ITGA1

General Information

Gene Name       : ITGA1
Gene ID             : ENSG00000213949.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ITGA1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ITGA1ENSG00000213949.80.050.190.12ENCSR000AEF
HepG2ITGA1ENSG00000213949.811.0219.1015.06ENCSR985KAT
K562ITGA1ENSG00000213949.80.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ITGA1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ITGA1 RNA is bound by 15 proteins.  







eCLIP assay for ITGA1 is not avaliable on ENCORE database.





15 proteins are bound to ITGA1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr55224981552249892+3'-UTR4.174243.52163HepG2IGF2BP1
chr55224831152248368+3'-UTR3.263853.94979HepG2BCLAF1
chr55225007952250153+3'-UTR3.688323.13437HepG2IGF2BP1
chr55208403052084092+5'-UTR3.758465.14253HepG2GRWD1
chr55208400752084250+5'-UTR,CDS,intron-Proximal3.628806.40776HepG2ZNF800
chr55208414752084242+5'-UTR,CDS3.9206416.71048HepG2DDX3X
chr55208403352084147+5'-UTR3.3619715.27515HepG2DDX3X
chr55218950352189559+CDS,intron-Proximal3.898113.60441HepG2GRWD1
chr55216159352161653+CDS,intron-Proximal5.343246.13315HepG2BCLAF1
chr55223323052233344+CDS,intron-Proximal4.109797.23562HepG2BCLAF1
chr55217777952177852+CDS3.533786.20035HepG2BCLAF1
chr55216080352160870+CDS,intron-Proximal3.9285711.29515HepG2BCLAF1
chr55216154952161593+CDS3.372824.34695HepG2BCLAF1
chr55222548352225529+CDS3.530343.68471HepG2BCLAF1
chr55220599052206065+CDS,intron-Proximal4.617228.85766HepG2BCLAF1
chr55216080252160916+CDS,intron-Proximal3.298725.09999HepG2ZNF800
chr55224318052243268+CDS5.081196.17882HepG2SND1
chr55219327652193321+CDS,intron-Proximal4.359093.45799HepG2U2AF2
chr55220160452201683+CDS3.158405.69345HepG2BCLAF1
chr55215728152157394+CDS,intron-Proximal4.5303412.43877HepG2BCLAF1
chr55218955952189683+CDS,intron-Proximal3.455637.10608HepG2GRWD1
chr55224078252240847+CDS3.498594.74886HepG2BCLAF1
chr55218369852183806+CDS,intron-Proximal4.0714310.35753HepG2BCLAF1
chr55218957552189693+CDS,intron-Proximal3.9577814.30125HepG2BCLAF1
chr55216064952160687+CDS,intron-Proximal3.149385.00751HepG2BCLAF1
chr55218370752183802+CDS,intron-Proximal3.487204.71371HepG2GRWD1
chr55218950552189575+CDS,intron-Proximal3.386068.43208HepG2BCLAF1
chr55221459452214659+CDS4.194755.36555HepG2BCLAF1
chr55222975052229822+CDS4.009334.93978HepG2BCLAF1
chr55214529152145320+CDS,intron-Proximal3.250403.17233HepG2BCLAF1
chr55218364552183698+CDS,intron-Proximal3.422594.74886HepG2BCLAF1
chr55222336752223423+CDS,intron-Proximal4.186004.07325HepG2SF3B4
chr55221465952214729+CDS,intron-Proximal4.119513.68471HepG2BCLAF1
chr55209623452096290+CDS,intron-Distal3.698833.12746HepG2GRWD1
chr55209776052097850+3'-UTR,intron-Distal3.767033.04123K562LIN28B
chr55219020752190279+intron-Distal3.446914.85249HepG2U2AF2
chr55210041352100475+intron-Distal5.0710713.73149HepG2QKI
chr55210047552100540+intron-Distal5.232046.93116HepG2QKI
chr55219009152190166+intron-Distal3.055254.30158HepG2U2AF2
chr55223944352239494+intron-Distal3.042203.63437HepG2HNRNPM
chr55209755652097756+3'-UTR,CDS,intron-Distal3.656345.15500HepG2BCLAF1
chr55209736752097454+CDS,intron-Distal4.023383.34184HepG2GRWD1
chr55215342852153514+intron-Distal4.072923.41738HepG2PTBP1
chr55210968852109833+intron-Distal6.6546722.24632HepG2QKI
chr55223936052239419+intron-Distal4.850895.02084HepG2HNRNPM
chr55209593552096059+3'-UTR,intron-Distal4.1183611.81272K562DDX3X
chr55219315852193206+intron-Distal,intron-Proximal4.498593.89826HepG2BCLAF1
chr55209594252096036+3'-UTR,intron-Distal3.144663.52645HepG2NCBP2
chr55209789452098016+3'-UTR,intron-Distal3.586914.99588HepG2CSTF2
chr55208426252084328+intron-Proximal3.323845.26410HepG2TIAL1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ITGA1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ITGA1 is not available on ENCORE database.

