PDXDC1

General Information

Gene Name       : PDXDC1
Gene ID             : ENSG00000179889.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PDXDC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PDXDC1ENSG00000179889.1840.7735.2838.03ENCSR000AEF
HepG2PDXDC1ENSG00000179889.1899.27105.99102.63ENCSR985KAT
K562PDXDC1ENSG00000179889.1828.3029.8129.05ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PDXDC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PDXDC1 RNA is bound by 42 proteins.  







eCLIP assay for PDXDC1 is not avaliable on ENCORE database.





42 proteins are bound to PDXDC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr161513133815131392+3'-UTR,intron-Distal3.251888.07303HepG2ZC3H11A
chr161513052715130595+3'-UTR,intron-Distal4.403974.42935K562SND1
chr161512928115129329+3'-UTR,CDS,intron-Distal,intron-Proximal3.860594.00320K562AQR
chr161512720615127261+3'-UTR,CDS,intron-Distal,intron-Proximal3.5445614.74273HepG2BCLAF1
chr161513149215131544+3'-UTR,intron-Distal3.545444.25145K562LIN28B
chr161513145415131502+3'-UTR,intron-Distal5.039627.21253K562UPF1
chr161513061315130694+3'-UTR,intron-Distal3.7913610.66463HepG2UPF1
chr161513011515130207+3'-UTR,CDS,intron-Distal3.796483.04123K562LIN28B
chr161513072015130840+3'-UTR,intron-Distal3.950696.49446K562IGF2BP1
chr161513098115131050+3'-UTR,intron-Distal4.482165.98988HepG2IGF2BP3
chr161512722715127306+3'-UTR,CDS,intron-Distal,intron-Proximal3.8775328.51194HepG2PRPF8
chr161513094615131038+3'-UTR,intron-Distal3.995007.42080HepG2AKAP1
chr161513112715131256+3'-UTR,intron-Distal3.8045317.93753K562UPF1
chr161512989315129941+3'-UTR,CDS,intron-Distal3.806215.99043HepG2GRWD1
chr161509162815091683+3'-UTR,5'-UTR,CDS3.0400910.76120HepG2GRWD1
chr161513106215131127+3'-UTR,intron-Distal4.578939.54560K562UPF1
chr161512925515129351+3'-UTR,CDS,intron-Distal,intron-Proximal3.304508.40293K562BUD13
chr161513050615130575+3'-UTR,intron-Distal3.800345.39224HepG2IGF2BP1
chr161513052415130548+3'-UTR,intron-Distal3.246163.02556K562IGF2BP2
chr161510266015102699+3'-UTR,CDS,intron-Distal3.423925.60389HepG2PPIG
chr161513144515131531+3'-UTR,intron-Distal3.0555712.02681HepG2ZC3H11A
chr161512714815127259+3'-UTR,CDS,intron-Distal,intron-Proximal3.7926418.91966HepG2GRWD1
chr161513091715131053+3'-UTR,intron-Distal5.7882614.52363HepG2UPF1
chr161512831415128344+3'-UTR,CDS,intron-Distal3.835298.19289HepG2PPIG
chr161512717915127206+3'-UTR,CDS,intron-Distal3.613909.03865HepG2BCLAF1
chr161512823015128292+3'-UTR,CDS,intron-Distal,intron-Proximal3.543739.83690HepG2PRPF8
chr161512928615129331+3'-UTR,CDS,intron-Distal,intron-Proximal3.226225.84601HepG2PRPF8
chr161513105315131109+3'-UTR,intron-Distal3.193754.92291HepG2UPF1
chr161512838415128411+3'-UTR,CDS,intron-Distal,intron-Proximal3.1777611.67739HepG2BCLAF1
chr161512818215128237+3'-UTR,CDS,intron-Distal,intron-Proximal3.623433.49192HepG2UCHL5
chr161513059915130695+3'-UTR,intron-Distal5.0489763.13087K562PUM2
chr161512813315128191+3'-UTR,CDS,intron-Distal,intron-Proximal3.530754.25142K562BUD13
chr161512838715128410+3'-UTR,CDS,intron-Distal3.884185.98815HepG2G3BP1
chr161510029615100353+3'-UTR,CDS,intron-Distal3.179136.80995K562ZNF622
chr161513077315130822+3'-UTR,intron-Distal3.474065.20767K562PUM2
chr161512829315128348+3'-UTR,CDS,intron-Distal,intron-Proximal3.453517.54792HepG2PRPF8
