CSE1L

General Information

Gene Name       : CSE1L
Gene ID             : ENSG00000124207.16
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: CSE1L)


Antibody Validation

 View validation images for all CSE1L antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CSE1LENSG00000124207.1695.8489.1892.51ENCSR000AEF
HepG2CSE1LENSG00000124207.16112.00219.29165.64ENCSR985KAT
K562CSE1LENSG00000124207.16146.43171.30158.87ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq CSE1L-BGKcLV28-K562ENCSR877CJJCSE1LK562ReleasedENCSR220DTX   CRISPRKD% = 73.9,78.9






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
CSE1LENCAB024AVFA300-473A2Released, ENCODE4BGHcLV34-15, Released, ENCODE4BGKcLV28-43, Released, ENCODE4
CSE1LENCAB578YRGA300-472A2Released, ENCODE4BGHcLV34-15, Released, ENCODE4BGKcLV28-43, Submitted, ENCORE2


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
CSE1LK562CRISPRENCSR877CJJENCSR220DTXCSE1L-BGKcLV28-43,CSE1L-BGKcLV28-44NT-BGKcLV28-1,NT-BGKcLV28-273.9,78.9ReleasedENCODE4
CSE1LHepG2CRISPRBGHcLV29-43,BGHcLV29-44BGHcLV29-1,BGHcLV29-232.7,34.2NotSatisfiedENCODE4
CSE1LHepG2CRISPRCSE1L-BGHcLV34-15,CSE1L-BGHcLV34-16NT-BGHcLV34-1,NT-BGHcLV34-252.0,60.8SubmittingENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
CSE1LProduct_ID: A300-472A
Lot_ID: 2
Source: Bethyl Labs
Target Name: CSE1L-human		 Bethyl_A300-472A_2_CSE1L.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the CSE1L specific antibody, A300-472A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the CSE1L-specific antibody, A300-472A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 CSE1L-K562-CRISPR-A300-472A.png<br>Caption: Western blot following CRISPR against CSE1L in K562 whole cell lysate using CSE1L specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against CSE1L. CSE1L protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
CSE1LProduct_ID: A300-473A
Lot_ID: 2
Source: Bethyl Labs
Target Name: CSE1L-human		 CSE1L-HEPG2-CRISPR-A300-473A.png<br>Caption: Western blot following CRISPR against CSE1L in HepG2 whole cell lysate using CSE1L specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against CSE1L. CSE1L protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
 Bethyl_A300-473A_2_CSE1L.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the CSE1L specific antibody, A300-473A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the CSE1L-specific antibody, A300-473A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 CSE1L-K562-CRISPR-A300-473A.png<br>Caption: Western blot following CRISPR against CSE1L in K562 whole cell lysate using CSE1L specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against CSE1L. CSE1L protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for CSE1L is not avaliable on ENCORE database.



Proteins bound to RNA
  • CSE1L RNA is bound by 34 proteins.  







eCLIP assay for CSE1L is not avaliable on ENCORE database.





