RP11-108K14.8

General Information

Gene Name       : RP11-108K14.8
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-108K14.8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-108K14.8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-108K14.8 RNA is bound by 42 proteins.  







eCLIP assay for RP11-108K14.8 is not avaliable on ENCORE database.





42 proteins are bound to RP11-108K14.8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10135233607135233718+3'-UTR,CDS3.0889711.92871HepG2LSM11
chr10135233675135233742+3'-UTR5.268098.41109HepG2ZC3H11A
chr10135233612135233669+3'-UTR,CDS3.301155.91153HepG2CSTF2T
chr10135233923135233946+3'-UTR3.392723.75706HepG2LSM11
chr10135213083135213148+CDS,intron-Distal,intron-Proximal3.7966817.67867HepG2GRWD1
chr10135233053135233069+CDS4.0779224.09610HepG2PPIG
chr10135216194135216257+CDS,intron-Proximal3.279495.30074HepG2PABPN1
chr10135216266135216318+CDS,intron-Proximal4.9270311.26073HepG2PRPF8
chr10135215013135215087+CDS,intron-Distal,intron-Proximal3.4115218.62204HepG2U2AF1
chr10135215580135215655+CDS,intron-Proximal3.632404.68890K562SMNDC1
chr10135215081135215120+CDS,intron-Distal,intron-Proximal4.8932225.99705HepG2PPIG
chr10135212693135212728+CDS3.219968.80715HepG2BCLAF1
chr10135215550135215666+CDS,intron-Distal,intron-Proximal5.3688639.49305K562SF3B4
chr10135215712135215734+CDS4.2996719.43018HepG2GRWD1
chr10135215020135215079+CDS,intron-Distal,intron-Proximal3.588314.05508K562U2AF1
chr10135233002135233029+CDS3.587267.89598HepG2GRWD1
chr10135233538135233642+CDS4.521519.57031HepG2PABPN1
chr10135216198135216243+CDS4.5730254.50453HepG2PPIG
chr10135212005135212019+CDS4.9379712.59749HepG2PPIG
chr10135212673135212685+CDS,intron-Proximal3.9309612.29574HepG2PPIG
chr10135215733135215750+CDS,intron-Proximal3.271034.42426HepG2UCHL5
chr10135233021135233037+CDS3.6079614.96102HepG2PPIG
chr10135233529135233536+CDS,intron-Proximal3.139986.00978HepG2PPIG
chr10135215081135215129+CDS,intron-Distal,intron-Proximal3.088749.37943HepG2BCLAF1
chr10135215652135215752+CDS,intron-Proximal4.553225.21007K562SRSF1
chr10135216254135216277+CDS4.705066.09657HepG2LSM11
chr10135215080135215093+CDS,intron-Distal4.1685721.07492HepG2PRPF8
chr10135215610135215668+CDS,intron-Proximal5.0222965.55146HepG2SF3B4
chr10135215670135215739+CDS3.049664.20233HepG2SRSF9
chr10135215736135215751+CDS,intron-Proximal5.1098736.48475HepG2PPIG
chr10135216194135216198+CDS,intron-Proximal4.1067420.11890HepG2PPIG
chr10135216196135216248+CDS3.485904.20387K562ZNF622
chr10135216244135216271+CDS5.0012237.55472HepG2PPIG
chr10135233558135233605+CDS3.9538011.26887HepG2LSM11
chr10135215043135215081+CDS,intron-Distal4.1574526.09815HepG2PPIG
chr10135216194135216278+CDS,intron-Proximal3.8644711.84452HepG2UCHL5
chr10135215664135215710+CDS3.481284.40108HepG2U2AF1
chr10135215031135215043+CDS,intron-Distal,intron-Proximal3.6545818.00250HepG2PPIG
chr10135216271135216277+CDS5.5807228.40682HepG2PPIG
chr10135233037135233053+CDS3.9450122.98343HepG2PPIG
chr10135232982135233009+CDS,intron-Proximal4.8493127.28707HepG2PPIG
chr10135213055135213102+CDS,intron-Distal4.239254.67299K562DDX24
chr10135215006135215087+CDS,intron-Distal,intron-Proximal3.890845.25037K562U2AF2
chr10135233023135233102+CDS,intron-Proximal3.014889.01751HepG2BUD13
