RCC1

General Information

Gene Name       : RCC1
Gene ID             : ENSG00000180198.16
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: RCC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RCC1ENSG00000180198.1643.9567.6355.79ENCSR000AEF
HepG2RCC1ENSG00000180198.16102.8587.1194.98ENCSR985KAT
K562RCC1ENSG00000180198.16135.38136.08135.73ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RCC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RCC1 RNA is bound by 45 proteins.  







eCLIP assay for RCC1 is not avaliable on ENCORE database.





45 proteins are bound to RCC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12886526028865400+3'-UTR6.5947638.79948K562UPF1
chr12886516428865221+3'-UTR4.0413812.76523K562YBX3
chr12886511928865164+3'-UTR3.480566.18351K562YBX3
chr12886530528865381+3'-UTR4.1907443.11259K562FAM120A
chr12886488328864981+3'-UTR4.504855.67997HepG2UPF1
chr12886479528864839+3'-UTR4.100163.21228K562TIA1
chr12886450028864559+3'-UTR,CDS4.972515.13703HepG2SUB1
chr12885636928856422+3'-UTR,CDS,intron-Proximal3.2627812.35407K562DDX3X
chr12886490728864964+3'-UTR4.2990818.53709K562FAM120A
chr12886485128864907+3'-UTR3.5294212.19174K562FAM120A
chr12886530828865379+3'-UTR3.721135.56153K562GTF2F1
chr12886496428865022+3'-UTR3.6828811.45317K562FAM120A
chr12886533128865383+3'-UTR4.189923.27240K562APOBEC3C
chr12886544628865469+3'-UTR4.286453.69433K562UPF1
chr12886479628864844+3'-UTR4.8730613.80116K562FAM120A
chr12886530028865375+3'-UTR3.336283.72765HepG2UPF1
chr12886484728864965+3'-UTR3.8258416.21091K562UPF1
chr12886511428865183+3'-UTR3.202027.39448K562FAM120A
chr12886478928864848+3'-UTR3.319303.93290HepG2FAM120A
chr12886532328865380+3'-UTR3.885896.15559K562PABPC4
chr12886476728864883+3'-UTR4.128765.87389HepG2UPF1
chr12883463928834651+5'-UTR,intron-Proximal3.053464.89405HepG2SRSF9
chr12883258728832600+5'-UTR,intron-Proximal5.7195341.41167K562NCBP2
chr12883466128834673+5'-UTR,intron-Proximal3.3560418.51614K562SRSF1
chr12883463828834644+5'-UTR,intron-Proximal4.0317812.40556HepG2PPIG
chr12883255928832665+5'-UTR,intron-Proximal3.1659044.52729HepG2BUD13
chr12884524228845311+5'-UTR,CDS,intron-Distal3.406486.45904HepG2XRN2
chr12883534828835388+5'-UTR3.6612110.45866K562U2AF2
chr12883459728834715+5'-UTR,intron-Proximal3.3705741.80402HepG2BUD13
chr12883463328834704+5'-UTR,intron-Proximal3.4857064.11121K562GPKOW
chr12883255628832604+5'-UTR,intron-Proximal4.9904427.40928HepG2PPIG
chr12883461928834731+5'-UTR,intron-Proximal4.6008545.08037HepG2EFTUD2
chr12884477228844821+5'-UTR,intron-Distal,intron-Proximal4.9848319.82272K562DDX3X
chr12883257428832597+5'-UTR,intron-Proximal3.6386110.15974K562AATF
chr12883256028832658+5'-UTR,intron-Proximal3.7034020.77150HepG2EFTUD2
chr12883255728832565+5'-UTR3.1824810.08627K562HNRNPC
chr12883529828835352+5'-UTR,intron-Proximal4.353593.05889HepG2SF3B4
chr12883464628834661+5'-UTR3.0864616.54696K562SRSF1
chr12883256528832599+5'-UTR,intron-Proximal3.3007412.52969K562HNRNPC
chr12883255828832606+5'-UTR,intron-Proximal5.1885226.97094HepG2PRPF8
chr12883461828834670+5'-UTR,intron-Proximal4.8296223.67786HepG2AQR
chr12883255828832658+5'-UTR,intron-Proximal3.3998845.45463K562GPKOW
chr12883467028834677+5'-UTR,intron-Proximal4.1772572.99939K562AQR
chr12883533028835351+5'-UTR,intron-Proximal3.0117611.71652K562SF3B4
chr12883532928835377+5'-UTR,intron-Proximal6.1219923.59223HepG2AQR
chr12883259428832601+5'-UTR,intron-Proximal5.5739118.53394HepG2AQR
chr12884521728845300+5'-UTR,CDS,intron-Distal3.316005.75313HepG2NKRF
chr12883463128834661+5'-UTR,intron-Proximal5.0516515.77157HepG2PRPF8
chr12883255828832602+5'-UTR,intron-Proximal4.0363540.70434K562EFTUD2
chr12883255928832594+5'-UTR3.804705.30069HepG2AQR
chr12883467028834724+5'-UTR,intron-Proximal6.4025632.43104HepG2AQR
chr12883533328835348+5'-UTR,intron-Proximal3.037668.62986K562U2AF2
chr12883255728832587+5'-UTR5.6663638.62921K562NCBP2
chr12883462328834692+5'-UTR,intron-Proximal4.88072400.00000K562EFTUD2
chr12883466128834725+5'-UTR,intron-Proximal5.9780127.85381HepG2PRPF8
chr12883463828834646+5'-UTR,intron-Proximal3.7600314.83018HepG2NCBP2
chr12883255528832599+5'-UTR,intron-Proximal3.693487.18559HepG2SRSF9
chr12883255628832605+5'-UTR,intron-Proximal5.16405400.00000HepG2NCBP2