34 proteins are bound to CSE1L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr204771306947713128+3'-UTR5.030255.61461HepG2SUB1
chr204771296147712974+3'-UTR,CDS4.3575811.40770K562YBX3
chr204771312847713214+3'-UTR4.362746.24168HepG2CSTF2
chr204771312847713233+3'-UTR5.9947111.21418HepG2SUB1
chr204766295447662961+5'-UTR,intron-Proximal4.1284430.53347K562DDX3X
chr204767498947675019+5'-UTR,CDS,intron-Proximal3.046465.06281HepG2NCBP2
chr204767504347675085+5'-UTR,CDS3.923426.32861K562GEMIN5
chr204766286447662958+5'-UTR5.1810123.23109K562GEMIN5
chr204766292947662961+5'-UTR,intron-Proximal3.5378813.28421HepG2NCBP2
chr204766286547662913+5'-UTR3.6174912.85699K562DDX3X
chr204766286147662960+5'-UTR3.177468.19104HepG2DDX3X
chr204766285647662929+5'-UTR3.8523721.15155HepG2NCBP2
chr204767973947679845+5'-UTR,CDS,intron-Proximal3.861377.50965HepG2GRWD1
chr204767505447675085+5'-UTR,CDS5.022076.03821HepG2GRWD1
chr204767505747675109+5'-UTR,CDS,intron-Proximal5.414609.97647HepG2PRPF8
chr204766291347662954+5'-UTR4.1569438.66456K562DDX3X
chr204767498947675041+5'-UTR,CDS,intron-Proximal4.4950436.71963K562DDX3X
chr204769185847691896+CDS3.580315.96568HepG2GRWD1
chr204769185647691899+CDS3.247385.46795K562FMR1
chr204769203347692056+CDS4.2484219.31038K562YBX3
chr204768920847689284+CDS,intron-Proximal4.851838.13161K562EFTUD2
chr204768381347683851+CDS,intron-Distal,intron-Proximal4.214965.85201K562PRPF8
chr204768284147682904+CDS,intron-Distal,intron-Proximal4.088337.75469HepG2EFTUD2
chr204769202547692050+CDS3.402015.73981HepG2GRWD1
chr204768283647682969+CDS,intron-Distal,intron-Proximal3.5843715.80410K562EFTUD2
chr204770455747704644+CDS,intron-Proximal3.145167.02615K562HNRNPL
chr204771124647711278+CDS,intron-Proximal5.044519.90864HepG2SF3A3
chr204771071947710788+CDS3.745425.49938HepG2G3BP1
chr204771078747710808+CDS3.103927.76399K562YBX3
chr204769185547691893+CDS3.023907.15529HepG2PPIG
chr204768518147685291+CDS,intron-Distal,intron-Proximal6.2596019.43838HepG2AQR
chr204769127947691330+CDS,intron-Proximal3.477197.92195HepG2SF3A3
chr204768895247688970+CDS,intron-Distal3.8973911.47083K562YBX3
chr204768378147683800+CDS,intron-Distal3.038724.24993HepG2PPIG
chr204770068347700699+CDS3.7748310.55267K562YBX3
chr204771120247711281+CDS,intron-Proximal4.315727.80703K562SF3B4
chr204771149847711529+CDS,intron-Proximal3.252464.22621HepG2PRPF8
chr204768298947683047+CDS,intron-Distal3.815985.27471HepG2LIN28B
chr204770578347705870+CDS,intron-Proximal4.1556311.90318K562IGF2BP1
chr204771125247711312+CDS,intron-Proximal3.5340826.50118HepG2U2AF2
chr204768297747683047+CDS,intron-Distal5.5657526.33504K562LIN28B
chr204771286847712931+CDS,intron-Proximal3.343868.65904HepG2U2AF2
chr204768682047686836+CDS,intron-Proximal3.5931111.73537HepG2BCLAF1
chr204768894247688985+CDS,intron-Distal3.3638610.73945HepG2BCLAF1
chr204768266847682797+CDS,intron-Distal,intron-Proximal3.425216.76873HepG2AQR
chr204768273647682815+CDS,intron-Distal3.568228.79196HepG2G3BP1