chr161512925315129362+3'-UTR,CDS,intron-Distal,intron-Proximal3.413238.58414K562SF3B4
chr161513145215131509+3'-UTR,intron-Distal5.344205.56169K562ZC3H11A
chr161513023315130283+3'-UTR,intron-Distal4.038223.82297K562NOLC1
chr161512840015128464+3'-UTR,CDS,intron-Distal,intron-Proximal3.3895412.21145HepG2PRPF8
chr161513012715130217+3'-UTR,CDS,intron-Distal3.899066.53930HepG2G3BP1
chr161512930315129392+3'-UTR,CDS,intron-Distal,intron-Proximal3.002153.90015HepG2PABPN1
chr161512939115129453+3'-UTR,CDS,intron-Distal,intron-Proximal3.9364712.22854HepG2PRPF8
chr161513069415130759+3'-UTR,intron-Distal5.068977.10674HepG2UPF1
chr161512812315128154+3'-UTR,CDS,intron-Distal,intron-Proximal3.555256.36450HepG2U2AF2
chr161510028815100368+3'-UTR,CDS,intron-Distal3.6401316.07674HepG2BCLAF1
chr161509159715091640+3'-UTR,5'-UTR,CDS,intron-Proximal3.141895.79202HepG2U2AF2
chr161513047315130580+3'-UTR,intron-Distal3.619443.83396HepG2IGF2BP3
chr161513145415131517+3'-UTR,intron-Distal4.098944.49052K562DDX6
chr161513014315130208+3'-UTR,intron-Distal5.494718.21523HepG2SUB1
chr161513105815131102+3'-UTR,intron-Distal3.168913.82829K562IGF2BP2
chr161512716715127257+3'-UTR,CDS,intron-Distal,intron-Proximal3.503663.15380HepG2SRSF7
chr161513047115130551+3'-UTR,intron-Distal3.767653.57974K562IGF2BP1
chr161510025915100359+3'-UTR,CDS,intron-Distal4.1033510.57284K562UCHL5
chr161509161215091684+3'-UTR,5'-UTR,CDS,intron-Proximal3.326225.67153K562ZNF800
chr161509162615091684+3'-UTR,5'-UTR,CDS,intron-Proximal3.767848.38234K562UCHL5
chr161510026015100365+3'-UTR,CDS,intron-Distal3.1308311.67387HepG2GRWD1
chr161512814115128149+3'-UTR,CDS,intron-Distal,intron-Proximal3.735556.06436HepG2BCLAF1
chr161513076615130801+3'-UTR,intron-Distal3.850123.34655HepG2AKAP1
chr161506892915069045+5'-UTR,intron-Distal,intron-Proximal4.161083.53067K562SRSF1
chr161506907515069082+5'-UTR,CDS,intron-Distal,intron-Proximal4.696238.99007HepG2AQR
chr161506892715068966+5'-UTR,intron-Distal,intron-Proximal4.152535.01580HepG2DDX3X
chr161506892015069063+5'-UTR,CDS,intron-Distal,intron-Proximal3.0108111.29408HepG2NCBP2
chr161509222015092256+CDS3.4206919.63699HepG2GRWD1
chr161512277215122824+CDS,intron-Distal,intron-Proximal3.0484412.44532HepG2PPIG
chr161509225615092263+CDS,intron-Proximal3.7159115.01047HepG2GRWD1
chr161512558915125612+CDS,intron-Distal,intron-Proximal3.922878.29368HepG2G3BP1
chr161512281915122837+CDS,intron-Distal,intron-Proximal3.860597.30031K562AQR
chr161511654615116634+CDS,intron-Distal,intron-Proximal4.356064.19412K562EFTUD2
chr161512386415123913+CDS,intron-Distal3.126105.66840K562ZNF622
chr161511654415116602+CDS,intron-Distal,intron-Proximal4.955498.54916K562SF3B4
chr161509223415092266+CDS,intron-Proximal3.064723.78281HepG2SRSF1
chr161512267515122815+CDS,intron-Distal,intron-Proximal3.4228110.72818K562SF3B4
chr161512380715123862+CDS,intron-Distal,intron-Proximal3.6910013.65160HepG2PPIG
chr161509220715092263+CDS,intron-Proximal4.579299.34665HepG2TRA2A
chr161509563515095641+CDS,intron-Distal3.8770815.00542HepG2GRWD1
chr161509569015095710+CDS,intron-Distal,intron-Proximal4.9305917.02148HepG2PPIG
chr161509564415095689+CDS,intron-Distal,intron-Proximal4.8662048.55969HepG2BCLAF1
chr161509563115095705+CDS,intron-Distal,intron-Proximal3.601305.77999K562MTPAP
chr161509222515092263+CDS,intron-Proximal3.4353012.51258K562UCHL5