  • 160 RBPs can affect the levels of ITGA1.  








The Knockdown/knockout RNA-Seq assay for ITGA1 is not available on ENCORE database.





160 RBPs can affect the gene expression of ITGA1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ITGA1ENSG00000213949.42757.555001684.011900.711407.058304.37910HepG2AARS
ITGA1ENSG00000213949.47486.299002154.242801.7970076.7912073.12850HepG2AATF
ITGA1ENSG00000213949.4821.795502354.52340-1.5186032.1326029.67950HepG2ABCF1
ITGA1ENSG00000213949.43630.005202170.602700.7418022.4505021.09510HepG2ACO1
ITGA1ENSG00000213949.41322.605902551.12700-0.9478016.8018014.68400HepG2ADAR
ITGA1ENSG00000213949.418419.262002915.133202.6595082.5088080.28420HepG2AKAP1
ITGA1ENSG00000213949.410851.302604195.167701.3710020.5540018.06210HepG2AKAP8
ITGA1ENSG00000213949.45390.054902411.947601.1600024.9845022.95800HepG2ASCC1
ITGA1ENSG00000213949.43206.114002124.935200.593309.133106.76740HepG2ATP5C1
ITGA1ENSG00000213949.410179.174402407.661402.07980216.98160212.88550HepG2AUH
ITGA1ENSG00000213949.41095.754401718.12740-0.648902.923601.95690HepG2BCCIP
ITGA1ENSG00000213949.45178.149801493.150201.7940052.7520049.74460HepG2BCLAF1
ITGA1ENSG00000213949.44013.075201559.380301.3636040.4263038.63720HepG2BOP1
ITGA1ENSG00000213949.44515.053501764.175301.3556045.2435041.40080HepG2BUD13
ITGA1ENSG00000213949.410180.476402984.394401.7702056.0120053.43890HepG2CALR
ITGA1ENSG00000213949.42913.233404671.89700-0.681405.942504.48350HepG2CCAR1
ITGA1ENSG00000213949.41413.976502291.54220-0.696608.954407.63000HepG2CIRBP
ITGA1ENSG00000213949.46996.467601431.564802.28890104.82380101.70280HepG2CPSF6
ITGA1ENSG00000213949.45086.615001939.145401.3912049.9803046.60710HepG2CPSF7
ITGA1ENSG00000213949.4441.116901061.60710-1.267008.662306.93630HepG2CSTF2
ITGA1ENSG00000213949.43602.497402205.389200.707906.693804.28430HepG2CSTF2T
ITGA1ENSG00000213949.413561.474302940.246002.20540220.01920216.54500HepG2CELF1
ITGA1ENSG00000213949.44009.208603161.709200.342508.200407.02730HepG2DAZAP1
ITGA1ENSG00000213949.4882.054302007.65200-1.1866021.1335019.34600HepG2DDX19B
ITGA1ENSG00000213949.45699.364202619.813301.1212020.8866018.29460HepG2DDX1
ITGA1ENSG00000213949.4948.806902377.49880-1.3253035.4141033.40310HepG2DDX21
ITGA1ENSG00000213949.41780.590902325.97220-0.385504.480703.30750HepG2DDX24
ITGA1ENSG00000213949.42021.184601280.074200.658908.698406.44620HepG2DDX28
ITGA1ENSG00000213949.45116.008202792.304400.8735014.0921012.78790HepG2DDX3X
ITGA1ENSG00000213949.413668.014807921.833100.7868016.4676013.81300HepG2DDX47
ITGA1ENSG00000213949.42589.984702023.051800.356303.676002.12150HepG2DDX52
ITGA1ENSG00000213949.47024.933001689.155402.0561023.2849021.38660HepG2DDX55
ITGA1ENSG00000213949.415177.971201625.657403.2228029.2228026.52020HepG2DDX59
ITGA1ENSG00000213949.422315.488102399.053803.21740142.21340139.01290HepG2DDX6
ITGA1ENSG00000213949.43112.267002477.677200.328903.125602.08610HepG2DHX30
ITGA1ENSG00000213949.41480.203502076.76610-0.488506.493705.53880HepG2DKC1
ITGA1ENSG00000213949.43344.502002568.889900.380506.242705.22020HepG2DNAJC21
ITGA1ENSG00000213949.44013.896902546.140500.6566027.9690026.10140HepG2DNAJC2
ITGA1ENSG00000213949.41379.095302414.01770-0.807707.097705.69240HepG2EEF2