chr12883466528834670+5'-UTR3.0506828.35719K562AQR
chr12883259528832598+5'-UTR,intron-Proximal4.24539400.00000K562AQR
chr12883533528835373+5'-UTR,intron-Proximal3.239227.40374HepG2PRPF8
chr12883534028835344+5'-UTR,intron-Proximal3.170367.14768K562SRSF1
chr12883462028834665+5'-UTR,intron-Proximal3.6273849.94029K562AQR
chr12883464628834664+5'-UTR3.8499211.69180HepG2NCBP2
chr12885868128858771+CDS,intron-Proximal3.170633.50786HepG2G3BP1
chr12886180928861843+CDS3.220614.30677K562YBX3
chr12886183728861893+CDS,intron-Proximal6.0192017.53859K562LIN28B
chr12885841928858492+CDS3.1836310.56846HepG2PPIG
chr12886232628862401+CDS,intron-Proximal4.845676.88762HepG2SF3A3
chr12886238228862412+CDS,intron-Proximal5.003846.10169K562LIN28B
chr12886247528862537+CDS3.383513.17668K562METAP2
chr12886434128864408+CDS,intron-Proximal3.681635.73933HepG2GRSF1
chr12885885728858890+CDS,intron-Proximal5.163685.68502HepG2PRPF8
chr12886186128861885+CDS3.120625.79072K562YBX3
chr12885871928858849+CDS3.8780311.64759HepG2PPIG
chr12885708328857097+CDS,intron-Distal,intron-Proximal3.620223.32039HepG2PPIG
chr12886187828861889+CDS3.495613.34848HepG2PPIG
chr12883523228835238+intron-Distal4.60443400.00000HepG2DKC1
chr12883391028833914+intron-Distal4.40757400.00000HepG2DKC1
chr12884058528840630+intron-Distal3.831113.72818HepG2ILF3
chr12883523828835253+intron-Distal,intron-Proximal4.35990400.00000HepG2DKC1
chr12883509328835103+intron-Distal6.33540400.00000HepG2DKC1
chr12883400028834012+intron-Distal3.14531400.00000HepG2NOLC1
chr12884482728844893+intron-Distal,intron-Proximal4.065626.26465HepG2CSTF2T
chr12883519028835198+intron-Distal4.83579400.00000HepG2DKC1
chr12883482828834871+intron-Distal3.6909231.85393K562PRPF8
chr12883272428832736+intron-Distal3.1389615.31758HepG2HNRNPC
chr12883549828835539+intron-Distal,intron-Proximal3.401537.96525K562LIN28B
chr12883406028834067+intron-Distal4.37293400.00000HepG2NOLC1
chr12883506228835074+intron-Distal3.32217400.00000K562AATF
chr12883401228834019+intron-Distal5.08235400.00000HepG2DKC1
chr12883514628835153+intron-Distal3.87132400.00000HepG2DKC1
chr12883400628834012+intron-Distal4.98712400.00000HepG2DKC1
chr12883404128834043+intron-Distal4.70388400.00000HepG2DKC1
chr12883416328834173+intron-Distal3.9734514.22849K562HNRNPC
chr12883576028835773+intron-Distal3.055778.33068K562HNRNPC
chr12883607628836152+intron-Distal,polyA_site5.7541048.26367K562CPSF6
chr12883511328835139+intron-Distal5.84469400.00000HepG2DKC1
chr12883608228836123+intron-Distal5.9080222.03807K562ZC3H11A
chr12883273628832793+intron-Distal3.4037119.10924HepG2HNRNPC
chr12883510328835113+intron-Distal6.25570400.00000HepG2DKC1
chr12883345628833468+intron-Distal3.659466.18300HepG2HNRNPC
chr12883407428834080+intron-Distal4.85940400.00000HepG2NOLC1
chr12883394428833980+intron-Distal3.0526060.40791HepG2NOLC1
chr12883405728834060+intron-Distal5.72979400.00000HepG2DKC1
chr12883401228834021+intron-Distal3.26319400.00000HepG2NOLC1
chr12883394928833963+intron-Distal5.43380400.00000HepG2DKC1
chr12883412628834163+intron-Distal4.0349414.74187K562HNRNPC
chr12883407028834088+intron-Distal3.5307919.45449K562TBRG4
chr12883607328836134+intron-Distal4.6121428.44038K562KHSRP
chr12883407228834087+intron-Distal3.295906.45520K562ZC3H8
chr12883277128832781+intron-Distal4.426534.96071K562HNRNPC
chr12883404728834057+intron-Distal5.65757400.00000HepG2DKC1
chr12883959328839641+intron-Distal3.041133.58752HepG2ILF3
chr12883475528834794+intron-Distal,intron-Proximal3.2572020.57294K562TIA1
chr12883398028834000+intron-Distal3.33817400.00000HepG2NOLC1
chr12883401928834029+intron-Distal5.00869400.00000HepG2DKC1
chr12883328828833314+intron-Distal3.114995.44839K562HNRNPC
chr12884410928844192+intron-Distal3.974415.84244HepG2HNRNPK
chr12883404728834060+intron-Distal3.73614400.00000HepG2NOLC1
chr12883475028834828+intron-Distal,intron-Proximal4.33525400.00000K562PRPF8
chr12883402228834084+intron-Distal3.1695317.45691K562NIPBL
chr12883404328834047+intron-Distal4.90359400.00000HepG2DKC1
chr12883607928836119+intron-Distal4.2835221.87913K562PUM2
chr12883412628834137+intron-Distal3.6748822.63939HepG2HNRNPC
chr12883398928833993+intron-Distal4.87149400.00000HepG2DKC1
