MYO5C

General Information

Gene Name       : MYO5C
Gene ID             : ENSG00000128833.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MYO5C)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MYO5CENSG00000128833.121.520.671.09ENCSR000AEF
HepG2MYO5CENSG00000128833.1211.4916.8014.14ENCSR985KAT
K562MYO5CENSG00000128833.120.010.000.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MYO5C is not avaliable on ENCORE database.



Proteins bound to RNA
  • MYO5C RNA is bound by 16 proteins.  







eCLIP assay for MYO5C is not avaliable on ENCORE database.





16 proteins are bound to MYO5C RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr155251578852515830-3'-UTR,CDS,intron-Distal3.263474.24070HepG2GRWD1
chr155255332252553387-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.303513.25678HepG2SF3B4
chr155254338452543522-3'-UTR,intron-Distal,intron-Proximal3.350665.64899HepG2KHSRP
chr155255325952553302-3'-UTR,5'-UTR,CDS,intron-Distal3.197463.79741HepG2GRWD1
chr155251337252513413-3'-UTR,CDS,intron-Distal4.922596.04243HepG2BCLAF1
chr155251078252510839-3'-UTR,CDS,intron-Distal5.190617.49561HepG2BCLAF1
chr155253750752537592-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.2059011.57027HepG2PRPF8
chr155253655452536595-3'-UTR,5'-UTR,CDS,intron-Distal3.170273.63043HepG2GRWD1
chr155250389252503946-3'-UTR,CDS,intron-Distal,intron-Proximal5.199006.69228HepG2PRPF8
chr155251713952517176-3'-UTR,CDS,intron-Distal,intron-Proximal4.246754.55323HepG2BUD13
chr155253661652536697-3'-UTR,5'-UTR,CDS,intron-Distal3.8839210.51189HepG2GRWD1
chr155253759152537662-3'-UTR,5'-UTR,CDS,intron-Distal3.216825.18023HepG2GRWD1
chr155252788552527923-3'-UTR,CDS,intron-Distal4.130084.45558HepG2GRWD1
chr155252481852524872-3'-UTR,CDS,intron-Distal,intron-Proximal3.507523.80299HepG2GRWD1
chr155251584352515911-3'-UTR,CDS,intron-Distal4.655556.01390HepG2GRWD1
chr155255325952553325-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.252895.41373HepG2PPIG
chr155250404452504080-3'-UTR,CDS,intron-Distal3.466294.45064HepG2GRWD1
chr155257497952575028-3'-UTR,5'-UTR,CDS,intron-Distal3.758776.15459HepG2GRWD1
chr155257497752575062-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.8389215.34957HepG2PPIG
chr155253821152538235-3'-UTR,5'-UTR,CDS,intron-Distal3.730903.31827HepG2GRWD1
chr155252481752524872-3'-UTR,CDS,intron-Distal,intron-Proximal3.676665.97823HepG2BCLAF1
chr155252129052521354-3'-UTR,CDS,intron-Distal,intron-Proximal4.5668511.57027HepG2PRPF8
chr155252787352527911-3'-UTR,CDS,intron-Distal3.267183.59112HepG2PPIG
chr155257497852575088-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.835194.12464HepG2UCHL5
chr155254361352543662-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.651555.97027HepG2GRWD1
chr155251710852517150-3'-UTR,CDS,intron-Distal4.194724.45558HepG2GRWD1
chr155248854652488592-3'-UTR,CDS,intron-Distal3.337604.02291HepG2GRWD1
chr155254340252543455-3'-UTR,intron-Distal3.392643.55754HepG2U2AF2
chr155254551352545584-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.5116910.57092HepG2BCLAF1
chr155251574852515773-3'-UTR,CDS,intron-Distal3.975663.56019HepG2GRWD1
chr155253906052539167-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.713986.23016HepG2PRPF8
chr155252134152521439-3'-UTR,CDS,intron-Distal,intron-Proximal3.867778.94272HepG2GRWD1
chr155254356352543646-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.5694810.40328HepG2BCLAF1
chr155254367952543713-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.482175.94293HepG2BCLAF1
chr155253811752538172-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.9202613.10719HepG2PRPF8
chr155253661952536701-3'-UTR,5'-UTR,CDS,intron-Distal4.0164010.05563HepG2BCLAF1
chr155257498152575041-3'-UTR,5'-UTR,CDS,intron-Distal3.116516.33024HepG2BCLAF1
chr155255640252556465-5'-UTR,CDS,intron-Distal4.241928.83457HepG2GRWD1
chr155255646752556492-5'-UTR,CDS,intron-Distal3.844364.17155HepG2BCLAF1
chr155256477652564826-5'-UTR,CDS,intron-Distal,intron-Proximal3.681656.81385HepG2BCLAF1
chr155256195352562044-5'-UTR,CDS,intron-Distal4.1320315.02931HepG2BCLAF1
chr155257111952571178-5'-UTR,CDS,intron-Distal3.045505.53494HepG2BCLAF1
chr155256191852561979-5'-UTR,CDS,intron-Distal,intron-Proximal4.263825.13777HepG2PRPF8
chr155255640152556467-5'-UTR,CDS,intron-Distal3.554109.86954HepG2BCLAF1
chr155258779552587941-5'-UTR,CDS,intron-Distal,intron-Proximal3.379533.94245HepG2DDX3X
chr155255634852556411-5'-UTR,CDS,intron-Distal,intron-Proximal3.373705.24055HepG2PRPF8
chr155257111952571195-5'-UTR,CDS,intron-Distal4.153199.05280HepG2GRWD1
chr155255639052556469-5'-UTR,CDS,intron-Distal4.2873211.24230HepG2PPIG
chr155250542052505484-CDS,intron-Distal,intron-Proximal3.410583.48848HepG2FXR2
chr155250541952505463-CDS,intron-Distal3.652284.65365HepG2GRWD1
chr155250534952505437-CDS,intron-Distal,intron-Proximal4.479045.93840HepG2PRPF8
chr155253425852534302-CDS,intron-Distal4.717046.03821HepG2GRWD1
chr155250619652506259-intron-Distal3.057664.30137HepG2PTBP1
chr155250612152506196-intron-Distal4.375784.07628HepG2PTBP1
chr155258131252581386-intron-Distal4.378094.43799HepG2CSTF2T
chr155254035452540414-intron-Distal4.941274.33458HepG2XPO5
chr155252382952523929-intron-Distal3.633077.65224HepG2PTBP1
chr155248668252486747-intron-Distal4.318463.50357HepG2QKI
chr155252462852524679-intron-Distal3.190813.00914HepG2PTBP1
chr155249335752493438-intron-Distal3.749706.25586HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MYO5C is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MYO5C is not available on ENCORE database.