chr10135232981135233077+CDS,intron-Proximal3.732898.96386HepG2PABPN1
chr10135213054135213230+CDS,intron-Distal,intron-Proximal3.503716.88667K562BUD13
chr10135233526135233540+CDS,intron-Proximal3.848516.65791HepG2BUD13
chr10135233592135233652+CDS3.851315.76420HepG2EIF3H
chr10135212728135212832+CDS,intron-Distal,intron-Proximal4.853345.17615K562AQR
chr10135211973135212016+CDS3.155006.27353HepG2GRWD1
chr10135211983135212020+CDS,intron-Proximal3.163668.54277HepG2BCLAF1
chr10135215088135215119+CDS,intron-Distal,intron-Proximal3.995405.42009HepG2EFTUD2
chr10135213051135213083+CDS,intron-Distal3.3063410.22686HepG2GRWD1
chr10135215674135215712+CDS4.0277216.74792HepG2GRWD1
chr10135215077135215126+CDS,intron-Distal,intron-Proximal3.059203.90322HepG2UCHL5
chr10135216194135216260+CDS,intron-Proximal3.8024917.91318HepG2SRSF1
chr10135212672135212690+CDS,intron-Proximal3.038676.70954HepG2BCLAF1
chr10135216194135216200+CDS,intron-Proximal3.039626.92380HepG2GRWD1
chr10135215668135215736+CDS4.6799159.98818HepG2PPIG
chr10135232983135233013+CDS,intron-Proximal3.212875.12988HepG2LSM11
chr10135233069135233097+CDS,intron-Proximal4.2034525.79591HepG2PPIG
chr10135213035135213133+CDS,intron-Distal,intron-Proximal3.027067.20172HepG2UCHL5
chr10135213047135213101+CDS,intron-Distal3.6843334.54937HepG2PPIG
chr10135215673135215733+CDS4.911329.00893HepG2UCHL5
chr10135216192135216253+CDS,intron-Proximal4.553224.99251K562SRSF1
chr10135215093135215103+CDS,intron-Distal,intron-Proximal5.7334757.92169HepG2PRPF8
chr10135215734135215743+CDS3.252288.70156HepG2GRWD1
chr10135213101135213131+CDS,intron-Distal,intron-Proximal4.3143930.77438HepG2PPIG
chr10135215012135215084+CDS,intron-Distal,intron-Proximal3.9239662.35942HepG2U2AF2
chr10135222018135222057+intron-Distal3.133216.04026HepG2MATR3
chr10135225459135225550+intron-Distal5.9311612.59980HepG2HNRNPM
chr10135219280135219321+intron-Distal3.466923.39827HepG2MATR3
chr10135228962135229018+intron-Distal3.805415.57520K562EXOSC5
chr10135225483135225522+intron-Distal4.034506.25619HepG2SUGP2
chr10135225458135225522+intron-Distal3.694515.42643HepG2MATR3
chr10135216901135217059+intron-Distal4.0204115.41371HepG2DDX59
chr10135225709135225765+intron-Distal4.060126.41051K562EXOSC5
chr10135222104135222153+intron-Distal3.502034.73075K562MATR3
chr10135222641135222694+intron-Distal4.080616.40934HepG2HNRNPM
chr10135229300135229397+intron-Distal4.033568.04287K562HNRNPM
chr10135228707135228795+intron-Distal3.584268.14948HepG2SUGP2
chr10135229456135229566+intron-Distal3.435364.45974HepG2GTF2F1
chr10135217438135217492+intron-Distal3.9490911.14376HepG2HNRNPM
chr10135220750135220810+intron-Distal4.3628212.17858HepG2HNRNPM
chr10135221388135221424+intron-Distal5.133517.71312K562EXOSC5
chr10135222232135222273+intron-Distal4.137624.18579K562MATR3
chr10135217119135217213+intron-Distal3.521168.44177HepG2HNRNPM
chr10135220822135220849+intron-Distal3.146473.35050HepG2SUGP2
chr10135207827135207904+CDS,intron-Distal,intron-Proximal3.400335.13777HepG2PRPF8
chr10135225462135225530+intron-Distal5.3481611.33028K562HNRNPM
chr10135228701135228798+intron-Distal5.1190717.10772K562EXOSC5
chr10135221829135221862+intron-Distal5.7582712.32537K562EXOSC5
chr10135229305135229379+intron-Distal3.591707.15089HepG2HNRNPM
