YLPM1

General Information

Gene Name       : YLPM1
Gene ID             : ENSG00000119596.17
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: YLPM1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878YLPM1ENSG00000119596.1732.5632.8032.68ENCSR000AEF
HepG2YLPM1ENSG00000119596.1722.1629.3025.73ENCSR985KAT
K562YLPM1ENSG00000119596.1721.5922.0021.80ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for YLPM1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • YLPM1 RNA is bound by 35 proteins.  







eCLIP assay for YLPM1 is not avaliable on ENCORE database.





35 proteins are bound to YLPM1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr147529599975296052+3'-UTR,CDS,intron-Distal,intron-Proximal3.741288.10680HepG2GRWD1
chr147530214075302221+3'-UTR,intron-Distal,intron-Proximal4.160703.49003K562PRPF8
chr147529594175296050+3'-UTR,CDS,intron-Distal,intron-Proximal3.781687.59704HepG2FXR2
chr147530202875302094+3'-UTR,CDS,intron-Distal3.384415.86107HepG2PPIG
chr147530200875302098+3'-UTR,CDS,intron-Distal4.182777.27605HepG2GRWD1
chr147530266475302721+3'-UTR,intron-Distal3.731373.00221HepG2U2AF1
chr147530279775302853+3'-UTR,intron-Distal3.950973.22073HepG2KHSRP
chr147530202475302075+3'-UTR,CDS,intron-Distal5.4913410.24913HepG2BCLAF1
chr147530200575302100+3'-UTR,CDS,intron-Distal3.178673.22540HepG2G3BP1
chr147530243475302521+3'-UTR,intron-Distal,intron-Proximal4.262283.31322HepG2SF3B4
chr147530245775302521+3'-UTR,intron-Distal,intron-Proximal3.428625.97243HepG2U2AF2
chr147530196275302084+3'-UTR,CDS,intron-Distal,intron-Proximal3.896367.25055HepG2FXR2
chr147528786075287941+3'-UTR,CDS,intron-Distal,intron-Proximal3.656794.45817HepG2HLTF
chr147529592275296036+3'-UTR,CDS,intron-Distal4.851244.03179K562ZNF800
chr147528776975287954+3'-UTR,CDS,intron-Distal,intron-Proximal3.314094.76953K562DDX24
chr147528787275287940+3'-UTR,CDS,intron-Proximal4.627859.47159HepG2BCLAF1
chr147530265775302737+3'-UTR,intron-Distal4.195094.15622HepG2TIAL1
chr147523012275230229+5'-UTR,CDS4.605433.86664K562DDX3X
chr147523008575230159+5'-UTR4.292474.17587HepG2DDX3X
chr147528328575283341+CDS,intron-Distal4.301784.21087HepG2GRWD1
chr147528497075285018+CDS,intron-Proximal3.752115.14848K562ZNF622
chr147526520875265332+CDS,intron-Distal3.488815.27838HepG2EIF3H
chr147523079475230929+CDS7.0162864.54519HepG2PCBP2
chr147524858275248675+CDS,intron-Proximal3.928769.55443HepG2IGF2BP1
chr147526487875264924+CDS,intron-Distal4.683365.78736K562ZNF622
chr147527700275277059+CDS4.176665.79432HepG2BCLAF1
chr147524889675248997+CDS3.145675.68263HepG2EIF3H
chr147528498375285017+CDS3.695874.68902HepG2PPIG
chr147526597975266016+CDS,intron-Distal3.720584.40383K562UCHL5
chr147527944075279485+CDS3.581603.66187K562ZNF622
chr147524896875249029+CDS,intron-Proximal3.113875.33987HepG2GRWD1
chr147528775775287855+CDS,intron-Proximal5.8545013.75753K562ZNF622
chr147528776675287840+CDS4.3018115.55920HepG2BCLAF1
chr147527619575276251+CDS4.814926.17200HepG2PCBP2
chr147527945075279484+CDS3.450304.06757K562UCHL5
chr147528390175283945+CDS5.310058.75808HepG2BCLAF1
chr147524514775245206+CDS,intron-Proximal3.284413.01994K562BUD13
