AP000347.2

General Information

Gene Name : AP000347.2
Gene ID : ENSG00000273000.5
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AP000347.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	AP000347.2	ENSG00000273000.5	2.82	2.44	2.63	ENCSR000AEF
HepG2	AP000347.2	ENSG00000273000.5	3.67	2.97	3.32	ENCSR985KAT
K562	AP000347.2	ENSG00000273000.5	1.73	2.30	2.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AP000347.2 is not avaliable on ENCORE database.

Proteins bound to RNA

AP000347.2 RNA is bound by 18 proteins.

eCLIP assay for AP000347.2 is not avaliable on ENCORE database.

18 proteins are bound to AP000347.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	24051316	24051379	-	intron-Distal,intron-Proximal	3.24130	4.61799	HepG2	BCLAF1
chr22	24032468	24032544	-	intron-Distal,intron-Proximal	3.27647	3.39306	HepG2	GRWD1
chr22	24048204	24048264	-	intron-Distal	3.92193	3.54147	K562	HNRNPM
chr22	24059418	24059515	-	intron-Distal,intron-Proximal	4.09186	7.95933	HepG2	NCBP2
chr22	24036295	24036372	-	intron-Distal,intron-Proximal	3.26749	6.92518	HepG2	PPIG
chr22	24025926	24025986	-	intron-Distal,intron-Proximal	3.88155	3.01428	K562	UCHL5
chr22	24047488	24047579	-	intron-Distal,intron-Proximal	4.51548	8.21325	K562	EXOSC5
chr22	24025910	24025916	-	intron-Distal,intron-Proximal	3.39191	4.11623	HepG2	SRSF9
chr22	24046770	24046855	-	intron-Distal	3.75342	5.53207	K562	HNRNPM
chr22	24045768	24045799	-	intron-Distal	4.33850	3.89080	K562	EXOSC5
chr22	24047698	24047729	-	intron-Distal,intron-Proximal	3.62789	5.30095	HepG2	PPIG
chr22	24057201	24057305	-	intron-Distal	4.55966	8.68543	HepG2	PPIG
chr22	24048449	24048500	-	intron-Distal	4.20850	3.59909	K562	EXOSC5
chr22	24046842	24046885	-	intron-Distal	4.93102	7.06230	K562	EXOSC5
chr22	24037640	24037725	-	intron-Distal,intron-Proximal	3.45426	7.07421	HepG2	BUD13
chr22	24037627	24037705	-	intron-Distal,intron-Proximal	3.70117	9.72545	K562	ZNF622
chr22	24037388	24037442	-	intron-Distal	3.36632	4.65365	HepG2	GRWD1
chr22	24025940	24026041	-	intron-Distal	3.34061	4.77403	HepG2	SRSF1
chr22	24051972	24052056	-	intron-Distal,intron-Proximal	4.35190	18.22249	HepG2	PPIG
chr22	24046993	24047042	-	intron-Distal	5.11477	6.41216	K562	EXOSC5
chr22	24032415	24032474	-	intron-Distal,intron-Proximal	3.44771	4.96025	HepG2	SRSF1
chr22	24046593	24046663	-	intron-Distal	3.84574	11.44842	K562	EXOSC5
chr22	24045482	24045536	-	intron-Distal	3.69696	7.56703	K562	EXOSC5
chr22	24002156	24002188	-	intron-Distal,intron-Proximal	4.24564	8.38781	HepG2	PPIG
chr22	24032507	24032586	-	intron-Distal,intron-Proximal	3.94556	4.52312	K562	AQR
chr22	24047419	24047488	-	intron-Distal	3.03454	4.09304	K562	EXOSC5
chr22	24043899	24043943	-	intron-Distal	4.22893	3.07980	HepG2	HNRNPM
chr22	24036383	24036487	-	intron-Distal	3.24158	3.65536	K562	SRSF1
chr22	24019058	24019130	-	intron-Distal	4.96026	4.82195	HepG2	XPO5
chr22	24046784	24046858	-	intron-Distal	4.65792	6.08412	HepG2	HNRNPM
chr22	24045339	24045370	-	intron-Distal	4.74973	6.08869	K562	EXOSC5
chr22	24046459	24046485	-	intron-Distal	3.61821	4.91037	K562	EXOSC5
