MRPS18C

General Information

Gene Name       : MRPS18C
Gene ID             : ENSG00000163319.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: MRPS18C)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MRPS18CENSG00000163319.1085.4556.1270.78ENCSR000AEF
HepG2MRPS18CENSG00000163319.1042.1458.7150.42ENCSR985KAT
K562MRPS18CENSG00000163319.1069.7592.7581.25ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MRPS18C is not avaliable on ENCORE database.



Proteins bound to RNA
  • MRPS18C RNA is bound by 6 proteins.  







eCLIP assay for MRPS18C is not avaliable on ENCORE database.





6 proteins are bound to MRPS18C RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr48438227384382377+3'-UTR,5'-UTR,CDS,intron-Proximal3.073753.24816K562YBX3
chr48438255584382693+3'-UTR,intron-Distal4.580296.36475K562CSTF2T
chr48437720684377265+5'-UTR,CDS5.2847614.17008HepG2SUB1
chr48437720184377310+5'-UTR,CDS3.484314.27595K562NOLC1
chr48437722684377330+5'-UTR,CDS3.200264.86973K562UCHL5
chr48437726584377303+CDS5.718449.21129HepG2SUB1
chr48437732784377346+CDS,intron-Proximal3.379583.94787K562AQR
chr48437734684377419+intron-Proximal4.153074.00320K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MRPS18C is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MRPS18C is not available on ENCORE database.

  • 62 RBPs can affect the levels of MRPS18C.  








The Knockdown/knockout RNA-Seq assay for MRPS18C is not available on ENCORE database.





