PALMD

General Information

Gene Name       : PALMD
Gene ID             : ENSG00000099260.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PALMD)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PALMDENSG00000099260.100.000.010.01ENCSR000AEF
HepG2PALMDENSG00000099260.1010.8118.5414.68ENCSR985KAT
K562PALMDENSG00000099260.105.708.186.94ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PALMD is not avaliable on ENCORE database.



Proteins bound to RNA
  • PALMD RNA is bound by 4 proteins.  







eCLIP assay for PALMD is not avaliable on ENCORE database.





4 proteins are bound to PALMD RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1100133202100133340+CDS,intron-Proximal3.676894.52024HepG2PPIG
chr1100133195100133326+CDS,intron-Proximal3.991345.65086HepG2BCLAF1
chr1100154775100154948+CDS4.865245.35719HepG2GRWD1
chr1100154853100154919+CDS3.448824.56058HepG2BCLAF1
chr1100149387100149463+intron-Distal4.248374.52538HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PALMD is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PALMD is not available on ENCORE database.

  • 144 RBPs can affect the levels of PALMD.  








The Knockdown/knockout RNA-Seq assay for PALMD is not available on ENCORE database.





144 RBPs can affect the gene expression of PALMD :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PALMDENSG00000099260.62364.62460743.359901.6694018.3069016.27720HepG2ABCF1
PALMDENSG00000099260.6938.28120412.089601.1870030.7442029.23910HepG2ACO1
PALMDENSG00000099260.6663.61270463.299500.518303.409402.31060HepG2ADAR
PALMDENSG00000099260.6163.88610762.60030-2.2182015.9844014.81520HepG2AKAP1
PALMDENSG00000099260.6729.03920414.016500.816209.246007.94440HepG2AKAP8L
PALMDENSG00000099260.61141.43440671.099800.7661010.460507.98390HepG2ATP5C1
PALMDENSG00000099260.6830.95790443.338800.906309.174907.66310HepG2BCLAF1
PALMDENSG00000099260.6698.428501408.05550-1.011504.878704.11290HepG2BOP1
PALMDENSG00000099260.6891.22610557.102200.677708.102406.10900HepG2BUD13
PALMDENSG00000099260.6487.14950900.10570-0.885707.856206.19870HepG2CCAR1
PALMDENSG00000099260.61618.09660599.505201.4324029.6141027.47860HepG2CIRBP
PALMDENSG00000099260.6710.96720411.989000.7871013.0413011.81430HepG2CKAP4
PALMDENSG00000099260.6514.897701292.73220-1.328107.315406.23950HepG2CPSF6
PALMDENSG00000099260.6597.60530475.114400.330802.286301.36250HepG2YBX3
PALMDENSG00000099260.6430.33320315.150500.449302.494501.46920HepG2CSTF2
PALMDENSG00000099260.6722.01040594.450800.280402.144301.56740HepG2CELF1
PALMDENSG00000099260.61060.57520381.118701.4764052.3128049.89260HepG2DDX19B
PALMDENSG00000099260.6702.10640475.764500.561305.812004.19380HepG2DDX1
PALMDENSG00000099260.61135.63730472.225001.2659023.8725022.15780HepG2DDX21
PALMDENSG00000099260.6749.19090461.989600.697407.586506.08650HepG2DDX24
PALMDENSG00000099260.61093.09230469.379201.2195010.722908.46360HepG2DDX27
PALMDENSG00000099260.6619.95160253.714501.2888011.297808.96000HepG2DDX47
PALMDENSG00000099260.6513.42470337.309500.606004.953103.19820HepG2DDX52
PALMDENSG00000099260.6789.54760501.665600.654204.620103.64820HepG2DDX55
PALMDENSG00000099260.61146.13580645.387300.828404.332803.07790HepG2DDX5
PALMDENSG00000099260.6326.12650627.40620-0.944003.301602.63350HepG2DDX6
PALMDENSG00000099260.6589.93650449.953400.390702.496901.56400HepG2DHX30
PALMDENSG00000099260.61985.48350394.255202.33220132.06900129.48330HepG2DKC1