  • 102 RBPs can affect the levels of MYO5C.  








The Knockdown/knockout RNA-Seq assay for MYO5C is not available on ENCORE database.





102 RBPs can affect the gene expression of MYO5C :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MYO5CENSG00000128833.8787.308501616.54600-1.0379021.3483020.01460HepG2ACO1
MYO5CENSG00000128833.8847.460701390.69060-0.714606.569205.78830HepG2AKAP1
MYO5CENSG00000128833.8826.473301150.71710-0.477503.671102.76880HepG2ASCC1
MYO5CENSG00000128833.81527.666802253.44350-0.5608012.8563011.57110HepG2AUH
MYO5CENSG00000128833.8835.382701349.07230-0.691506.418904.96510HepG2BCCIP
MYO5CENSG00000128833.8587.964501663.21280-1.5002036.8562035.11440HepG2BOP1
MYO5CENSG00000128833.81065.312201419.94770-0.414604.439603.49150HepG2CALR
MYO5CENSG00000128833.81502.506302118.14840-0.495403.530902.41620HepG2CCAR1
MYO5CENSG00000128833.81379.518801093.248400.335402.302501.59240HepG2CIRBP
MYO5CENSG00000128833.81019.150401616.41960-0.665409.066607.99580HepG2CKAP4
MYO5CENSG00000128833.81146.224701526.90130-0.413703.608202.83390HepG2CPSF6
MYO5CENSG00000128833.8751.606801442.60920-0.9406010.016408.06970HepG2CPSF7
MYO5CENSG00000128833.81074.08480833.275700.366102.603301.55580HepG2CSTF2
MYO5CENSG00000128833.81055.867501768.98860-0.7445017.4242016.08790HepG2CELF1
MYO5CENSG00000128833.81566.475301902.26400-0.280204.543003.62890HepG2DAZAP1
MYO5CENSG00000128833.81717.596101495.176800.200002.254201.49660HepG2DDX19B
MYO5CENSG00000128833.82023.476401338.621900.596007.806606.72510HepG2DDX21
MYO5CENSG00000128833.8814.160301332.25670-0.710507.189906.22660HepG2DDX3X
MYO5CENSG00000128833.8851.557701326.43170-0.639405.633504.57750HepG2DDX55
MYO5CENSG00000128833.81021.340701733.91470-0.763604.983103.68560HepG2DDX59
MYO5CENSG00000128833.8463.931101144.24690-1.3024015.5639014.25960HepG2DDX6
MYO5CENSG00000128833.82031.074501546.654600.393006.297005.35420HepG2DKC1
MYO5CENSG00000128833.8571.298501118.90420-0.9698020.7722019.03780HepG2DNAJC21
MYO5CENSG00000128833.8845.964101109.01720-0.390605.320404.45950HepG2DNAJC2
MYO5CENSG00000128833.8734.151301100.18010-0.583605.062904.27410HepG2EIF2S1
MYO5CENSG00000128833.8671.153401030.42310-0.618505.042003.84910HepG2EIF3D
MYO5CENSG00000128833.81585.091201263.699200.326802.956801.84510HepG2EIF3G
MYO5CENSG00000128833.81501.752601876.55630-0.321404.538603.50930HepG2EIF4G1
MYO5CENSG00000128833.81043.668101797.64670-0.7844011.7121010.11100HepG2EIF4G2
MYO5CENSG00000128833.82052.575401517.229200.435904.744503.35400HepG2ESF1
MYO5CENSG00000128833.81217.082601579.85390-0.376403.648402.68960HepG2EWSR1
MYO5CENSG00000128833.8730.43630920.80360-0.334102.610501.47720HepG2FAM120A