chr161509563115095635+CDS,intron-Distal,intron-Proximal3.8299214.40133HepG2GRWD1
chr161509565915095711+CDS,intron-Distal,intron-Proximal3.147918.52466K562UCHL5
chr161509566015095714+CDS,intron-Distal,intron-Proximal4.1542823.18518K562DDX24
chr161509219515092225+CDS,intron-Proximal4.0724211.62230K562UCHL5
chr161512573115125764+CDS,intron-Distal,intron-Proximal3.228215.03485HepG2G3BP1
chr161512559115125698+CDS,intron-Distal,intron-Proximal3.6664729.78378HepG2BCLAF1
chr161512565215125733+CDS,intron-Distal3.6822813.40405HepG2PPIG
chr161509564115095659+CDS,intron-Distal,intron-Proximal3.049537.66961K562UCHL5
chr161509164615091683+CDS3.9250412.55157HepG2BCLAF1
chr161512573015125796+CDS,intron-Distal,intron-Proximal4.230267.79098HepG2PRPF8
chr161512388615123913+CDS,intron-Distal3.569964.22242HepG2G3BP1
chr161512570715125769+CDS,intron-Distal,intron-Proximal3.425475.53307K562ZNF622
chr161512569815125835+CDS,intron-Distal,intron-Proximal3.0728116.08912HepG2BCLAF1
chr161509219615092222+CDS,intron-Proximal3.0377912.48390K562ZNF622
chr161509562915095708+CDS,intron-Distal,intron-Proximal3.9597512.41321HepG2FXR2
chr161512558815125733+CDS,intron-Distal,intron-Proximal4.374214.07830K562SRSF1
chr161512379215123842+CDS,intron-Distal,intron-Proximal3.192203.01994K562BUD13
chr161509563115095655+CDS,intron-Distal,intron-Proximal4.004393.89786K562RBFOX2
chr161512559115125643+CDS,intron-Distal,intron-Proximal3.0759312.92676HepG2PPIG
chr161512559115125730+CDS,intron-Distal,intron-Proximal3.3865320.65459HepG2GRWD1
chr161509220415092263+CDS,intron-Proximal4.0579628.84363K562DDX24
chr161512671415126809+CDS,intron-Distal,intron-Proximal4.4104215.04885HepG2G3BP1
chr161512682115126837+CDS,intron-Distal,intron-Proximal4.076288.00190HepG2GRWD1
chr161509225315092262+CDS3.1940019.18866HepG2PPIG
chr161512672415126806+CDS,intron-Distal3.077643.26317HepG2FXR2
chr161512573015125777+CDS,intron-Distal,intron-Proximal3.052746.54912HepG2GRWD1
chr161509163915091684+CDS,intron-Proximal3.005808.97400K562ZNF622
chr161509563115095657+CDS,intron-Distal,intron-Proximal3.6169116.53796K562ZNF622
chr161512559015125650+CDS,intron-Distal,intron-Proximal3.549125.93218HepG2SRSF1
chr161512380715123847+CDS,intron-Distal,intron-Proximal3.638324.20387K562ZNF622
chr161509563715095654+CDS,intron-Distal,intron-Proximal3.0595115.62838HepG2PPIG
chr161509565715095715+CDS,intron-Distal,intron-Proximal4.5923620.26632K562ZNF622
chr161512680915126838+CDS,intron-Distal,intron-Proximal3.669624.22242HepG2G3BP1
chr161512559415125698+CDS,intron-Distal3.289047.76028HepG2ZNF800
chr161512283715122870+CDS,intron-Distal,intron-Proximal5.511398.34710K562AQR
chr161512387315123913+CDS,intron-Distal3.781365.14253HepG2GRWD1
chr161509219615092204+CDS,intron-Proximal4.198027.40437K562DDX24
chr161509219515092203+CDS,intron-Proximal3.6848910.67070HepG2BCLAF1
chr161509221315092263+CDS,intron-Proximal3.075958.15779K562ZNF800
chr161509563115095645+CDS,intron-Distal,intron-Proximal4.0065623.02733K562DDX24
chr161509219315092265+CDS,intron-Proximal3.0387314.39767HepG2BUD13
chr161509565415095690+CDS,intron-Distal,intron-Proximal3.9033921.56788HepG2PPIG
chr161509563215095708+CDS,intron-Distal,intron-Proximal3.555979.45398K562GRWD1
chr161509563015095706+CDS,intron-Distal,intron-Proximal4.180853.53067K562SRSF1
chr161512676315126813+CDS,intron-Distal3.397185.53307K562ZNF622
