TIAF1

General Information

Gene Name : TIAF1
Gene ID : ENSG00000221995.5
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TIAF1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TIAF1	ENSG00000221995.5	0.61	0.81	0.71	ENCSR000AEF
HepG2	TIAF1	ENSG00000221995.5	0.99	1.00	0.99	ENCSR985KAT
K562	TIAF1	ENSG00000221995.5	0.40	0.38	0.39	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TIAF1 is not avaliable on ENCORE database.

Proteins bound to RNA

TIAF1 RNA is bound by 25 proteins.

CanvasJS.com

eCLIP assay for TIAF1 is not avaliable on ENCORE database.

25 proteins are bound to TIAF1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	27409472	27409572	-	intron-Distal,intron-Proximal	4.99610	42.89350	HepG2	RBFOX2
chr17	27412471	27412571	-	intron-Distal,intron-Proximal	5.37983	42.87742	HepG2	RBFOX2
chr17	27412397	27412471	-	intron-Distal	5.07685	39.14549	HepG2	RBFOX2
chr17	27409280	27409381	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.58836	19.90075	HepG2	PRPF8
chr17	27412393	27412484	-	intron-Distal	4.59111	16.99383	HepG2	QKI
chr17	27412348	27412397	-	intron-Distal	3.81794	16.84628	HepG2	RBFOX2
chr17	27413952	27414032	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.09925	16.66400	HepG2	PPIG
chr17	27414005	27414116	-	3'-UTR,5'-UTR,CDS,intron-Distal	5.23889	15.88353	HepG2	PABPN1
chr17	27400929	27401039	-	3'-UTR,CDS,intron-Distal	5.22888	15.83369	K562	UPF1
chr17	27409573	27409603	-	intron-Distal	4.20894	15.71971	HepG2	RBFOX2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 119 entries

eCLIP assay for TIAF1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TIAF1 is not available on ENCORE database.
67 RBPs can affect the levels of TIAF1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TIAF1 is not available on ENCORE database.

67 RBPs can affect the gene expression of TIAF1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TIAF1	ENSG00000221995.4	1005.67100	394.64600	1.34940	21.09720	19.29740	HepG2	U2AF1
TIAF1	ENSG00000221995.4	1448.56380	204.06380	2.82740	18.02950	15.37300	HepG2	U2AF2
TIAF1	ENSG00000221995.4	593.81980	245.00380	1.27710	15.99250	13.59350	K562	EFTUD2
TIAF1	ENSG00000221995.4	637.95770	382.94700	0.73620	11.08080	10.16610	HepG2	ZNF622
TIAF1	ENSG00000221995.4	243.17880	468.15060	-0.94500	10.50100	9.71110	HepG2	SRSF1
TIAF1	ENSG00000221995.4	693.98740	338.68770	1.03490	10.50060	9.30960	HepG2	GPKOW
TIAF1	ENSG00000221995.4	517.93530	277.90730	0.89810	10.36950	9.14180	K562	PTBP1
TIAF1	ENSG00000221995.4	221.87300	473.96070	-1.09500	8.75980	7.87440	HepG2	AKAP1
TIAF1	ENSG00000221995.4	521.12530	315.11680	0.72560	8.92930	7.86510	HepG2	CKAP4
TIAF1	ENSG00000221995.4	754.05000	392.62050	0.94140	8.40580	7.17890	HepG2	SF3A3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 75 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TIAF1 is not available on ENCORE database.

27 RBPs can affect the splicing of TIAF1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	TIAF1	ENSG00000221995.4	chr17	-	27412621	27412666			27409333	27409456	27413455	27413595	-0.54100	0.00002	excluded	HepG2	HNRNPM
SE	TIAF1	ENSG00000221995.4	chr17	-	27412621	27412666			27409333	27409456	27413455	27413595	0.32000	0.00010	included	HepG2	HNRNPK
SE	TIAF1	ENSG00000221995.4	chr17	-	27412621	27412666			27409333	27409456	27413455	27413595	-0.31000	0.00000	excluded	HepG2	QKI
SE	TIAF1	ENSG00000221995.4	chr17	-	27412621	27412666			27409333	27409456	27413455	27413595	-0.24600	0.00003	excluded	HepG2	DDX3X
SE	TIAF1	ENSG00000221995.4	chr17	-	27412621	27412666			27409333	27409456	27413455	27413595	-0.22700	0.00083	excluded	HepG2	NCBP2
SE	TIAF1	ENSG00000221995.4	chr17	-	27412621	27412666			27409333	27409456	27413455	27413595	0.31400	0.00014	included	HepG2	EFTUD2
SE	TIAF1	ENSG00000221995.4	chr17	-	27412621	27412666			27409333	27409456	27413455	27413595	-0.50700	0.00000	excluded	HepG2	SSB
SE	TIAF1	ENSG00000221995.4	chr17	-	27412621	27412666			27409333	27409456	27413455	27413595	-0.60000	0.00000	excluded	HepG2	RBFOX2
MXE	TIAF1	ENSG00000221995.4	chr17	-	27412621	27412666	27413455	27413595	27409333	27409456	27413953	27414139	0.28900	0.00000	1included	HepG2	SFPQ
MXE	TIAF1	ENSG00000221995.4	chr17	-	27412621	27412666	27413455	27413595	27409333	27409456	27413953	27414139	0.32500	0.00005	1included	HepG2	U2AF2

Showing 1 to 10 of 31 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TIAF1

General Information

Functions

Localization

Domains (AlphaFold: TIAF1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TIAF1 is not avaliable on ENCORE database.

25 proteins are bound to TIAF1 RNA:

eCLIP assay for TIAF1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TIAF1 is not available on ENCORE database.

67 RBPs can affect the gene expression of TIAF1 :

The Knockdown/knockout RNA-Seq assay for TIAF1 is not available on ENCORE database.

27 RBPs can affect the splicing of TIAF1 :

The Knockdown/knockout RNA-Seq assay for TIAF1 is not avaliable on ENCORE database.