MYO5CENSG00000128833.81363.755801768.27490-0.374802.162501.47800HepG2FIP1L1
MYO5CENSG00000128833.8888.04730672.226300.401603.202402.36080HepG2FUBP3
MYO5CENSG00000128833.81169.204601599.71300-0.452302.653701.55800HepG2FUS
MYO5CENSG00000128833.81655.872201226.536600.432903.526102.75090HepG2FXR1
MYO5CENSG00000128833.81560.605701207.877200.369502.758401.86980HepG2G3BP2
MYO5CENSG00000128833.81038.383401543.47510-0.571808.904307.27690HepG2HDGF
MYO5CENSG00000128833.81406.254801129.623600.315902.382701.77950HepG2HNRNPA1
MYO5CENSG00000128833.81318.017801748.15460-0.407506.346205.03020HepG2HNRNPA2B1
MYO5CENSG00000128833.8840.492601256.49510-0.580106.276105.26460HepG2HNRNPC
MYO5CENSG00000128833.81173.707301455.98400-0.310903.955103.11310HepG2HNRNPF
MYO5CENSG00000128833.8611.140301151.92690-0.9145012.4088011.03280HepG2HNRNPK
MYO5CENSG00000128833.8808.709201732.86760-1.0995044.0585041.77540HepG2HNRNPL
MYO5CENSG00000128833.81287.215301651.74890-0.359702.699502.07620HepG2HNRNPLL
MYO5CENSG00000128833.81050.731401248.18810-0.248402.358001.79490HepG2HNRNPU
MYO5CENSG00000128833.8868.028601156.73970-0.414202.992602.29470HepG2IGF2BP2
MYO5CENSG00000128833.81113.985201274.98320-0.194702.138301.48440HepG2ILF2
MYO5CENSG00000128833.81101.337201477.86560-0.424304.619903.31010HepG2KIF1C
MYO5CENSG00000128833.81563.039602235.55160-0.516303.914902.92290HepG2LARP4
MYO5CENSG00000128833.8882.527601276.24840-0.532205.860204.22580HepG2LARP7
MYO5CENSG00000128833.81590.663401226.963600.374402.680402.03480HepG2MAGOH
MYO5CENSG00000128833.8681.185701078.48030-0.662903.813902.58440HepG2METAP2
MYO5CENSG00000128833.8797.795101202.02930-0.591405.675603.94780HepG2NAA15
MYO5CENSG00000128833.81208.493101886.27210-0.6423012.0919010.54500HepG2NOL12
MYO5CENSG00000128833.8386.07950548.07750-0.505502.050201.30170HepG2PABPC1
MYO5CENSG00000128833.81040.737101235.49530-0.247502.319101.53660HepG2PARN
MYO5CENSG00000128833.81498.186701144.652000.388205.476204.66860HepG2PCBP1
MYO5CENSG00000128833.81121.207501514.37930-0.433702.341701.38330HepG2PCBP2
MYO5CENSG00000128833.8925.617501800.56550-0.9600019.2202017.83750HepG2PUF60
MYO5CENSG00000128833.81072.494001911.32540-0.8336030.4771028.93640HepG2PUM1
MYO5CENSG00000128833.81070.339401909.96310-0.8355018.0748016.45490HepG2PUM2
MYO5CENSG00000128833.81951.628801646.589900.245102.573201.97320HepG2PUS1
MYO5CENSG00000128833.8701.027001461.46060-1.059908.465107.27450HepG2RAVER1
MYO5CENSG00000128833.81192.574601975.75010-0.7283013.8832012.19250HepG2RBM15
MYO5CENSG00000128833.81131.582902162.50220-0.9344026.6818025.40310HepG2RBM22
MYO5CENSG00000128833.8918.895201144.82600-0.317202.180201.57560HepG2RBM25
MYO5CENSG00000128833.81789.675401296.228900.465307.703006.88070HepG2NELFE