chr161511654815116600+CDS,intron-Distal,intron-Proximal3.958963.95991K562U2AF2
chr161509219515092234+CDS,intron-Proximal3.136275.33097HepG2SRSF1
chr161509563115095641+CDS,intron-Distal,intron-Proximal3.323437.53556K562UCHL5
chr161509565715095710+CDS,intron-Distal,intron-Proximal3.7730613.32647HepG2GRWD1
chr161509563115095708+CDS,intron-Distal,intron-Proximal3.0587811.67401HepG2ZNF800
chr161509163715091684+CDS,intron-Proximal3.994738.43090K562DDX24
chr161512561215125684+CDS,intron-Distal3.489928.78317HepG2G3BP1
chr161509225315092263+CDS,intron-Proximal3.352655.49645K562GRWD1
chr161509219815092263+CDS,intron-Proximal3.135298.03395HepG2FXR2
chr161509564115095657+CDS,intron-Distal,intron-Proximal3.4035113.37147HepG2GRWD1
chr161512713415127148+CDS,intron-Distal,intron-Proximal3.931036.91167HepG2GRWD1
chr161509568915095710+CDS,intron-Distal,intron-Proximal4.5480720.81265HepG2BCLAF1
chr161511126715111321+CDS,intron-Distal,intron-Proximal4.055274.75655HepG2PRPF8
chr161509225615092263+CDS,intron-Proximal4.1251816.34640HepG2BCLAF1
chr161512565115125750+CDS,intron-Distal3.119646.45193HepG2UCHL5
chr161509563115095644+CDS,intron-Distal,intron-Proximal4.2379122.59489HepG2BCLAF1
chr161509219615092213+CDS,intron-Proximal3.610163.52794K562ZNF800
chr161509221415092256+CDS3.8409829.24396HepG2BCLAF1
chr161509563215095699+CDS,intron-Distal,intron-Proximal3.103745.31261HepG2TRA2A
chr161506908215069114+intron-Distal,intron-Proximal5.565268.52745HepG2AQR
chr161512728615127335+intron-Distal,intron-Proximal4.109975.39582HepG2RBM22
chr161512734415127444+intron-Distal,intron-Proximal5.281207.79404K562PRPF8
chr161510421415104268+intron-Distal4.212475.02158HepG2ILF3
chr161512807715128138+intron-Distal,intron-Proximal4.472877.82456K562SF3B4
chr161512727215127340+intron-Distal,intron-Proximal3.559684.35635K562PRPF8
chr161510277115102860+intron-Distal,intron-Proximal4.730684.53660HepG2KHSRP
chr161508291515082976+intron-Distal4.030193.07008K562NONO
chr161508918515089268+intron-Distal4.102143.34098HepG2HNRNPM
chr161510049115100563+intron-Distal,intron-Proximal3.481527.20875K562KHSRP
chr161512842515128541+intron-Distal,intron-Proximal5.216858.59716K562BUD13
chr161512807815128122+intron-Distal,intron-Proximal4.209666.84121HepG2SF3B4
chr161506927315069345+intron-Distal5.4194013.38060HepG2EFTUD2
chr161512826915128314+intron-Distal,intron-Proximal4.534458.55478HepG2SF3A3
chr161510271815102838+intron-Distal,intron-Proximal4.378394.58968K562PRPF8
chr161510278215102864+intron-Distal,intron-Proximal4.2139610.04635K562KHSRP
chr161510048115100552+intron-Distal,intron-Proximal4.395765.07255HepG2KHSRP
chr161512873715128786+intron-Distal4.564344.98857K562TIA1
chr161512729515127345+intron-Distal,intron-Proximal4.2214310.30373HepG2EFTUD2
chr161512708215127121+intron-Distal,intron-Proximal4.900684.40745K562SF3B4
chr161512844715128553+intron-Distal,intron-Proximal4.0267718.58746HepG2EFTUD2
chr161510077915100851+intron-Distal3.002263.04623HepG2KHSRP
chr161512841015128486+intron-Distal,intron-Proximal3.500084.88100K562AQR
chr161511650715116544+intron-Distal,intron-Proximal5.677818.42776K562SF3B4
chr161512596015126032+intron-Distal3.605616.17334HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PDXDC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PDXDC1 is not available on ENCORE database.