chr12883403328834041+intron-Distal4.63653400.00000HepG2DKC1
chr12883387428833887+intron-Distal4.70322400.00000HepG2DKC1
chr12884098428841026+intron-Distal3.670653.24590HepG2ILF3
chr12883406728834074+intron-Distal4.82089400.00000HepG2NOLC1
chr12883475728834821+intron-Distal,intron-Proximal4.1995313.74000HepG2EFTUD2
chr12883614728836210+intron-Distal3.522719.02495HepG2CSTF2T
chr12883509128835121+intron-Distal3.35075400.00000K562AATF
chr12883556728835591+intron-Distal3.0187219.63203K562YBX3
chr12883413728834164+intron-Distal3.9021228.99684HepG2HNRNPC
chr12883388728833903+intron-Distal4.69017400.00000HepG2DKC1
chr12883506728835093+intron-Distal6.44596400.00000HepG2DKC1
chr12883614228836195+intron-Distal,polyA_site3.339368.63839K562METAP2
chr12883614528836232+intron-Distal,polyA_site5.4659944.55223HepG2CSTF2
chr12883607428836129+intron-Distal5.9161314.02250HepG2KHSRP
chr12883614228836224+intron-Distal,polyA_site4.7113252.85924K562CSTF2T
chr12883406028834077+intron-Distal5.87953400.00000HepG2DKC1
chr12883614128836212+intron-Distal,polyA_site7.6574344.73288K562FMR1
chr12885618628856327+intron-Distal,intron-Proximal4.046346.25598K562KHSRP
chr12883515328835181+intron-Distal4.28731400.00000HepG2DKC1
chr12883475028834814+intron-Distal,intron-Proximal4.15126400.00000K562EFTUD2
chr12883418028834200+intron-Distal3.9662510.18436HepG2HNRNPC
chr12883416428834180+intron-Distal4.1456227.13763HepG2HNRNPC
chr12884145928841534+intron-Distal3.721056.35532HepG2CSTF2
chr12883507428835091+intron-Distal3.32262400.00000K562AATF
chr12883402928834033+intron-Distal4.75384400.00000HepG2DKC1
chr12883372728833800+intron-Distal3.958015.26543HepG2RBFOX2
chr12883399328834006+intron-Distal4.98733400.00000HepG2DKC1
chr12883390328833910+intron-Distal4.46078400.00000HepG2DKC1
chr12883407728834084+intron-Distal6.07764400.00000HepG2DKC1
chr12883408028834085+intron-Distal4.72227400.00000HepG2NOLC1
chr12883529728835329+intron-Proximal3.431934.23709HepG2AQR
chr12883469628834714+intron-Proximal3.219236.53672K562HNRNPC
chr12886254028862580+intron-Proximal5.501078.88118K562AQR
chr12886168528861737+intron-Proximal5.025005.11689HepG2RBM22
chr12886149928861561+intron-Proximal4.451964.69223K562SF3B4
chr12883263928832683+intron-Proximal4.5449926.62930K562EFTUD2
chr12883471628834750+intron-Proximal4.6409186.06192K562EFTUD2
chr12883461628834620+intron-Proximal4.3121119.52847K562AQR
chr12883530128835329+intron-Proximal3.8183613.59932HepG2SF3A3
chr12883263828832662+intron-Proximal4.0834840.82559K562AQR
chr12883526528835276+intron-Proximal3.38311400.00000HepG2NOLC1
chr12883469228834716+intron-Proximal4.99920400.00000K562EFTUD2
chr12883260128832669+intron-Proximal6.9238826.30682HepG2AQR
chr12883260228832639+intron-Proximal4.2511645.12604K562EFTUD2
chr12883467728834689+intron-Proximal5.5617974.58536K562AQR
chr12883470828834713+intron-Proximal5.34713400.00000K562AQR
chr12883469928834755+intron-Proximal4.2040122.13043K562TIA1
chr12883259828832603+intron-Proximal4.60888400.00000K562AQR
chr12883474828834763+intron-Proximal3.4813028.36768K562AQR
chr12883260328832638+intron-Proximal4.80094400.00000K562AQR
chr12885854428858615+intron-Proximal4.159614.51699K562ILF3
chr12883260528832627+intron-Proximal3.6108059.43969K562PRPF8
chr12883471428834740+intron-Proximal3.276866.71754K562HNRNPC
chr12883529428835327+intron-Proximal5.8029231.51849K562SF3B4
chr12883471528834748+intron-Proximal4.8319563.41150K562AQR
chr12886150028861562+intron-Proximal4.091263.74254HepG2SF3B4
chr12883459828834638+intron-Proximal3.4719912.51087HepG2SF3A3
chr12883468928834708+intron-Proximal5.40737400.00000K562AQR
chr12883470028834753+intron-Proximal3.9217829.99727K562RBM22
chr12883260028832615+intron-Proximal5.981239.75171K562NCBP2
chr12883260628832650+intron-Proximal5.8050142.90957HepG2PRPF8
chr12883525628835274+intron-Proximal4.15757400.00000HepG2DKC1
chr12883459528834623+intron-Proximal4.6900027.08404K562EFTUD2
chr12883469328834715+intron-Proximal4.74869400.00000K562PRPF8
chr12883260528832655+intron-Proximal4.2954728.10602HepG2NCBP2
chr12883471528834750+intron-Proximal4.5737079.50903K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RCC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RCC1 is not available on ENCORE database.