PALMDENSG00000099260.6241.16000466.50860-0.9519011.228909.89100HepG2DNAJC21
PALMDENSG00000099260.6665.00700462.415500.524104.239703.46480HepG2DNAJC2
PALMDENSG00000099260.61224.57930402.481201.6052026.1611023.88860HepG2EEF2
PALMDENSG00000099260.6640.65470335.556300.932909.779207.73160HepG2EFTUD2
PALMDENSG00000099260.6850.75570564.052800.592806.509104.78750HepG2EIF2S2
PALMDENSG00000099260.6624.61200326.742000.934709.351407.78680HepG2EIF3D
PALMDENSG00000099260.61215.30540445.860901.4466035.3558032.51320HepG2EIF3G
PALMDENSG00000099260.61087.94190666.839200.706106.527205.54410HepG2EIF4A3
PALMDENSG00000099260.6861.54360649.088600.408401.991401.40120HepG2EIF4B
PALMDENSG00000099260.61643.69210630.586801.3821051.4914048.83930HepG2EIF4G1
PALMDENSG00000099260.61231.24330644.066800.9347014.0295011.89800HepG2ESF1
PALMDENSG00000099260.61110.01250876.553300.340603.625402.95150HepG2ETF1
PALMDENSG00000099260.6721.33880402.675300.8410010.262408.69040HepG2EWSR1
PALMDENSG00000099260.6436.17010291.992700.578903.851502.45080HepG2FAM120A
PALMDENSG00000099260.6301.09540449.95120-0.579504.250702.87760HepG2FASTKD2
PALMDENSG00000099260.6502.346001294.82210-1.366007.695106.00450HepG2FTO
PALMDENSG00000099260.6584.83950406.179700.525804.004803.06630HepG2FUBP3
PALMDENSG00000099260.6287.11520624.02240-1.120004.978404.09750HepG2G3BP1
PALMDENSG00000099260.61257.41840662.291300.9248012.4233010.53970HepG2G3BP2
PALMDENSG00000099260.6636.90330290.926501.1303010.369608.70870HepG2GEMIN5
PALMDENSG00000099260.6522.50050395.062400.403302.364701.42640HepG2GNB2L1
PALMDENSG00000099260.6548.05210366.716900.579503.622101.46160HepG2GRWD1
PALMDENSG00000099260.61013.55300513.196600.981707.135304.83150HepG2HLTF
PALMDENSG00000099260.61137.12330470.978201.2716017.3900015.99790HepG2HNRNPA1
PALMDENSG00000099260.6751.84710587.411100.356003.102702.12010HepG2HNRNPA2B1
PALMDENSG00000099260.6830.438701108.94560-0.417205.143904.20300HepG2HNRNPF
PALMDENSG00000099260.63167.331801398.613601.1792022.5414021.01900HepG2HNRNPLL
PALMDENSG00000099260.61241.38850518.035901.2607027.8928025.50650HepG2HNRNPM
PALMDENSG00000099260.6370.17560595.10950-0.684902.266201.38290HepG2IGF2BP3
PALMDENSG00000099260.61030.48250637.958200.691705.345503.90870HepG2KHSRP
PALMDENSG00000099260.6518.67390349.687200.568704.393302.33790HepG2CCAR2
PALMDENSG00000099260.6510.97110376.694700.439703.940202.72710HepG2KIF1C
PALMDENSG00000099260.61475.73650950.381400.634805.071603.93420HepG2LARP4
PALMDENSG00000099260.6568.33940388.296100.549503.504001.58290HepG2LSM11
PALMDENSG00000099260.61419.44970672.772101.0770015.9586014.44570HepG2MAGOH
PALMDENSG00000099260.6534.58330327.758400.705705.737503.47250HepG2MARK2
PALMDENSG00000099260.6525.70970341.976900.620302.466501.47120HepG2METAP2
PALMDENSG00000099260.6967.41610607.715200.670608.184906.86200HepG2MSI2
PALMDENSG00000099260.6813.76570510.257000.673307.743605.74670HepG2NAA15
PALMDENSG00000099260.6534.41530349.940900.610804.529402.70970HepG2NIP7
PALMDENSG00000099260.6913.07270460.685100.986806.346804.65860HepG2NONO
PALMDENSG00000099260.62073.077901240.018000.741306.134605.04680HepG2NSUN2
PALMDENSG00000099260.6390.45170244.286900.676503.143801.44290HepG2PA2G4
PALMDENSG00000099260.61259.73280622.768201.0163027.0705025.50550HepG2PCBP1
PALMDENSG00000099260.6851.46730506.883900.748205.216603.82010HepG2PCBP2
PALMDENSG00000099260.6466.72930270.204400.788407.660005.69490HepG2PKM
PALMDENSG00000099260.6743.74860464.172100.680108.962107.68040HepG2PPIL4