chr10135221892135221906+intron-Distal4.500984.80399K562EXOSC5
chr10135225708135225771+intron-Distal3.079757.62372HepG2MATR3
chr10135229845135229879+intron-Distal3.546024.61337K562EXOSC5
chr10135225145135225208+intron-Distal5.214826.42900HepG2PTBP1
chr10135207925135208068+intron-Distal,intron-Proximal3.078645.14461HepG2HNRNPK
chr10135225025135225103+intron-Distal4.138586.91197HepG2MATR3
chr10135216500135216563+intron-Distal3.872353.33442K562HNRNPK
chr10135228958135229021+intron-Distal3.740657.98315K562HNRNPM
chr10135228936135229070+intron-Distal4.497966.60828HepG2EXOSC5
chr10135217649135217740+intron-Distal3.151965.01731HepG2HNRNPC
chr10135218563135218616+intron-Distal4.158904.03833K562HNRNPM
chr10135214636135214689+intron-Distal3.173113.12788HepG2DGCR8
chr10135217348135217404+intron-Distal3.385063.72904K562EXOSC5
chr10135220752135220801+intron-Distal3.118214.60533K562EXOSC5
chr10135216897135217030+intron-Distal3.579525.11028HepG2PCBP2
chr10135223080135223109+intron-Distal3.944254.91037K562EXOSC5
chr10135225710135225763+intron-Distal4.048427.53863K562HNRNPM
chr10135229446135229535+intron-Distal3.997964.80552HepG2EXOSC5
chr10135221580135221759+intron-Distal5.8296723.36966K562EXOSC5
chr10135221674135221755+intron-Distal3.731213.32061HepG2STAU2
chr10135228951135229032+intron-Distal5.2184716.55173HepG2HNRNPM
chr10135207696135207786+5'-UTR,CDS,intron-Distal,intron-Proximal3.6171010.61046HepG2PPIG
chr10135223036135223134+intron-Distal3.123508.36568HepG2SUGP2
chr10135222619135222711+intron-Distal3.5717813.91945HepG2MATR3
chr10135222021135222040+intron-Distal4.7843112.87128K562EXOSC5
chr10135215365135215413+intron-Distal3.081293.98662HepG2HNRNPK
chr10135222250135222325+intron-Distal4.857249.69330K562EXOSC5
chr10135222040135222081+intron-Distal5.6169323.70401K562EXOSC5
chr10135218563135218617+intron-Distal3.991546.92280HepG2HNRNPM
chr10135219278135219317+intron-Distal4.457214.78128HepG2SUGP2
chr10135207707135207805+5'-UTR,CDS,intron-Distal,intron-Proximal4.009453.30664K562NONO
chr10135219275135219325+intron-Distal3.737193.68481HepG2HNRNPM
chr10135228636135228763+intron-Distal3.687727.76386HepG2EXOSC5
chr10135233203135233273+intron-Distal4.177418.42985HepG2CSTF2T
chr10135225711135225763+intron-Distal4.106374.94813HepG2HNRNPM
chr10135220628135220686+intron-Distal3.928048.17180K562EXOSC5
chr10135220624135220718+intron-Distal3.462855.42728HepG2HNRNPM
chr10135225420135225462+intron-Distal3.319864.32378K562HNRNPM
chr10135215189135215356+intron-Distal,intron-Proximal4.679116.52680K562HNRNPK
chr10135222537135222566+intron-Distal3.503455.85269K562EXOSC5
chr10135220754135220834+intron-Distal4.885468.13679K562HNRNPM
chr10135223044135223137+intron-Distal4.3857611.67285HepG2MATR3
chr10135226133135226155+intron-Distal3.232183.10961HepG2MATR3
chr10135233197135233274+intron-Distal3.677675.44474HepG2FAM120A
chr10135222258135222304+intron-Distal3.362625.72064HepG2MATR3
chr10135222625135222705+intron-Distal4.033085.97215K562MATR3
chr10135225391135225459+intron-Distal4.850894.66899HepG2HNRNPM
chr10135226132135226203+intron-Distal3.5928410.35946HepG2SUGP2
chr10135214740135214794+intron-Distal4.922666.41859K562DGCR8
chr10135233193135233302+intron-Distal,intron-Proximal4.836786.12846K562EWSR1
chr10135229479135229538+intron-Distal4.626754.80399K562EXOSC5