  • 95 RBPs can affect the levels of PDXDC1.  








The Knockdown/knockout RNA-Seq assay for PDXDC1 is not available on ENCORE database.





95 RBPs can affect the gene expression of PDXDC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PDXDC1ENSG00000179889.143579.151106028.73890-0.7522035.9293034.34240HepG2ACO1
PDXDC1ENSG00000179889.143510.692604783.76600-0.446404.782703.51840HepG2ADAR
PDXDC1ENSG00000179889.144985.510608257.24900-0.727909.101308.19910HepG2AKAP1
PDXDC1ENSG00000179889.144563.972206057.09780-0.408309.610408.28640HepG2AKAP8L
PDXDC1ENSG00000179889.147507.350008335.97480-0.151001.943501.34980HepG2AUH
PDXDC1ENSG00000179889.145393.625904197.658000.361602.839901.92940HepG2BCLAF1
PDXDC1ENSG00000179889.142640.356304773.36530-0.8543017.8660016.54100HepG2BOP1
PDXDC1ENSG00000179889.143780.722104882.56150-0.369005.231004.21180HepG2CALR
PDXDC1ENSG00000179889.144970.764007501.25240-0.593705.444204.05390HepG2CCAR1
PDXDC1ENSG00000179889.144773.539206027.46990-0.336509.295208.21630HepG2CKAP4
PDXDC1ENSG00000179889.144169.505305562.81520-0.415902.206501.52890HepG2CNOT7
PDXDC1ENSG00000179889.145540.675504382.102800.338303.109302.38570HepG2CPSF6
PDXDC1ENSG00000179889.148181.567507190.010400.186303.476902.66340HepG2DAZAP1
PDXDC1ENSG00000179889.144235.803805575.73870-0.3965011.032609.59040HepG2DDX19B
PDXDC1ENSG00000179889.146346.329404912.484600.369406.855005.13500HepG2DDX1
PDXDC1ENSG00000179889.143687.194904454.80420-0.272802.857601.92710HepG2DDX24
PDXDC1ENSG00000179889.1410752.019607909.574700.442804.437303.65900HepG2DDX3X
PDXDC1ENSG00000179889.143423.979804749.85930-0.472204.219703.28680HepG2DDX55
PDXDC1ENSG00000179889.147976.381405716.083900.480605.852404.43920HepG2DDX5
PDXDC1ENSG00000179889.149213.689206531.688400.496205.491304.67220HepG2EIF2S1
PDXDC1ENSG00000179889.143729.603705371.99660-0.526408.790706.85650HepG2EIF2S2
PDXDC1ENSG00000179889.142572.235904197.04450-0.706409.453707.88080HepG2EIF3D
PDXDC1ENSG00000179889.144557.782907028.27120-0.624805.479304.53440HepG2EIF4B
PDXDC1ENSG00000179889.145091.414109571.15070-0.9106047.7674045.84860HepG2ETF1
PDXDC1ENSG00000179889.144756.087305891.19160-0.308803.402702.47530HepG2EWSR1
PDXDC1ENSG00000179889.145458.182707150.19960-0.389603.113602.30210HepG2FIP1L1
PDXDC1ENSG00000179889.145990.716507283.50460-0.281902.130701.51980HepG2FXR1
PDXDC1ENSG00000179889.145385.308306756.07730-0.327202.423301.79870HepG2G3BP1
PDXDC1ENSG00000179889.142918.839503736.93990-0.356503.288002.30130HepG2GEMIN5
PDXDC1ENSG00000179889.146858.576304967.162900.465404.424703.62730HepG2GPKOW
PDXDC1ENSG00000179889.143219.889704863.07400-0.594909.919508.80750HepG2HNRNPA1
PDXDC1ENSG00000179889.144375.477505409.34400-0.306003.029602.30830HepG2HNRNPC
PDXDC1ENSG00000179889.145821.178106549.56640-0.170103.049602.34390HepG2HNRNPL