62 RBPs can affect the gene expression of MRPS18C :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MRPS18CENSG00000163319.6364.13590548.97300-0.592303.928802.99960HepG2ASCC1
MRPS18CENSG00000163319.6517.54860660.89050-0.352703.079802.36140HepG2AUH
MRPS18CENSG00000163319.6245.16600354.92440-0.533802.613201.73740HepG2BCLAF1
MRPS18CENSG00000163319.6444.81060333.092200.417202.422801.69720HepG2CALR
MRPS18CENSG00000163319.6353.47290499.63530-0.499302.441201.53170HepG2CCAR1
MRPS18CENSG00000163319.6186.00320280.16400-0.590902.095401.48750HepG2CPSF6
MRPS18CENSG00000163319.6371.57980545.89520-0.555003.217102.55620HepG2DDX6
MRPS18CENSG00000163319.6180.19050524.86130-1.5424018.3635016.93010HepG2EIF2S1
MRPS18CENSG00000163319.6406.06570564.70820-0.475802.141901.53400HepG2EIF4B
MRPS18CENSG00000163319.6779.23230582.208900.420404.383903.37270HepG2EIF4G1
MRPS18CENSG00000163319.6370.90710557.70300-0.588404.108203.12730HepG2EIF4G2
MRPS18CENSG00000163319.6612.52100758.82060-0.309002.470401.89720HepG2ETF1
MRPS18CENSG00000163319.6358.16010542.87540-0.600003.890003.10750HepG2G3BP1
MRPS18CENSG00000163319.6306.62730409.32970-0.416802.472601.79230HepG2HNRNPF
MRPS18CENSG00000163319.6412.31640549.56850-0.414502.303401.66230HepG2HNRNPK
MRPS18CENSG00000163319.6351.89240551.84260-0.649104.590103.74010HepG2IGF2BP2
MRPS18CENSG00000163319.6366.54370555.01890-0.598603.270002.16750HepG2KHSRP
MRPS18CENSG00000163319.6330.34630536.66460-0.700005.155804.18190HepG2PABPC4
MRPS18CENSG00000163319.6368.87190530.43220-0.524002.871602.25650HepG2PCBP1
MRPS18CENSG00000163319.6325.33440539.79480-0.730504.511203.84980HepG2PTBP1
MRPS18CENSG00000163319.6452.59960592.96470-0.389702.260201.71300HepG2PUM1
MRPS18CENSG00000163319.6423.17410584.48280-0.465902.472201.87600HepG2QKI
MRPS18CENSG00000163319.6590.99790363.000500.703103.404502.62470HepG2RAVER1
MRPS18CENSG00000163319.6372.10380600.68980-0.690903.723503.11390HepG2NELFE
MRPS18CENSG00000163319.6388.16140559.55160-0.527602.814102.19280HepG2RECQL
MRPS18CENSG00000163319.6595.79180440.859200.434403.086802.37180HepG2RPLP0
MRPS18CENSG00000163319.6601.46980356.596800.754105.094004.16010HepG2SF3A3
MRPS18CENSG00000163319.6303.26510477.21430-0.654103.788103.16440HepG2SRSF9
MRPS18CENSG00000163319.6277.57340399.78980-0.526402.418601.78110HepG2SUPV3L1
MRPS18CENSG00000163319.6396.42120527.32150-0.411601.937401.45380HepG2TAF15
MRPS18CENSG00000163319.6206.26510295.47840-0.518602.096501.45300HepG2TARDBP
MRPS18CENSG00000163319.6349.92250484.40690-0.469202.461101.66990HepG2TIA1
MRPS18CENSG00000163319.6471.70170301.181900.647104.121103.36090HepG2U2AF1
MRPS18CENSG00000163319.6404.53940577.69230-0.514002.572501.76530HepG2UBE2L3
MRPS18CENSG00000163319.6361.86950236.170400.615503.720002.84090HepG2UCHL5
MRPS18CENSG00000163319.6441.66500305.324600.532504.016403.31430HepG2UTP3
MRPS18CENSG00000163319.6728.85870534.633800.447003.392502.06840K562AARS
MRPS18CENSG00000163319.6715.03420576.538300.310502.027101.52700K562AGGF1
MRPS18CENSG00000163319.6597.95380820.98220-0.457303.018001.52410K562BUD13
MRPS18CENSG00000163319.6199.98190302.64990-0.597803.444902.24060K562CCAR1
MRPS18CENSG00000163319.6482.64340662.63720-0.457303.505502.62170K562CPSF6
MRPS18CENSG00000163319.61577.96940913.988400.7877019.4713017.89410K562DDX47
MRPS18CENSG00000163319.6785.49240645.545800.283002.140501.38140K562DKC1
MRPS18CENSG00000163319.6381.41710504.87640-0.404603.179701.87210K562EIF2S1
MRPS18CENSG00000163319.6719.83960945.44360-0.393303.783402.96440K562EIF2S2
MRPS18CENSG00000163319.6844.74650555.192000.605403.398702.52290K562EIF3G
MRPS18CENSG00000163319.6379.10830530.78510-0.485503.627902.15020K562EXOSC5
MRPS18CENSG00000163319.6819.57270499.406200.7146010.099809.02760K562FXR1
MRPS18CENSG00000163319.61021.74660696.879500.552004.360403.17480K562HNRNPM
MRPS18CENSG00000163319.6393.98130540.19980-0.455402.111901.30770K562KRR1
MRPS18CENSG00000163319.6600.64630766.32100-0.351403.019202.24350K562NSUN2
MRPS18CENSG00000163319.6848.14530667.762300.344902.299201.41170K562PCBP2
MRPS18CENSG00000163319.6893.57120594.478100.587902.823602.06700K562PRPF8
MRPS18CENSG00000163319.6950.19740729.144900.381903.321602.60100K562PTBP1
MRPS18CENSG00000163319.61034.37990605.769400.771804.261303.24500K562RPS19
MRPS18CENSG00000163319.6338.42740453.69720-0.422902.210701.31510K562SRFBP1
MRPS18CENSG00000163319.6595.25800774.58580-0.379903.762102.68890K562SRPK2
MRPS18CENSG00000163319.6948.68030714.798400.408303.563802.76830K562SRSF1
MRPS18CENSG00000163319.6693.31180519.434900.416503.256002.36560K562SYNCRIP
MRPS18CENSG00000163319.6563.93570697.83290-0.307402.021901.32910K562TIA1
MRPS18CENSG00000163319.6375.84220536.01360-0.512102.575501.66940K562TRIM56
MRPS18CENSG00000163319.6750.83630991.10630-0.400502.906201.47740K562TRIP6
MRPS18CENSG00000163319.6703.33310532.667600.400903.259502.38960K562U2AF2
MRPS18CENSG00000163319.6632.51110812.54070-0.361303.212802.44150K562UPF1
MRPS18CENSG00000163319.6580.83940763.98760-0.395403.140701.33300K562UPF2
MRPS18CENSG00000163319.6969.58120722.940900.423405.381704.24130K562WDR43
MRPS18CENSG00000163319.6805.67650503.968300.676803.275001.51820K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MRPS18C is not available on ENCORE database.





