CAT

General Information

Gene Name       : CAT
Gene ID             : ENSG00000121691.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CAT)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CATENSG00000121691.527.9426.3827.16ENCSR000AEF
HepG2CATENSG00000121691.553.2772.6562.96ENCSR985KAT
K562CATENSG00000121691.591.38108.68100.03ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq CAT-BGKcLV26-K562ENCSR667JRKCATK562ReleasedENCSR900GQL   CRISPRKD% = 66.3,71.8
knockdown followed by RNA-seq CAT-BGHcLV27-HepG2ENCSR051BQFCATHepG2ReleasedENCSR650TTU   CRISPRKD% = 53.3,56.0






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
CATENCAB661IMUA304-767A1Released, ENCODE4BGHcLV27-43, Released, ENCODE4BGKcLV26-61, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
CATK562CRISPRENCSR667JRKENCSR900GQLCAT-BGKcLV26-61,CAT-BGKcLV26-62NT-BGKcLV26-1,NT-BGKcLV26-266.3,71.8ReleasedENCODE4
CATHepG2CRISPRENCSR051BQFENCSR650TTUCAT-BGHcLV27-43,CAT-BGHcLV27-44NT-BGHcLV27-1,NT-BGHcLV27-253.3,56.0ReleasedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
CATProduct_ID: A304-767A
Lot_ID: 1
Source: Bethyl Labs
Target Name: CAT-human		 CAT-HEPG2-CRISPR-A304-767A.png<br>Caption: Western blot following CRISPR against CAT in HepG2 whole cell lysate using CAT specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against CAT. CAT protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
 Bethyl_A304-767A_1_CAT.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the CAT specific antibody, A304-767A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the CAT-specific antibody, A304-767A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 CAT-K562-CRISPR-A304-767A.png<br>Caption: Western blot following CRISPR against CAT in K562 whole cell lysate using CAT specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against CAT. CAT protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for CAT is not avaliable on ENCORE database.



Proteins bound to RNA
  • CAT RNA is bound by 29 proteins.  







eCLIP assay for CAT is not avaliable on ENCORE database.





29 proteins are bound to CAT RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr113449337834493462+3'-UTR4.349964.38976HepG2ZC3H11A
chr113449339434493480+3'-UTR4.946178.49227K562IGF2BP1
chr113449350534493578+3'-UTR3.9175710.43661K562PABPC4
chr113449301034493040+3'-UTR5.472515.13703HepG2SUB1
chr113449350534493579+3'-UTR4.551515.80303K562IGF2BP1
chr113449304934493095+3'-UTR4.048517.38140HepG2SUB1
chr113449303334493109+3'-UTR3.437763.63087K562NOLC1
chr113446049034460548+5'-UTR4.144663.84644HepG2NCBP2
chr113446049934460587+5'-UTR,CDS3.578946.05689K562GEMIN5
chr113448985534489935+CDS3.532588.93089K562ZNF622
chr113448989734489955+CDS,intron-Proximal3.676894.52024HepG2PPIG
chr113449292934492977+CDS3.941833.15006K562RBM15
chr113448289534482938+CDS,intron-Proximal3.0688213.36628K562YBX3
chr113447085034470910+CDS4.204193.35081HepG2G3BP1
chr113447535234475403+CDS3.490173.20659K562SND1
chr113449250534492553+CDS3.327186.42235K562LIN28B
chr113448569334485783+CDS,intron-Proximal3.189484.85261K562DDX24
