TSPAN7

General Information

Gene Name       : TSPAN7
Gene ID             : ENSG00000156298.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TSPAN7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TSPAN7ENSG00000156298.120.120.030.07ENCSR000AEF
HepG2TSPAN7ENSG00000156298.1231.7630.9431.35ENCSR985KAT
K562TSPAN7ENSG00000156298.120.100.060.08ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TSPAN7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TSPAN7 RNA is bound by 14 proteins.  







eCLIP assay for TSPAN7 is not avaliable on ENCORE database.





14 proteins are bound to TSPAN7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX3853495738534977+3'-UTR,CDS,intron-Proximal3.348966.50171HepG2SND1
chrX3854731038547389+3'-UTR4.941008.06095HepG2IGF2BP1
chrX3853497738535062+3'-UTR,CDS4.8566217.11207HepG2SND1
chrX3852537438525423+3'-UTR,CDS,intron-Proximal5.616457.10244HepG2DDX3X
chrX3854685538546906+3'-UTR,CDS3.760525.23222HepG2SND1
chrX3854740038547512+3'-UTR4.491189.32485HepG2IGF2BP1
chrX3854793538548024+3'-UTR4.0440313.07064HepG2FUBP3
chrX3854791938547973+3'-UTR3.295973.28764HepG2LARP4
chrX3854731538547393+3'-UTR3.968203.34998HepG2IGF2BP3
chrX3854797338548015+3'-UTR3.347744.08867HepG2LARP4
chrX3852537238525467+3'-UTR,CDS,intron-Proximal5.367324.90304HepG2RPS3
chrX3854729038547381+3'-UTR3.9998815.71357HepG2PCBP2
chrX3853348438533572+3'-UTR,CDS,intron-Proximal4.3911916.34553HepG2SND1
chrX3853506238535113+3'-UTR,CDS4.876185.20042HepG2SND1
chrX3842086238420926+5'-UTR,CDS,intron-Distal,intron-Proximal5.4090412.09955HepG2PRPF8
chrX3842807238428131+intron-Distal4.299784.27936HepG2PTBP1
chrX3842573338425844+intron-Distal4.204854.24478HepG2CSTF2
chrX3843146438431727+intron-Distal3.633963.11000HepG2HNRNPM
chrX3844372738443785+intron-Distal3.833343.09122HepG2PTBP1
chrX3846677938466835+intron-Distal4.441276.62423HepG2XPO5
chrX3842879938428848+intron-Distal3.304793.10640HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TSPAN7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TSPAN7 is not available on ENCORE database.

  • 110 RBPs can affect the levels of TSPAN7.  








The Knockdown/knockout RNA-Seq assay for TSPAN7 is not available on ENCORE database.