ITGA1ENSG00000213949.42747.392802012.699400.448804.578503.14950HepG2EFTUD2
ITGA1ENSG00000213949.48513.631202188.827401.9595031.9862028.66400HepG2AGO1
ITGA1ENSG00000213949.48150.388402305.865201.8215058.7395056.37740HepG2EIF2S1
ITGA1ENSG00000213949.42600.824401786.213300.542008.300506.41360HepG2EIF2S2
ITGA1ENSG00000213949.44112.909301959.798201.0694012.8705011.07780HepG2EIF3D
ITGA1ENSG00000213949.41180.062202244.76790-0.9277021.4106019.02260HepG2EIF3G
ITGA1ENSG00000213949.41249.046402548.05690-1.0286015.1850013.70440HepG2EIF4A3
ITGA1ENSG00000213949.45959.736702481.263501.2641012.0448010.66000HepG2EIF4B
ITGA1ENSG00000213949.44273.469403119.028200.4542010.415708.98940HepG2EIF4G1
ITGA1ENSG00000213949.45374.985302987.863900.8470016.0767014.23110HepG2EIF4G2
ITGA1ENSG00000213949.41407.102802039.70420-0.535606.013404.46560HepG2ESF1
ITGA1ENSG00000213949.43336.763902121.366800.6534010.945709.31540HepG2EWSR1
ITGA1ENSG00000213949.43545.970201751.268701.0177027.6396024.36930HepG2FAM120A
ITGA1ENSG00000213949.44642.486602265.360301.0351013.2740011.09890HepG2FASTKD2
ITGA1ENSG00000213949.46424.245002377.532301.4340033.5711031.46750HepG2FIP1L1
ITGA1ENSG00000213949.42243.847701406.116800.674208.620006.59790HepG2FKBP4
ITGA1ENSG00000213949.43276.397901434.083601.191904.936103.58280HepG2FTO
ITGA1ENSG00000213949.42749.686301472.549600.9009019.0441017.06840HepG2FUBP3
ITGA1ENSG00000213949.47748.687503020.486201.3591021.1743018.62340HepG2FUS
ITGA1ENSG00000213949.41866.393402571.47320-0.462304.277803.43100HepG2FXR1
ITGA1ENSG00000213949.46282.494902385.107801.3972032.1279029.93800HepG2G3BP1
ITGA1ENSG00000213949.41801.062802532.50360-0.491704.937903.73800HepG2G3BP2
ITGA1ENSG00000213949.4967.283701744.99280-0.851205.943104.62690HepG2GEMIN5
ITGA1ENSG00000213949.45194.715502574.314901.012808.591906.79420HepG2GNB2L1
ITGA1ENSG00000213949.42094.639201622.704600.368202.555901.93820HepG2GPKOW
ITGA1ENSG00000213949.47275.989202845.565801.3543018.8386015.37490HepG2GTF2F1
ITGA1ENSG00000213949.47493.968502072.509301.8543049.1163045.89000HepG2HDGF
ITGA1ENSG00000213949.46682.991902892.862901.2079012.705609.69910HepG2HLTF
ITGA1ENSG00000213949.4563.813002593.49990-2.2016087.7409085.21220HepG2HNRNPA1
ITGA1ENSG00000213949.410061.765502905.593801.7919071.7585068.28080HepG2HNRNPA2B1
ITGA1ENSG00000213949.42331.174601728.312700.431608.113706.96540HepG2HNRNPF
ITGA1ENSG00000213949.45724.151402415.863001.2444034.0019031.83990HepG2HNRNPK
ITGA1ENSG00000213949.45969.564102880.142701.0514078.9678076.24960HepG2HNRNPL
ITGA1ENSG00000213949.43858.125001548.584701.3168032.4055030.62780HepG2HNRNPLL
ITGA1ENSG00000213949.41004.339201640.47490-0.7079010.995109.32900HepG2HNRNPM
ITGA1ENSG00000213949.44102.721702424.299400.7589011.231909.97030HepG2IGF2BP2
ITGA1ENSG00000213949.45499.743402275.545501.273102.855401.85820HepG2IGF2BP3
ITGA1ENSG00000213949.43407.196402927.218000.219003.779302.93530HepG2ILF2
ITGA1ENSG00000213949.44266.697305975.04990-0.485803.908502.44550HepG2KHDRBS1
ITGA1ENSG00000213949.43588.807802438.637600.557304.613303.28750HepG2KHSRP
ITGA1ENSG00000213949.44313.405602278.558800.9206015.7465012.42710HepG2CCAR2