chr113447820334478269+CDS,intron-Proximal3.0410711.58037K562BUD13
chr113448984034489903+CDS3.514454.22242HepG2G3BP1
chr113449245534492568+CDS,intron-Proximal3.725574.90219HepG2AQR
chr113447463634474657+CDS,intron-Proximal3.335956.76685K562YBX3
chr113447533734475404+CDS,intron-Proximal3.465484.11767K562U2AF2
chr113446060334460651+CDS,intron-Proximal4.641265.35117HepG2PRPF8
chr113447817934478249+CDS,intron-Proximal3.221838.11691K562AQR
chr113447253434472641+CDS,intron-Proximal3.319964.32134HepG2G3BP1
chr113447534234475404+CDS,intron-Proximal3.070723.88217HepG2U2AF2
chr113449256834492624+CDS,intron-Proximal4.507525.25202HepG2AQR
chr113448565134485659+CDS,intron-Proximal3.410343.50044K562YBX3
chr113447362334473664+CDS,intron-Proximal4.662155.91379K562SND1
chr113447814134478263+CDS,intron-Proximal3.3576211.06697K562EFTUD2
chr113447772434477749+CDS3.328133.34065K562IGF2BP1
chr113448279734482860+CDS,intron-Proximal3.730984.32261K562IGF2BP2
chr113447821134478259+CDS,intron-Proximal3.094973.90285K562IGF2BP1
chr113448993434489943+CDS,intron-Proximal3.099065.39816K562LIN28B
chr113447536134475399+CDS3.167154.44630K562ZNF622
chr113447261634472645+CDS4.541784.89631K562SND1
chr113447830834478421+CDS,intron-Proximal3.6213910.10040K562PRPF8
chr113448286834482933+CDS3.663953.59112HepG2PPIG
chr113447465234474663+CDS3.996163.28461K562BUD13
chr113447763634477683+CDS3.424547.83494K562RPS3
chr113447082634470904+CDS3.165305.07457HepG2BCLAF1
chr113447536034475411+CDS3.904923.11282HepG2G3BP1
chr113447835034478422+CDS,intron-Proximal4.8823032.72052HepG2PRPF8
chr113448989234489934+CDS3.225805.79197K562LIN28B
chr113447816134478257+CDS,intron-Proximal4.5736925.20198K562SF3B4
chr113447764734477695+CDS3.275874.63145K562BUD13
chr113447836334478380+CDS,intron-Proximal3.367003.47888K562SF3B4
chr113448284134482895+CDS3.2474312.72552K562YBX3
chr113447836334478380+CDS,intron-Proximal4.743369.04436K562AQR
chr113448568034485731+CDS3.986056.07436K562IGF2BP2
chr113447830634478350+CDS4.1057214.10870HepG2PRPF8
chr113448201134482070+intron-Distal3.963044.39658K562HNRNPC
chr113447216334472252+intron-Distal4.893085.39854K562PTBP1
chr113446116234461225+intron-Distal4.105604.48935K562CSTF2T
chr113447335334473446+intron-Distal4.123973.02234K562KHSRP
chr113447810834478210+intron-Distal,intron-Proximal4.515993.42844K562KHSRP
chr113447838034478405+intron-Proximal4.009704.42765K562SF3B4
chr113448994534489991+intron-Proximal5.430987.63570K562AQR
chr113448274834482795+intron-Proximal4.845676.88762HepG2SF3A3
chr113447837134478412+intron-Proximal4.960497.20266K562BUD13
chr113448995134489995+intron-Proximal5.127476.35567HepG2PRPF8
chr113447775834477821+intron-Proximal4.360596.99120K562AQR
chr113449258834492633+intron-Proximal4.929355.17615K562AQR
chr113447838034478407+intron-Proximal5.0663113.23057K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CAT is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CAT is not available on ENCORE database.

  • 143 RBPs can affect the levels of CAT.  








The Knockdown/knockout RNA-Seq assay for CAT is not available on ENCORE database.