chr22	24036437	24036559	-	intron-Distal	3.92760	5.36870	HepG2	SRSF9
chr22	24037646	24037706	-	intron-Distal,intron-Proximal	3.11116	3.70975	K562	UCHL5
chr22	24036590	24036686	-	intron-Distal	3.95393	6.62597	HepG2	GRWD1
chr22	24037658	24037710	-	intron-Distal,intron-Proximal	3.65665	15.34816	HepG2	PPIG
chr22	24045939	24045987	-	intron-Distal	5.31926	9.02435	K562	EXOSC5
chr22	24046586	24046667	-	intron-Distal	4.12342	6.25630	K562	HNRNPM
chr22	24051386	24051430	-	intron-Distal,intron-Proximal	4.14744	7.72847	HepG2	PPIG
chr22	24036394	24036449	-	intron-Distal	3.48836	6.82013	HepG2	PPIG
chr22	24057258	24057373	-	intron-Distal,intron-Proximal	3.09840	4.33023	K562	ZNF622
chr22	24044257	24044300	-	intron-Distal	3.10512	3.10855	K562	EXOSC5
chr22	24036389	24036467	-	intron-Distal	3.33400	4.93187	HepG2	SRSF1
chr22	24001959	24002010	-	intron-Distal,intron-Proximal	3.37045	4.97118	HepG2	U2AF2
chr22	24037485	24037600	-	intron-Distal	3.32405	8.98767	HepG2	PPIG
chr22	24047507	24047597	-	intron-Distal,intron-Proximal	3.59452	5.45902	K562	TIA1
chr22	24036250	24036360	-	intron-Distal,intron-Proximal	4.47999	17.64535	HepG2	PRPF8
chr22	24032477	24032548	-	intron-Distal,intron-Proximal	3.52610	9.71090	HepG2	PPIG
chr22	24025916	24025970	-	intron-Distal,intron-Proximal	3.08358	4.24095	HepG2	SRSF9
chr22	24051989	24052034	-	intron-Distal,intron-Proximal	4.37282	3.02457	HepG2	BCLAF1
chr22	24046141	24046180	-	intron-Distal	4.00864	3.07980	HepG2	HNRNPM
chr22	24035849	24035931	-	intron-Distal	4.74867	6.11055	K562	SLTM
chr22	24002163	24002188	-	intron-Distal,intron-Proximal	3.24133	3.64217	HepG2	SRSF9
chr22	24047431	24047480	-	intron-Distal	4.45519	5.02084	HepG2	HNRNPM
chr22	24047614	24047652	-	intron-Distal,intron-Proximal	3.80710	7.71102	K562	ZNF622
chr22	24044187	24044219	-	intron-Distal	4.68384	5.76685	K562	EXOSC5
chr22	24046779	24046804	-	intron-Distal	4.21454	3.89085	K562	EXOSC5
chr22	24051316	24051357	-	intron-Distal,intron-Proximal	4.41270	7.39306	HepG2	PPIG
chr22	24046606	24046670	-	intron-Distal	5.18993	5.16513	HepG2	HNRNPM
chr22	24047614	24047668	-	intron-Distal,intron-Proximal	4.79135	7.83063	HepG2	GRWD1
chr22	24047615	24047654	-	intron-Distal,intron-Proximal	3.91960	10.86690	HepG2	PPIG
chr22	24048745	24048807	-	intron-Distal	4.09730	3.01445	K562	EXOSC5
chr22	24044038	24044112	-	intron-Distal	4.35105	7.61413	K562	EXOSC5
chr22	24056372	24056398	-	intron-Distal,intron-Proximal	3.36615	6.00907	HepG2	PPIG
chr22	24047279	24047318	-	intron-Distal	4.34605	4.48560	K562	EXOSC5
chr22	24025907	24025980	-	intron-Distal,intron-Proximal	3.48655	10.37782	HepG2	PPIG
chr22	24047707	24047728	-	intron-Distal	3.00814	3.55800	HepG2	BCLAF1
chr22	24048452	24048499	-	intron-Distal	4.17741	3.79026	K562	HNRNPM
chr22	24046237	24046287	-	intron-Distal	5.31405	8.69609	K562	EXOSC5
chr22	24044416	24044495	-	intron-Distal	4.99081	6.41216	K562	EXOSC5
chr22	24000996	24001067	-	intron-Distal	3.81667	3.50377	HepG2	TAF15
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for AP000347.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for AP000347.2 is not available on ENCORE database.
66 RBPs can affect the levels of AP000347.2.

