UBC

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	UBC	ENSG00000150991.14	708.93	662.12	685.52	ENCSR000AEF
HepG2	UBC	ENSG00000150991.14	1056.91	727.11	892.01	ENCSR985KAT
K562	UBC	ENSG00000150991.14	595.82	578.41	587.12	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for UBC is not avaliable on ENCORE database.

Proteins bound to RNA

UBC RNA is bound by 50 proteins.

eCLIP assay for UBC is not avaliable on ENCORE database.

50 proteins are bound to UBC RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	125399142	125399161	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.82537	7.79680	K562	RBM15
chr12	125396201	125396235	-	3'-UTR,intron-Distal	6.75357	76.79713	K562	PABPC4
chr12	125396238	125396322	-	3'-UTR,CDS,intron-Distal	3.17112	22.05638	K562	UCHL5
chr12	125398311	125398321	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.20675	12.27499	K562	RBM15
chr12	125398191	125398321	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.32938	9.57975	K562	SRSF7
chr12	125399072	125399143	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.43251	14.07652	K562	AATF
chr12	125396220	125396257	-	3'-UTR,intron-Distal	5.18347	10.92374	K562	RPS3
chr12	125396243	125396322	-	3'-UTR,CDS,intron-Distal	3.29009	25.40006	K562	ZNF622
chr12	125396241	125396307	-	3'-UTR,CDS,intron-Distal	3.15829	4.27496	K562	PCBP1
chr12	125398308	125398333	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.27213	15.90532	HepG2	AQR
chr12	125399131	125399194	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.66261	42.53945	K562	DDX3X
chr12	125396237	125396324	-	3'-UTR,CDS,intron-Distal	3.61165	5.16808	K562	IGF2BP1
chr12	125399131	125399196	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.91426	6.32326	HepG2	DDX3X
chr12	125399145	125399194	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.16545	12.41886	K562	NOLC1
chr12	125396252	125396315	-	3'-UTR,CDS,intron-Distal	5.21085	11.17444	HepG2	RPS3
chr12	125396237	125396316	-	3'-UTR,CDS,intron-Distal	3.26414	18.24930	K562	SND1
chr12	125399132	125399193	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.64229	15.36423	K562	RPS3
chr12	125396236	125396293	-	3'-UTR,CDS,intron-Distal	3.18716	3.38325	HepG2	IGF2BP1
chr12	125399132	125399180	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.42035	4.40684	K562	SRSF7
chr12	125398317	125398321	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	5.06866	51.83009	HepG2	SUB1
chr12	125398249	125398320	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.36719	15.27824	K562	RPS3
chr12	125396242	125396310	-	3'-UTR,CDS,intron-Distal	3.72040	3.45687	HepG2	IGF2BP3
chr12	125398277	125398346	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.85362	5.43815	HepG2	PRPF8
chr12	125399123	125399142	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.07091	8.22323	K562	RBM15
chr12	125399133	125399152	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.17971	4.63153	HepG2	AQR
chr12	125396251	125396316	-	3'-UTR,CDS,intron-Distal	3.77493	10.14323	K562	METAP2
chr12	125396235	125396309	-	3'-UTR,CDS,intron-Distal	4.90156	80.44164	K562	PABPC4
chr12	125396207	125396318	-	3'-UTR,CDS,intron-Distal	4.26520	7.44884	K562	APOBEC3C
chr12	125399124	125399154	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.66461	19.46768	HepG2	PRPF8
chr12	125396219	125396287	-	3'-UTR,CDS,intron-Distal	3.91901	5.24699	HepG2	RBM15
chr12	125396237	125396318	-	3'-UTR,CDS,intron-Distal	4.74619	27.77710	K562	RBM15
chr12	125399129	125399192	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	5.15846	79.41892	HepG2	SUB1
chr12	125396257	125396314	-	3'-UTR,CDS,intron-Distal	4.15360	23.56138	K562	RPS3