143 RBPs can affect the gene expression of CAT :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CATENSG00000121691.4908.936401243.25180-0.451904.266402.96170HepG2AATF
CATENSG00000121691.43669.418302010.576300.8678014.2949012.43750HepG2ABCF1
CATENSG00000121691.4681.515301566.61510-1.2008045.2436043.53330HepG2ACO1
CATENSG00000121691.41343.126902493.47220-0.8926011.2411010.23840HepG2AKAP1
CATENSG00000121691.42162.489601574.022200.458108.591107.33420HepG2AKAP8L
CATENSG00000121691.41504.704202063.19650-0.455403.964403.03110HepG2ASCC1
CATENSG00000121691.41737.282902317.00390-0.415407.591406.54490HepG2AUH
CATENSG00000121691.41093.386701443.18360-0.400502.527801.63430HepG2BCCIP
CATENSG00000121691.41637.546401254.007600.384902.692301.80430HepG2BCLAF1
CATENSG00000121691.4665.903701291.34370-0.9555015.1199013.87670HepG2BOP1
CATENSG00000121691.4651.794701488.52300-1.1914028.8131026.86440HepG2CALR
CATENSG00000121691.41444.959702201.67100-0.607605.033803.70130HepG2CCAR1
CATENSG00000121691.42913.679101960.160100.571806.740305.56650HepG2CIRBP
CATENSG00000121691.42167.766101566.330800.4687011.081209.93030HepG2CKAP4
CATENSG00000121691.41307.800601656.02570-0.340602.907801.77540HepG2CPSF7
CATENSG00000121691.41282.246201556.37020-0.279502.735701.72380HepG2YBX3
CATENSG00000121691.41327.10410891.435800.574006.073704.57970HepG2CSTF2
CATENSG00000121691.41650.910602001.46310-0.277803.261402.57510HepG2CELF1
CATENSG00000121691.41719.488402152.10580-0.323805.787004.77050HepG2DAZAP1
CATENSG00000121691.41799.937601448.920400.312904.807903.74840HepG2DDX19B
CATENSG00000121691.42746.025801372.550401.0004021.6212019.96500HepG2DDX21
CATENSG00000121691.4881.195101217.11810-0.465904.814103.08030HepG2DDX52
CATENSG00000121691.42227.848801598.903200.478504.902503.58180HepG2DDX5
CATENSG00000121691.41079.980702051.63560-0.9258011.7450010.57930HepG2DDX6
CATENSG00000121691.42910.230301498.840700.9572036.5165034.78690HepG2DKC1
CATENSG00000121691.4815.642001528.15320-0.9058021.7011019.93720HepG2DNAJC21
CATENSG00000121691.41982.406101514.783600.388007.813506.78880HepG2DNAJC2
CATENSG00000121691.42561.175001452.178400.8185012.5792010.82570HepG2EEF2
CATENSG00000121691.41147.018201972.57600-0.782209.932208.84970HepG2EIF2S1
CATENSG00000121691.4922.773801178.84900-0.353302.197201.38220HepG2EIF3D
CATENSG00000121691.41870.707801295.672900.529807.161605.55940HepG2EIF3G
CATENSG00000121691.41589.939302180.06810-0.455403.437902.72640HepG2EIF4A3
CATENSG00000121691.41531.347402123.14870-0.471408.807107.47190HepG2EIF4G1
CATENSG00000121691.42296.306602660.36000-0.212302.772102.17100HepG2ETF1
CATENSG00000121691.41323.695802030.25490-0.617105.511704.46040HepG2FIP1L1
CATENSG00000121691.4491.989101597.08130-1.6987049.3925046.47340HepG2FUBP3
CATENSG00000121691.41030.795501682.13380-0.706505.662004.10320HepG2FUS
CATENSG00000121691.41109.156602040.27930-0.8793011.6277010.31150HepG2G3BP1
CATENSG00000121691.41355.463201049.613900.368802.535401.68180HepG2GEMIN5
CATENSG00000121691.42134.581601343.890700.667407.229006.22490HepG2GPKOW
CATENSG00000121691.41746.338701247.250300.485503.886901.64160HepG2GRWD1
CATENSG00000121691.41108.902501585.50560-0.515802.982501.34320HepG2GTF2F1