  • 163 RBPs can affect the levels of RCC1.  








The Knockdown/knockout RNA-Seq assay for RCC1 is not available on ENCORE database.





163 RBPs can affect the gene expression of RCC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RCC1ENSG00000180198.111678.031201894.82390-0.175301.817201.30560HepG2ACO1
RCC1ENSG00000180198.112646.075301853.398700.513605.659904.30290HepG2ADAR
RCC1ENSG00000180198.111454.504003223.38450-1.1480018.6879017.43490HepG2AKAP1
RCC1ENSG00000180198.111388.494901955.89750-0.494304.120402.85450HepG2AKAP8
RCC1ENSG00000180198.111337.833601903.81010-0.509009.867108.52630HepG2AKAP8L
RCC1ENSG00000180198.111514.331102667.10370-0.8166011.7385010.20710HepG2ASCC1
RCC1ENSG00000180198.111628.585302057.71040-0.337403.090501.60660HepG2ATP5C1
RCC1ENSG00000180198.111152.161903228.65400-1.4866082.3081079.60110HepG2AUH
RCC1ENSG00000180198.11914.408001738.77460-0.9272012.1985010.48920HepG2BCLAF1
RCC1ENSG00000180198.111018.003401708.46590-0.7470012.192509.81210HepG2BUD13
RCC1ENSG00000180198.11822.690401646.91710-1.0013022.0547020.27140HepG2CALR
RCC1ENSG00000180198.112139.056302806.38730-0.391702.482201.56570HepG2CCAR1
RCC1ENSG00000180198.111429.582602533.92450-0.8258012.3154010.80360HepG2CIRBP
RCC1ENSG00000180198.111594.619001894.51290-0.248603.458202.73030HepG2CKAP4
RCC1ENSG00000180198.111164.584802151.19520-0.885307.486306.23730HepG2CNOT7
RCC1ENSG00000180198.111005.409201341.26000-0.415803.461402.69980HepG2CPSF6
RCC1ENSG00000180198.112570.079801877.877200.452605.495103.97430HepG2CPSF7
RCC1ENSG00000180198.111549.337901236.049400.325802.526901.49530HepG2CSTF2
RCC1ENSG00000180198.112196.005802611.46370-0.250002.910602.25450HepG2CELF1
RCC1ENSG00000180198.112502.504902807.89150-0.166102.070901.41610HepG2DAZAP1
RCC1ENSG00000180198.111075.115601903.27190-0.8240019.5752017.05860HepG2DDX1
RCC1ENSG00000180198.11770.348801644.45430-1.0940022.2930020.61790HepG2DDX21
RCC1ENSG00000180198.111399.169001840.89670-0.395802.644801.38340HepG2DDX27
RCC1ENSG00000180198.11401.725503087.80930-2.94230111.76930108.29710HepG2DDX3X
RCC1ENSG00000180198.111581.381902354.91470-0.574507.324305.32470HepG2DDX47
RCC1ENSG00000180198.11979.822301967.46560-1.0057013.7374012.18620HepG2DDX55
RCC1ENSG00000180198.11903.665501523.11280-0.753204.549003.30650HepG2DDX59
RCC1ENSG00000180198.111125.574201828.44130-0.700009.192407.47680HepG2DDX5
RCC1ENSG00000180198.111821.530102652.37240-0.542104.841904.04560HepG2DDX6
RCC1ENSG00000180198.111045.830701800.01480-0.7834012.6201010.73490HepG2DHX30
RCC1ENSG00000180198.111221.358701812.85910-0.5698011.5767010.38950HepG2DKC1
RCC1ENSG00000180198.111453.970801866.25130-0.360104.672203.77880HepG2DNAJC21
RCC1ENSG00000180198.111295.315401760.33350-0.442503.904702.82610HepG2EEF2
RCC1ENSG00000180198.111018.868501467.35180-0.526205.143303.62810HepG2EFTUD2
RCC1ENSG00000180198.111036.151801514.05920-0.547204.142802.77350HepG2AGO1
RCC1ENSG00000180198.111188.548402549.90870-1.1012019.5821018.10590HepG2EIF2S1
RCC1ENSG00000180198.111801.652001068.897200.753103.919601.79410HepG2EIF3H
RCC1ENSG00000180198.111549.214802818.00630-0.8631011.175009.91880HepG2EIF4A3
RCC1ENSG00000180198.114179.040502743.615000.607005.044604.13470HepG2EIF4B
RCC1ENSG00000180198.111978.422702770.22030-0.4857010.209908.79760HepG2EIF4G1
RCC1ENSG00000180198.111929.359702653.68250-0.459904.869103.80750HepG2EIF4G2
RCC1ENSG00000180198.111779.801103706.96500-1.0585049.5500047.59730HepG2ETF1
RCC1ENSG00000180198.11795.611001277.26760-0.6829010.695608.41800HepG2FAM120A
RCC1ENSG00000180198.111051.933401637.62290-0.638606.197004.37780HepG2FKBP4
RCC1ENSG00000180198.11458.660101343.64400-1.5507010.863908.89050HepG2FTO
RCC1ENSG00000180198.111302.004401945.23780-0.579207.776206.49420HepG2FUBP3