chr204768296947682982+CDS,intron-Distal3.146913.47684HepG2GRWD1
chr204770584047705921+CDS4.7715984.73485K562PUM2
chr204768274647682795+CDS,intron-Distal3.7252422.52827HepG2BCLAF1
chr204769131947691385+CDS,intron-Proximal3.172455.49645K562GRWD1
chr204770181947701867+CDS,intron-Proximal4.984966.05696K562IGF2BP1
chr204769198547691991+CDS4.4409324.84269K562YBX3
chr204771133847711423+CDS3.745429.33213HepG2G3BP1
chr204771124847711305+CDS,intron-Proximal3.243524.84256K562U2AF2
chr204768892747688952+CDS,intron-Distal3.324457.54844K562YBX3
chr204769202247692027+CDS4.4534630.37915K562YBX3
chr204771126847711294+CDS,intron-Proximal3.705997.42315K562YBX3
chr204768916047689176+CDS3.148179.17533K562YBX3
chr204768273247682746+CDS,intron-Distal3.691837.93794HepG2BCLAF1
chr204769134147691386+CDS4.1864511.88486HepG2PPIG
chr204768917647689191+CDS3.193477.83672K562YBX3
chr204769185347691906+CDS,intron-Proximal3.151014.84423K562U2AF2
chr204770186747701907+CDS4.429458.32481K562IGF2BP1
chr204770750447707551+CDS3.082213.85701K562IGF2BP1
chr204768882747688915+CDS,intron-Distal3.264224.38893K562ZNF800
chr204768380547683817+CDS,intron-Distal3.050826.46802K562YBX3
chr204768274947682818+CDS,intron-Distal3.091368.17760HepG2GRWD1
chr204768912747689145+CDS4.0689812.82496HepG2BCLAF1
chr204768921447689266+CDS,intron-Proximal3.497844.43583K562GPKOW
chr204771124647711287+CDS,intron-Proximal4.721686.16419K562SMNDC1
chr204768922747689282+CDS,intron-Proximal4.3783913.18177K562PRPF8
chr204768285647682922+CDS,intron-Distal,intron-Proximal6.1508112.01365K562SF3B4
chr204771071847710781+CDS4.6703223.15230HepG2BCLAF1
chr204770857547708609+CDS,intron-Proximal4.674113.77802HepG2U2AF2
chr204768294047682989+CDS,intron-Distal4.0379816.89106HepG2BCLAF1
chr204768522147685296+CDS,intron-Distal,intron-Proximal3.8953822.20449K562AQR
chr204768292947682987+CDS,intron-Distal3.304848.05447HepG2PPIG
chr204769355347693583+CDS3.878086.80293K562YBX3
chr204768913247689158+CDS3.627528.28018K562YBX3
chr204769196347691985+CDS3.470298.65339K562YBX3
chr204768919347689233+CDS3.101487.77882HepG2PPIG
chr204769191147691985+CDS3.7773523.07331HepG2BCLAF1
chr204769199147692022+CDS4.3353233.98586K562YBX3
chr204768272747682785+CDS,intron-Distal,intron-Proximal3.018234.42779K562GRWD1
chr204768293247682982+CDS,intron-Distal4.028173.89395K562GRWD1
chr204771134747711442+CDS3.142419.93554HepG2GRWD1
chr204768376947683805+CDS,intron-Distal3.360976.64273K562YBX3
chr204768916647689193+CDS3.723453.93645HepG2PPIG
chr204768921947689271+CDS,intron-Proximal5.7493313.78100HepG2PRPF8
chr204768317047683278+intron-Distal3.8476710.58053K562KHSRP
chr204768693347686961+intron-Distal,intron-Proximal4.617816.27552K562KHSRP
chr204768310047683137+intron-Distal,intron-Proximal4.238343.89565K562PRPF8
chr204770765347707721+intron-Distal,intron-Proximal3.799966.99200HepG2EFTUD2
chr204768418647684237+intron-Distal4.545315.19823K562KHSRP
chr204769522747695260+intron-Distal,intron-Proximal3.893064.19412K562EFTUD2