chr147526587275265967+CDS,intron-Distal4.4732512.69640K562UCHL5
chr147524877375248836+CDS3.211216.09932K562RBM15
chr147526540475265471+CDS,intron-Distal3.171313.34231K562RBM15
chr147526494975264980+CDS,intron-Distal4.548044.43680K562ZNF622
chr147526463475264694+CDS,intron-Distal3.105654.48744HepG2BCLAF1
chr147523068275230768+CDS5.0373133.07450HepG2PCBP2
chr147528329475283347+CDS,intron-Distal4.6508410.19430HepG2BCLAF1
chr147526522575265290+CDS,intron-Distal3.356783.62547K562MTPAP
chr147526631675266344+CDS,intron-Distal3.255563.31745K562ZNF622
chr147523081775230909+CDS4.737505.74598K562PCBP1
chr147528389675283936+CDS,intron-Proximal3.128074.59873K562UCHL5
chr147528327475283363+CDS,intron-Distal4.032084.06501K562GRWD1
chr147526520575265336+CDS,intron-Distal4.2222616.40617K562UCHL5
chr147526529175265384+CDS,intron-Distal4.711215.17013K562RBM15
chr147526525075265285+CDS,intron-Distal3.351883.66187K562ZNF622
chr147528779375287847+CDS,intron-Proximal4.182498.28719HepG2BUD13
chr147526584775265968+CDS,intron-Distal4.3674315.91092HepG2BCLAF1
chr147526596875266031+CDS,intron-Distal4.533788.47938HepG2BCLAF1
chr147524861275248718+CDS,intron-Proximal3.904457.63000K562RBM15
chr147528292975283014+CDS,intron-Proximal5.044946.35567HepG2PRPF8
chr147524725175247284+CDS3.353485.15500HepG2BCLAF1
chr147523062475230682+CDS4.3065611.53546HepG2PCBP2
chr147523076475230930+CDS4.2767913.15302K562HNRNPK
chr147527944875279483+CDS3.469145.76104HepG2BCLAF1
chr147529092375291026+CDS,intron-Distal,intron-Proximal3.020055.30786HepG2U2AF2
chr147528776475287842+CDS,intron-Proximal3.570596.59473HepG2GRWD1
chr147527669175276705+CDS3.859823.68471HepG2BCLAF1
chr147524810275248211+CDS,intron-Distal4.4500812.72422K562ZNF622
chr147528496775285018+CDS,intron-Proximal4.580314.91614HepG2GRWD1
chr147523061575230721+CDS3.048475.26123HepG2HNRNPK
chr147524884875248945+CDS3.432433.36518K562IGF2BP1
chr147528777475287821+CDS3.631104.49016HepG2FXR2
chr147526525675265320+CDS,intron-Distal3.206005.01906K562XRCC6
chr147526547775265568+CDS,intron-Distal4.442658.42950HepG2FXR2
chr147528373975283760+CDS3.430563.28366HepG2BCLAF1
chr147527663875276691+CDS3.264125.00751HepG2BCLAF1
chr147526519375265311+CDS,intron-Distal3.5106014.72409HepG2BCLAF1
chr147528363375283706+CDS,intron-Proximal4.0679210.54329K562UCHL5
chr147526539875265540+CDS,intron-Distal4.5627815.01054K562UCHL5
chr147526494875265007+CDS,intron-Distal5.254077.95223HepG2BCLAF1
chr147526927975269374+CDS4.6458611.26582K562ZNF622
chr147526542575265458+CDS,intron-Distal3.741304.93978HepG2BCLAF1
chr147526524375265345+CDS,intron-Distal4.032825.10133HepG2SLTM
chr147527944575279483+CDS3.430963.32039HepG2PPIG
chr147526525675265323+CDS,intron-Distal4.308184.54659HepG2G3BP1
chr147524888475248939+CDS3.671315.60474K562RBM15
chr147523070975230817+CDS5.885235.82558K562PCBP1
chr147526934875269381+CDS,intron-Proximal4.593084.91614HepG2GRWD1
chr147526542675265491+CDS,intron-Distal4.004536.13983HepG2HLTF
chr147524876375248851+CDS3.158336.19730K562ZNF622
chr147524531675245380+CDS4.677346.50203HepG2GRWD1
chr147529087275290976+CDS,intron-Distal,intron-Proximal3.562056.41380HepG2KHSRP