RCC1ENSG00000180198.112239.543102843.07640-0.344202.645301.96890HepG2FXR1
RCC1ENSG00000180198.111205.366702637.46170-1.1297019.3030017.62080HepG2G3BP1
RCC1ENSG00000180198.112009.212602799.88420-0.478704.767703.58340HepG2G3BP2
RCC1ENSG00000180198.111011.857701272.23150-0.330402.411801.58080HepG2GEMIN5
RCC1ENSG00000180198.111372.238101837.92840-0.421503.665602.48810HepG2GNB2L1
RCC1ENSG00000180198.11717.873401520.31080-1.0826015.6746014.26810HepG2GPKOW
RCC1ENSG00000180198.111468.056901991.28500-0.439802.516201.45390HepG2GRSF1
RCC1ENSG00000180198.111377.883801809.07550-0.392806.175504.78790HepG2HDGF
RCC1ENSG00000180198.11793.230001884.13130-1.2481028.9722027.28860HepG2HNRNPA1
RCC1ENSG00000180198.111895.016602580.56800-0.445508.425606.95910HepG2HNRNPA2B1
RCC1ENSG00000180198.112796.235002095.771600.415904.553703.67860HepG2HNRNPC
RCC1ENSG00000180198.111245.712401863.32190-0.580904.304702.42080HepG2HNRNPD
RCC1ENSG00000180198.111507.241202243.42610-0.5738012.7897011.40070HepG2HNRNPF
RCC1ENSG00000180198.111556.241502670.45540-0.7790012.4262011.04980HepG2HNRNPK
RCC1ENSG00000180198.11473.414001450.87070-1.6157032.6082030.82370HepG2HNRNPLL
RCC1ENSG00000180198.111280.016601588.67730-0.311702.730901.78620HepG2HNRNPM
RCC1ENSG00000180198.111135.467102081.91380-0.8746028.0342026.27150HepG2HNRNPU
RCC1ENSG00000180198.111444.149902209.13950-0.6133010.304008.99340HepG2IGF2BP1
RCC1ENSG00000180198.111278.587402680.95470-1.0682019.3608017.75680HepG2IGF2BP2
RCC1ENSG00000180198.111108.085302515.82930-1.183006.011104.58800HepG2IGF2BP3
RCC1ENSG00000180198.111742.758202126.60200-0.287205.127504.15600HepG2ILF2
RCC1ENSG00000180198.111043.297202097.08590-1.0072010.775808.09270HepG2ILF3
RCC1ENSG00000180198.111631.410502696.52150-0.725006.920805.25330HepG2KHSRP
RCC1ENSG00000180198.111266.768601626.71810-0.360803.298701.51190HepG2CCAR2
RCC1ENSG00000180198.112108.035102963.53880-0.491403.668002.71270HepG2LARP4
RCC1ENSG00000180198.111359.716501890.54350-0.475505.368203.67530HepG2LIN28B
RCC1ENSG00000180198.111595.171102844.06820-0.8342012.0570010.72180HepG2MAGOH
RCC1ENSG00000180198.111866.612302860.01440-0.615606.232005.31530HepG2MATR3
RCC1ENSG00000180198.11958.734401495.41760-0.641304.098802.82880HepG2METAP2
RCC1ENSG00000180198.11977.586501863.52330-0.9307018.6841016.81860HepG2MSI2
RCC1ENSG00000180198.11915.789801479.94420-0.692504.937903.61840HepG2MTPAP
RCC1ENSG00000180198.111171.699001564.83450-0.417404.133802.65180HepG2NAA15
RCC1ENSG00000180198.11646.830202927.40670-2.1782064.3215061.53330HepG2NCBP2
RCC1ENSG00000180198.111418.747002018.01640-0.508303.413201.81500HepG2NKRF
RCC1ENSG00000180198.112007.588002784.30340-0.471907.643106.39210HepG2NOL12
RCC1ENSG00000180198.11719.530201286.55570-0.8384011.118909.70800HepG2NSUN2
RCC1ENSG00000180198.111138.971001966.03210-0.787605.413804.13880HepG2PABPC1
RCC1ENSG00000180198.111047.382702607.15220-1.3157026.5570024.40500HepG2PABPC4
RCC1ENSG00000180198.111608.690402060.70830-0.357305.386904.25870HepG2PARN
RCC1ENSG00000180198.11936.744501724.61190-0.880507.897506.23860HepG2PCBP2
RCC1ENSG00000180198.111514.738501856.89660-0.293803.275202.47910HepG2PPIL4
RCC1ENSG00000180198.11469.719501906.22720-2.02080105.83110102.78600HepG2PRPF4
RCC1ENSG00000180198.11762.632401517.74990-0.9929014.3818012.74390HepG2PRPF8
RCC1ENSG00000180198.111215.134602771.05590-1.1893052.4004050.67590HepG2PTBP1
RCC1ENSG00000180198.111390.082602657.88140-0.9351020.4064018.98780HepG2PUF60
RCC1ENSG00000180198.113385.303002821.482100.262705.407004.63430HepG2PUM1
RCC1ENSG00000180198.11982.469801930.01580-0.9741035.4781033.74290HepG2PUS1
RCC1ENSG00000180198.11974.892403001.14630-1.6222073.1849070.82690HepG2QKI
RCC1ENSG00000180198.111462.729902092.48480-0.516607.544706.22600HepG2RBM15