The Knockdown/knockout RNA-Seq assay for AP000347.2 is not available on ENCORE database.

66 RBPs can affect the gene expression of AP000347.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AP000347.2	ENSG00000272578.1	368.54900	271.81530	0.43910	2.83510	2.05960	HepG2	AKAP8L
AP000347.2	ENSG00000272578.1	137.07840	75.89980	0.85270	2.97710	2.17500	HepG2	CIRBP
AP000347.2	ENSG00000272578.1	186.41130	270.49160	-0.53710	3.26010	2.54890	HepG2	CKAP4
AP000347.2	ENSG00000272578.1	233.26210	163.86900	0.50930	2.01800	1.42070	HepG2	CPSF6
AP000347.2	ENSG00000272578.1	134.48720	79.45530	0.75920	2.26600	1.70160	HepG2	DDX6
AP000347.2	ENSG00000272578.1	195.22290	76.37600	1.35380	7.74780	6.79130	HepG2	EIF2S1
AP000347.2	ENSG00000272578.1	206.69050	84.40140	1.29200	7.39410	6.34940	HepG2	EIF4A3
AP000347.2	ENSG00000272578.1	273.94230	82.18240	1.73690	11.87260	10.49780	HepG2	EIF4B
AP000347.2	ENSG00000272578.1	148.96110	57.77090	1.36640	6.69130	5.49940	HepG2	FUBP3
AP000347.2	ENSG00000272578.1	202.68670	85.16670	1.25080	7.07460	6.00480	HepG2	FXR1
AP000347.2	ENSG00000272578.1	233.74490	78.99980	1.56490	11.44510	10.13550	HepG2	G3BP1
AP000347.2	ENSG00000272578.1	218.96820	83.87470	1.38430	8.81300	7.20790	HepG2	G3BP2
AP000347.2	ENSG00000272578.1	309.52200	185.76910	0.73640	3.94130	3.18830	HepG2	GPKOW
AP000347.2	ENSG00000272578.1	329.95600	167.94360	0.97420	3.10450	1.92130	HepG2	GRSF1
AP000347.2	ENSG00000272578.1	104.43430	166.81290	-0.67560	2.93180	1.95320	HepG2	HNRNPM
AP000347.2	ENSG00000272578.1	91.63620	163.45070	-0.83490	1.89000	1.37950	HepG2	HNRNPU
AP000347.2	ENSG00000272578.1	198.90710	80.29980	1.30850	6.23080	5.25500	HepG2	IGF2BP2
AP000347.2	ENSG00000272578.1	235.30310	75.36480	1.64250	6.31790	4.86210	HepG2	IGF2BP3
AP000347.2	ENSG00000272578.1	220.05160	80.77110	1.44580	8.46610	6.63010	HepG2	KHSRP
AP000347.2	ENSG00000272578.1	278.86890	85.19650	1.71060	14.38040	12.93480	HepG2	MAGOH
AP000347.2	ENSG00000272578.1	184.98500	85.67180	1.11040	5.04990	4.22060	HepG2	MATR3
AP000347.2	ENSG00000272578.1	274.03680	87.68860	1.64380	12.99800	11.68400	HepG2	NCBP2
AP000347.2	ENSG00000272578.1	245.68570	157.18640	0.64420	2.81600	2.06060	HepG2	NSUN2
AP000347.2	ENSG00000272578.1	193.97280	78.08690	1.31260	7.73920	6.54670	HepG2	PABPC4
AP000347.2	ENSG00000272578.1	139.66820	215.50400	-0.62570	2.36130	1.39880	HepG2	PCBP2
AP000347.2	ENSG00000272578.1	209.33810	109.54960	0.93420	5.92210	5.18290	HepG2	PTBP1