PDXDC1ENSG00000179889.144368.986905373.57530-0.298605.733704.88580HepG2HNRNPU
PDXDC1ENSG00000179889.144952.328905511.04890-0.154202.387501.43920HepG2KIF1C
PDXDC1ENSG00000179889.149002.091006703.060600.425302.819301.56050HepG2KRR1
PDXDC1ENSG00000179889.143224.575304392.61880-0.446002.419001.43320HepG2METAP2
PDXDC1ENSG00000179889.146031.955607129.59650-0.241202.888702.10940HepG2NOL12
PDXDC1ENSG00000179889.145265.571104203.378100.324903.024002.24240HepG2NSUN2
PDXDC1ENSG00000179889.147194.001705084.965300.500502.701001.82520HepG2PABPC1
PDXDC1ENSG00000179889.148590.490506677.988300.363203.067502.30920HepG2PABPC4
PDXDC1ENSG00000179889.144802.949706635.70330-0.4663013.0343011.87090HepG2PCBP1
PDXDC1ENSG00000179889.145820.628304955.315800.232103.477302.62050HepG2PRPF4
PDXDC1ENSG00000179889.145790.068007224.64670-0.319309.507008.54540HepG2PUM1
PDXDC1ENSG00000179889.143624.114704991.45720-0.461802.317801.66900HepG2RAVER1
PDXDC1ENSG00000179889.143956.062307999.64080-1.0159047.2011045.56800HepG2RBM22
PDXDC1ENSG00000179889.144459.875905598.96890-0.328202.772501.77920HepG2RBM27
PDXDC1ENSG00000179889.143484.841004546.60570-0.383703.004601.89950HepG2RCC2
PDXDC1ENSG00000179889.145851.329407514.44490-0.360908.303007.45720HepG2NELFE
PDXDC1ENSG00000179889.146216.298806998.85710-0.171102.280601.71460HepG2RECQL
PDXDC1ENSG00000179889.143968.979606162.89220-0.6348010.861509.66140HepG2RPLP0
PDXDC1ENSG00000179889.143594.178204902.96270-0.448002.641701.71570HepG2RPS10
PDXDC1ENSG00000179889.142118.063704083.87980-0.9472024.3512022.81970HepG2RPS19
PDXDC1ENSG00000179889.144213.952105271.04650-0.322902.691401.63140HepG2RPS5
PDXDC1ENSG00000179889.142763.126303624.41090-0.391403.062002.24110HepG2RRP9
PDXDC1ENSG00000179889.146181.989707029.69660-0.185402.590402.01430HepG2SF3B4
PDXDC1ENSG00000179889.148028.361706525.670100.298908.188107.07910HepG2SLBP
PDXDC1ENSG00000179889.144689.295205580.46940-0.251005.605304.74130HepG2SMN1
PDXDC1ENSG00000179889.146842.398405088.897200.427002.808201.84420HepG2SMNDC1
PDXDC1ENSG00000179889.143792.658109035.17600-1.25230106.97010104.99040HepG2SRFBP1
PDXDC1ENSG00000179889.148904.296907337.565300.279106.342405.69790HepG2SRSF1
PDXDC1ENSG00000179889.143670.715505048.84410-0.459903.679802.50890HepG2SRSF3
PDXDC1ENSG00000179889.145420.049206719.72130-0.310106.215905.33060HepG2SRSF5
PDXDC1ENSG00000179889.145228.261105969.57250-0.191302.837402.28020HepG2SRSF9
PDXDC1ENSG00000179889.149558.168307844.455600.285006.036505.33430HepG2SSB
PDXDC1ENSG00000179889.145753.982604828.657900.252802.631301.71280HepG2SUPT6H
PDXDC1ENSG00000179889.147410.561506060.139700.290103.462602.53160HepG2TIA1
PDXDC1ENSG00000179889.143883.107005221.15750-0.427207.137606.40240HepG2TIAL1
PDXDC1ENSG00000179889.146804.439705268.126000.369108.736307.82210HepG2TRIM56
PDXDC1ENSG00000179889.141155.639002793.15900-1.2732027.6262025.36200HepG2UCHL5