RCC1ENSG00000180198.111750.878403098.32880-0.8234023.9555022.73150HepG2RBM22
RCC1ENSG00000180198.11650.165302723.72400-2.0667087.9446084.69200HepG2RBM25
RCC1ENSG00000180198.111297.073501763.47710-0.443203.604602.39310HepG2RCC2
RCC1ENSG00000180198.111910.542903083.92870-0.6908020.5668019.35690HepG2NELFE
RCC1ENSG00000180198.112073.980902872.24330-0.4698010.318209.24390HepG2RECQL
RCC1ENSG00000180198.111214.081802416.64030-0.9931020.1550018.65640HepG2RPLP0
RCC1ENSG00000180198.11865.426701635.23370-0.918008.158306.60950HepG2RPS10
RCC1ENSG00000180198.11698.041101390.48430-0.9942018.9823017.58640HepG2RPS19
RCC1ENSG00000180198.111102.257702002.74890-0.8615014.2189012.50720HepG2RPS2
RCC1ENSG00000180198.11663.134502159.63330-1.7034030.2603027.73840HepG2RPS3A
RCC1ENSG00000180198.111621.932502044.46270-0.334002.905701.80160HepG2RPS5
RCC1ENSG00000180198.11633.292501501.36980-1.2453019.3025017.57660HepG2RRP9
RCC1ENSG00000180198.111559.170801854.02220-0.249903.240702.55400HepG2SAFB2
RCC1ENSG00000180198.11900.668501395.41960-0.631607.156705.66470HepG2SERBP1
RCC1ENSG00000180198.111263.262402013.39330-0.672505.377404.41870HepG2SF3A3
RCC1ENSG00000180198.11870.162401436.01080-0.722709.356508.13390HepG2SF3B1
RCC1ENSG00000180198.111580.820602885.04730-0.8679030.9302029.33450HepG2SF3B4
RCC1ENSG00000180198.111835.189502548.54240-0.4737011.9603010.67700HepG2SLBP
RCC1ENSG00000180198.111616.530002162.07950-0.419509.620408.53620HepG2SMN1
RCC1ENSG00000180198.11590.605601597.83700-1.4359017.6769015.74630HepG2SNRNP70
RCC1ENSG00000180198.112074.420003499.43430-0.7544030.1474028.95300HepG2SRFBP1
RCC1ENSG00000180198.111796.708103011.35650-0.7451025.5796024.45970HepG2SRSF1
RCC1ENSG00000180198.111899.202102624.29900-0.466509.539008.47110HepG2SRSF5
RCC1ENSG00000180198.111485.191702204.07370-0.5695012.7229011.41730HepG2SRSF7
RCC1ENSG00000180198.112999.648002449.891700.292004.835204.14360HepG2SRSF9
RCC1ENSG00000180198.111252.551103038.31290-1.2784067.7788066.10670HepG2SSB
RCC1ENSG00000180198.111306.997801878.47490-0.523303.871602.54680HepG2STIP1
RCC1ENSG00000180198.112627.958702984.52680-0.183602.440901.84900HepG2SUCLG1
RCC1ENSG00000180198.111173.008401554.78100-0.406504.200303.05380HepG2SUPT6H
RCC1ENSG00000180198.11743.687201958.58440-1.3970025.9105024.22950HepG2SUPV3L1
RCC1ENSG00000180198.11482.962601414.44650-1.5503026.0314024.25230HepG2TARDBP
RCC1ENSG00000180198.11705.970701312.77210-0.8949010.900809.18360HepG2TFIP11
RCC1ENSG00000180198.111470.594402487.11450-0.7581015.3995013.46940HepG2TIA1
RCC1ENSG00000180198.11564.760402022.87860-1.8407074.1689072.24590HepG2TIAL1
RCC1ENSG00000180198.111575.197402041.05800-0.373806.182505.40000HepG2TRIM56
RCC1ENSG00000180198.11981.857601969.72640-1.0044017.6855016.04060HepG2U2AF1
RCC1ENSG00000180198.11417.891201415.59930-1.760203.765502.60600HepG2U2AF2
RCC1ENSG00000180198.11756.120401156.99790-0.613705.923004.80160HepG2UCHL5
RCC1ENSG00000180198.111030.555401785.58020-0.793009.560108.39610HepG2UPF1
RCC1ENSG00000180198.111318.063201793.47060-0.444302.717301.72100HepG2UPF2
RCC1ENSG00000180198.111445.351701835.26550-0.344602.565901.55080HepG2UTP18
RCC1ENSG00000180198.112282.219701723.895000.404705.748204.93640HepG2UTP3
RCC1ENSG00000180198.111019.652701934.36150-0.923809.593907.57900HepG2XPO5
RCC1ENSG00000180198.11966.632701636.93390-0.760006.218104.33620HepG2XRCC5
RCC1ENSG00000180198.111355.759401928.01140-0.508004.729603.79010HepG2XRN2
RCC1ENSG00000180198.111011.934101881.21190-0.8945018.6855017.21460HepG2ZC3H8
RCC1ENSG00000180198.11928.317801963.78490-1.0809015.4006014.37090HepG2ZNF622
RCC1ENSG00000180198.112167.512502659.81050-0.295302.609601.97410K562AKAP8L
RCC1ENSG00000180198.112434.512702841.70780-0.223102.278101.33800K562CSTF2
RCC1ENSG00000180198.111645.977002220.98570-0.432305.252003.75810K562DDX3X