ITGA1ENSG00000213949.43085.610301984.413400.6367019.7563017.36880HepG2KIF1C
ITGA1ENSG00000213949.49154.875104566.036901.003506.696204.77630HepG2KRR1
ITGA1ENSG00000213949.43835.849602522.147000.604809.169307.22070HepG2LARP7
ITGA1ENSG00000213949.41450.863802648.12120-0.8681016.0749013.41100HepG2LIN28B
ITGA1ENSG00000213949.41540.731402586.67480-0.747508.743307.67240HepG2MATR3
ITGA1ENSG00000213949.46713.106702051.214501.7104031.7304028.62260HepG2METAP2
ITGA1ENSG00000213949.44801.981401924.345701.3192045.5867043.03430HepG2MSI2
ITGA1ENSG00000213949.43561.287801579.542301.1728012.2024010.15780HepG2MTPAP
ITGA1ENSG00000213949.43555.369801615.850001.1376030.4027026.82040HepG2NAA15
ITGA1ENSG00000213949.44272.933502647.527300.690508.651007.56430HepG2NCBP2
ITGA1ENSG00000213949.48372.075703135.132401.4170042.4624039.87970HepG2NOL12
ITGA1ENSG00000213949.410155.582805731.802500.825106.421305.03320HepG2PABPC1
ITGA1ENSG00000213949.46235.788802357.437001.4033034.3035031.83450HepG2PABPC4
ITGA1ENSG00000213949.48991.068202836.576201.66420141.40300137.81570HepG2PARN
ITGA1ENSG00000213949.45803.527602348.726101.3050085.7254083.24290HepG2PCBP1
ITGA1ENSG00000213949.42033.524002555.97630-0.329904.435203.52230HepG2PPIL4
ITGA1ENSG00000213949.41686.979303006.20390-0.833505.626803.94080HepG2PRPF6
ITGA1ENSG00000213949.4762.591201303.70110-0.773604.068303.11200HepG2PRPF8
ITGA1ENSG00000213949.47580.412402390.046501.66510137.34940135.00530HepG2PTBP1
ITGA1ENSG00000213949.43554.845502992.696300.248202.044601.52030HepG2PUF60
ITGA1ENSG00000213949.46355.963203176.806801.0004075.0664072.87770HepG2PUM1
ITGA1ENSG00000213949.413326.162802588.202602.36410205.64230202.10810HepG2QKI
ITGA1ENSG00000213949.48483.690502759.986101.6199021.7528019.95350HepG2RAVER1
ITGA1ENSG00000213949.414271.143802965.047102.2669048.3531045.70740HepG2RBM15
ITGA1ENSG00000213949.47657.824702349.064801.7047081.2521078.11600HepG2RBM25
ITGA1ENSG00000213949.4831.367302469.68220-1.5708035.6602032.37130HepG2RCC2
ITGA1ENSG00000213949.41846.329602659.78440-0.5266010.9519010.00950HepG2NELFE
ITGA1ENSG00000213949.41698.164402477.42340-0.544908.717907.71520HepG2RECQL
ITGA1ENSG00000213949.43784.030302710.233000.481402.890301.92710HepG2RPS10
ITGA1ENSG00000213949.4757.147901906.82740-1.3325016.1448014.83140HepG2RPS19
ITGA1ENSG00000213949.41465.014602804.87370-0.9370017.3711015.48790HepG2RPS2
ITGA1ENSG00000213949.42250.298106296.74930-1.4845026.7689024.39830HepG2RPS3A
ITGA1ENSG00000213949.44060.878201289.694501.6547041.8043039.49600HepG2RRP9
ITGA1ENSG00000213949.44706.341602552.042400.8829046.8885044.73910HepG2SAFB2
ITGA1ENSG00000213949.42756.054201914.023900.525905.646804.31720HepG2SERBP1
ITGA1ENSG00000213949.43171.181101532.743501.0488022.9691021.16740HepG2SF3B1
ITGA1ENSG00000213949.46093.132602488.114101.2920085.3404082.96660HepG2SF3B4
ITGA1ENSG00000213949.43218.523002869.380300.165602.095301.46980HepG2SLBP
ITGA1ENSG00000213949.42648.638702976.13420-0.168202.396601.79260HepG2SMN1
ITGA1ENSG00000213949.46912.930202811.452501.2979020.3346017.78650HepG2SMNDC1
ITGA1ENSG00000213949.46963.531402356.203301.563307.735905.32120HepG2SNRNP200
ITGA1ENSG00000213949.412186.792501705.463602.8370074.4060070.93290HepG2SNRNP70