PDXDC1ENSG00000179889.146066.898406918.53210-0.189502.411801.42270HepG2UTP18
PDXDC1ENSG00000179889.142959.327706498.56620-1.1349056.9034054.73230HepG2UTP3
PDXDC1ENSG00000179889.143897.448304890.28690-0.327408.126107.07740HepG2ZC3H8
PDXDC1ENSG00000179889.149974.754107402.871400.4301018.2201017.12130HepG2ZNF622
PDXDC1ENSG00000179889.143013.268203793.67110-0.332302.789602.21940K562AGGF1
PDXDC1ENSG00000179889.142347.075201935.129300.278303.894902.74100K562BCLAF1
PDXDC1ENSG00000179889.14922.611501194.15160-0.372202.778701.72360K562CCAR1
PDXDC1ENSG00000179889.143972.393303116.963000.349803.413901.98040K562CIRBP
PDXDC1ENSG00000179889.142307.459801581.115100.545308.165806.80420K562CPSF6
PDXDC1ENSG00000179889.143296.617702669.982200.304103.070701.96930K562DDX3X
PDXDC1ENSG00000179889.142010.571101563.832300.362403.045602.08590K562EFTUD2
PDXDC1ENSG00000179889.143458.220102932.690300.237703.151001.85010K562EIF2S1
PDXDC1ENSG00000179889.142077.362801608.803600.368703.255002.32250K562FMR1
PDXDC1ENSG00000179889.141999.666001363.630700.552205.603504.25190K562FTO
PDXDC1ENSG00000179889.142043.075102900.90910-0.5058010.330109.24570K562FXR1
PDXDC1ENSG00000179889.142811.837401509.552400.8973018.4020016.27430K562GPKOW
PDXDC1ENSG00000179889.142028.371002494.65930-0.298502.951401.84050K562HNRNPA1
PDXDC1ENSG00000179889.142061.059901595.388700.369402.675001.75990K562HNRNPM
PDXDC1ENSG00000179889.142295.556203056.47000-0.413004.867103.74460K562MAGOH
PDXDC1ENSG00000179889.142853.478402518.178600.180202.027701.33040K562MTPAP
PDXDC1ENSG00000179889.143533.325202785.463300.343004.286402.74160K562NCBP2
PDXDC1ENSG00000179889.142436.745802969.56560-0.285302.821602.15160K562PTBP1
PDXDC1ENSG00000179889.145088.136903914.408200.378204.037203.39970K562PUS1
PDXDC1ENSG00000179889.142222.947802847.35950-0.357203.387702.45240K562RBM22
PDXDC1ENSG00000179889.142092.024002996.41360-0.518305.839504.17030K562NELFE
PDXDC1ENSG00000179889.141773.881202535.41860-0.515305.440003.96890K562RPS3
PDXDC1ENSG00000179889.143509.886302760.911100.346203.551202.63520K562SF3A3
PDXDC1ENSG00000179889.143409.776002911.184700.228002.047101.42850K562SRSF1
PDXDC1ENSG00000179889.141985.567202447.71480-0.301902.857801.78310K562SRSF4
PDXDC1ENSG00000179889.143003.567602420.585800.311204.539003.01860K562SRSF7
PDXDC1ENSG00000179889.142937.778102327.399700.335902.605601.39790K562STAU1
PDXDC1ENSG00000179889.141894.220101473.367800.362402.564101.59020K562SUPV3L1
PDXDC1ENSG00000179889.142057.635302946.26490-0.517905.964604.89760K562TARDBP
PDXDC1ENSG00000179889.143576.592802942.384100.281504.540102.91400K562TROVE2
PDXDC1ENSG00000179889.145467.687402966.548400.8820017.7962016.14590K562UPF1
PDXDC1ENSG00000179889.145002.861703954.569600.339103.955802.40130K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PDXDC1 is not available on ENCORE database.