RCC1ENSG00000180198.113470.684602862.372100.277903.561902.55120K562DKC1
RCC1ENSG00000180198.112206.385703362.47240-0.607808.251406.59810K562EFTUD2
RCC1ENSG00000180198.113710.263605478.70390-0.5623014.7346013.27210K562EIF2S2
RCC1ENSG00000180198.112365.819801990.691300.249002.508001.75030K562EIF3G
RCC1ENSG00000180198.112830.854602320.340900.286802.371001.60950K562EIF4A3
RCC1ENSG00000180198.111590.619502129.69480-0.421104.449202.38090K562FASTKD2
RCC1ENSG00000180198.111710.537902422.35530-0.502004.824603.69350K562FMR1
RCC1ENSG00000180198.111337.352101760.00390-0.396204.207802.51700K562FUS
RCC1ENSG00000180198.114592.591302413.049900.9284036.0259033.96700K562FXR1
RCC1ENSG00000180198.111257.795001869.73550-0.571904.408903.47210K562G3BP2
RCC1ENSG00000180198.116352.286703447.791400.8815023.3750021.72060K562HNRNPC
RCC1ENSG00000180198.112493.915603079.08190-0.304102.847801.68960K562HNRNPF
RCC1ENSG00000180198.112944.634803730.09270-0.341103.848301.61750K562HNRNPH1
RCC1ENSG00000180198.113275.783502323.087800.495706.872705.51990K562MAGOH
RCC1ENSG00000180198.112942.715002318.185600.344103.323302.30090K562MATR3
RCC1ENSG00000180198.114217.850806935.51040-0.7175012.5010010.25220K562MSI2
RCC1ENSG00000180198.111860.537302317.05570-0.316603.405102.03150K562NCBP2
RCC1ENSG00000180198.112838.978402271.399000.321703.179801.73280K562PCBP1
RCC1ENSG00000180198.111655.512002066.74550-0.320102.547301.61010K562PCBP2
RCC1ENSG00000180198.112446.108904509.02760-0.8823014.3549012.49550K562PCBP3
RCC1ENSG00000180198.112714.047503366.26850-0.310702.949801.47110K562PHF6
RCC1ENSG00000180198.113529.316704757.37810-0.430804.119702.16410K562PKM
RCC1ENSG00000180198.111975.157903458.60740-0.8082019.6253017.60110K562POLR2G
RCC1ENSG00000180198.112715.756203272.07540-0.268901.999401.35570K562PRPF8
RCC1ENSG00000180198.112469.485503091.36180-0.324003.239002.24820K562PSIP1
RCC1ENSG00000180198.112822.280102257.118300.322302.764402.10030K562PTBP1
RCC1ENSG00000180198.112172.932702570.17830-0.242202.569201.99440K562RBM15
RCC1ENSG00000180198.112917.354502163.626800.431103.255702.33790K562RBM22
RCC1ENSG00000180198.111380.209101773.87490-0.362003.476901.96730K562RBM25
RCC1ENSG00000180198.111614.293102796.25070-0.792603.596601.78310K562RBM39
RCC1ENSG00000180198.112121.759902820.73480-0.410805.291503.91350K562RCC2
RCC1ENSG00000180198.112134.028203332.90260-0.643207.029205.71220K562RPS19
RCC1ENSG00000180198.112383.528703505.58490-0.556603.631501.80500K562RPS3A
RCC1ENSG00000180198.111509.165502163.62000-0.519703.622102.45880K562RPS3
RCC1ENSG00000180198.111616.972202161.79250-0.418903.159502.11850K562SF3B1
RCC1ENSG00000180198.111365.290001827.91810-0.421004.164002.10620K562SND1
RCC1ENSG00000180198.112169.841802673.95340-0.301402.563801.58770K562SRFBP1
RCC1ENSG00000180198.111692.614902088.72250-0.303402.705601.67230K562SRSF4
RCC1ENSG00000180198.113102.959203936.76590-0.343404.337802.41200K562SRSF9
RCC1ENSG00000180198.112154.093803167.94300-0.556505.714504.21760K562SUPV3L1
RCC1ENSG00000180198.114594.181203469.032600.405206.063204.83940K562SYNCRIP
RCC1ENSG00000180198.111372.165601949.29460-0.506505.875003.51770K562TBRG4
RCC1ENSG00000180198.112469.183603159.08850-0.355503.512402.42230K562TRIM56
RCC1ENSG00000180198.112283.567303278.13190-0.521605.466902.94090K562TRNAU1AP
RCC1ENSG00000180198.111203.607301812.83060-0.590905.528303.87330K562U2AF1
RCC1ENSG00000180198.111080.230401872.11240-0.7933015.9016013.94230K562U2AF2
RCC1ENSG00000180198.111932.008003352.94420-0.7953012.5985010.38690K562UCHL5
RCC1ENSG00000180198.113199.709903949.82590-0.303803.183702.24910K562WDR3
RCC1ENSG00000180198.113509.247604107.42290-0.227103.679802.71390K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RCC1 is not available on ENCORE database.





