NLRC5

General Information

Gene Name       : NLRC5
Gene ID             : ENSG00000140853.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NLRC5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NLRC5ENSG00000140853.1532.4849.6641.07ENCSR000AEF
HepG2NLRC5ENSG00000140853.154.122.103.11ENCSR985KAT
K562NLRC5ENSG00000140853.150.000.030.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NLRC5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NLRC5 RNA is bound by 1 proteins.  







eCLIP assay for NLRC5 is not avaliable on ENCORE database.





1 proteins are bound to NLRC5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr165707985757079935+intron-Distal4.460263.18269HepG2XPO5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NLRC5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NLRC5 is not available on ENCORE database.

  • 65 RBPs can affect the levels of NLRC5.  








The Knockdown/knockout RNA-Seq assay for NLRC5 is not available on ENCORE database.





65 RBPs can affect the gene expression of NLRC5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NLRC5ENSG00000140853.11258.51650128.642001.006803.705301.72700HepG2AARS
NLRC5ENSG00000140853.11192.36680264.03900-0.456902.484601.90340HepG2ACO1
NLRC5ENSG00000140853.11677.31460411.094900.720305.467904.55900HepG2AUH
NLRC5ENSG00000140853.1177.36350131.25230-0.762602.171401.34480HepG2BCCIP
NLRC5ENSG00000140853.11255.11060148.554200.780003.057802.02980HepG2CCAR1
NLRC5ENSG00000140853.11177.08480117.793300.588102.020701.42300HepG2CPSF6
NLRC5ENSG00000140853.11146.99730240.30880-0.709104.030102.70500HepG2CPSF7
NLRC5ENSG00000140853.11232.48880157.746000.559503.062302.28880HepG2DAZAP1
NLRC5ENSG00000140853.11161.52470244.18540-0.596203.820102.85950HepG2DDX19B
NLRC5ENSG00000140853.11221.79070120.716700.877502.682601.41250HepG2DDX27
NLRC5ENSG00000140853.1163.42490129.06650-1.025002.920002.12860HepG2DDX55
NLRC5ENSG00000140853.11226.55800133.765000.760102.680801.72080HepG2DDX59
NLRC5ENSG00000140853.1169.06610113.01860-0.710502.333801.68180HepG2DNAJC21
NLRC5ENSG00000140853.11168.77490112.045300.590902.705902.06000HepG2DNAJC2
NLRC5ENSG00000140853.11295.84800160.078800.886002.288001.74490HepG2EIF2S1
NLRC5ENSG00000140853.11238.59960155.623600.616403.234102.34340HepG2EIF4G1
NLRC5ENSG00000140853.11333.72380149.077901.162509.975608.47600HepG2EIF4G2
NLRC5ENSG00000140853.11109.55400252.82580-1.206508.831407.05120HepG2ESF1
NLRC5ENSG00000140853.11274.21040472.04330-0.783606.516005.65800HepG2ETF1
NLRC5ENSG00000140853.11162.23660257.98840-0.669203.797502.81810HepG2EWSR1
NLRC5ENSG00000140853.11421.64720143.061801.5593015.2886012.90900HepG2GNB2L1
NLRC5ENSG00000140853.11239.89610132.827500.852803.757401.55720HepG2GRWD1
NLRC5ENSG00000140853.11522.08700203.096701.3620023.2622021.46440HepG2HNRNPF
NLRC5ENSG00000140853.11100.16320203.31350-1.021406.279004.92590HepG2HNRNPM
NLRC5ENSG00000140853.11260.81520126.085401.048508.883507.84480HepG2HNRNPU
NLRC5ENSG00000140853.11505.66620199.992001.3381019.1854017.47170HepG2IGF2BP1
NLRC5ENSG00000140853.11172.49730288.09700-0.740003.432001.93490HepG2ILF3