CATENSG00000121691.41180.268301495.70300-0.341704.473203.25330HepG2HDGF
CATENSG00000121691.42638.421301542.794700.7740013.8922012.62050HepG2HNRNPA1
CATENSG00000121691.4382.61310583.42890-0.608703.806502.15130HepG2HNRNPAB
CATENSG00000121691.41432.860902065.44820-0.527605.788504.80640HepG2HNRNPK
CATENSG00000121691.41432.206601960.41630-0.4529010.077408.86670HepG2HNRNPL
CATENSG00000121691.42254.924001282.499200.8140012.0688010.87120HepG2HNRNPLL
CATENSG00000121691.41295.808501704.76620-0.395706.339705.45240HepG2HNRNPU
CATENSG00000121691.41935.010601563.071600.307902.856302.12060HepG2IGF2BP1
CATENSG00000121691.41052.891801946.02050-0.886203.796202.64170HepG2IGF2BP3
CATENSG00000121691.41172.122001741.35520-0.5711014.7756013.23670HepG2ILF2
CATENSG00000121691.4388.90690673.24390-0.791706.343804.44970HepG2KHDRBS1
CATENSG00000121691.41117.936202085.91990-0.899809.747007.77620HepG2KHSRP
CATENSG00000121691.4973.438401316.26190-0.435303.813402.47800HepG2LARP7
CATENSG00000121691.4689.226201233.77460-0.840006.293704.75670HepG2METAP2
CATENSG00000121691.41297.596801643.39940-0.340802.908402.08090HepG2MSI2
CATENSG00000121691.41037.322401379.91030-0.411703.654902.26340HepG2NAA15
CATENSG00000121691.41676.003202264.49040-0.434203.393502.69520HepG2NCBP2
CATENSG00000121691.41025.565202134.02150-1.0572030.2463027.96800HepG2NOL12
CATENSG00000121691.41454.580201137.177200.355002.766602.01860HepG2NSUN2
CATENSG00000121691.41110.380302016.93330-0.861109.914408.56680HepG2PABPC4
CATENSG00000121691.4912.183101687.37490-0.8874024.6427022.61770HepG2PARN
CATENSG00000121691.41255.582201520.50800-0.276202.738902.00480HepG2PPIL4
CATENSG00000121691.41751.941301094.592700.678507.646406.38340HepG2PRPF8
CATENSG00000121691.41228.102802123.04480-0.7897022.5699021.29460HepG2PTBP1
CATENSG00000121691.41654.114002162.45660-0.386608.351307.43690HepG2PUM1
CATENSG00000121691.41054.340902160.88550-1.0353027.3658025.40690HepG2PUM2
CATENSG00000121691.4867.926502299.44640-1.4056040.9345039.04380HepG2QKI
CATENSG00000121691.41428.701101894.27800-0.406904.828503.73370HepG2RBM15
CATENSG00000121691.41102.909002223.54170-1.0115031.4803030.10630HepG2RBM22
CATENSG00000121691.41459.208902086.84390-0.516107.057906.02060HepG2RBM25
CATENSG00000121691.41138.055701587.17660-0.479904.114202.88680HepG2RBM27
CATENSG00000121691.41351.619101710.08540-0.339402.974502.26910HepG2RPLP0
CATENSG00000121691.4869.635501147.07280-0.399503.543002.85630HepG2RPS19
CATENSG00000121691.4733.428701463.83550-0.9970015.4934013.71640HepG2RPS2
CATENSG00000121691.41007.09810709.492300.505203.047602.20920HepG2RPS3A
CATENSG00000121691.4443.678101518.14530-1.7747083.3231080.75220HepG2SAFB2
CATENSG00000121691.4481.85830668.11270-0.471502.616101.34020HepG2SART3
CATENSG00000121691.41025.317401269.42370-0.308102.112201.49000HepG2SF3B1
CATENSG00000121691.41202.041502210.47850-0.8789028.1340026.58750HepG2SF3B4
CATENSG00000121691.42274.674701953.232100.219702.993702.26710HepG2SLBP
CATENSG00000121691.41097.043001770.37290-0.6904020.7185019.20670HepG2SMN1
CATENSG00000121691.4974.064001567.51000-0.686405.599304.20150HepG2SMNDC1