21 RBPs can affect the splicing of RCC1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERCC1ENSG00000180198.11chr1+2885703428857127288563692885645128858314288585020.054000.000150.06210includedK562XRN2
SERCC1ENSG00000180198.11chr1+288570342885712728856369288564512885831428858502-0.065000.000350.00850excludedHepG2U2AF1
SERCC1ENSG00000180198.11chr1+288570342885712728856369288564512885831428858502-0.053000.000110.00536excludedK562AKAP8L
SERCC1ENSG00000180198.11chr1+288570342885708528856323288564512885831428858330-0.057000.000230.00353excludedK562AQR
SERCC1ENSG00000180198.11chr1+288570342885712728856369288564512885831428858502-0.051000.000280.06000excludedK562HNRNPA1
SERCC1ENSG00000180198.11chr1+2885703428857127288563692885645128858314288585020.075000.000180.06626includedK562KHSRP
SERCC1ENSG00000180198.11chr1+2884323628843365288353412883541728856369288564510.185000.005250.08436includedK562U2AF1
SERCC1ENSG00000180198.11chr1+2885703428857127288563692885645128858314288585020.062000.000010.00267includedHepG2LARP4
SERCC1ENSG00000180198.11chr1+288570342885708528856351288564512885831428858502-0.189000.000000.00000excludedHepG2SRSF1
SERCC1ENSG00000180198.11chr1+2883273128832839288325012883261228834639288346720.206000.000060.00850includedK562HNRNPUL1
SERCC1ENSG00000180198.11chr1+2885703428857085288563512885645128858314288585020.102000.001090.08787includedHepG2SUPV3L1
SERCC1ENSG00000180198.11chr1+2885703428857085288563692885645128858314288585020.134000.000190.05694includedHepG2NOL12
SERCC1ENSG00000180198.11chr1+288570342885712728856369288564512885831428858502-0.057000.000030.00228excludedK562HNRNPU
SERCC1ENSG00000180198.11chr1+288570342885708528856369288564512885831428858330-0.100000.000210.05511excludedHepG2FUBP3
SERCC1ENSG00000180198.11chr1+2885703428857085288563692885645128858314288585020.101000.000010.00110includedHepG2HNRNPC
SERCC1ENSG00000180198.11chr1+288570342885708528856369288564512885831428858502-0.104000.000430.03244excludedHepG2SRSF9
SERCC1ENSG00000180198.11chr1+2884323628843365288353492883541728856369288564440.107000.007880.09810includedK562HNRNPC
A3SSRCC1ENSG00000180198.11chr1+2885635128856451288563692885645128844768288448200.058000.001560.05399longerK562U2AF2
A5SSRCC1ENSG00000180198.11chr1+2883534128835486288353412883541728856369288564510.164000.000170.03504longerHepG2NCBP2
MXERCC1ENSG00000180198.11chr1+28835341288354172884323628843379288346392883467228856369288564510.188000.000030.002611includedHepG2PTBP1
MXERCC1ENSG00000180198.11chr1+28862382288625382886277328862893288617692886189228863258288634110.138000.000090.005641includedK562XRN2
MXERCC1ENSG00000180198.11chr1+2883530028835417288432362884337928834639288346722885636928856451-0.171000.000000.000022includedK562AQR
MXERCC1ENSG00000180198.11chr1+2883526528835417288432362884337928834639288346722885636928856451-0.171000.000000.000022includedK562AQR
MXERCC1ENSG00000180198.11chr1+2883534128835417288432362884337928834639288346722885636928856451-0.062000.000010.000122includedK562AQR
MXERCC1ENSG00000180198.11chr1+28862382288625382886277328862893288617692886189228863258288634110.142000.000640.042681includedK562LARP7
MXERCC1ENSG00000180198.11chr1+28837619288377032884323628843379288365882883661628856369288564510.240000.001090.008711includedHepG2U2AF2
MXERCC1ENSG00000180198.11chr1+2883534128835417288432362884337928834639288346722885636928856451-0.141000.000190.017602includedHepG2TBRG4
MXERCC1ENSG00000180198.11chr1+28862382288625382886277328862893288617692886189228863258288634110.149000.000170.004791includedK562HNRNPC
MXERCC1ENSG00000180198.11chr1+2883531228835417288432362884337928834639288346722885636928856451-0.108000.001970.032672includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RCC1 is not avaliable on ENCORE database.