NLRC5ENSG00000140853.111771.91580638.196101.473109.596007.35670HepG2KRR1
NLRC5ENSG00000140853.1189.67260147.14120-0.714502.656201.47200HepG2LIN28B
NLRC5ENSG00000140853.1194.59350200.26400-1.082106.859204.97150HepG2NAA15
NLRC5ENSG00000140853.1158.23300112.98870-0.956302.754302.00800HepG2NSUN2
NLRC5ENSG00000140853.1165.89510270.11620-2.0353015.0028012.89390HepG2PABPC1
NLRC5ENSG00000140853.11325.86250159.405501.0315010.153409.10740HepG2PCBP1
NLRC5ENSG00000140853.11318.47180140.256901.183008.042106.36950HepG2PCBP2
NLRC5ENSG00000140853.1183.31980218.43000-1.390404.761803.77820HepG2PRPF4
NLRC5ENSG00000140853.11292.31750149.316200.969107.033306.14030HepG2PUF60
NLRC5ENSG00000140853.11360.75090158.389601.1874011.9000010.56440HepG2PUM2
NLRC5ENSG00000140853.11361.57940269.403400.424402.290901.50270HepG2RBM15
NLRC5ENSG00000140853.11274.66480394.53010-0.522502.056501.59200HepG2RBM22
NLRC5ENSG00000140853.11384.11570169.100101.183609.134907.32010HepG2RBM27
NLRC5ENSG00000140853.11249.88600180.516600.469002.156701.66710HepG2NELFE
NLRC5ENSG00000140853.11242.33560168.139700.527202.593201.99380HepG2RECQL
NLRC5ENSG00000140853.11463.10330218.789001.0817011.127109.91540HepG2RPLP0
NLRC5ENSG00000140853.11290.32460133.002601.126106.816005.38060HepG2RPS10
NLRC5ENSG00000140853.11151.86020279.49850-0.880105.024803.25950HepG2SART3
NLRC5ENSG00000140853.11266.9828098.027701.4454011.276009.43780HepG2SERBP1
NLRC5ENSG00000140853.11122.47190204.16170-0.737303.507702.74500HepG2SF3A3
NLRC5ENSG00000140853.11267.96270168.865700.666103.887803.20650HepG2SF3B4
NLRC5ENSG00000140853.1188.65560130.92910-0.562501.859601.31470HepG2SMN1
NLRC5ENSG00000140853.11246.61350131.940900.902304.849502.70300HepG2SND1
NLRC5ENSG00000140853.11483.75300147.426901.7142024.3989022.80550HepG2SRSF5
NLRC5ENSG00000140853.11563.27230199.536701.497108.049406.96440HepG2SRSF7
NLRC5ENSG00000140853.11171.30710258.22320-0.592002.635401.56550HepG2STIP1
NLRC5ENSG00000140853.1197.30540198.95350-1.031806.355804.96880HepG2SUPT6H
NLRC5ENSG00000140853.11215.68250158.451900.444801.958601.47270HepG2TAF15
NLRC5ENSG00000140853.11215.02090124.234400.791303.752702.92450HepG2TARDBP
NLRC5ENSG00000140853.111255.32110625.274801.005403.809702.56780HepG2TBRG4
NLRC5ENSG00000140853.11269.05300122.484801.135209.380208.55540HepG2TIAL1
NLRC5ENSG00000140853.1182.46950123.61270-0.583901.988701.49550HepG2TRIM56
NLRC5ENSG00000140853.11146.04820252.09820-0.787504.052603.29800HepG2U2AF1
NLRC5ENSG00000140853.11447.74120154.404401.535905.812004.56800HepG2UBE2L3
NLRC5ENSG00000140853.11201.4644075.863101.409008.674507.32760HepG2UCHL5
NLRC5ENSG00000140853.11324.18660186.103400.800606.558605.01900HepG2UTP18
NLRC5ENSG00000140853.11108.57860174.80650-0.687002.958502.34270HepG2UTP3
NLRC5ENSG00000140853.11146.38900199.13160-0.443901.938601.45870HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NLRC5 is not available on ENCORE database.






No RBPs affect the alternative splcing events of NLRC5 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for NLRC5 is not avaliable on ENCORE database.