PLA2G4B

General Information

Gene Name       : PLA2G4B
Gene ID             : ENSG00000243708.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PLA2G4B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PLA2G4BENSG00000243708.100.271.610.94ENCSR000AEF
HepG2PLA2G4BENSG00000243708.103.863.983.92ENCSR985KAT
K562PLA2G4BENSG00000243708.101.951.871.91ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PLA2G4B is not avaliable on ENCORE database.



Proteins bound to RNA
  • PLA2G4B RNA is bound by 17 proteins.  







eCLIP assay for PLA2G4B is not avaliable on ENCORE database.





17 proteins are bound to PLA2G4B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr154214007342140183+3'-UTR3.640574.02339HepG2PABPN1
chr154213104942131103+5'-UTR,intron-Distal3.115313.15535K562EWSR1
chr154213595542136007+3'-UTR,CDS4.184866.08299HepG2PPIG
chr154213672142136774+3'-UTR,CDS4.202103.77023K562ZNF622
chr154212874242128797+CDS,intron-Proximal4.673335.35117HepG2PRPF8
chr154212778742127841+CDS5.155756.16445HepG2PPIG
chr154213298342133036+5'-UTR,CDS5.395157.95724HepG2PPIG
chr154213589442135992+3'-UTR,CDS4.640575.32409HepG2PABPN1
chr154213371842133771+5'-UTR,CDS,intron-Proximal5.2744411.82907K562DDX24
chr154213344042133531+5'-UTR,CDS,intron-Proximal3.9847213.10320HepG2PRPF8
chr154212780842127957+CDS,intron-Distal,intron-Proximal5.459986.69228HepG2PRPF8
chr154213468142134764+CDS,intron-Distal,intron-Proximal4.7845511.37040K562DDX24
chr154213372342133766+5'-UTR,CDS4.849946.91190HepG2PPIG
chr154213347042133525+5'-UTR,CDS,intron-Proximal4.986074.86944K562AQR
chr154213297842133054+5'-UTR,CDS3.772283.16390K562SRSF1
chr154212737342127422+CDS,intron-Proximal3.327745.58370HepG2PPIG
chr154213680442136861+3'-UTR,CDS,intron-Proximal3.996516.23016HepG2PRPF8
chr154213235342132428+5'-UTR,CDS,intron-Proximal3.741265.86107HepG2PPIG
chr154213468642134765+CDS,intron-Distal,intron-Proximal4.626927.37772HepG2EFTUD2
chr154213475542134784+CDS,intron-Distal4.192755.24452HepG2PPIG
chr154212831042128354+CDS,intron-Proximal4.073683.31283K562PRPF8
chr154213670042136806+3'-UTR,CDS,intron-Proximal3.944416.62324HepG2PABPN1
chr154213595042136002+3'-UTR,CDS5.935418.32974K562DDX24
chr154213994742140010+3'-UTR,CDS,intron-Proximal3.073113.03634HepG2PABPN1
chr154213304142133102+5'-UTR,CDS3.925945.58370HepG2PPIG
chr154213581542135876+3'-UTR,CDS,intron-Proximal4.603816.12902HepG2SF3B4
chr154213282942132860+5'-UTR,CDS,intron-Proximal4.824266.46301HepG2PPIG
chr154213442742134476+5'-UTR,CDS,intron-Proximal3.882006.08299HepG2PPIG
chr154213327142133293+5'-UTR,CDS5.419195.93845K562DDX24
chr154213273142132793+5'-UTR,CDS3.308416.00907HepG2PPIG
chr154213445242134525+5'-UTR,CDS,intron-Proximal3.512369.77953HepG2PRPF8
chr154213229042132367+5'-UTR,CDS,intron-Proximal4.2241312.25909K562SF3B4
chr154213669742136770+3'-UTR,CDS6.015528.93227K562DDX24
chr154213846842138517+3'-UTR,CDS3.152333.02345K562ZNF622
chr154213442342134474+5'-UTR,CDS4.112114.18170HepG2PABPN1
chr154213446642134520+5'-UTR,CDS,intron-Proximal3.752914.95247K562PRPF8
chr154213478342134894+CDS,intron-Distal,intron-Proximal4.6834214.41880K562AQR
chr154213297142132981+5'-UTR,CDS,intron-Proximal4.127123.49905HepG2PPIG
chr154213343242133467+5'-UTR,CDS4.686454.97342HepG2PPIG
chr154213961542139722+3'-UTR,CDS,intron-Distal,intron-Proximal3.895606.71165HepG2PABPN1
chr154213704442137061+3'-UTR,CDS,intron-Proximal4.635664.38106HepG2PPIG
chr154213591742135995+3'-UTR,CDS3.734654.24220K562ZNF622
chr154213676942136808+3'-UTR,CDS,intron-Proximal3.676534.51003HepG2PPIG
chr154213894342138999+3'-UTR,CDS3.955603.05716HepG2PABPN1
chr154213342742133465+5'-UTR,CDS,intron-Proximal4.600485.23082K562DDX24
chr154213298142133078+5'-UTR,CDS5.006815.24929K562ZNF622
chr154213587342135909+3'-UTR,CDS,intron-Proximal4.695875.86613HepG2PPIG
chr154212945242129569+3'-UTR,5'-UTR,intron-Distal3.092434.95235HepG2SRSF9
chr154212952142129604+3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.139614.22598K562CSTF2T
chr154212967842129761+3'-UTR,intron-Distal3.291103.40562HepG2SRSF9
chr154212951242129593+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.016953.31074K562BUD13
chr154212894542129011+CDS,intron-Distal,intron-Proximal3.366163.13705K562BUD13
chr154212950742129573+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.507606.87242K562DDX24
chr154213126042131340+intron-Distal3.654286.40565K562DDX24
chr154212950942129617+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.398053.87268K562SRSF1
chr154212789142127958+intron-Distal,intron-Proximal5.374888.34710K562AQR
chr154212396542124061+intron-Distal3.405183.56085K562LSM11
chr154213164342131726+intron-Distal3.255955.51539K562EWSR1
chr154213128942131395+intron-Distal3.396015.51539K562EWSR1
chr154213190242131957+intron-Distal4.641345.26338K562AKAP8L
chr154213017842130288+intron-Distal,intron-Proximal3.739675.09513HepG2HNRNPK
chr154212941342129502+3'-UTR,5'-UTR,intron-Distal3.935123.24881HepG2SRSF1
chr154213017542130284+intron-Distal,intron-Proximal3.441526.12137K562CSTF2T
chr154212877342128845+intron-Proximal3.676914.95247K562PRPF8
chr154212784342127891+intron-Proximal5.116076.83960K562AQR
chr154213454142134570+intron-Proximal3.133943.23382HepG2PRPF8
chr154212041742120468+intron-Proximal3.770934.04185HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PLA2G4B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PLA2G4B is not available on ENCORE database.