PALMDENSG00000099260.61151.74950684.564100.750506.773505.62420HepG2PRPF4
PALMDENSG00000099260.6812.63270386.967901.0703012.3923010.85450HepG2PRPF8
PALMDENSG00000099260.61567.71700633.714001.3067045.7875044.14310HepG2PTBP1
PALMDENSG00000099260.6750.26830605.007200.310401.917501.40830HepG2PUF60
PALMDENSG00000099260.6365.76080642.25230-0.8122012.8220011.74400HepG2PUM1
PALMDENSG00000099260.6318.73660641.77670-1.0097013.5238012.10950HepG2PUM2
PALMDENSG00000099260.62245.35090419.738302.41930169.81110166.66190HepG2PUS1
PALMDENSG00000099260.61129.40830686.276600.718604.809304.01920HepG2QKI
PALMDENSG00000099260.6723.40420489.155700.564402.550801.87350HepG2RAVER1
PALMDENSG00000099260.6949.49180650.539600.545402.633301.79460HepG2RBM15
PALMDENSG00000099260.6251.32420732.63800-1.5436031.5435030.16840HepG2RBM22
PALMDENSG00000099260.61019.17990622.859500.710309.261308.08200HepG2RBM25
PALMDENSG00000099260.6763.83810487.760200.647003.861001.40500HepG2RBM34
PALMDENSG00000099260.61664.32560754.449401.141304.025002.02320HepG2RBM39
PALMDENSG00000099260.6793.22750378.948801.0656011.512809.38920HepG2RCC2
PALMDENSG00000099260.61562.95630705.242801.1480018.1108016.96170HepG2NELFE
PALMDENSG00000099260.6838.10120656.874100.351403.289502.62510HepG2RECQL
PALMDENSG00000099260.62044.320301194.549900.7751012.2812011.02310HepG2RPLP0
PALMDENSG00000099260.6933.03340480.498200.957307.900306.37770HepG2RPS10
PALMDENSG00000099260.6899.44800317.919101.5003030.0808028.42050HepG2RPS19
PALMDENSG00000099260.6866.73750430.396801.0098012.9535011.32150HepG2RPS2
PALMDENSG00000099260.6504.19730167.154701.5927015.1877013.37310HepG2RPS3A
PALMDENSG00000099260.6619.44830439.329300.495603.396802.20410HepG2RPS5
PALMDENSG00000099260.6848.34160382.788801.1480013.0289011.53380HepG2RRP9
PALMDENSG00000099260.6768.16280319.105401.2673018.1216015.87130HepG2SERBP1
PALMDENSG00000099260.61267.14390620.174301.0307010.839409.44010HepG2SF3A3
PALMDENSG00000099260.6821.94400659.734900.317102.713602.12730HepG2SF3B4
PALMDENSG00000099260.6973.30230580.129100.7464015.1256013.72140HepG2SLBP
PALMDENSG00000099260.6746.54750540.455200.466005.712004.84060HepG2SMN1
PALMDENSG00000099260.61610.11200827.490600.9602029.7187028.52880HepG2SRFBP1
PALMDENSG00000099260.61457.23040688.638001.0813031.9136030.69110HepG2SRSF1
PALMDENSG00000099260.6854.962101489.39740-0.800803.901802.68970HepG2SRSF3
PALMDENSG00000099260.6876.186101089.48950-0.314303.159002.42090HepG2SRSF7
PALMDENSG00000099260.62457.65760718.462701.77420107.14260105.19340HepG2SSB
PALMDENSG00000099260.61542.84710679.362401.1832043.8126041.86530HepG2SUCLG1
PALMDENSG00000099260.6644.30550507.036100.345602.601701.68920HepG2SUPT6H
PALMDENSG00000099260.61015.30550499.392601.0236011.123709.91840HepG2SUPV3L1
PALMDENSG00000099260.6754.56430619.023600.285502.097101.59630HepG2TAF15
PALMDENSG00000099260.6932.72430441.537501.078806.408004.86030HepG2TBRG4
PALMDENSG00000099260.6528.33250334.720700.658404.276403.07330HepG2TFIP11
PALMDENSG00000099260.6375.27530568.74650-0.599805.214604.08120HepG2TIA1
PALMDENSG00000099260.61151.57410505.653101.1873018.5414017.45820HepG2TIAL1
PALMDENSG00000099260.61449.24900642.242001.1740014.6316013.14790HepG2U2AF1
PALMDENSG00000099260.6203.22480295.00130-0.537602.647201.90580HepG2UCHL5
PALMDENSG00000099260.6859.78650457.270500.910807.134305.47400HepG2UPF2
PALMDENSG00000099260.61024.48930491.597501.0593013.2505011.68510HepG2XRN2
PALMDENSG00000099260.6996.85950604.894600.7206014.5484013.53820HepG2ZNF622