38 RBPs can affect the splicing of MRPS18C :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.118000.000090.00299includedK562SRSF1
SEMRPS18CENSG00000163319.6chr4+843808928438095084378061843781118438212584382185-0.091000.001710.03227excludedK562SRSF1
SEMRPS18CENSG00000163319.6chr4+843808928438095084379477843795828438212584382185-0.060000.000530.01244excludedK562SF3B4
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.099000.002860.08069excludedK562PRPF8
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.285000.000040.00120excludedHepG2U2AF1
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.162000.000730.06481excludedHepG2PRPF8
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.220000.000000.00001excludedK562AKAP8L
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.202000.000000.00072includedHepG2TBRG4
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.502000.000000.00000excludedHepG2U2AF2
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.208000.000000.00078includedHepG2AKAP1
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.159000.000000.00000excludedK562AQR
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.245000.000000.00000includedK562FXR1
SEMRPS18CENSG00000163319.6chr4+843808928438095084378061843781118438212584382185-0.064000.000570.01076excludedK562PUS1
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.200000.000040.00495includedHepG2NCBP2
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.289000.000000.00000includedHepG2PTBP1
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.108000.000000.00044excludedK562LARP4
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.066000.000370.06937includedK562APOBEC3C
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.107000.001630.07306excludedK562EFTUD2
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.204000.000010.00070includedHepG2MATR3
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.375000.000000.00000excludedK562U2AF1
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.298000.000000.00084excludedHepG2DDX6
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.133000.001000.09884includedHepG2PCBP2
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.179000.000010.00039includedHepG2SRSF1
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.289000.000000.00000excludedHepG2SF3A3
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.211000.000030.00498includedHepG2IGF2BP3
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.139000.000000.00001excludedK562HNRNPUL1
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.131000.001640.09545includedHepG2TIAL1
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.134000.000110.01584includedHepG2SUPV3L1
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.242000.000000.00002includedHepG2PCBP1
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.185000.000620.02378excludedK562UTP18
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.364000.000000.00000excludedK562U2AF2
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.168000.000000.00004excludedK562HNRNPU
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.219000.000000.00000excludedK562RBM15
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.192000.000000.00002excludedK562AGGF1
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.076000.002650.08403excludedK562SF3B1
SEMRPS18CENSG00000163319.6chr4+8438085484380950843794988437958284382125843823890.052000.000980.04427includedK562HNRNPK
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.226000.000030.00217excludedHepG2HNRNPC
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.176000.000350.02752includedHepG2SRSF9
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.225000.000030.01280excludedHepG2PRPF4
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.196000.000400.05593includedHepG2KHSRP
SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.142000.000000.00008includedK562PTBP1
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.096000.000010.00633excludedK562NPM1
