AQR
C10orf2ENSG00000107815.3434.98750641.08570-0.559505.974604.54310K562BCLAF1
C10orf2ENSG00000107815.3226.24050334.32520-0.563402.851001.96470K562BOP1
C10orf2ENSG00000107815.3246.86360355.45690-0.526003.189602.34580K562CPSF6
C10orf2ENSG00000107815.31099.41080725.540900.599509.625508.49750K562DDX47
C10orf2ENSG00000107815.3477.76220315.813100.597105.008803.77680K562DKC1
C10orf2ENSG00000107815.3615.78190950.77360-0.626709.062007.87410K562EIF2S2
C10orf2ENSG00000107815.3941.16170628.150000.583203.176702.06210K562EIF3D
C10orf2ENSG00000107815.3649.46510366.518600.8253010.872709.28540K562EIF3G
C10orf2ENSG00000107815.3498.59980324.748800.618504.805303.72290K562EIF4A3
C10orf2ENSG00000107815.31379.508201142.428400.272002.994302.01730K562EIF4G2
C10orf2ENSG00000107815.3440.34240643.30150-0.546903.850002.83940K562FIP1L1
C10orf2ENSG00000107815.3209.91350361.72060-0.785105.382904.18380K562FMR1
C10orf2ENSG00000107815.3196.36150306.61330-0.642903.529302.48790K562FTO
C10orf2ENSG00000107815.3217.49910324.04870-0.575203.289701.81500K562FUS
C10orf2ENSG00000107815.3774.94700337.723901.1982023.1265021.49550K562FXR1
C10orf2ENSG00000107815.3152.68840312.35880-1.032604.253302.63770K562HNRNPA2B1
C10orf2ENSG00000107815.3268.35910441.26280-0.717505.496204.68320K562HNRNPC
C10orf2ENSG00000107815.3510.08910766.59900-0.587705.248604.00340K562HNRNPU
C10orf2ENSG00000107815.3599.20340872.10930-0.541504.578203.56050K562HSPD1
C10orf2ENSG00000107815.3788.42420412.485800.9345013.5237011.53950K562MAGOH
C10orf2ENSG00000107815.3820.526301217.77400-0.569604.447603.01330K562MSI2
C10orf2ENSG00000107815.3127.60100273.33330-1.099004.321303.01180K562PABPN1
C10orf2ENSG00000107815.3470.24790720.52510-0.615604.815303.72120K562PCBP3
C10orf2ENSG00000107815.3741.79360570.866700.377802.332401.64160K562PRPF8
C10orf2ENSG00000107815.3719.20250400.759000.8436011.238609.96030K562PTBP1
C10orf2ENSG00000107815.3552.74010384.256800.524403.899802.89040K562RBM22
C10orf2ENSG00000107815.3577.27500404.374200.513503.617002.34610K562NELFE
C10orf2ENSG00000107815.3355.07030203.313400.804302.919801.88820K562RPS3
C10orf2ENSG00000107815.3403.20150268.269100.587704.474103.37680K562SF3B4
C10orf2ENSG00000107815.3792.15220657.505200.268702.235901.38520K562SRPK2
C10orf2ENSG00000107815.3569.45560392.882200.535404.302103.42510K562SRSF1
C10orf2ENSG00000107815.3503.48510649.56210-0.367502.978901.76180K562SRSF7
C10orf2ENSG00000107815.3527.82480771.87900-0.548304.019602.46310K562STAU1
C10orf2ENSG00000107815.3184.66130343.42330-0.895103.281601.68850K562SUPT6H
C10orf2ENSG00000107815.3858.09070554.342200.630307.474406.11130K562SYNCRIP
C10orf2ENSG00000107815.3562.57020397.612100.500603.411702.62230K562TARDBP
C10orf2ENSG00000107815.3274.38370380.53840-0.471802.280501.43700K562TIAL1
C10orf2ENSG00000107815.3671.56740940.61350-0.486104.079402.53340K562TROVE2
C10orf2ENSG00000107815.3331.31070585.01530-0.820307.399105.65960K562UCHL5
C10orf2ENSG00000107815.3560.33800689.62840-0.299502.363001.69610K562UPF1
C10orf2ENSG00000107815.3341.21960590.09370-0.790208.457006.88550K562WDR3
C10orf2ENSG00000107815.3751.23400420.892500.835703.857801.91460K562XRCC6
C10orf2ENSG00000107815.3805.138701003.78470-0.318102.269501.50060K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C10orf2 is not available on ENCORE database.





2 RBPs can affect the splicing of C10orf2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A5SSC10orf2ENSG00000107815.3chr10+1027501921027504201027501921027503001027506251027508110.356000.000000.00000longerK562AQR
A5SSC10orf2ENSG00000107815.3chr10+1027506251027508111027506251027507671027529461027541580.280000.000070.00190longerK562AQR
A5SSC10orf2ENSG00000107815.3chr10+102750192102750420102750192102750300102750625102750811-0.108000.000080.01223shorterK562FXR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C10orf2 is not avaliable on ENCORE database.