  • 63 RBPs can affect the levels of PLA2G4B.  








The Knockdown/knockout RNA-Seq assay for PLA2G4B is not available on ENCORE database.





63 RBPs can affect the gene expression of PLA2G4B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PLA2G4BENSG00000243708.4251.39430150.017900.744703.442902.39620HepG2ABCF1
PLA2G4BENSG00000243708.4189.8858065.798101.528907.322905.75890HepG2BCCIP
PLA2G4BENSG00000243708.497.2065051.277100.922602.218601.30960HepG2YBX3
PLA2G4BENSG00000243708.489.2275040.632901.134703.392502.21190HepG2CSTF2
PLA2G4BENSG00000243708.430.9777071.03230-1.197202.989501.56350HepG2CSTF2T
PLA2G4BENSG00000243708.4127.2602064.696900.975902.711501.94380HepG2DDX55
PLA2G4BENSG00000243708.4117.3802050.329101.221605.511204.54810HepG2DNAJC21
PLA2G4BENSG00000243708.4159.49070101.515000.651701.844501.34790HepG2EIF2S1
PLA2G4BENSG00000243708.4194.75030112.150800.796102.452301.84910HepG2EIF4A3
PLA2G4BENSG00000243708.4221.98600109.261701.022602.993902.28020HepG2EIF4B
PLA2G4BENSG00000243708.4325.75570197.329400.723102.542001.96200HepG2ETF1
PLA2G4BENSG00000243708.4198.45660105.011000.918202.446601.81890HepG2G3BP1
PLA2G4BENSG00000243708.4177.2384050.811601.802407.051606.09150HepG2HNRNPA1
PLA2G4BENSG00000243708.4181.40700106.464000.768803.010602.28300HepG2HNRNPK
PLA2G4BENSG00000243708.4112.7618056.154201.005702.377801.81280HepG2HNRNPU
PLA2G4BENSG00000243708.4185.21970107.380900.786402.877801.85350HepG2KHSRP
PLA2G4BENSG00000243708.4117.5913039.633701.568906.439804.73730HepG2LARP7
PLA2G4BENSG00000243708.4136.1999041.587301.711408.019206.03870HepG2LIN28B
PLA2G4BENSG00000243708.4181.27360113.918800.670102.255201.68200HepG2MATR3
PLA2G4BENSG00000243708.4204.63160116.588100.811503.494602.78760HepG2NCBP2
PLA2G4BENSG00000243708.4117.3476047.489801.305005.124003.74630HepG2PCBP2
PLA2G4BENSG00000243708.4158.6846099.485000.673502.142501.60880HepG2PUF60
PLA2G4BENSG00000243708.4198.15540115.053800.784203.438702.75220HepG2QKI
PLA2G4BENSG00000243708.4138.7919047.795201.537906.582105.04670HepG2RBM27
PLA2G4BENSG00000243708.4101.1381040.393901.324004.017001.55940HepG2RPL23A
PLA2G4BENSG00000243708.4111.5890044.996301.310204.357502.99500HepG2RPS5
PLA2G4BENSG00000243708.4176.4603050.001801.819208.422207.38820HepG2SAFB2
PLA2G4BENSG00000243708.4147.1462095.345100.625901.915001.31300HepG2SLBP
PLA2G4BENSG00000243708.4118.6702058.300301.025304.011803.26010HepG2SMN1
PLA2G4BENSG00000243708.4129.9662046.619901.479003.822302.68250HepG2SMNDC1
PLA2G4BENSG00000243708.4214.4552098.200401.126806.856605.93170HepG2SRSF5
PLA2G4BENSG00000243708.4253.63150161.675900.649501.873101.42980HepG2SSB
PLA2G4BENSG00000243708.4187.6047076.639001.291402.951601.81190HepG2STIP1
PLA2G4BENSG00000243708.4207.63150111.703700.894204.531203.77120HepG2SUCLG1