ITGA1ENSG00000213949.48458.322502609.545001.69650176.76700174.39020HepG2SRFBP1
ITGA1ENSG00000213949.42469.255001609.055500.617807.646405.14030HepG2SRP68
ITGA1ENSG00000213949.41623.254102597.14740-0.6780015.1597014.24300HepG2SRSF1
ITGA1ENSG00000213949.42703.451901649.377900.712807.277805.59120HepG2SRSF3
ITGA1ENSG00000213949.47700.372902954.764801.3818099.5623096.62370HepG2SRSF5
ITGA1ENSG00000213949.43338.294801697.996800.9752040.5972038.58580HepG2SRSF7
ITGA1ENSG00000213949.411662.729102112.999602.4644099999.9999999999.99999HepG2SRSF9
ITGA1ENSG00000213949.41376.794902265.76370-0.7187020.7566019.63500HepG2SSB
ITGA1ENSG00000213949.47745.443304550.732800.767104.148402.60060HepG2SSRP1
ITGA1ENSG00000213949.44025.546601588.149601.3417022.8720020.05120HepG2STAU1
ITGA1ENSG00000213949.49107.782702579.136601.8201035.1468031.63140HepG2SUB1
ITGA1ENSG00000213949.45827.792003360.456000.7942041.8141039.91120HepG2SUCLG1
ITGA1ENSG00000213949.48553.141604610.315700.891504.520102.80490HepG2SUGP2
ITGA1ENSG00000213949.44782.917701605.532301.5747062.8029059.14080HepG2SUPT6H
ITGA1ENSG00000213949.42944.654602334.681100.334803.724403.09010HepG2TAF15
ITGA1ENSG00000213949.43615.434501509.617701.2599032.9727031.00330HepG2TARDBP
ITGA1ENSG00000213949.41735.225504469.98540-1.365103.508802.31270HepG2TBRG4
ITGA1ENSG00000213949.44168.895001127.312201.8867057.1292053.96070HepG2TFIP11
ITGA1ENSG00000213949.45582.642402144.974101.3799056.0974052.68700HepG2TIA1
ITGA1ENSG00000213949.41073.998002784.64100-1.3745050.5530048.91240HepG2TIAL1
ITGA1ENSG00000213949.43934.352402770.502900.505903.403101.78160HepG2TRA2A
ITGA1ENSG00000213949.48023.540702809.446501.5139093.5163090.88410HepG2TRIM56
ITGA1ENSG00000213949.42808.925902033.896400.465704.885904.06440HepG2U2AF1
ITGA1ENSG00000213949.45872.381202747.440901.095803.866602.68920HepG2U2AF2
ITGA1ENSG00000213949.410972.220003094.526901.8260028.3223025.79510HepG2UBE2L3
ITGA1ENSG00000213949.46731.506202107.013301.67560154.22480150.83940HepG2UPF1
ITGA1ENSG00000213949.4797.326001540.43860-0.950104.600503.28700HepG2UPF2
ITGA1ENSG00000213949.43801.269402165.723100.8115026.2396023.56190HepG2UTP18
ITGA1ENSG00000213949.48498.363402713.165701.6471030.2716026.86430HepG2XRCC5
ITGA1ENSG00000213949.4636.518201655.46110-1.379009.309708.00250HepG2XRN2
ITGA1ENSG00000213949.41140.270501585.79580-0.475809.252508.14410HepG2ZC3H8
ITGA1ENSG00000213949.49924.508702317.312802.09840224.09790221.46040HepG2ZNF622
ITGA1ENSG00000213949.438.470302.969203.695506.571205.72950K562AQR
ITGA1ENSG00000213949.41.4382015.41930-3.422402.781301.96920K562MTPAP
ITGA1ENSG00000213949.43.2207017.12680-2.410802.251701.57230K562NSUN2
ITGA1ENSG00000213949.43.3016016.90780-2.356402.251201.51010K562SF3A3
ITGA1ENSG00000213949.41.9054017.32310-3.184503.129902.14100K562SRPK2
ITGA1ENSG00000213949.42.5629018.16030-2.824902.922602.18430K562UPF1
ITGA1ENSG00000213949.42.5731015.53850-2.594302.327701.52480K562WDR3
ITGA1ENSG00000213949.40.9970016.16310-4.019003.777902.79910K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ITGA1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ITGA1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ITGA1 is not avaliable on ENCORE database.