chr12	125398778	125398856	-	5'-UTR,intron-Distal,intron-Proximal	3.86617	10.19970	K562	PRPF8
chr12	125398741	125398863	-	5'-UTR,intron-Distal,intron-Proximal	3.38910	4.25403	HepG2	FUS
chr12	125398981	125399050	-	5'-UTR,intron-Distal,intron-Proximal	3.30294	5.97094	K562	LSM11
chr12	125398619	125398669	-	5'-UTR,intron-Distal,intron-Proximal	3.92110	6.10287	K562	NONO
chr12	125398999	125399121	-	5'-UTR,intron-Distal,intron-Proximal	3.98305	32.40817	HepG2	EFTUD2
chr12	125399094	125399098	-	5'-UTR,intron-Distal,intron-Proximal	6.31699	35.28764	HepG2	AQR
chr12	125398787	125398855	-	5'-UTR,intron-Distal,intron-Proximal	4.64816	13.01646	K562	NONO
chr12	125398460	125398492	-	5'-UTR,intron-Distal	4.00455	7.49772	K562	TIA1
chr12	125399011	125399083	-	5'-UTR,intron-Distal,intron-Proximal	3.08655	16.01287	HepG2	PRPF8
chr12	125398693	125398781	-	5'-UTR,intron-Distal,intron-Proximal	3.05907	6.45362	K562	EWSR1
chr12	125398982	125399034	-	5'-UTR,intron-Distal,intron-Proximal	3.86448	5.32184	HepG2	PRPF4
chr12	125398720	125398777	-	5'-UTR,intron-Distal,intron-Proximal	4.07842	11.53978	HepG2	HNRNPM
chr12	125398793	125398937	-	5'-UTR,intron-Distal,intron-Proximal	3.79227	27.69665	K562	DROSHA
chr12	125398981	125399041	-	5'-UTR,intron-Distal,intron-Proximal	3.33648	3.23253	K562	SMNDC1
chr12	125398858	125398955	-	5'-UTR,intron-Distal,intron-Proximal	3.73206	11.13990	HepG2	PRPF4
chr12	125399056	125399118	-	5'-UTR,intron-Distal,intron-Proximal	3.59669	5.89426	HepG2	NCBP2
chr12	125398992	125399036	-	5'-UTR,intron-Distal,intron-Proximal	3.98815	4.51950	HepG2	FASTKD2
chr12	125399004	125399108	-	5'-UTR,intron-Distal,intron-Proximal	3.54351	4.98044	HepG2	CSTF2
chr12	125398578	125398609	-	5'-UTR,intron-Distal	3.51186	3.68481	HepG2	HNRNPM
chr12	125398731	125398768	-	5'-UTR,intron-Distal,intron-Proximal	3.89563	5.58296	HepG2	EFTUD2
chr12	125398535	125398619	-	5'-UTR,intron-Distal,intron-Proximal	4.22370	9.06112	K562	NONO
chr12	125398783	125398846	-	5'-UTR,intron-Distal,intron-Proximal	4.19928	5.90850	K562	NCBP2
chr12	125399032	125399090	-	5'-UTR,intron-Distal,intron-Proximal	5.02852	34.60310	HepG2	RBM22
chr12	125398725	125398804	-	5'-UTR,intron-Distal,intron-Proximal	3.36024	14.30272	K562	XRCC6
chr12	125398674	125398787	-	5'-UTR,intron-Distal,intron-Proximal	6.56749	18.86481	K562	NONO
chr12	125399089	125399127	-	5'-UTR,intron-Distal,intron-Proximal	3.71619	36.25640	K562	AQR
chr12	125398974	125399021	-	5'-UTR,intron-Distal,intron-Proximal	3.37142	5.37861	K562	GEMIN5
chr12	125398872	125398929	-	5'-UTR,intron-Distal,intron-Proximal	3.49629	6.20002	K562	FASTKD2
chr12	125399105	125399128	-	5'-UTR,intron-Distal,intron-Proximal	5.95483	43.05615	HepG2	AQR
chr12	125398865	125398953	-	5'-UTR,intron-Distal,intron-Proximal	3.05294	5.90125	K562	SLTM
chr12	125398999	125399049	-	5'-UTR,intron-Distal,intron-Proximal	3.68137	10.38502	K562	AQR
chr12	125398870	125398933	-	5'-UTR,intron-Distal,intron-Proximal	3.26070	5.20252	K562	NONO
chr12	125399083	125399106	-	5'-UTR,intron-Distal,intron-Proximal	3.60372	28.81172	HepG2	PRPF8
chr12	125399015	125399044	-	5'-UTR,intron-Distal,intron-Proximal	3.93828	4.96235	K562	XRN2
chr12	125398345	125398373	-	5'-UTR,intron-Distal,intron-Proximal	4.06920	4.69223	K562	SF3B4
chr12	125398955	125399015	-	5'-UTR,intron-Distal,intron-Proximal	3.54258	6.15802	K562	XRN2
chr12	125398728	125398784	-	5'-UTR,intron-Distal,intron-Proximal	3.54735	6.38561	K562	LSM11
chr12	125399053	125399094	-	5'-UTR,intron-Distal,intron-Proximal	5.79527	10.68826	HepG2	AQR
chr12	125398909	125398933	-	5'-UTR,intron-Distal,intron-Proximal	3.56815	4.05919	K562	AGGF1
chr12	125398718	125398790	-	5'-UTR,intron-Distal,intron-Proximal	4.08778	15.27007	K562	DROSHA