AP000347.2	ENSG00000272578.1	325.19350	242.71580	0.42190	2.28610	1.73640	HepG2	PUM1
AP000347.2	ENSG00000272578.1	215.66060	118.61920	0.86230	4.81950	4.02880	HepG2	QKI
AP000347.2	ENSG00000272578.1	157.92630	107.66420	0.55260	1.98440	1.40610	HepG2	RBM25
AP000347.2	ENSG00000272578.1	252.89760	121.90810	1.05270	3.60260	3.00160	HepG2	NELFE
AP000347.2	ENSG00000272578.1	264.86870	113.55900	1.22170	10.33750	9.26170	HepG2	RECQL
AP000347.2	ENSG00000272578.1	202.00940	130.89540	0.62590	2.57740	1.98260	HepG2	RPS19
AP000347.2	ENSG00000272578.1	225.35160	114.03360	0.98260	6.38400	5.54660	HepG2	SF3B4
AP000347.2	ENSG00000272578.1	175.41800	96.84910	0.85690	2.74010	2.19050	HepG2	SRSF9
AP000347.2	ENSG00000272578.1	439.11980	169.08970	1.37670	9.70480	8.56670	HepG2	SUPV3L1
AP000347.2	ENSG00000272578.1	207.87290	107.01800	0.95770	5.95170	5.18160	HepG2	TAF15
AP000347.2	ENSG00000272578.1	171.07010	98.30900	0.79910	3.96150	2.96850	HepG2	TIA1
AP000347.2	ENSG00000272578.1	275.25720	158.75190	0.79390	2.68620	2.19180	HepG2	TIAL1
AP000347.2	ENSG00000272578.1	190.17950	99.89430	0.92880	5.03160	4.00180	HepG2	UCHL5
AP000347.2	ENSG00000272578.1	80.16890	299.47930	-1.90130	20.86840	19.42430	K562	AGGF1
AP000347.2	ENSG00000272578.1	174.65430	329.10150	-0.91400	6.89250	5.17020	K562	AKAP8
AP000347.2	ENSG00000272578.1	154.59960	311.62650	-1.01130	7.54140	6.41680	K562	AKAP8L
AP000347.2	ENSG00000272578.1	135.15910	326.98000	-1.27450	13.08680	10.93510	K562	ATP5C1
AP000347.2	ENSG00000272578.1	193.97580	351.37160	-0.85710	6.28050	4.05560	K562	DDX19B
AP000347.2	ENSG00000272578.1	153.54190	248.34490	-0.69370	1.89790	1.33950	K562	DDX47
AP000347.2	ENSG00000272578.1	161.58440	335.30310	-1.05320	9.95470	8.08080	K562	DKC1
AP000347.2	ENSG00000272578.1	80.19510	167.26310	-1.06050	5.17310	3.90350	K562	EFTUD2
AP000347.2	ENSG00000272578.1	107.31380	179.03400	-0.73840	3.08030	1.98680	K562	EIF3D
AP000347.2	ENSG00000272578.1	162.44670	110.40970	0.55700	2.08840	1.54880	K562	FXR1
AP000347.2	ENSG00000272578.1	144.62820	254.70270	-0.81650	4.17930	3.25330	K562	GRSF1
AP000347.2	ENSG00000272578.1	46.05430	107.60300	-1.22430	2.11710	1.58640	K562	HNRNPC
AP000347.2	ENSG00000272578.1	41.48010	154.06020	-1.89300	10.20190	8.16750	K562	HNRNPM
AP000347.2	ENSG00000272578.1	92.46590	191.53260	-1.05060	6.57470	5.18860	K562	HNRNPU
AP000347.2	ENSG00000272578.1	148.89240	253.89440	-0.77000	4.14360	3.17590	K562	HSPD1
AP000347.2	ENSG00000272578.1	104.03260	330.69720	-1.66850	16.15730	13.54390	K562	KIF1C