MYO5CENSG00000128833.81956.803601207.263800.6967017.1517015.83290HepG2RECQL
MYO5CENSG00000128833.81017.442501568.59850-0.624508.394207.30420HepG2RPLP0
MYO5CENSG00000128833.8638.113001002.58250-0.651806.128305.25430HepG2RPS19
MYO5CENSG00000128833.8949.01730602.132700.656304.658703.62270HepG2RPS3A
MYO5CENSG00000128833.8648.778601012.11510-0.641605.348104.28780HepG2RRP9
MYO5CENSG00000128833.8709.970001111.56800-0.6468012.3592011.14570HepG2SAFB2
MYO5CENSG00000128833.81415.746201954.88580-0.465503.127602.41130HepG2SF3A3
MYO5CENSG00000128833.81148.963101634.87560-0.508805.374504.41420HepG2SF3B1
MYO5CENSG00000128833.81059.749801296.27840-0.290703.727102.99890HepG2SMN1
MYO5CENSG00000128833.8943.894301489.87080-0.658505.206403.86650HepG2SMNDC1
MYO5CENSG00000128833.8986.476001819.09640-0.882907.585806.28440HepG2SNRNP70
MYO5CENSG00000128833.81910.947702442.44550-0.354006.320305.64720HepG2SRFBP1
MYO5CENSG00000128833.81590.156901265.723400.329104.293703.73620HepG2SRSF1
MYO5CENSG00000128833.81046.502201759.21570-0.749407.247705.56540HepG2SRSF3
MYO5CENSG00000128833.81012.122901777.73100-0.8127022.2767020.73480HepG2SRSF5
MYO5CENSG00000128833.81039.075701430.49010-0.461207.605106.54440HepG2SRSF7
MYO5CENSG00000128833.8682.949601029.73450-0.592409.789808.86220HepG2SRSF9
MYO5CENSG00000128833.82487.956502120.584000.230402.928002.40410HepG2SSB
MYO5CENSG00000128833.8954.549601365.75650-0.516802.856101.63320HepG2SUB1
MYO5CENSG00000128833.81727.747502021.82560-0.226803.168602.51190HepG2SUCLG1
MYO5CENSG00000128833.8929.124201194.46280-0.362402.153301.31770HepG2SUPT6H
MYO5CENSG00000128833.8986.751301320.42210-0.420202.900602.21060HepG2SUPV3L1
MYO5CENSG00000128833.81431.777701137.685300.331603.529902.91030HepG2TAF15
MYO5CENSG00000128833.81679.30070958.728400.808604.267402.96020HepG2TBRG4
MYO5CENSG00000128833.8625.59400885.02030-0.500503.915402.75240HepG2TFIP11
MYO5CENSG00000128833.8659.527101223.68940-0.8917022.4138021.00830HepG2TRIM56
MYO5CENSG00000128833.8810.780801512.93570-0.9000010.149408.92990HepG2U2AF1
MYO5CENSG00000128833.8784.471702188.12610-1.479902.738601.75450HepG2U2AF2
MYO5CENSG00000128833.8338.97150780.00010-1.2023016.5661014.73850HepG2UCHL5
MYO5CENSG00000128833.81078.698601733.68590-0.6846016.9969015.55450HepG2UPF1
MYO5CENSG00000128833.8669.650901209.04880-0.852407.076905.42920HepG2UPF2
MYO5CENSG00000128833.81457.902201781.97830-0.289603.343402.20530HepG2UTP18
MYO5CENSG00000128833.8907.845901673.80390-0.8826024.6291023.11180HepG2UTP3
MYO5CENSG00000128833.81054.877401906.72110-0.8540031.6665030.33430HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MYO5C is not available on ENCORE database.