chr204771116047711230+intron-Distal,intron-Proximal4.710577.58902K562KHSRP
chr204768428247684327+intron-Distal3.874886.21987K562AQR
chr204766449047664548+intron-Distal4.261487.08005HepG2QKI
chr204766469947664823+intron-Distal3.872343.09122HepG2PTBP1
chr204771254747712621+intron-Distal,intron-Proximal4.551788.64802HepG2U2AF2
chr204771202847712080+intron-Distal3.175965.60800HepG2HNRNPC
chr204768309147683168+intron-Distal,intron-Proximal4.6529811.81487K562KHSRP
chr204771085847710937+intron-Distal,intron-Proximal3.193683.53952HepG2KHSRP
chr204771099647711064+intron-Distal4.217848.36543HepG2U2AF2
chr204768696247687025+intron-Distal4.958527.48817HepG2KHSRP
chr204769096247691048+intron-Distal3.233536.59733K562KHSRP
chr204766439547664480+intron-Distal5.8562310.44346HepG2QKI
chr204770281547702866+intron-Distal4.231864.38266K562TARDBP
chr204768386447683940+intron-Distal,intron-Proximal4.475389.12083K562PRPF8
chr204768819447688251+intron-Distal4.016638.44922HepG2ILF3
chr204767934747679471+intron-Distal3.267583.22526HepG2QKI
chr204766347847663555+intron-Distal3.843236.08171HepG2QKI
chr204771085147710954+intron-Distal,intron-Proximal5.258309.11053K562PRPF8
chr204771088447710947+intron-Distal,intron-Proximal4.625223.93804HepG2U2AF1
chr204768381747683906+intron-Distal,intron-Proximal6.5446318.07825K562AQR
chr204768935547689426+intron-Distal5.4490710.64116K562PRPF8
chr204768429847684326+intron-Distal3.458025.03897K562PRPF8
chr204769148047691569+intron-Distal,intron-Proximal3.173743.11628K562KHSRP
chr204771265047712697+intron-Distal,intron-Proximal3.956574.23286HepG2QKI
chr204767339747673468+intron-Distal3.886173.46495K562TARDBP
chr204769165847691725+intron-Distal4.252835.19823K562KHSRP
chr204768428447684298+intron-Distal3.635684.93376K562PRPF8
chr204769045947690539+intron-Distal3.765627.97040HepG2ILF3
chr204771116747711233+intron-Distal,intron-Proximal3.234174.00685K562TIA1
chr204768696147687054+intron-Distal4.7181519.24552K562KHSRP
chr204768385647683931+intron-Distal,intron-Proximal3.531268.22729K562KHSRP
chr204769206447692110+intron-Proximal4.038677.16374K562AQR
chr204766296047662969+intron-Proximal4.063558.17589HepG2PRPF8
chr204771084647710914+intron-Proximal3.622135.78005K562KHSRP
chr204771121147711246+intron-Proximal5.093656.49692HepG2SF3A3
chr204770072147700768+intron-Proximal4.667713.69482HepG2RBM22
chr204771058547710637+intron-Proximal3.252834.52210K562KHSRP
chr204766296947662994+intron-Proximal4.176038.78209HepG2PRPF8
chr204771086047710890+intron-Proximal3.924715.76944HepG2U2AF2
chr204771084647710914+intron-Proximal4.058583.31824HepG2TIAL1
chr204768686847686933+intron-Proximal5.2138311.16851K562KHSRP
chr204771084947710896+intron-Proximal4.212074.73315K562TIA1
chr204766296247663005+intron-Proximal4.699634.65563K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CSE1L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CSE1L is not available on ENCORE database.