chr147523076875230794+CDS5.7353715.30086HepG2PCBP2
chr147526585075265964+CDS,intron-Distal3.859703.84033K562SAFB2
chr147523074375230959+CDS4.1443720.87341HepG2DDX59
chr147526519675265293+CDS,intron-Distal3.810156.05315HepG2FXR2
chr147528328075283327+CDS,intron-Distal4.790756.46917K562ZNF622
chr147524842675248483+CDS,intron-Distal4.432158.09313HepG2PCBP2
chr147526536175265398+CDS,intron-Distal4.854605.50697K562UCHL5
chr147527643375276453+CDS3.234403.94979HepG2BCLAF1
chr147524887375249032+CDS,intron-Proximal3.8870714.47436K562ZNF622
chr147526589275265965+CDS,intron-Distal3.303538.23585HepG2HLTF
chr147524830575248426+CDS,intron-Distal3.071146.48439HepG2PCBP2
chr147528364075283696+CDS5.585159.32793HepG2BCLAF1
chr147528425775284358+intron-Distal3.001243.46531K562KHSRP
chr147529229975292363+intron-Distal4.154684.00239HepG2KHSRP
chr147530373075303802+intron-Distal3.531414.97118HepG2U2AF2
chr147530319275303311+intron-Distal3.9279511.05206HepG2PTBP1
chr147529384275293918+intron-Distal4.166043.48768HepG2KHSRP
chr147530319975303317+intron-Distal3.938305.97243HepG2U2AF2
chr147530372475303824+intron-Distal4.539025.37430HepG2KHSRP
chr147529374375293825+intron-Distal4.882557.61259K562KHSRP
chr147529521175295287+intron-Distal3.562293.05863HepG2CSTF2
chr147525987575259918+intron-Distal3.846023.16028HepG2SUGP2
chr147530319175303301+intron-Distal4.312064.22415K562PTBP1
chr147526708475267146+intron-Distal3.717193.95921HepG2U2AF2
chr147525338375253497+intron-Distal3.563215.78005K562KHSRP
chr147526223975262346+intron-Distal4.340594.74221HepG2PTBP1
chr147529382575293927+intron-Distal4.742757.00634K562KHSRP
chr147526228975262364+intron-Distal3.639323.27276HepG2HNRNPL
chr147529112375291257+intron-Distal3.928626.89441K562KHSRP
chr147531769675317794+intron-Distal3.014204.14643HepG2KHSRP
chr147529863675298765+intron-Distal4.681717.47576K562KHSRP
chr147530721875307328+intron-Distal3.543494.82741HepG2KHSRP
chr147527107275271147+intron-Distal3.504564.51074HepG2RBFOX2
chr147526705975267137+intron-Distal4.709846.23638HepG2QKI
chr147529513675295211+intron-Distal4.736497.20825HepG2CSTF2
chr147526653675266596+intron-Distal4.450974.29306HepG2KHSRP
chr147525823075258310+intron-Distal4.648563.91475K562PTBP1
chr147530407175304119+intron-Distal3.157903.05068HepG2U2AF2
chr147529508475295157+intron-Distal4.034213.71677HepG2HNRNPL
chr147525349775253598+intron-Distal3.975333.90026K562KHSRP
chr147531688875316943+intron-Distal3.878373.40087HepG2RBFOX2
chr147524917275249287+intron-Distal3.870743.20552HepG2KHSRP
chr147524911975249300+intron-Distal,intron-Proximal3.024036.71298K562KHSRP
chr147525816575258308+intron-Distal4.492845.31323HepG2PTBP1
chr147526229075262365+intron-Distal3.906583.82544K562HNRNPL
chr147528442275284500+intron-Distal4.955416.39049HepG2U2AF2
chr147526032175260366+intron-Distal3.985843.79098HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for YLPM1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for YLPM1 is not available on ENCORE database.

  • 66 RBPs can affect the levels of YLPM1.  








The Knockdown/knockout RNA-Seq assay for YLPM1 is not available on ENCORE database.