CATENSG00000121691.4782.192601412.45550-0.852606.754505.52720HepG2SNRNP70
CATENSG00000121691.42729.438802307.214100.242402.712902.24350HepG2SRSF1
CATENSG00000121691.4869.011001365.89620-0.652405.162303.75580HepG2SRSF3
CATENSG00000121691.41397.457702011.32190-0.5253010.694209.57090HepG2SRSF5
CATENSG00000121691.41395.225201877.00120-0.427908.055807.20160HepG2SRSF9
CATENSG00000121691.44987.932902180.372301.1938058.9288057.32480HepG2SSB
CATENSG00000121691.41073.029401573.22440-0.552004.476502.87600HepG2SSRP1
CATENSG00000121691.4436.38380617.15400-0.500002.853101.73330HepG2STIP1
CATENSG00000121691.41918.583002287.44110-0.253703.827403.11730HepG2SUCLG1
CATENSG00000121691.41053.627101412.54100-0.422902.886302.19770HepG2SUPV3L1
CATENSG00000121691.41242.063202073.68400-0.7395017.3145016.08400HepG2TAF15
CATENSG00000121691.41026.559201905.57100-0.8924019.0907016.96410HepG2TIA1
CATENSG00000121691.41115.321001656.34370-0.570508.553507.76220HepG2TIAL1
CATENSG00000121691.41284.316601671.31680-0.380005.792805.03050HepG2TRIM56
CATENSG00000121691.41328.016601990.13690-0.583608.591606.90350HepG2TUFM
CATENSG00000121691.41132.515502106.51390-0.8953011.8627010.09280HepG2UBE2L3
CATENSG00000121691.4519.23120834.42860-0.684406.407505.24630HepG2UCHL5
CATENSG00000121691.41929.793201676.302900.203102.180501.54820HepG2UPF1
CATENSG00000121691.4802.309101618.40840-1.0123030.9539029.28060HepG2UTP3
CATENSG00000121691.4840.530901511.17800-0.846307.277505.28700HepG2XRCC5
CATENSG00000121691.42114.695101390.491900.604806.569805.46940HepG2XRN2
CATENSG00000121691.41070.361901535.35990-0.520503.536802.06030HepG2ZRANB2
CATENSG00000121691.45722.408204910.679600.220603.411202.79340K562AGGF1
CATENSG00000121691.46641.923105396.016800.299602.908701.89400K562AKAP8
CATENSG00000121691.46543.075805109.765600.356603.932603.15270K562AKAP8L
CATENSG00000121691.42242.986704823.56830-1.1047027.2260025.58380K562AQR
CATENSG00000121691.46544.771105361.338000.287604.095502.96480K562ATP5C1
CATENSG00000121691.41136.246302183.56980-0.942408.000806.48220K562BOP1
CATENSG00000121691.44917.037505868.59370-0.255202.687001.53180K562CCDC124
CATENSG00000121691.42362.142603387.53930-0.520102.815201.74130K562CNOT7
CATENSG00000121691.43505.573604230.63420-0.271204.022402.67690K562CPEB4
CATENSG00000121691.41624.107802321.74660-0.515607.296606.01550K562CPSF6
CATENSG00000121691.42068.615302742.55680-0.406904.863103.42630K562DDX3X
CATENSG00000121691.43881.198704377.72820-0.173702.018601.44660K562DDX47
CATENSG00000121691.44475.055605498.59380-0.297204.467003.31670K562DKC1
CATENSG00000121691.41458.011102061.90170-0.500005.594103.67470K562DNAJC21
CATENSG00000121691.44129.873202554.120300.693207.034405.00900K562EEF2
CATENSG00000121691.41509.042402467.65710-0.7095010.206108.34740K562EFTUD2
CATENSG00000121691.42379.335803586.04860-0.5918011.043509.75130K562EIF2S2
CATENSG00000121691.41915.099302641.90290-0.464203.712302.49750K562EIF3D
CATENSG00000121691.41540.630102865.30750-0.8952017.9090015.66700K562EIF4A3
CATENSG00000121691.42612.011203576.71310-0.453503.124501.38940K562ESF1
CATENSG00000121691.43164.570002501.129500.339304.543902.82130K562EWSR1
CATENSG00000121691.45053.905203363.613600.587308.957507.33820K562FIP1L1