110 RBPs can affect the gene expression of TSPAN7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TSPAN7ENSG00000156298.82015.126101516.731100.409803.015402.03010HepG2ABCF1
TSPAN7ENSG00000156298.82494.177801167.172601.0954049.6330047.85290HepG2ACO1
TSPAN7ENSG00000156298.8593.04020916.66620-0.628305.993404.59980HepG2ADAR
TSPAN7ENSG00000156298.81929.681001405.952300.456703.536802.36630HepG2AKAP8
TSPAN7ENSG00000156298.82010.236601368.533400.554607.070904.95670HepG2ATP5C1
TSPAN7ENSG00000156298.83531.236401724.432501.0340046.0962043.90310HepG2AUH
TSPAN7ENSG00000156298.81766.76260945.406900.9020015.6394014.38200HepG2BOP1
TSPAN7ENSG00000156298.81455.423201136.274600.357003.021801.73470HepG2BUD13
TSPAN7ENSG00000156298.81432.73520992.451800.529606.893405.74840HepG2CALR
TSPAN7ENSG00000156298.82235.367701303.791800.777707.785506.13430HepG2CCAR1
TSPAN7ENSG00000156298.82330.425301342.408600.7957011.5248010.05200HepG2CIRBP
TSPAN7ENSG00000156298.82057.601001382.755000.573303.459302.59740HepG2CNOT7
TSPAN7ENSG00000156298.82135.16610867.958701.2986016.4579014.94790HepG2CPSF6
TSPAN7ENSG00000156298.8950.037301248.94250-0.394703.653402.38670HepG2CPSF7
TSPAN7ENSG00000156298.8402.77990594.67670-0.562104.198102.90400HepG2CSTF2
TSPAN7ENSG00000156298.81531.77770978.556300.646404.347202.50320HepG2CSTF2T
TSPAN7ENSG00000156298.81767.038101239.300200.511709.095808.05600HepG2CELF1
TSPAN7ENSG00000156298.82137.474201332.460100.6817022.0414020.31010HepG2DAZAP1
TSPAN7ENSG00000156298.81488.165201079.432800.463208.783907.45130HepG2DDX19B
TSPAN7ENSG00000156298.81531.471101053.777200.539206.139705.17590HepG2DDX21
TSPAN7ENSG00000156298.81251.329301031.590100.278502.126401.33580HepG2DDX24
TSPAN7ENSG00000156298.81390.47040946.532500.554704.439003.48290HepG2DDX55
TSPAN7ENSG00000156298.82346.64960985.623001.2514012.1346010.18080HepG2DDX59
TSPAN7ENSG00000156298.81738.342201315.483100.402003.500002.37050HepG2DDX5
TSPAN7ENSG00000156298.82449.170801404.955200.801709.650708.57280HepG2DDX6
TSPAN7ENSG00000156298.81244.58060890.275000.483204.807303.53180HepG2DHX30
TSPAN7ENSG00000156298.81012.03110772.526300.389502.646701.55920HepG2EFTUD2
TSPAN7ENSG00000156298.81486.03710970.701900.614304.938703.45700HepG2AGO1
TSPAN7ENSG00000156298.82922.661201350.945201.1132020.8730019.34750HepG2EIF2S1
TSPAN7ENSG00000156298.8703.93940995.38130-0.499805.131503.71680HepG2EIF3G
TSPAN7ENSG00000156298.82103.492001493.111800.494404.033203.26530HepG2EIF4A3
TSPAN7ENSG00000156298.83253.556401453.451301.1624015.6633014.10870HepG2EIF4B
TSPAN7ENSG00000156298.82066.079701259.319900.714205.717604.56770HepG2EIF4G2
TSPAN7ENSG00000156298.81666.939701979.83080-0.248202.967002.34760HepG2ETF1
TSPAN7ENSG00000156298.81542.475201140.469300.435504.674403.59320HepG2EWSR1
TSPAN7ENSG00000156298.8873.03370672.498400.376402.753801.59040HepG2FAM120A
TSPAN7ENSG00000156298.8687.066801531.50920-1.1564016.4179014.80760HepG2FIP1L1
TSPAN7ENSG00000156298.81285.77130787.856000.706506.739004.86440HepG2FKBP4
TSPAN7ENSG00000156298.81618.64680947.247200.772904.433903.45260HepG2FUBP3
TSPAN7ENSG00000156298.81783.662901186.862500.587604.110102.75880HepG2FUS