chr12	125398478	125398496	-	5'-UTR,intron-Distal	3.36244	4.25264	K562	NONO
chr12	125399090	125399103	-	5'-UTR,intron-Distal,intron-Proximal	5.11595	30.44401	HepG2	RBM22
chr12	125398333	125398352	-	5'-UTR,intron-Distal,intron-Proximal	4.94860	13.85754	HepG2	AQR
chr12	125399049	125399089	-	5'-UTR,intron-Distal,intron-Proximal	4.31768	24.11142	K562	AQR
chr12	125399046	125399098	-	5'-UTR,intron-Distal,intron-Proximal	3.72146	6.75245	K562	NONO
chr12	125398856	125398941	-	5'-UTR,intron-Distal,intron-Proximal	3.17175	10.27931	K562	PRPF8
chr12	125398983	125399020	-	5'-UTR,intron-Distal,intron-Proximal	3.48731	4.23470	K562	AATF
chr12	125399128	125399133	-	5'-UTR,intron-Distal,intron-Proximal	5.04393	29.29880	HepG2	AQR
chr12	125399098	125399105	-	5'-UTR,intron-Distal,intron-Proximal	6.39601	41.15378	HepG2	AQR
chr12	125398519	125398650	-	5'-UTR,intron-Distal,intron-Proximal	3.06030	10.05477	K562	DROSHA
chr12	125399053	125399087	-	5'-UTR,intron-Distal,intron-Proximal	6.11333	12.58447	K562	RBM22
chr12	125398610	125398670	-	5'-UTR,intron-Distal,intron-Proximal	3.82089	5.13070	HepG2	HNRNPM
chr12	125398702	125398761	-	5'-UTR,intron-Distal,intron-Proximal	3.30822	3.45995	K562	IGF2BP2
chr12	125399077	125399107	-	5'-UTR,intron-Distal,intron-Proximal	3.28739	7.46708	K562	RBM15
chr12	125399087	125399099	-	5'-UTR,intron-Distal,intron-Proximal	5.01162	10.32102	K562	RBM22
chr12	125398842	125399048	-	5'-UTR,intron-Distal,intron-Proximal	3.32416	6.24003	HepG2	GTF2F1
chr12	125398952	125399014	-	5'-UTR,intron-Distal,intron-Proximal	4.23834	14.86752	K562	PRPF8
chr12	125398421	125398480	-	5'-UTR,intron-Distal	4.45826	14.11911	HepG2	HNRNPM
chr12	125398972	125399130	-	5'-UTR,intron-Distal,intron-Proximal	3.17066	30.55424	K562	EFTUD2
chr12	125398855	125398963	-	5'-UTR,intron-Distal,intron-Proximal	3.41633	8.91172	K562	EWSR1
chr12	125398171	125398237	-	CDS,intron-Distal	3.18606	15.84509	HepG2	GRWD1
chr12	125397866	125397893	-	CDS,intron-Distal,intron-Proximal	4.29416	39.77080	K562	RPS3
chr12	125396707	125396726	-	CDS,intron-Distal	4.80063	12.81331	HepG2	G3BP1
chr12	125397629	125397687	-	CDS,intron-Distal	3.28528	5.24035	HepG2	RPS3
chr12	125398298	125398309	-	CDS,intron-Distal	4.77592	50.47442	HepG2	SUB1
chr12	125397117	125397167	-	CDS,intron-Distal	4.14598	4.82772	K562	SRSF7
chr12	125397866	125397897	-	CDS,intron-Distal,intron-Proximal	3.29368	16.76113	K562	SND1
chr12	125397865	125397895	-	CDS,intron-Distal,intron-Proximal	3.55640	20.87736	K562	METAP2
chr12	125396346	125396413	-	CDS,intron-Distal	3.19073	32.30725	K562	ZNF622
chr12	125398227	125398247	-	CDS,intron-Distal	3.50017	27.67291	K562	UCHL5
chr12	125398004	125398033	-	CDS,intron-Distal,intron-Proximal	3.09843	6.94451	HepG2	G3BP1
chr12	125397866	125397891	-	CDS,intron-Distal,intron-Proximal	4.00567	11.77523	HepG2	RPS3
chr12	125397800	125397813	-	CDS,intron-Distal,intron-Proximal	4.51992	9.67356	K562	RPS3
chr12	125397110	125397159	-	CDS,intron-Distal	5.05973	16.37694	HepG2	G3BP1
chr12	125398184	125398227	-	CDS,intron-Distal	4.29958	46.23825	K562	UCHL5
chr12	125396349	125396396	-	CDS,intron-Distal	3.80841	5.40651	HepG2	PPIG
chr12	125397790	125397814	-	CDS,intron-Distal,intron-Proximal	3.82069	5.37802	K562	FMR1
chr12	125398037	125398057	-	CDS,intron-Distal,intron-Proximal	4.13060	9.89953	HepG2	YBX3
chr12	125397620	125397696	-	CDS,intron-Distal	4.25991	46.04280	K562	RBM15
chr12	125398040	125398055	-	CDS,intron-Distal,intron-Proximal	3.96355	13.98818	K562	RPS3
chr12	125397792	125397813	-	CDS,intron-Distal,intron-Proximal	3.28536	8.95273	K562	RBM15
chr12	125397795	125397813	-	CDS,intron-Distal,intron-Proximal	3.22872	7.12361	K562	SND1
chr12	125397866	125397885	-	CDS,intron-Distal,intron-Proximal	3.65667	28.79893	K562	RBM15