26 RBPs can affect the splicing of PDXDC1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPDXDC1ENSG00000179889.14chr16+150956321509574415092196150922621509804315098190-0.125000.006000.08745excludedK562SRSF1
SEPDXDC1ENSG00000179889.14chr16+151204991512056315116560151166111512273415122823-0.058000.006340.08868excludedK562SF3B4
SEPDXDC1ENSG00000179889.14chr16+150956321509571315092196150922621509804315098190-0.189000.000600.02515excludedK562PRPF8
SEPDXDC1ENSG00000179889.14chr16+150956321509571315092196150922621509804315098190-0.171000.000000.00001excludedHepG2U2AF1
SEPDXDC1ENSG00000179889.14chr16+150956321509571315092196150922621509804315098190-0.068000.000300.02349excludedHepG2NCBP2
SEPDXDC1ENSG00000179889.14chr16+150956321509571315092196150922621509804315098190-0.060000.001390.05403excludedHepG2MATR3
SEPDXDC1ENSG00000179889.14chr16+150956321509571315092196150922621509804315098190-0.099000.000020.00104excludedHepG2SRSF1
SEPDXDC1ENSG00000179889.14chr16+150956321509571315092196150922621509804315098190-0.081000.000900.06049excludedK562HNRNPUL1
SEPDXDC1ENSG00000179889.14chr16+151204991512056315116560151166111512273415122823-0.056000.000090.00396excludedK562AGGF1
SEPDXDC1ENSG00000179889.14chr16+150956321509571315092196150922621509804315098190-0.088000.002740.08554excludedK562PTBP1
A3SSPDXDC1ENSG00000179889.14chr16+1511094915111025151109761511102515109985151100700.096000.004240.02501longerK562AQR
RIPDXDC1ENSG00000179889.14chr16+151255911512683615125591151257631512671715126836-0.087000.000110.01876excludedK562APOBEC3C
RIPDXDC1ENSG00000179889.14chr16+1512559115126836151255911512576315126717151268360.101000.001110.00816includedK562PUS1
RIPDXDC1ENSG00000179889.14chr16+151255911512683615125591151257631512671715126836-0.062000.001110.06176excludedK562EIF4G2
RIPDXDC1ENSG00000179889.14chr16+151255911512683615125591151257631512671715126836-0.072000.000240.00276excludedHepG2U2AF2
RIPDXDC1ENSG00000179889.14chr16+1512559115126836151255911512576315126717151268360.142000.000010.00084includedHepG2UCHL5
RIPDXDC1ENSG00000179889.14chr16+1512559115126836151255911512576315126717151268360.068000.000000.00021includedHepG2TIA1
RIPDXDC1ENSG00000179889.14chr16+151255911512683615125591151257631512671715126836-0.092000.000020.00133excludedK562SRSF1
RIPDXDC1ENSG00000179889.14chr16+151255911512683615125591151257631512671715126836-0.066000.007660.07590excludedK562PRPF8
RIPDXDC1ENSG00000179889.14chr16+1512559115126836151255911512576315126717151268360.062000.000300.00968includedHepG2IGF2BP3
RIPDXDC1ENSG00000179889.14chr16+1512559115126836151255911512576315126717151268360.057000.000020.00048includedHepG2QKI
RIPDXDC1ENSG00000179889.14chr16+151255911512683615125591151257631512671715126836-0.096000.000970.07089excludedK562AARS
RIPDXDC1ENSG00000179889.14chr16+1512559115126836151255911512576315126717151268360.082000.000000.00001includedHepG2TAF15
RIPDXDC1ENSG00000179889.14chr16+1512559115126836151255911512576315126717151268360.085000.000000.00000includedHepG2G3BP1
RIPDXDC1ENSG00000179889.14chr16+151255911512683615125591151257631512671715126836-0.110000.000190.02432excludedK562XRCC6
RIPDXDC1ENSG00000179889.14chr16+1512559115126836151255911512576315126717151268360.079000.000050.00169includedHepG2FUBP3
RIPDXDC1ENSG00000179889.14chr16+1512559115126836151255911512576315126717151268360.110000.003250.08546includedK562TARDBP
RIPDXDC1ENSG00000179889.14chr16+151255911512683615125591151257631512671715126836-0.097000.000230.00566excludedK562FXR1
MXEPDXDC1ENSG00000179889.14chr16+15098043150981901510025015100440150921961509226215102635151027040.079000.000010.000571includedHepG2SRSF1
MXEPDXDC1ENSG00000179889.14chr16+1512049915120563151227341512282315116560151166111512380715123913-0.177000.004230.078282includedK562TARDBP
MXEPDXDC1ENSG00000179889.14chr16+15098043150981901510025015100440150921961509226215102635151027040.110000.000520.022521includedK562DDX55

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PDXDC1 is not avaliable on ENCORE database.