TSPAN7ENSG00000156298.82092.935601397.295200.582805.772904.82560HepG2G3BP1
TSPAN7ENSG00000156298.82211.38030983.963501.1682019.9834018.43170HepG2GPKOW
TSPAN7ENSG00000156298.81443.62530941.620600.616405.709403.11030HepG2GRWD1
TSPAN7ENSG00000156298.81584.369601114.270100.507709.175407.53120HepG2HDGF
TSPAN7ENSG00000156298.8736.39450931.89310-0.339702.444501.83450HepG2HNRNPA1
TSPAN7ENSG00000156298.81621.916001224.613300.405306.083104.78940HepG2HNRNPA2B1
TSPAN7ENSG00000156298.81634.815901142.276500.517103.773402.12760HepG2HNRNPAB
TSPAN7ENSG00000156298.81327.524401036.549800.356802.813302.11500HepG2HNRNPC
TSPAN7ENSG00000156298.81869.621501217.764700.6184013.2519011.83720HepG2HNRNPF
TSPAN7ENSG00000156298.81491.02620939.008600.667003.943403.20520HepG2HNRNPLL
TSPAN7ENSG00000156298.8585.646701056.60590-0.8513012.8705011.07260HepG2HNRNPM
TSPAN7ENSG00000156298.81455.071101029.697400.498808.571907.54870HepG2HNRNPU
TSPAN7ENSG00000156298.82649.089901530.877900.791008.544006.45080HepG2HSPD1
TSPAN7ENSG00000156298.81913.211301199.144900.673905.104304.15020HepG2IGF2BP1
TSPAN7ENSG00000156298.82167.502001332.631700.701702.844701.84880HepG2IGF2BP3
TSPAN7ENSG00000156298.81377.746901066.895300.368805.788504.33040HepG2KIF1C
TSPAN7ENSG00000156298.82951.435001377.245301.0995015.5223013.59740HepG2LARP4
TSPAN7ENSG00000156298.81859.525501506.531200.303602.020101.45580HepG2MAGOH
TSPAN7ENSG00000156298.81161.492101515.04110-0.383402.227301.65770HepG2MATR3
TSPAN7ENSG00000156298.8997.762601321.26960-0.405204.412103.45020HepG2NOL12
TSPAN7ENSG00000156298.8787.371901264.01100-0.682903.991402.91290HepG2PABPC1
TSPAN7ENSG00000156298.81465.637301019.235400.523909.000107.61330HepG2PARN
TSPAN7ENSG00000156298.81188.555701483.09040-0.319404.048503.34160HepG2PCBP1
TSPAN7ENSG00000156298.8742.127301123.58390-0.598403.817802.60410HepG2PCBP2
TSPAN7ENSG00000156298.8464.59150622.14370-0.421303.292601.94610HepG2PKM
TSPAN7ENSG00000156298.8734.18560918.40940-0.323002.858602.11170HepG2PPIL4
TSPAN7ENSG00000156298.81016.13210730.214400.476603.618002.70790HepG2PRPF8
TSPAN7ENSG00000156298.82088.143101261.292900.7272012.2846011.14750HepG2PUF60
TSPAN7ENSG00000156298.81763.699701338.947900.397408.053807.15160HepG2PUM1
TSPAN7ENSG00000156298.82073.288701634.442000.343003.464602.77610HepG2QKI
TSPAN7ENSG00000156298.8230.305401084.41720-2.2353028.2317026.22190HepG2RAVER1
TSPAN7ENSG00000156298.81868.250001436.911900.378604.150903.12540HepG2RBM15
TSPAN7ENSG00000156298.82393.557801654.782300.5324010.222809.36760HepG2RBM22
TSPAN7ENSG00000156298.81280.645801679.47000-0.391105.761205.02550HepG2NELFE
TSPAN7ENSG00000156298.81118.370701564.12680-0.484008.209607.23190HepG2RECQL
TSPAN7ENSG00000156298.81697.976901311.917300.372002.991402.28430HepG2RPLP0
TSPAN7ENSG00000156298.8976.68030734.656300.410702.915501.94820HepG2SERBP1
TSPAN7ENSG00000156298.81085.997901493.45750-0.459602.675802.01320HepG2SF3A3
TSPAN7ENSG00000156298.81389.34500929.470400.579806.442505.40380HepG2SF3B1
TSPAN7ENSG00000156298.81396.927501209.444400.207802.291601.64360HepG2SLBP