chr12	125397262	125397327	-	CDS,intron-Distal	3.78728	18.85455	K562	UCHL5
chr12	125396704	125396726	-	CDS,intron-Distal	3.71820	28.77168	K562	RBM15
chr12	125397114	125397162	-	CDS,intron-Distal	3.01604	13.20340	K562	ZNF622
chr12	125398157	125398213	-	CDS,intron-Distal	4.22484	23.98510	K562	RPS3
chr12	125396714	125396726	-	CDS,intron-Distal	4.20032	12.42508	HepG2	RPS3
chr12	125396346	125396406	-	CDS,intron-Distal	3.52081	9.13319	HepG2	YBX3
chr12	125396345	125396411	-	CDS,intron-Distal	3.47570	28.31727	K562	UCHL5
chr12	125397261	125397354	-	CDS,intron-Distal	3.24219	32.57307	K562	ZNF622
chr12	125396706	125396726	-	CDS,intron-Distal	3.98063	19.09749	K562	SND1
chr12	125397799	125397813	-	CDS,intron-Distal,intron-Proximal	3.44002	10.55001	K562	UCHL5
chr12	125397623	125397687	-	CDS,intron-Distal	3.02989	23.30846	K562	UCHL5
chr12	125397997	125398074	-	CDS,intron-Distal,intron-Proximal	3.49277	29.17734	K562	UCHL5
chr12	125396709	125396726	-	CDS,intron-Distal	3.01994	6.21665	HepG2	SND1
chr12	125398175	125398223	-	CDS,intron-Distal	3.45395	43.37877	K562	ZNF622
chr12	125398172	125398241	-	CDS,intron-Distal	3.29734	14.60256	K562	RBM15
chr12	125398175	125398227	-	CDS,intron-Distal	4.36007	10.17410	HepG2	RPS3
chr12	125396349	125396414	-	CDS,intron-Distal	3.74834	10.40467	K562	YWHAG
chr12	125397522	125397590	-	CDS,intron-Distal,intron-Proximal	3.22520	24.23250	K562	ZNF622
chr12	125396707	125396726	-	CDS,intron-Distal	4.36455	40.56089	K562	RPS3
chr12	125396348	125396397	-	CDS,intron-Distal	3.86475	16.05505	K562	RPS3
chr12	125397629	125397667	-	CDS,intron-Distal	4.17964	15.85474	K562	RPS3
chr12	125396347	125396398	-	CDS,intron-Distal	3.30825	16.46966	K562	RBM15
chr12	125398163	125398230	-	CDS,intron-Distal	3.00020	6.86694	K562	TRA2A
chr12	125397885	125397894	-	CDS,intron-Distal,intron-Proximal	3.49790	16.82489	K562	RBM15
chr12	125398156	125398184	-	CDS,intron-Distal	3.59803	17.48702	K562	UCHL5
chr12	125396268	125396318	-	CDS,intron-Distal	3.47271	7.39753	HepG2	YBX3
chr12	125397866	125397893	-	CDS,intron-Distal,intron-Proximal	4.88418	13.59932	HepG2	G3BP1
chr12	125398057	125398082	-	CDS,intron-Distal,intron-Proximal	3.54034	8.70646	HepG2	YBX3
chr12	125397528	125397575	-	CDS,intron-Distal,intron-Proximal	3.24321	5.37811	HepG2	ZNF800
chr12	125398079	125398120	-	CDS,intron-Distal,intron-Proximal	3.10308	13.44335	K562	YBX3
chr12	125396346	125396400	-	CDS,intron-Distal	3.31590	6.52609	K562	GRWD1
chr12	125396357	125396395	-	CDS,intron-Distal	4.69121	4.18952	HepG2	SUB1
chr12	125397180	125397224	-	CDS,intron-Distal	3.40778	8.33163	HepG2	YBX3
chr12	125397793	125397813	-	CDS,intron-Distal,intron-Proximal	3.50570	4.82016	K562	FXR2
chr12	125398301	125398316	-	CDS,intron-Distal	3.39243	12.61130	HepG2	YBX3
chr12	125398002	125398082	-	CDS,intron-Distal,intron-Proximal	3.89831	7.03797	K562	SRSF7
chr12	125397257	125397309	-	CDS,intron-Distal	3.25220	5.98661	K562	TRA2A
chr12	125398253	125398298	-	CDS,intron-Distal	3.61663	30.98889	HepG2	SUB1
chr12	125396708	125396726	-	CDS,intron-Distal	3.63640	20.42040	K562	METAP2
chr12	125398223	125398251	-	CDS,intron-Distal	3.24839	45.74657	K562	ZNF622
chr12	125397718	125397754	-	CDS,intron-Distal,intron-Proximal	3.27741	4.12796	K562	LIN28B
chr12	125398289	125398301	-	CDS,intron-Distal	3.09651	10.79461	HepG2	YBX3
chr12	125397116	125397149	-	CDS,intron-Distal	3.59694	4.39950	HepG2	SND1
chr12	125397865	125397899	-	CDS,intron-Distal,intron-Proximal	3.05184	6.43363	HepG2	SND1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for UBC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for UBC is not available on ENCORE database.
108 RBPs can affect the levels of UBC.