66 RBPs can affect the gene expression of YLPM1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
YLPM1ENSG00000119596.132294.067302929.99960-0.353006.266805.30020HepG2AUH
YLPM1ENSG00000119596.131029.084201359.25570-0.401503.037502.09420HepG2BCLAF1
YLPM1ENSG00000119596.133458.726304940.66750-0.514503.918803.21940HepG2BOP1
YLPM1ENSG00000119596.133023.752104535.94510-0.585103.928503.12260HepG2CPSF6
YLPM1ENSG00000119596.131218.515101697.78090-0.478504.127502.87860HepG2YBX3
YLPM1ENSG00000119596.132043.486502361.25990-0.208502.883402.12780HepG2DAZAP1
YLPM1ENSG00000119596.13928.130501443.38770-0.637105.652804.79730HepG2DDX6
YLPM1ENSG00000119596.133179.073602679.033200.246802.499701.39220HepG2EIF2S2
YLPM1ENSG00000119596.132186.389701492.948500.550303.914103.10160HepG2EIF4B
YLPM1ENSG00000119596.131526.933102231.59600-0.547406.329905.12100HepG2EIF4G2
YLPM1ENSG00000119596.132381.368403364.10190-0.4984011.8474010.74390HepG2ETF1
YLPM1ENSG00000119596.134389.597103565.625200.299802.109701.43370HepG2FIP1L1
YLPM1ENSG00000119596.131515.019801126.680900.427202.168401.46520HepG2FUBP3
YLPM1ENSG00000119596.132185.044101547.145800.498004.670903.78770HepG2FXR1
YLPM1ENSG00000119596.131836.236301435.140400.355502.406301.78370HepG2G3BP1
YLPM1ENSG00000119596.132028.894701523.669400.413003.464602.46100HepG2G3BP2
YLPM1ENSG00000119596.132786.346105142.23940-0.884008.379707.30940HepG2GPKOW
YLPM1ENSG00000119596.131446.660401872.05520-0.371903.368802.61020HepG2HNRNPC
YLPM1ENSG00000119596.132623.335603065.34070-0.224602.881502.15140HepG2HNRNPF
YLPM1ENSG00000119596.132034.980201453.359600.485505.030204.10910HepG2HNRNPK
YLPM1ENSG00000119596.131684.909702150.90100-0.352306.556905.56330HepG2HNRNPL
YLPM1ENSG00000119596.133271.703504907.29830-0.584903.989503.24850HepG2HNRNPLL
YLPM1ENSG00000119596.132406.519303018.48470-0.326903.777202.94190HepG2IGF2BP1
YLPM1ENSG00000119596.132348.648402886.31030-0.297402.606601.82150HepG2MSI2
YLPM1ENSG00000119596.131899.547401437.658800.401803.705203.02430HepG2PCBP1
YLPM1ENSG00000119596.132031.405001462.966900.473509.258108.37450HepG2PTBP1
YLPM1ENSG00000119596.131195.284702235.11880-0.9030018.0638016.72210HepG2PUF60
YLPM1ENSG00000119596.132665.662002372.705000.167902.302001.75090HepG2PUM1
YLPM1ENSG00000119596.132169.144001584.226200.453206.472905.57400HepG2QKI
YLPM1ENSG00000119596.132396.362202811.75200-0.230602.569602.06530HepG2RBM22
YLPM1ENSG00000119596.132298.215501628.062500.4973010.219009.30040HepG2NELFE
YLPM1ENSG00000119596.132038.273001516.462500.426507.702406.75120HepG2RECQL
YLPM1ENSG00000119596.132294.888603302.13490-0.525004.282503.46210HepG2RPLP0
YLPM1ENSG00000119596.131378.303201849.43610-0.424202.246901.39310HepG2RPS10
YLPM1ENSG00000119596.131367.415001656.10380-0.276303.614602.89510HepG2SAFB2
YLPM1ENSG00000119596.131872.479501522.966500.298004.024203.33270HepG2SF3B4
YLPM1ENSG00000119596.133263.756705404.71970-0.727705.544004.42690HepG2SNRNP70
YLPM1ENSG00000119596.132393.337501589.717000.5902015.2893014.36910HepG2SRSF1
YLPM1ENSG00000119596.134008.705505226.02400-0.382602.454101.51650HepG2SRSF3
YLPM1ENSG00000119596.132348.943303011.59870-0.358506.446805.45570HepG2SRSF7
YLPM1ENSG00000119596.132069.358602757.25280-0.414008.555907.75150HepG2SSB
YLPM1ENSG00000119596.133120.115502509.810600.313906.212605.34990HepG2SUCLG1
YLPM1ENSG00000119596.133805.087104782.05650-0.329701.966701.34260HepG2TARDBP
YLPM1ENSG00000119596.132603.988903020.13740-0.213902.926102.21100HepG2UPF1
YLPM1ENSG00000119596.13991.692901401.88740-0.499403.099802.03790HepG2UPF2
