NAP1L4

General Information

Gene Name : NAP1L4
Gene ID : ENSG00000205531.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NAP1L4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NAP1L4	ENSG00000205531.12	88.38	86.67	87.53	ENCSR000AEF
HepG2	NAP1L4	ENSG00000205531.12	92.72	145.96	119.34	ENCSR985KAT
K562	NAP1L4	ENSG00000205531.12	110.98	124.00	117.49	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NAP1L4 is not avaliable on ENCORE database.

Proteins bound to RNA

NAP1L4 RNA is bound by 64 proteins.

CanvasJS.com

eCLIP assay for NAP1L4 is not avaliable on ENCORE database.

64 proteins are bound to NAP1L4 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	2985066	2985071	-	intron-Distal	3.39927	400.00000	HepG2	DKC1
chr11	2985071	2985082	-	intron-Distal	3.34929	400.00000	HepG2	DKC1
chr11	3011047	3011080	-	intron-Distal	5.24960	60.58231	K562	EXOSC5
chr11	2966218	2966282	-	3'-UTR,intron-Distal,intron-Proximal	3.51167	57.59271	K562	UPF1
chr11	3011371	3011431	-	intron-Distal	4.66579	53.76173	K562	EXOSC5
chr11	3011023	3011047	-	intron-Distal	5.55093	46.33465	K562	EXOSC5
chr11	3009537	3009583	-	intron-Distal	6.42655	40.39030	K562	EXOSC5
chr11	2991075	2991130	-	CDS,intron-Distal,intron-Proximal	4.37553	39.14800	K562	ZNF622
chr11	3010457	3010517	-	5'-UTR,intron-Distal,intron-Proximal	4.07874	38.09516	K562	EXOSC5
chr11	3010657	3010703	-	intron-Distal	4.65992	37.18685	K562	EXOSC5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 357 entries

eCLIP assay for NAP1L4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NAP1L4 is not available on ENCORE database.
82 RBPs can affect the levels of NAP1L4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NAP1L4 is not available on ENCORE database.

82 RBPs can affect the gene expression of NAP1L4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NAP1L4	ENSG00000205531.8	2313.08430	3803.07000	-0.71730	26.36780	24.26120	K562	MTPAP
NAP1L4	ENSG00000205531.8	1224.96960	2488.58090	-1.02260	20.33540	18.70510	HepG2	TARDBP
NAP1L4	ENSG00000205531.8	1383.82430	2397.31490	-0.79280	17.26560	15.63900	HepG2	CALR
NAP1L4	ENSG00000205531.8	1798.61600	3403.54860	-0.92020	12.81460	11.46580	HepG2	EIF4A3
NAP1L4	ENSG00000205531.8	1780.62180	2586.60060	-0.53870	12.79640	10.94380	HepG2	HDGF
NAP1L4	ENSG00000205531.8	2178.36030	3535.55470	-0.69870	8.58910	7.50500	HepG2	NCBP2
NAP1L4	ENSG00000205531.8	2606.87630	3394.81630	-0.38100	7.56110	6.66190	HepG2	SF3B4
NAP1L4	ENSG00000205531.8	1995.55050	3148.87380	-0.65800	7.84140	6.64160	HepG2	PABPC4
NAP1L4	ENSG00000205531.8	2485.49160	3429.62220	-0.46450	7.45780	6.37800	HepG2	PUM2
NAP1L4	ENSG00000205531.8	1443.04420	1882.44480	-0.38350	7.35790	6.36430	HepG2	DNAJC2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 92 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NAP1L4 is not available on ENCORE database.

24 RBPs can affect the splicing of NAP1L4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	NAP1L4	ENSG00000205531.8	chr11	-	2970456	2970494	2966664	2966876	2972488	2972545	0.38000	0.00000	included	K562	SRSF1
SE	NAP1L4	ENSG00000205531.8	chr11	-	2970456	2970494	2966664	2966876	2972488	2972545	0.19400	0.00018	included	HepG2	U2AF1
SE	NAP1L4	ENSG00000205531.8	chr11	-	2975530	2975640	2973009	2973039	2975756	2975876	0.12500	0.00000	included	K562	AQR
SE	NAP1L4	ENSG00000205531.8	chr11	-	2970456	2970494	2966664	2966897	2972488	2972545	-0.14500	0.00000	excluded	K562	AQR
SE	NAP1L4	ENSG00000205531.8	chr11	-	2970456	2970494	2966664	2966876	2972488	2972545	-0.20100	0.00007	excluded	K562	HNRNPA1
SE	NAP1L4	ENSG00000205531.8	chr11	-	2975530	2975640	2973009	2973039	2975756	2975876	0.07900	0.00006	included	K562	PUS1
SE	NAP1L4	ENSG00000205531.8	chr11	-	2970456	2970494	2966664	2966876	2972488	2972545	-0.16600	0.00109	excluded	K562	NSUN2
SE	NAP1L4	ENSG00000205531.8	chr11	-	2978741	2978802	2976973	2976996	2979628	2979774	0.11600	0.00001	included	K562	KHSRP
SE	NAP1L4	ENSG00000205531.8	chr11	-	2970456	2970494	2966664	2966876	2972488	2972545	0.22700	0.00007	included	K562	HNRNPM
SE	NAP1L4	ENSG00000205531.8	chr11	-	2970456	2970494	2966664	2966876	2972488	2972545	0.32000	0.00000	included	HepG2	SRSF1

Showing 1 to 10 of 39 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NAP1L4

General Information

Functions

Localization

Domains (AlphaFold: NAP1L4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NAP1L4 is not avaliable on ENCORE database.

64 proteins are bound to NAP1L4 RNA:

eCLIP assay for NAP1L4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NAP1L4 is not available on ENCORE database.

82 RBPs can affect the gene expression of NAP1L4 :

The Knockdown/knockout RNA-Seq assay for NAP1L4 is not available on ENCORE database.

24 RBPs can affect the splicing of NAP1L4 :

The Knockdown/knockout RNA-Seq assay for NAP1L4 is not avaliable on ENCORE database.