The Knockdown/knockout RNA-Seq assay for UBC is not available on ENCORE database.

108 RBPs can affect the gene expression of UBC :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
UBC	ENSG00000150991.10	32203.67280	25385.36790	0.34310	10.62000	9.58970	HepG2	ACO1
UBC	ENSG00000150991.10	58621.77560	47020.42750	0.31800	2.30060	1.81100	HepG2	AKAP1
UBC	ENSG00000150991.10	47031.80430	33354.66650	0.49560	17.48230	16.02860	HepG2	AUH
UBC	ENSG00000150991.10	18398.85770	9045.99810	1.02420	28.23940	26.66090	HepG2	BOP1
UBC	ENSG00000150991.10	18415.60480	15504.44630	0.24810	2.69200	1.93100	HepG2	CALR
UBC	ENSG00000150991.10	11455.41500	8304.61770	0.46390	5.67690	4.72470	HepG2	CPSF6
UBC	ENSG00000150991.10	23595.36390	18278.09860	0.36830	3.83030	2.53410	HepG2	CPSF7
UBC	ENSG00000150991.10	59310.02820	33998.82960	0.80270	30.64800	28.98590	HepG2	CELF1
UBC	ENSG00000150991.10	36676.87890	45042.92930	-0.29640	2.29360	1.71880	HepG2	DDX3X
UBC	ENSG00000150991.10	29046.21690	20996.44840	0.46810	4.72680	3.74530	HepG2	DDX55
UBC	ENSG00000150991.10	69211.85180	38690.64910	0.83890	12.50400	11.30470	HepG2	DDX6
UBC	ENSG00000150991.10	18546.41540	20812.40130	-0.16630	1.97610	1.37080	HepG2	DNAJC21
UBC	ENSG00000150991.10	18766.13630	20628.35080	-0.13650	2.37440	1.76130	HepG2	DNAJC2
UBC	ENSG00000150991.10	21862.94400	26312.61610	-0.26730	3.14530	1.99810	HepG2	EIF3G
UBC	ENSG00000150991.10	31273.98940	41107.43340	-0.39440	3.18690	2.50120	HepG2	EIF4A3
UBC	ENSG00000150991.10	43785.97550	36064.95510	0.27980	3.67450	2.73260	HepG2	EIF4G1
UBC	ENSG00000150991.10	34035.00840	24803.59210	0.45640	7.46350	6.09500	HepG2	EWSR1
UBC	ENSG00000150991.10	21724.47140	17476.76550	0.31380	2.52630	1.31190	HepG2	FKBP4
UBC	ENSG00000150991.10	33992.12050	41472.54150	-0.28700	2.29260	1.66020	HepG2	FXR1
UBC	ENSG00000150991.10	11836.97660	9413.65320	0.33040	2.57130	1.95120	HepG2	GPKOW
UBC	ENSG00000150991.10	23193.81500	30461.74990	-0.39330	2.34370	1.31800	HepG2	GRSF1
UBC	ENSG00000150991.10	19439.86310	23371.63840	-0.26570	2.68250	1.99910	HepG2	HNRNPC
UBC	ENSG00000150991.10	11962.80500	8983.64780	0.41310	4.43270	3.65260	HepG2	HNRNPLL
UBC	ENSG00000150991.10	39364.33140	27735.87160	0.50500	4.44640	2.88870	HepG2	HSPD1
UBC	ENSG00000150991.10	27844.96250	23715.54070	0.23150	2.69600	1.97210	HepG2	ILF2
UBC	ENSG00000150991.10	27928.87770	41487.00630	-0.57090	7.20160	6.15790	HepG2	MAGOH
UBC	ENSG00000150991.10	30342.16040	41719.71410	-0.45940	4.38600	3.60820	HepG2	MATR3
UBC	ENSG00000150991.10	27818.19510	42702.86180	-0.61830	7.93270	6.88610	HepG2	NCBP2
UBC	ENSG00000150991.10	65519.28980	30078.68680	1.12310	5.30530	4.04710	HepG2	PABPC1
UBC	ENSG00000150991.10	33815.50060	41631.42640	-0.30000	7.17400	6.27130	HepG2	PCBP1
UBC	ENSG00000150991.10	28966.00380	42361.55630	-0.54840	21.05670	19.81810	HepG2	PTBP1
UBC	ENSG00000150991.10	27980.55620	34599.49490	-0.30630	2.45880	1.89220	HepG2	PUF60
UBC	ENSG00000150991.10	13322.42200	36702.90350	-1.46200	30.36760	28.31730	HepG2	PUM2
UBC	ENSG00000150991.10	28937.82160	25856.24020	0.16230	2.53030	1.93410	HepG2	PUS1
UBC	ENSG00000150991.10	34242.73720	45878.56190	-0.42200	9.12880	8.09350	HepG2	QKI
UBC	ENSG00000150991.10	41033.65490	24938.44700	0.71830	5.19550	4.24500	HepG2	RAVER1
UBC	ENSG00000150991.10	40257.95210	32008.07840	0.33070	6.53640	5.82130	HepG2	RBM22
UBC	ENSG00000150991.10	35092.40780	41637.76250	-0.24670	2.67560	2.01070	HepG2	RBM25
UBC	ENSG00000150991.10	22456.87320	32063.25180	-0.51380	6.71150	5.16110	HepG2	RBM27
UBC	ENSG00000150991.10	18632.45670	26036.75770	-0.48270	4.79850	3.39330	HepG2	RCC2
