KAT2A

General Information

Gene Name : KAT2A
Gene ID : ENSG00000108773.10
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KAT2A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KAT2A	ENSG00000108773.10	10.82	17.50	14.16	ENCSR000AEF
HepG2	KAT2A	ENSG00000108773.10	73.34	49.38	61.36	ENCSR985KAT
K562	KAT2A	ENSG00000108773.10	39.30	38.40	38.85	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KAT2A is not avaliable on ENCORE database.

Proteins bound to RNA

KAT2A RNA is bound by 29 proteins.

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eCLIP assay for KAT2A is not avaliable on ENCORE database.

29 proteins are bound to KAT2A RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	40271126	40271196	-	5'-UTR,intron-Distal,intron-Proximal	4.20338	47.76879	HepG2	PPIG
chr17	40270367	40270418	-	5'-UTR,CDS,intron-Distal	4.17863	42.59407	HepG2	PPIG
chr17	40271184	40271252	-	5'-UTR,intron-Distal,intron-Proximal	4.53115	41.80465	K562	SF3B4
chr17	40271096	40271129	-	5'-UTR,intron-Distal	4.84264	41.51800	K562	DDX24
chr17	40271076	40271098	-	5'-UTR,intron-Distal	5.14581	38.39598	HepG2	PPIG
chr17	40269741	40269770	-	5'-UTR,CDS,intron-Distal	5.85402	33.00476	HepG2	PPIG
chr17	40271070	40271096	-	5'-UTR,intron-Distal,intron-Proximal	4.58658	31.86857	K562	DDX24
chr17	40271129	40271152	-	5'-UTR,intron-Distal	4.51362	31.62812	K562	DDX24
chr17	40271152	40271202	-	5'-UTR,intron-Distal,intron-Proximal	4.02468	29.96557	K562	DDX24
chr17	40270418	40270421	-	5'-UTR,CDS,intron-Distal	4.70216	27.88975	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 183 entries

eCLIP assay for KAT2A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KAT2A is not available on ENCORE database.
87 RBPs can affect the levels of KAT2A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for KAT2A is not available on ENCORE database.

87 RBPs can affect the gene expression of KAT2A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KAT2A	ENSG00000108773.6	4737.51860	2210.81710	1.09950	25.97740	24.05530	HepG2	HNRNPK
KAT2A	ENSG00000108773.6	3898.05200	2364.42620	0.72120	25.22530	23.62370	K562	AGGF1
KAT2A	ENSG00000108773.6	1662.46390	3040.50390	-0.87100	18.36090	17.00410	HepG2	PUF60
KAT2A	ENSG00000108773.6	1243.58060	2113.78630	-0.76530	15.80020	14.67550	HepG2	SRSF9
KAT2A	ENSG00000108773.6	2850.15210	1940.53690	0.55450	14.26130	12.97390	HepG2	HNRNPU
KAT2A	ENSG00000108773.6	367.91660	954.88200	-1.37590	13.75440	11.92160	K562	G3BP2
KAT2A	ENSG00000108773.6	4327.20790	2440.01800	0.82640	12.07730	10.98990	K562	PUS1
KAT2A	ENSG00000108773.6	1534.62880	2140.50840	-0.48010	11.27630	10.07730	HepG2	ZC3H8
KAT2A	ENSG00000108773.6	2361.98340	1324.72350	0.83420	11.52260	9.99350	HepG2	UCHL5
KAT2A	ENSG00000108773.6	567.31870	955.75900	-0.75250	10.91830	9.31280	K562	U2AF2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 99 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KAT2A is not available on ENCORE database.

25 RBPs can affect the splicing of KAT2A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	KAT2A	ENSG00000108773.6	chr17	-	40271071	40271191	40270302	40270421	40271262	40271454	-0.46200	0.00000	excluded	HepG2	U2AF1
SE	KAT2A	ENSG00000108773.6	chr17	-	40271071	40271191	40270302	40270421	40271262	40271454	0.22600	0.00000	included	HepG2	HNRNPK
SE	KAT2A	ENSG00000108773.6	chr17	-	40271071	40271191	40270302	40270421	40271262	40271454	-0.31300	0.00028	excluded	HepG2	DDX3X
SE	KAT2A	ENSG00000108773.6	chr17	-	40271071	40271191	40270302	40270421	40271262	40271454	0.26500	0.00090	included	HepG2	TIA1
SE	KAT2A	ENSG00000108773.6	chr17	-	40271071	40271191	40270314	40270421	40271262	40271454	-0.23600	0.00081	excluded	K562	APOBEC3C
SE	KAT2A	ENSG00000108773.6	chr17	-	40271071	40271191	40270302	40270421	40271262	40271454	-0.43400	0.00000	excluded	HepG2	MATR3
SE	KAT2A	ENSG00000108773.6	chr17	-	40271071	40271191	40270302	40270421	40271262	40271454	-0.41600	0.00000	excluded	HepG2	SRSF1
SE	KAT2A	ENSG00000108773.6	chr17	-	40271071	40271191	40270302	40270421	40271262	40271454	-0.42700	0.00000	excluded	HepG2	SF3A3
SE	KAT2A	ENSG00000108773.6	chr17	-	40271071	40271191	40270302	40270421	40271262	40271454	-0.44800	0.00000	excluded	HepG2	PCBP1
A3SS	KAT2A	ENSG00000108773.6	chr17	-	40266971	40267200	40266971	40267053	40267740	40267851	0.06700	0.00000	longer	HepG2	SF3A3

Showing 1 to 10 of 60 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KAT2A

General Information

Functions

Localization

Domains (AlphaFold: KAT2A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KAT2A is not avaliable on ENCORE database.

29 proteins are bound to KAT2A RNA:

eCLIP assay for KAT2A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KAT2A is not available on ENCORE database.

87 RBPs can affect the gene expression of KAT2A :

The Knockdown/knockout RNA-Seq assay for KAT2A is not available on ENCORE database.

25 RBPs can affect the splicing of KAT2A :

The Knockdown/knockout RNA-Seq assay for KAT2A is not avaliable on ENCORE database.