CATENSG00000121691.42119.993202824.05400-0.413703.582902.27420K562FKBP4
CATENSG00000121691.41331.064902362.35030-0.8276013.5221011.57420K562FMR1
CATENSG00000121691.41206.390902002.31720-0.731008.941207.20830K562FTO
CATENSG00000121691.41418.395102216.68500-0.644109.487408.00610K562GPKOW
CATENSG00000121691.43679.328404779.12150-0.377303.244702.42870K562GRSF1
CATENSG00000121691.43806.877404560.10980-0.260502.031601.34540K562HSPD1
CATENSG00000121691.47394.941205422.805500.447403.271202.36670K562KIF1C
CATENSG00000121691.41362.823101892.80310-0.473903.258302.23660K562KRR1
CATENSG00000121691.42631.445103676.90870-0.482606.732105.39430K562MAGOH
CATENSG00000121691.41561.286802163.73680-0.470805.870604.56780K562METAP2
CATENSG00000121691.44768.852806472.51260-0.440705.259403.70790K562MSI2
CATENSG00000121691.42660.800203098.71820-0.219803.042802.19680K562MTPAP
CATENSG00000121691.42156.813402861.16450-0.407705.461303.74200K562NCBP2
CATENSG00000121691.45231.544202972.732700.815304.440403.10690K562PABPN1
CATENSG00000121691.41978.336503271.61330-0.7257013.0222010.78630K562PCBP2
CATENSG00000121691.41972.504402401.31980-0.283802.096501.43940K562PRPF8
CATENSG00000121691.42147.967102915.64860-0.440805.371104.05670K562PSIP1
CATENSG00000121691.42035.478803572.31640-0.8115018.6902017.04360K562PTBP1
CATENSG00000121691.44683.352806625.38380-0.500507.651106.28910K562PUF60
CATENSG00000121691.45976.458907047.14280-0.237702.766101.69860K562PUM1
CATENSG00000121691.44507.500606904.79690-0.6153017.8587015.51720K562PUM2
CATENSG00000121691.46261.348104937.521100.342605.471704.66260K562RBM15
CATENSG00000121691.42581.100603425.64940-0.408404.378803.28930K562RBM22
CATENSG00000121691.43149.182402660.496400.243202.330801.42500K562RCC2
CATENSG00000121691.42844.951402250.001600.338405.751403.48650K562RPS10
CATENSG00000121691.44073.485002455.083700.730407.296805.17300K562RRP9
CATENSG00000121691.43312.565402748.347700.269302.439201.42650K562SAFB
CATENSG00000121691.43656.851802841.542700.363803.510201.86640K562SDAD1
CATENSG00000121691.42288.365503397.32980-0.5701013.1417011.47430K562SF3A3
CATENSG00000121691.41226.016602108.18850-0.782009.382907.51590K562SF3B1
CATENSG00000121691.42478.606103084.67550-0.315603.658402.67110K562SF3B4
CATENSG00000121691.41484.136103502.01490-1.2386040.0191037.41880K562SRSF1
CATENSG00000121691.42338.274103544.36700-0.600107.906806.63390K562TARDBP
CATENSG00000121691.45298.274904630.591100.194202.594901.37000K562TROVE2
CATENSG00000121691.41597.245102460.57030-0.623407.775405.99730K562UCHL5
CATENSG00000121691.42681.817403650.61250-0.4449010.751609.45170K562UPF1
CATENSG00000121691.43936.010003248.319000.276905.231504.10180K562WDR43
CATENSG00000121691.44522.546705715.41840-0.337703.866702.33160K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CAT is not available on ENCORE database.





1 RBPs can affect the splicing of CAT :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECATENSG00000121691.4chr11+3447932234479394344782113447836434482797344829360.061000.000000.00086includedHepG2FUBP3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CAT is not avaliable on ENCORE database.