UBC	ENSG00000150991.10	28401.05930	47144.32570	-0.73110	39.18860	37.67500	HepG2	NELFE
UBC	ENSG00000150991.10	23058.78570	43908.56740	-0.92920	63.77030	61.65700	HepG2	RECQL
UBC	ENSG00000150991.10	34375.09620	28479.12110	0.27140	2.44110	1.79260	HepG2	RPLP0
UBC	ENSG00000150991.10	14475.39250	17257.43750	-0.25360	2.71240	2.10190	HepG2	RPS19
UBC	ENSG00000150991.10	21033.34330	29571.14870	-0.49150	6.44850	5.25700	HepG2	RPS2
UBC	ENSG00000150991.10	22657.09020	33056.14110	-0.54500	4.52660	3.50580	HepG2	RPS3A
UBC	ENSG00000150991.10	24460.40800	20675.92990	0.24240	5.96960	5.07830	HepG2	SAFB2
UBC	ENSG00000150991.10	13580.80450	8891.87620	0.61090	4.87930	3.96430	HepG2	SF3B1
UBC	ENSG00000150991.10	26520.65010	44103.80630	-0.73380	40.05850	38.31230	HepG2	SF3B4
UBC	ENSG00000150991.10	22175.16640	24111.71730	-0.12080	2.35350	1.75400	HepG2	SMN1
UBC	ENSG00000150991.10	14174.02290	9893.82910	0.51850	3.53820	2.65010	HepG2	SNRNP70
UBC	ENSG00000150991.10	103140.71920	36151.93140	1.51240	67.79030	66.16150	HepG2	SRFBP1
UBC	ENSG00000150991.10	31967.97480	46034.84230	-0.52610	24.82590	23.71790	HepG2	SRSF1
UBC	ENSG00000150991.10	39908.26170	34164.62780	0.22410	2.16410	1.60300	HepG2	SRSF5
UBC	ENSG00000150991.10	30601.37340	25972.78280	0.23650	4.11240	3.29010	HepG2	SRSF7
UBC	ENSG00000150991.10	50103.76520	37451.81090	0.41980	14.81090	13.71560	HepG2	SRSF9
UBC	ENSG00000150991.10	26228.95310	15132.80920	0.79340	19.40370	17.17940	HepG2	SUPT6H
UBC	ENSG00000150991.10	29904.63750	20902.10760	0.51660	6.00570	5.06670	HepG2	SUPV3L1
UBC	ENSG00000150991.10	31355.18510	41377.95850	-0.40020	9.21590	8.28810	HepG2	TAF15
UBC	ENSG00000150991.10	18136.93500	27140.70040	-0.58150	2.59410	1.55810	HepG2	TBRG4
UBC	ENSG00000150991.10	22952.96650	14010.23450	0.71210	10.13260	8.46470	HepG2	TFIP11
UBC	ENSG00000150991.10	18904.26530	22560.11160	-0.25510	3.29470	2.75650	HepG2	TIAL1
UBC	ENSG00000150991.10	23126.90590	19173.91920	0.27030	2.07130	1.51950	HepG2	U2AF1
UBC	ENSG00000150991.10	24486.06820	20369.08530	0.26550	2.97360	2.35660	HepG2	UTP3
UBC	ENSG00000150991.10	32698.49810	23203.55310	0.49480	14.27990	13.27830	HepG2	ZNF622
UBC	ENSG00000150991.10	52250.26450	21047.19170	1.31170	47.17120	44.88980	K562	AGGF1
UBC	ENSG00000150991.10	34511.69090	23129.55350	0.57720	10.57440	8.31610	K562	AKAP8
UBC	ENSG00000150991.10	47014.48290	21901.01740	1.10200	35.33710	32.57250	K562	AKAP8L
UBC	ENSG00000150991.10	28628.69530	35401.46610	-0.30630	2.97310	1.68650	K562	APOBEC3C
UBC	ENSG00000150991.10	34551.49110	22980.30930	0.58820	6.79780	5.27910	K562	ATP5C1
UBC	ENSG00000150991.10	11182.42630	7994.88380	0.48400	5.96970	4.67690	K562	BOP1
UBC	ENSG00000150991.10	6734.96000	10489.71170	-0.63920	3.20060	2.04930	K562	CCAR1
UBC	ENSG00000150991.10	10167.67030	8500.47720	0.25830	2.89220	2.09220	K562	CPSF6
UBC	ENSG00000150991.10	8068.03430	11741.96760	-0.54140	2.70430	1.39100	K562	DHX30
UBC	ENSG00000150991.10	33937.75700	23564.17660	0.52620	7.11390	5.59950	K562	DKC1
UBC	ENSG00000150991.10	14148.03540	18625.13500	-0.39660	4.39390	3.22620	K562	EFTUD2
UBC	ENSG00000150991.10	19553.62110	16220.44230	0.26950	3.96000	3.01610	K562	EIF3G
UBC	ENSG00000150991.10	22937.50270	19225.74260	0.25460	2.70460	1.57050	K562	EIF4B
UBC	ENSG00000150991.10	31354.77050	40122.28070	-0.35570	4.50000	3.31410	K562	EIF4G2
UBC	ENSG00000150991.10	25266.83940	18635.09540	0.43910	3.39490	1.93340	K562	EWSR1
UBC	ENSG00000150991.10	21598.80210	15757.68440	0.45480	4.07010	3.02790	K562	FIP1L1
UBC	ENSG00000150991.10	18873.38200	22201.13820	-0.23430	1.98470	1.45570	K562	FXR1
UBC	ENSG00000150991.10	30388.19710	24779.50010	0.29430	3.12420	1.57780	K562	G3BP1