SEMRPS18CENSG00000163319.6chr4+843794988437958284378061843781118438089284380950-0.176000.000000.00000excludedK562HNRNPC
A3SSMRPS18CENSG00000163319.6chr4+8437947784379582843794988437958284377920843781110.057000.000000.00000longerK562AQR
A3SSMRPS18CENSG00000163319.6chr4+8438211084382185843821258438218584380814843809500.051000.000000.00001longerK562AQR
RIMRPS18CENSG00000163319.6chr4+8438214584382390843821458438218584382273843823900.063000.000010.00020includedHepG2SF3A3
RIMRPS18CENSG00000163319.6chr4+8438214584382388843821458438218584382273843823880.083000.000000.00004includedHepG2RBM22
RIMRPS18CENSG00000163319.6chr4+8438214584382388843821458438218584382273843823880.112000.000000.00000includedK562AQR
MXEMRPS18CENSG00000163319.6chr4+84379498843795828438089284380950843780618437811184382125843821850.089000.002510.060221includedHepG2MATR3
MXEMRPS18CENSG00000163319.6chr4+84379498843795828438089284380950843780618437811184382125843821850.147000.000110.006441includedHepG2PTBP1
MXEMRPS18CENSG00000163319.6chr4+84379498843795828438089284380950843780618437811184382125843821850.092000.002340.045541includedHepG2SRSF1
MXEMRPS18CENSG00000163319.6chr4+8437949884379582843808928438095084378061843781118438212584382185-0.187000.001450.023432includedK562DROSHA
MXEMRPS18CENSG00000163319.6chr4+8437949884379582843808928438095084378061843781118438212584382185-0.077000.000900.018262includedK562U2AF1
MXEMRPS18CENSG00000163319.6chr4+8437949884379582843808928438095084378061843781118438212584382185-0.081000.000650.014602includedK562PUS1
MXEMRPS18CENSG00000163319.6chr4+8437949884379582843808548438095084378061843781118438212584382185-0.094000.000770.016632includedK562PUS1
MXEMRPS18CENSG00000163319.6chr4+84379477843795828438089284380950843780618437811184382125843821850.065000.000160.004291includedK562SRSF1
MXEMRPS18CENSG00000163319.6chr4+84379498843795828438089284380950843780618437811184382125843821850.117000.000640.031241includedK562FXR1
MXEMRPS18CENSG00000163319.6chr4+84379477843795828438079284380950843779208437811184382125843821850.055000.000130.001481includedK562AQR
MXEMRPS18CENSG00000163319.6chr4+84379477843795828438084184380950843779208437811184382125843821850.055000.000130.001481includedK562AQR
MXEMRPS18CENSG00000163319.6chr4+84379477843795828438085484380950843779208437811184382125843821850.053000.000200.002221includedK562AQR
MXEMRPS18CENSG00000163319.6chr4+8437949884379582843808928438095084378061843781118438212584382185-0.090000.000050.001312includedK562U2AF2
MXEMRPS18CENSG00000163319.6chr4+8437949884379582843808928438095084378061843781118438212584382185-0.128000.000000.000232includedHepG2SF3A3
MXEMRPS18CENSG00000163319.6chr4+84380892843809508438211084382185843780618437811184382273843825760.127000.015530.076731includedHepG2U2AF2
MXEMRPS18CENSG00000163319.6chr4+8437949884379582843808928438095084378061843781118438212584382185-0.273000.000000.000002includedHepG2U2AF2
MXEMRPS18CENSG00000163319.6chr4+84379498843795828438089284380950843780618437811184382125843821850.154000.000020.001311includedHepG2PCBP1
MXEMRPS18CENSG00000163319.6chr4+84379498843795828438089284380950843780618437811184382125843821850.148000.000420.030981includedHepG2TBRG4
MXEMRPS18CENSG00000163319.6chr4+8437949884379582843808928438095084378061843781118438212584382185-0.098000.002120.059772includedHepG2HNRNPC
MXEMRPS18CENSG00000163319.6chr4+8437949884379582843808928438095084378061843781118438212584382185-0.121000.000140.004162includedK562HNRNPC
MXEMRPS18CENSG00000163319.6chr4+8437949884379582843808928438095084378061843781118438212584382185-0.123000.000020.001832includedK562HNRNPU
MXEMRPS18CENSG00000163319.6chr4+84379498843795828438089284380950843780618437811184382125843821850.099000.000700.046191includedHepG2AKAP1
MXEMRPS18CENSG00000163319.6chr4+84379498843795828438089284380950843780618437811184382125843821850.132000.000040.002561includedHepG2NCBP2
MXEMRPS18CENSG00000163319.6chr4+8437949884379582843808928438095084378061843781118438212584382185-0.191000.001270.027712includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MRPS18C is not avaliable on ENCORE database.