YLPM1ENSG00000119596.131087.827801507.26460-0.470504.264703.37090HepG2XRN2
YLPM1ENSG00000119596.132319.285102745.42260-0.243303.905803.13100HepG2ZC3H8
YLPM1ENSG00000119596.131981.756402470.72420-0.318204.962604.23920K562AGGF1
YLPM1ENSG00000119596.132079.818902714.77950-0.384404.078302.83420K562AKAP8
YLPM1ENSG00000119596.131778.423802570.85800-0.531707.035005.95360K562AKAP8L
YLPM1ENSG00000119596.133378.896902252.831500.584707.983207.07300K562AQR
YLPM1ENSG00000119596.132200.765102697.36850-0.293503.699802.63060K562ATP5C1
YLPM1ENSG00000119596.131895.534301251.412000.598907.045205.17450K562CCAR1
YLPM1ENSG00000119596.132242.158302952.78920-0.397205.519503.82200K562CCDC124
YLPM1ENSG00000119596.133215.954304019.10430-0.321603.803002.88370K562CPSF6
YLPM1ENSG00000119596.132063.540901401.010500.558606.122304.02560K562DHX30
YLPM1ENSG00000119596.132394.482602766.69410-0.208402.307701.51790K562DKC1
YLPM1ENSG00000119596.13914.601701166.52660-0.351003.427301.95940K562EWSR1
YLPM1ENSG00000119596.131747.571501389.774000.330402.157301.61100K562FXR1
YLPM1ENSG00000119596.132697.921603837.20620-0.508207.099205.82660K562GPKOW
YLPM1ENSG00000119596.132213.214103021.81850-0.449305.845504.74230K562GRSF1
YLPM1ENSG00000119596.131844.742301433.173200.364102.722001.50190K562HNRNPK
YLPM1ENSG00000119596.132608.380001999.510200.383405.456004.18870K562HNRNPU
YLPM1ENSG00000119596.132027.933202728.47200-0.428105.290504.07240K562KIF1C
YLPM1ENSG00000119596.131899.349302611.69810-0.459505.480903.79140K562MAK16
YLPM1ENSG00000119596.132511.326403056.55700-0.283502.690301.79740K562MBNL1
YLPM1ENSG00000119596.132153.756203789.43890-0.815102.631101.83410K562PPIG
YLPM1ENSG00000119596.131797.577901465.205400.294902.679002.02400K562PTBP1
YLPM1ENSG00000119596.131836.529902484.23150-0.435806.852905.94740K562RBM15
YLPM1ENSG00000119596.131031.239901574.96040-0.610905.554004.39510K562RPS19
YLPM1ENSG00000119596.132584.984801927.980900.423004.940803.49290K562SAFB
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for YLPM1 is not available on ENCORE database.





10 RBPs can affect the splicing of YLPM1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEYLPM1ENSG00000119596.13chr14+752909587529101075287759752878407529591575296046-0.085000.011220.09986excludedHepG2U2AF2
SEYLPM1ENSG00000119596.13chr14+752909587529101075287759752878407529591575296046-0.364000.000000.00000excludedK562AQR
SEYLPM1ENSG00000119596.13chr14+7529095875291010752877597528784075295915752960460.087000.001340.08473includedHepG2DDX3X
SEYLPM1ENSG00000119596.13chr14+752909587529101075287759752878407529591575296046-0.269000.000230.00492excludedK562PUS1
SEYLPM1ENSG00000119596.13chr14+7529095875291010752877597528784075295915752960460.059000.000850.04050includedHepG2SFPQ
SEYLPM1ENSG00000119596.13chr14+752642827526640075248087752490287526925875269379-0.295000.000040.00308excludedHepG2MATR3
SEYLPM1ENSG00000119596.13chr14+752642827526640075248087752490287526925875269379-0.261000.000630.01753excludedHepG2SRSF1
SEYLPM1ENSG00000119596.13chr14+752909587529101075287759752878407529591575296046-0.100000.000200.00824excludedHepG2SF3A3
SEYLPM1ENSG00000119596.13chr14+752909587529101075287759752878407529591575296046-0.254000.000350.01542excludedK562UTP18
SEYLPM1ENSG00000119596.13chr14+7529095875291010752877597528784075295915752960460.083000.001810.06287includedK562PTBP1
A3SSYLPM1ENSG00000119596.13chr14+7527830075278480752783227527848075276901752771230.063000.000240.00191longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for YLPM1 is not avaliable on ENCORE database.