chr10135222325135222363+intron-Distal5.314058.69493K562EXOSC5
chr10135229449135229580+intron-Distal3.562395.38180HepG2FAM120A
chr10135218221135218286+intron-Distal5.040307.71312K562EXOSC5
chr10135217100135217176+intron-Distal4.834696.08869K562EXOSC5
chr10135215524135215551+intron-Distal3.286014.65722HepG2SF3B4
chr10135222829135222959+intron-Distal3.174969.23213HepG2SUGP2
chr10135229456135229583+intron-Distal4.6999618.28858HepG2HNRNPM
chr10135225582135225632+intron-Distal3.562914.14896HepG2HNRNPM
chr10135221694135221744+intron-Distal5.000487.15419HepG2MATR3
chr10135220822135220849+intron-Distal4.783296.41304K562EXOSC5
chr10135222301135222361+intron-Distal4.011055.89423HepG2HNRNPM
chr10135220743135220799+intron-Distal3.361645.12973HepG2MATR3
chr10135219686135219765+intron-Distal4.118217.31419K562EXOSC5
chr10135225572135225665+intron-Distal4.1694114.95822HepG2MATR3
chr10135214753135214821+intron-Distal4.289768.02251HepG2HNRNPM
chr10135229468135229589+intron-Distal5.4113419.42447K562HNRNPM
chr10135222079135222097+intron-Distal4.093613.60235HepG2HNRNPM
chr10135225583135225670+intron-Distal3.217683.26837HepG2HNRNPC
chr10135222652135222700+intron-Distal4.8560020.57628K562EXOSC5
chr10135222104135222156+intron-Distal3.151778.42485K562EXOSC5
chr10135221685135221746+intron-Distal5.7011110.04692HepG2HNRNPM
chr10135229101135229165+intron-Distal4.470029.69342K562EXOSC5
chr10135221603135221674+intron-Distal4.653116.62732K562HNRNPM
chr10135220479135220533+intron-Distal4.275057.61465K562EXOSC5
chr10135214620135214692+intron-Distal3.982206.63019HepG2GTF2F1
chr10135216520135216565+intron-Distal5.6804710.05561HepG2HNRNPK
chr10135221683135221753+intron-Distal5.4833612.60442K562HNRNPM
chr10135215531135215610+intron-Distal,intron-Proximal3.9086136.55499HepG2PPIG
chr10135217647135217726+intron-Distal3.851723.82343K562HNRNPC
chr10135225592135225665+intron-Distal3.247145.05821K562MATR3
chr10135224922135224976+intron-Distal4.102246.98272HepG2MATR3
chr10135224478135224519+intron-Distal3.272246.36326HepG2SUGP2
chr10135220629135220705+intron-Distal3.250443.33633HepG2MATR3
chr10135222846135222897+intron-Distal4.8649012.22629K562EXOSC5
chr10135221951135221986+intron-Distal4.313893.60235HepG2HNRNPM
chr10135226203135226233+intron-Distal3.361876.07779HepG2SUGP2
chr10135229032135229119+intron-Distal4.8115518.36243HepG2HNRNPM
chr10135216899135216992+intron-Distal6.6901328.74470HepG2HNRNPK
chr10135225715135225759+intron-Distal3.105486.91240HepG2SUGP2
chr10135219809135219866+intron-Distal3.343594.02462K562TIA1
chr10135220890135220919+intron-Distal4.575775.12432K562EXOSC5
chr10135222026135222071+intron-Distal4.834686.95924HepG2HNRNPM
chr10135215536135215601+intron-Distal,intron-Proximal3.2148016.03904HepG2SF3A3
chr10135222932135222956+intron-Distal3.988766.71166K562EXOSC5
chr10135229618135229661+intron-Distal3.708504.02190K562EXOSC5
chr10135229323135229387+intron-Distal4.6360311.57958K562EXOSC5
chr10135214600135214704+intron-Distal3.3671210.80883HepG2PRPF4
chr10135222311135222354+intron-Distal4.662905.01910HepG2MATR3
chr10135229180135229286+intron-Distal5.6233511.00212K562EXOSC5
chr10135218555135218606+intron-Distal3.490813.72904K562EXOSC5
chr10135215551135215588+intron-Distal,intron-Proximal3.3785317.10140HepG2SF3B4