9 RBPs can affect the splicing of MYO5C :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMYO5CENSG00000128833.8chr15-5253990852539973525396545253978952540896525409800.193000.000030.00099includedHepG2U2AF1
SEMYO5CENSG00000128833.8chr15-525639595256404152561949525620575256477652564920-0.311000.000290.00729excludedHepG2U2AF1
SEMYO5CENSG00000128833.8chr15-525639595256404152561949525620575256477652564920-0.649000.000000.00000excludedHepG2HNRNPK
SEMYO5CENSG00000128833.8chr15-5253990852539973525396545253978952540896525409800.330000.000090.00185includedHepG2U2AF2
SEMYO5CENSG00000128833.8chr15-525396545253978952539113525392115254089652540980-0.272000.002300.02824excludedHepG2U2AF2
SEMYO5CENSG00000128833.8chr15-525639595256404152561949525620575256477652564920-0.325000.000830.01212excludedHepG2U2AF2
SEMYO5CENSG00000128833.8chr15-5255738252557417525563865255649352561949525620570.115000.000300.02552includedHepG2FTO
SEMYO5CENSG00000128833.8chr15-525639595256404152561949525620575256477652564920-0.383000.001610.09483excludedHepG2HNRNPL
SEMYO5CENSG00000128833.8chr15-525639595256404152561949525620575256477652564920-0.228000.000490.08966excludedHepG2PRPF4
A3SSMYO5CENSG00000128833.8chr15-5249724452497440524972445249734452498012524980990.055000.001050.07314longerHepG2SF3A3
MXEMYO5CENSG00000128833.8chr15-52539654525397195253984452539970525391135253921152540896525409800.614000.000000.000151includedHepG2U2AF1
MXEMYO5CENSG00000128833.8chr15-52539654525397195253984452539973525391135253921152540896525409800.668000.000000.000011includedHepG2U2AF1
MXEMYO5CENSG00000128833.8chr15-52539654525397895253984452539970525391135253921152540896525409800.351000.000000.000001includedHepG2U2AF1
MXEMYO5CENSG00000128833.8chr15-52539654525397895253984452539973525391135253921152540896525409800.406000.000000.000001includedHepG2U2AF1
MXEMYO5CENSG00000128833.8chr15-5253192952532076525342445253441052529678525298435253655252536764-0.197000.005510.077902includedHepG2U2AF1
MXEMYO5CENSG00000128833.8chr15-5250075052500840525039265250408152498012524981635250538452505483-0.304000.001400.027512includedHepG2U2AF1
MXEMYO5CENSG00000128833.8chr15-5253192952532076525342445253432652529678525298435253655252536764-0.053000.005190.049442includedHepG2SFPQ
MXEMYO5CENSG00000128833.8chr15-5252132952521510525248185252488252517635525177295252786652527960-0.197000.000000.000052includedHepG2SFPQ
MXEMYO5CENSG00000128833.8chr15-52539654525397895253984452539973525391135253921152540896525409800.353000.001170.009231includedHepG2U2AF2
MXEMYO5CENSG00000128833.8chr15-5252132952521510525248185252488252517635525177295252786652527960-0.132000.000980.034252includedHepG2RBFOX2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MYO5C is not avaliable on ENCORE database.