UBC	ENSG00000150991.10	10577.48820	8115.56140	0.38210	4.84250	3.79600	K562	GPKOW
UBC	ENSG00000150991.10	20510.13580	24895.97200	-0.27960	3.21610	2.05650	K562	HNRNPA1
UBC	ENSG00000150991.10	32319.90090	14083.44690	1.19830	8.93640	6.34620	K562	HNRNPA2B1
UBC	ENSG00000150991.10	13628.25700	19430.95450	-0.51180	6.75160	5.85800	K562	HNRNPC
UBC	ENSG00000150991.10	13433.77260	17356.06020	-0.36960	3.06010	1.85410	K562	HNRNPF
UBC	ENSG00000150991.10	23386.50200	27571.18500	-0.23750	3.22530	2.26430	K562	HNRNPU
UBC	ENSG00000150991.10	32199.62430	26367.24640	0.28820	2.81030	1.60720	K562	IGF2BP3
UBC	ENSG00000150991.10	40234.85040	23240.83970	0.79170	18.76270	15.85470	K562	KIF1C
UBC	ENSG00000150991.10	19900.69010	27238.72920	-0.45280	7.00200	5.64050	K562	MAGOH
UBC	ENSG00000150991.10	35046.05540	22248.51120	0.65540	7.73700	5.58440	K562	MAK16
UBC	ENSG00000150991.10	21744.82400	27182.06760	-0.32200	3.31910	2.29750	K562	MATR3
UBC	ENSG00000150991.10	37308.10360	26035.83600	0.51890	4.95510	3.66840	K562	MBNL1
UBC	ENSG00000150991.10	10667.82300	7921.82120	0.42930	5.55120	4.28420	K562	METAP2
UBC	ENSG00000150991.10	16949.86820	18783.08070	-0.14820	2.22590	1.49720	K562	MTPAP
UBC	ENSG00000150991.10	37230.01580	18249.37740	1.02850	5.50320	4.10670	K562	NAA15
UBC	ENSG00000150991.10	27877.61760	21316.21660	0.38710	6.79730	4.90440	K562	NCBP2
UBC	ENSG00000150991.10	22444.51400	20869.02580	0.10490	2.30470	1.61790	K562	NSUN2
UBC	ENSG00000150991.10	30909.39490	12313.02600	1.32780	11.10380	8.66560	K562	PABPN1
UBC	ENSG00000150991.10	17515.95750	24234.04000	-0.46840	5.29690	3.93000	K562	PCBP2
UBC	ENSG00000150991.10	15090.08000	20618.15140	-0.45030	3.19880	2.30420	K562	PCBP3
UBC	ENSG00000150991.10	12500.48440	15815.59280	-0.33940	2.58590	1.81540	K562	POLR2G
UBC	ENSG00000150991.10	31813.10660	14632.91970	1.12030	7.12210	4.39900	K562	PPP1R8
UBC	ENSG00000150991.10	37311.58590	45620.65550	-0.29010	4.06920	2.89910	K562	PUM2
UBC	ENSG00000150991.10	86203.62550	21716.50910	1.98890	46.43740	44.14080	K562	PUS1
UBC	ENSG00000150991.10	47766.09260	21162.19350	1.17440	54.83610	52.09310	K562	RBM15
UBC	ENSG00000150991.10	20674.21580	25371.56440	-0.29540	2.86700	2.00820	K562	RBM22
UBC	ENSG00000150991.10	21719.42050	15975.33580	0.44300	15.38100	12.16530	K562	RPS10
UBC	ENSG00000150991.10	15522.60520	23770.30530	-0.61480	9.65180	7.66390	K562	RPS3
UBC	ENSG00000150991.10	30370.93420	11257.11860	1.43180	10.33910	7.54250	K562	SF1
UBC	ENSG00000150991.10	24341.74110	12933.49000	0.91220	3.59980	2.13120	K562	SNRNP200
UBC	ENSG00000150991.10	12481.40470	15073.99240	-0.27230	2.53680	1.56640	K562	SRFBP1
UBC	ENSG00000150991.10	14805.28930	22948.32490	-0.63230	14.41020	11.86850	K562	SRSF4
UBC	ENSG00000150991.10	29375.76490	24506.02240	0.26140	2.31340	1.36800	K562	SRSF5
UBC	ENSG00000150991.10	23936.25120	16731.54740	0.51650	14.88240	12.06860	K562	SSB
UBC	ENSG00000150991.10	34926.48150	15466.78460	1.17500	5.02190	2.89640	K562	SUPT6H
UBC	ENSG00000150991.10	11063.33230	14989.62540	-0.43820	4.10820	1.92950	K562	TRNAU1AP
UBC	ENSG00000150991.10	30304.10400	25108.93900	0.27120	5.56080	3.73670	K562	TROVE2
UBC	ENSG00000150991.10	51026.84560	22021.60570	1.21220	5.32380	3.34460	K562	UTP18
UBC	ENSG00000150991.10	25060.15760	18558.29190	0.43320	4.07190	2.60500	K562	UTP3
UBC	ENSG00000150991.10	17492.04680	19689.83460	-0.17080	2.11400	1.36650	K562	WDR43
UBC	ENSG00000150991.10	24655.52310	13150.40220	0.90670	4.88680	2.56010	K562	XPO5
UBC	ENSG00000150991.10	28670.40720	15216.74210	0.91380	5.03700	2.59690	K562	YTHDC2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for UBC is not available on ENCORE database.