PALMDENSG00000099260.6218.22770141.495500.625002.890401.68030K562AARS
PALMDENSG00000099260.6278.66230503.52250-0.853507.690905.67640K562ABCF1
PALMDENSG00000099260.6195.54830260.47580-0.413601.998201.50080K562AGGF1
PALMDENSG00000099260.6178.06260286.18240-0.684604.342903.05090K562AKAP8
PALMDENSG00000099260.6172.23620271.02670-0.654002.321301.72160K562AKAP8L
PALMDENSG00000099260.6115.46250245.56410-1.088704.138203.44870K562AQR
PALMDENSG00000099260.6284.66040385.71400-0.438302.108901.35360K562BOP1
PALMDENSG00000099260.6486.15750311.315700.642905.134003.48560K562CCDC124
PALMDENSG00000099260.6225.77090413.45080-0.872904.627503.21080K562CNOT7
PALMDENSG00000099260.6161.71090410.11670-1.3426015.7804013.87090K562CPSF6
PALMDENSG00000099260.6330.25970506.58090-0.617204.803703.50620K562CELF1
PALMDENSG00000099260.6438.85130305.608600.521903.034201.49170K562DDX19B
PALMDENSG00000099260.6569.52070371.716300.615406.380705.44910K562DDX47
PALMDENSG00000099260.6123.75430243.25550-0.975007.125106.04960K562EIF2S2
PALMDENSG00000099260.669.77020122.84240-0.816102.976802.12680K562EIF4A3
PALMDENSG00000099260.6301.17840412.01740-0.452102.454901.56540K562EIF4G2
PALMDENSG00000099260.6169.05100361.93270-1.098309.795408.08990K562FIP1L1
PALMDENSG00000099260.6233.83480353.70560-0.597103.320502.31190K562FTO
PALMDENSG00000099260.6117.95260191.07970-0.696003.226101.65530K562G3BP1
PALMDENSG00000099260.6132.45880221.18660-0.739704.252202.84640K562GLRX3
PALMDENSG00000099260.6141.56120324.14920-1.1952010.310308.82770K562GRSF1
PALMDENSG00000099260.6231.10780154.962600.576502.597002.01590K562HNRNPC
PALMDENSG00000099260.6239.53120136.624800.809905.104302.57560K562HNRNPH1
PALMDENSG00000099260.6456.97500335.936000.443802.806201.74170K562HNRNPL
PALMDENSG00000099260.6298.64320153.590400.959208.046206.52770K562HNRNPU
PALMDENSG00000099260.6109.08750199.71870-0.872503.838702.55260K562IGF2BP2
PALMDENSG00000099260.694.14550210.05470-1.157804.118503.08750K562MAGOH
PALMDENSG00000099260.6163.59020382.20330-1.2243012.0653010.16010K562METAP2
PALMDENSG00000099260.6137.39660232.54510-0.759204.593503.57310K562MTPAP
PALMDENSG00000099260.6187.06020122.665500.608702.544301.36750K562NCBP2
PALMDENSG00000099260.6144.34540258.39940-0.840106.188805.13390K562NSUN2
PALMDENSG00000099260.6267.07730410.85210-0.621404.226003.18260K562PPIG
PALMDENSG00000099260.6692.53680478.138600.534404.747003.31640K562PUM1
PALMDENSG00000099260.691.60050268.85650-1.5534012.3533011.25240K562PUS1
PALMDENSG00000099260.6147.78510261.90020-0.825505.508704.69740K562RBM15
PALMDENSG00000099260.687.90080195.76470-1.155206.224404.89870K562RBM22
PALMDENSG00000099260.6123.74730205.99080-0.735203.449302.20870K562NELFE
PALMDENSG00000099260.6260.21650105.754101.298908.300806.87430K562RPS19
PALMDENSG00000099260.6151.10820254.94310-0.754604.939203.87660K562SF3A3
PALMDENSG00000099260.6188.63470261.19190-0.469502.436301.55200K562SRPK2
PALMDENSG00000099260.6316.08160200.038400.659902.388501.72330K562SRSF1
PALMDENSG00000099260.6127.83340202.49020-0.663602.900902.17640K562TARDBP
PALMDENSG00000099260.6152.47370272.51930-0.837803.383301.90100K562UTP18
PALMDENSG00000099260.6342.82220243.774700.491803.311202.39330K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PALMD is not available on ENCORE database.






No RBPs affect the alternative splcing events of PALMD on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PALMD is not avaliable on ENCORE database.