AP000347.2	ENSG00000272578.1	121.93940	316.57190	-1.37640	10.96410	8.38660	K562	MAK16
AP000347.2	ENSG00000272578.1	144.14310	370.46670	-1.36180	14.36940	12.06550	K562	MBNL1
AP000347.2	ENSG00000272578.1	87.16570	259.67180	-1.57490	10.00500	7.93270	K562	NAA15
AP000347.2	ENSG00000272578.1	57.21880	164.94100	-1.52740	8.75810	6.25520	K562	NONO
AP000347.2	ENSG00000272578.1	68.81760	175.48880	-1.35050	7.77770	4.84360	K562	PA2G4
AP000347.2	ENSG00000272578.1	60.83400	158.50780	-1.38160	5.76640	3.09500	K562	PES1
AP000347.2	ENSG00000272578.1	89.48310	162.86200	-0.86400	3.70350	2.77020	K562	POLR2G
AP000347.2	ENSG00000272578.1	51.93940	162.76770	-1.64790	9.08970	7.72960	K562	PRPF8
AP000347.2	ENSG00000272578.1	105.64180	309.01460	-1.54850	12.03310	10.94770	K562	PUS1
AP000347.2	ENSG00000272578.1	74.80370	301.11580	-2.00910	22.27840	20.52370	K562	RBM15
AP000347.2	ENSG00000272578.1	57.20930	165.75790	-1.53480	8.02880	6.62430	K562	RPS19
AP000347.2	ENSG00000272578.1	58.46010	166.38050	-1.50900	7.25220	5.13580	K562	RRP9
AP000347.2	ENSG00000272578.1	54.70330	168.59920	-1.62390	2.90980	2.18780	K562	SRSF1
AP000347.2	ENSG00000272578.1	107.21790	163.34010	-0.60730	2.32770	1.57460	K562	SYNCRIP
AP000347.2	ENSG00000272578.1	125.10610	313.34230	-1.32460	7.55430	5.14140	K562	UTP18
AP000347.2	ENSG00000272578.1	102.53220	169.85860	-0.72830	3.09370	1.79260	K562	XRN2
AP000347.2	ENSG00000272578.1	208.56060	306.05470	-0.55330	3.08860	2.17320	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for AP000347.2 is not available on ENCORE database.

1 RBPs can affect the splicing of AP000347.2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	AP000347.2	ENSG00000272578.1	chr22	-	24017376	24017457			24000280	24002187	24025911	24026054	-0.34600	0.00009	0.00610	excluded	HepG2	MATR3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AP000347.2

General Information

Functions

Localization

Domains (AlphaFold: AP000347.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AP000347.2 is not avaliable on ENCORE database.

18 proteins are bound to AP000347.2 RNA:

eCLIP assay for AP000347.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AP000347.2 is not available on ENCORE database.

66 RBPs can affect the gene expression of AP000347.2 :

The Knockdown/knockout RNA-Seq assay for AP000347.2 is not available on ENCORE database.

1 RBPs can affect the splicing of AP000347.2 :

The Knockdown/knockout RNA-Seq assay for AP000347.2 is not avaliable on ENCORE database.