12 RBPs can affect the splicing of UBC :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	UBC	ENSG00000150991.10	chr12	-	125397580	125397813	125397580	125397585	125398041	125398320	-0.10800	0.00000	0.00119	shorter	HepG2	DDX6
A3SS	UBC	ENSG00000150991.10	chr12	-	125397580	125397813	125397580	125397585	125398041	125398320	0.06700	0.00000	0.00003	longer	K562	PUM1
A3SS	UBC	ENSG00000150991.10	chr12	-	125397580	125397813	125397580	125397585	125398041	125398320	0.06700	0.00000	0.00212	longer	K562	EIF4G2
A3SS	UBC	ENSG00000150991.10	chr12	-	125398132	125398369	125398132	125398320	125399132	125399308	0.05600	0.00000	0.00000	longer	K562	AQR
A3SS	UBC	ENSG00000150991.10	chr12	-	125397580	125397813	125397580	125397585	125398041	125398320	-0.05900	0.00000	0.00002	shorter	K562	UTP18
A3SS	UBC	ENSG00000150991.10	chr12	-	125397580	125397813	125397580	125397585	125398041	125398320	0.06700	0.00000	0.00037	longer	K562	PUM2
A3SS	UBC	ENSG00000150991.10	chr12	-	125397580	125397813	125397580	125397585	125398041	125398320	-0.07300	0.00000	0.00025	shorter	K562	TARDBP
A3SS	UBC	ENSG00000150991.10	chr12	-	125397580	125397813	125397580	125397585	125398041	125398320	0.06700	0.00000	0.00510	longer	K562	APOBEC3C
A3SS	UBC	ENSG00000150991.10	chr12	-	125397580	125397813	125397580	125397585	125398041	125398320	0.10900	0.00003	0.02866	longer	HepG2	EFTUD2
A5SS	UBC	ENSG00000150991.10	chr12	-	125398041	125398320	125398269	125398320	125397580	125397813	-0.08700	0.00000	0.00004	shorter	HepG2	SRSF9
A5SS	UBC	ENSG00000150991.10	chr12	-	125398041	125398320	125398269	125398320	125397580	125397813	-0.05700	0.00002	0.01135	shorter	HepG2	TBRG4
RI	UBC	ENSG00000150991.10	chr12	-	125397851	125398320	125397851	125397866	125398094	125398320	-0.14300	0.00000	0.00011	excluded	K562	UCHL5

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

UBC

General Information

Functions

Localization

Domains (AlphaFold: UBC)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for UBC is not avaliable on ENCORE database.

50 proteins are bound to UBC RNA:

eCLIP assay for UBC is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for UBC is not available on ENCORE database.

108 RBPs can affect the gene expression of UBC :

The Knockdown/knockout RNA-Seq assay for UBC is not available on ENCORE database.

12 RBPs can affect the splicing of UBC :

The Knockdown/knockout RNA-Seq assay for UBC is not avaliable on ENCORE database.