chr10135229027135229115+intron-Distal4.8050013.15564K562HNRNPM
chr10135223088135223154+intron-Distal4.3764510.57469K562HNRNPM
chr10135233273135233305+intron-Distal3.974413.69819HepG2CSTF2T
chr10135220486135220554+intron-Distal3.635527.98957HepG2SUGP2
chr10135229038135229217+intron-Distal4.354413.08314K562TARDBP
chr10135223007135223141+intron-Distal3.498266.40663HepG2HNRNPM
chr10135207651135207780+5'-UTR,CDS,intron-Distal,intron-Proximal3.4321612.14904HepG2NCBP2
chr10135216903135217024+intron-Distal4.6602112.43349K562HNRNPK
chr10135225027135225099+intron-Distal4.204527.43032K562MATR3
chr10135225372135225416+intron-Distal3.844805.80877K562EXOSC5
chr10135207908135208070+intron-Distal,intron-Proximal4.7238310.06964HepG2PCBP2
chr10135215175135215269+intron-Distal,intron-Proximal5.6776144.05055HepG2HNRNPK
chr10135218347135218423+intron-Distal3.788133.68481HepG2HNRNPM
chr10135220642135220690+intron-Distal4.414774.53347HepG2SUGP2
chr10135221584135221681+intron-Distal4.642048.37039HepG2HNRNPM
chr10135219731135219857+intron-Distal4.033085.97215K562MATR3
chr10135229427135229583+intron-Distal4.149205.82353HepG2XRN2
chr10135222604135222644+intron-Distal4.575779.69330K562EXOSC5
chr10135225375135225412+intron-Distal3.693356.55984HepG2SUGP2
chr10135232936135232975+intron-Proximal5.011918.10894HepG2SF3B4
chr10135209174135209209+intron-Proximal4.236883.56713HepG2SF3B4
chr10135213123135213167+intron-Distal,intron-Proximal3.564156.22597HepG2EFTUD2
chr10135215598135215610+intron-Proximal4.6892059.51252HepG2SF3B4
chr10135215601135215649+intron-Proximal5.0743459.61364HepG2SF3A3
chr10135215102135215138+intron-Distal,intron-Proximal3.084513.27712HepG2U2AF1
chr10135215103135215144+intron-Distal,intron-Proximal5.3492263.94283HepG2PRPF8
chr10135213154135213194+intron-Distal,intron-Proximal5.8251722.65908HepG2PRPF8
chr10135213135135213154+intron-Distal,intron-Proximal4.7853518.79924HepG2PRPF8
chr10135215588135215598+intron-Proximal3.9672329.37640HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-108K14.8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-108K14.8 is not available on ENCORE database.

  • 6 RBPs can affect the levels of RP11-108K14.8.  








The Knockdown/knockout RNA-Seq assay for RP11-108K14.8 is not available on ENCORE database.





6 RBPs can affect the gene expression of RP11-108K14.8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-108K14.8ENSG00000254536.115.094802.025602.897502.277901.68510HepG2CELF1
RP11-108K14.8ENSG00000254536.117.501202.481102.818302.030901.49820HepG2ETF1
RP11-108K14.8ENSG00000254536.116.927102.167302.965202.463301.74610HepG2NOL12
RP11-108K14.8ENSG00000254536.17.577900.0000099999.999902.402301.40450K562HNRNPA1
RP11-108K14.8ENSG00000254536.18.166400.0000099999.999902.694401.77730K562HNRNPM
RP11-108K14.8ENSG00000254536.115.021200.0000099999.999904.241502.06800K562SMN1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-108K14.8 is not available on ENCORE database.





1 RBPs can affect the splicing of RP11-108K14.8 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A5SSRP11-108K14.8ENSG00000254536.1chr10+1352130321352131571352130321352131231352150321352150940.170000.000390.01837longerHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RP11-108K14.8 is not avaliable on ENCORE database.