PLA2G4BENSG00000243708.4161.4846064.399001.326205.126604.25090HepG2SUPV3L1
PLA2G4BENSG00000243708.4196.13350131.077300.581302.241601.57920HepG2TARDBP
PLA2G4BENSG00000243708.4222.5446054.525902.029004.288503.69430HepG2TIAL1
PLA2G4BENSG00000243708.4145.7182055.054601.404108.709007.79580HepG2TRIM56
PLA2G4BENSG00000243708.4187.1846097.156400.946004.256203.14500HepG2TUFM
PLA2G4BENSG00000243708.4127.3686038.038601.743408.996407.62510HepG2UCHL5
PLA2G4BENSG00000243708.4184.8824058.954701.648803.146302.07310HepG2UPF2
PLA2G4BENSG00000243708.4183.1486078.833401.216002.777201.67770HepG2XPO5
PLA2G4BENSG00000243708.499.8023050.402700.985502.933701.84060HepG2XRCC6
PLA2G4BENSG00000243708.4217.0213063.393901.7753010.642409.23960HepG2XRN2
PLA2G4BENSG00000243708.494.0995045.767401.039803.217201.80910HepG2ZRANB2
PLA2G4BENSG00000243708.4148.1089091.755200.690703.151801.52350K562AKAP1
PLA2G4BENSG00000243708.4191.23040122.338000.644302.854402.05940K562CPSF6
PLA2G4BENSG00000243708.4171.9768092.988500.887002.229401.30290K562DDX3X
PLA2G4BENSG00000243708.4146.1185094.283700.632002.623801.36290K562DDX6
PLA2G4BENSG00000243708.4240.40680117.759201.029504.283703.41700K562EIF2S2
PLA2G4BENSG00000243708.4149.8181084.815600.820703.634202.12610K562EWSR1
PLA2G4BENSG00000243708.4190.75590124.471800.615802.295501.51420K562FMR1
PLA2G4BENSG00000243708.4170.41220105.499200.691702.616201.73050K562FTO
PLA2G4BENSG00000243708.419.9612050.47040-1.338202.400201.74840K562G3BP2
PLA2G4BENSG00000243708.4204.99270116.804500.811403.924902.98450K562GPKOW
PLA2G4BENSG00000243708.4301.67080153.301800.976503.847702.32890K562HNRNPA2B1
PLA2G4BENSG00000243708.4147.84950240.84960-0.704002.699601.65950K562HNRNPL
PLA2G4BENSG00000243708.4142.1884068.049501.063002.883801.83010K562IGF2BP2
PLA2G4BENSG00000243708.4247.33940152.664800.696003.340502.33450K562PSIP1
PLA2G4BENSG00000243708.4175.25580279.18510-0.671802.759201.94430K562PUF60
PLA2G4BENSG00000243708.4321.09670149.442801.103304.009802.32040K562SFPQ
PLA2G4BENSG00000243708.4307.86330168.426800.870102.940401.45580K562SUPT6H
PLA2G4BENSG00000243708.4150.1577068.877301.124305.559204.53810K562TARDBP
PLA2G4BENSG00000243708.4155.0553066.443801.222506.486605.15470K562TIA1
PLA2G4BENSG00000243708.4249.29560155.921200.676903.475002.39310K562TRIM56
PLA2G4BENSG00000243708.4279.93390196.862100.507802.508201.67230K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PLA2G4B is not available on ENCORE database.





1 RBPs can affect the splicing of PLA2G4B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPLA2G4BENSG00000243708.4chr15+421289784212913842128672421287494213235542132428-0.504000.001360.03273excludedHepG2SRSF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PLA2G4B is not avaliable on ENCORE database.