TSPAN7ENSG00000156298.8878.958501069.38170-0.282903.079102.40510HepG2SMN1
TSPAN7ENSG00000156298.81086.647701869.03360-0.7824022.7256021.65070HepG2SRFBP1
TSPAN7ENSG00000156298.81375.917901639.96150-0.253302.928502.44570HepG2SRSF1
TSPAN7ENSG00000156298.8738.534901000.00720-0.437302.402201.47740HepG2SRSF3
TSPAN7ENSG00000156298.82127.537201196.433600.830305.693504.75270HepG2SRSF7
TSPAN7ENSG00000156298.81148.665301334.16630-0.216001.936401.45890HepG2SRSF9
TSPAN7ENSG00000156298.82120.843801473.965400.524809.144108.22030HepG2TAF15
TSPAN7ENSG00000156298.82555.71590915.071201.4817015.3647013.88490HepG2TARDBP
TSPAN7ENSG00000156298.82401.789401498.140400.680803.203302.05780HepG2TBRG4
TSPAN7ENSG00000156298.8940.61040631.578100.574503.615602.49460HepG2TFIP11
TSPAN7ENSG00000156298.8628.037401000.57720-0.671909.080208.26650HepG2TIAL1
TSPAN7ENSG00000156298.8778.066601009.48540-0.375704.252303.58240HepG2TRIM56
TSPAN7ENSG00000156298.8381.68300556.63630-0.544403.616402.75110HepG2UCHL5
TSPAN7ENSG00000156298.81546.836901278.722200.274502.160201.61740HepG2UTP3
TSPAN7ENSG00000156298.82209.989601084.155101.0274037.2173035.31450HepG2ZC3H8
TSPAN7ENSG00000156298.8951.179601456.66170-0.6149014.9088013.88990HepG2ZNF622
TSPAN7ENSG00000156298.838.851206.519902.574904.871102.56840K562ADAR
TSPAN7ENSG00000156298.883.5648013.864802.591408.847307.89510K562AQR
TSPAN7ENSG00000156298.887.5797010.863303.0110010.515008.44380K562CNOT7
TSPAN7ENSG00000156298.889.0786023.505501.922005.008503.68890K562CELF1
TSPAN7ENSG00000156298.82.8456015.36560-2.432902.117601.36270K562DKC1
TSPAN7ENSG00000156298.836.541308.818802.050803.520201.64540K562ESF1
TSPAN7ENSG00000156298.840.6574012.009201.759303.735702.42020K562GLRX3
TSPAN7ENSG00000156298.857.0798020.614301.469203.334302.46400K562GPKOW
TSPAN7ENSG00000156298.852.3220019.335201.436102.085501.42280K562GRSF1
TSPAN7ENSG00000156298.884.2138010.988202.9380010.987109.86340K562HNRNPC
TSPAN7ENSG00000156298.848.128209.959402.272704.544102.68740K562ILF2
TSPAN7ENSG00000156298.848.9101017.600501.474402.686701.76990K562KRR1
TSPAN7ENSG00000156298.836.4473012.627301.529202.689601.89150K562MTPAP
TSPAN7ENSG00000156298.869.5175014.023502.309407.988706.81270K562NSUN2
TSPAN7ENSG00000156298.835.7772010.436801.777302.726401.50290K562PABPC1
TSPAN7ENSG00000156298.8113.1421023.108202.2916010.249708.65490K562PCBP3
TSPAN7ENSG00000156298.880.9975017.724302.192108.272206.91220K562POLR2G
TSPAN7ENSG00000156298.835.4087013.847501.354402.334601.58010K562SF3A3
TSPAN7ENSG00000156298.839.1957014.187901.465902.655401.73510K562SRPK2
TSPAN7ENSG00000156298.853.0261018.061501.553703.848202.45260K562SRSF7
TSPAN7ENSG00000156298.855.7893013.379902.059804.742803.38140K562SUPV3L1
TSPAN7ENSG00000156298.833.097909.477501.804102.731801.80170K562TIAL1
TSPAN7ENSG00000156298.837.0278012.722801.541102.752601.87720K562WDR3
TSPAN7ENSG00000156298.881.7523015.612602.388508.166206.55870K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TSPAN7 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TSPAN7 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TSPAN7 is not avaliable on ENCORE database.