  • 143 RBPs can affect the levels of CSE1L.  








The Knockdown/knockout RNA-Seq assay for CSE1L is not available on ENCORE database.





143 RBPs can affect the gene expression of CSE1L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CSE1LENSG00000124207.125837.202904850.519600.267005.358804.56750HepG2ACO1
CSE1LENSG00000124207.126521.271804270.764700.610606.560905.78060HepG2AKAP1
CSE1LENSG00000124207.122115.318203533.77570-0.7403010.331608.88420HepG2ASCC1
CSE1LENSG00000124207.124696.481607663.03690-0.7063028.3725026.59130HepG2AUH
CSE1LENSG00000124207.124324.202605958.94340-0.462603.328102.29990HepG2BCCIP
CSE1LENSG00000124207.122150.083805178.35450-1.2681017.2051015.27840HepG2BCLAF1
CSE1LENSG00000124207.123711.859409559.12210-1.3647045.3795043.52170HepG2BOP1
CSE1LENSG00000124207.124299.928707038.84350-0.7110018.6832017.01240HepG2CALR
CSE1LENSG00000124207.126690.632009334.16180-0.480402.288101.41030HepG2CCAR1
CSE1LENSG00000124207.122382.622603357.30550-0.494804.498703.52540HepG2CIRBP
CSE1LENSG00000124207.122479.642104849.76120-0.9678060.5779058.44990HepG2CKAP4
CSE1LENSG00000124207.121413.427602421.65010-0.776805.987704.86060HepG2CNOT7
CSE1LENSG00000124207.122580.182208775.93050-1.7661057.0517054.57850HepG2CPSF6
CSE1LENSG00000124207.124478.760905232.50850-0.224402.727101.71790HepG2YBX3
CSE1LENSG00000124207.124700.153506959.11660-0.5662016.4814015.17450HepG2CELF1
CSE1LENSG00000124207.125312.594107483.30540-0.4943014.9679013.48660HepG2DAZAP1
CSE1LENSG00000124207.123266.915704081.05140-0.321001.935301.35510HepG2DDX21
CSE1LENSG00000124207.122802.453304091.23370-0.545805.763604.89180HepG2DDX3X
CSE1LENSG00000124207.123265.468205858.61950-0.8433010.692409.28920HepG2DDX55
CSE1LENSG00000124207.125384.927509965.66890-0.888007.123405.59370HepG2DDX59
CSE1LENSG00000124207.124527.379506157.90780-0.443803.650302.49510HepG2DDX5
CSE1LENSG00000124207.121384.853203514.06780-1.3434025.5349023.93860HepG2DDX6
CSE1LENSG00000124207.123090.306304955.74520-0.681405.331404.00000HepG2DHX30
CSE1LENSG00000124207.123244.819204640.70930-0.5162014.1621012.87640HepG2DKC1
CSE1LENSG00000124207.123348.372005138.27430-0.6178015.3181013.78330HepG2DNAJC21
CSE1LENSG00000124207.122527.162205092.40330-1.0108036.4605034.34610HepG2DNAJC2
CSE1LENSG00000124207.122681.405903756.00290-0.486203.807602.49750HepG2AGO1
CSE1LENSG00000124207.121332.176003378.54230-1.3426029.6840027.87850HepG2EIF2S1
CSE1LENSG00000124207.122384.626003733.87200-0.646906.821605.81610HepG2EIF4A3
CSE1LENSG00000124207.126489.863007382.26930-0.185902.642201.82070HepG2EIF4G1
CSE1LENSG00000124207.122618.194807071.82600-1.4335038.6133036.05070HepG2EIF4G2
CSE1LENSG00000124207.125820.588008798.00820-0.5960020.6540019.26920HepG2ETF1
CSE1LENSG00000124207.123546.684708790.69070-1.309509.358807.52490HepG2FTO
CSE1LENSG00000124207.125473.081803766.758800.538906.193105.18500HepG2FXR1
CSE1LENSG00000124207.125536.782609948.57240-0.8454013.3752012.06850HepG2GPKOW
CSE1LENSG00000124207.123654.589004631.03700-0.341606.643905.21390HepG2HDGF
CSE1LENSG00000124207.121405.845902047.24200-0.542203.789002.16720HepG2HNRNPA0
CSE1LENSG00000124207.123045.113105187.49480-0.7685016.3272014.96780HepG2HNRNPA1
CSE1LENSG00000124207.124838.415306877.10840-0.5073014.9600013.14510HepG2HNRNPA2B1
CSE1LENSG00000124207.123766.358305769.96350-0.6154010.536409.25870HepG2HNRNPC
CSE1LENSG00000124207.123712.034707136.43290-0.9430047.5452045.25660HepG2HNRNPF
CSE1LENSG00000124207.124425.184406816.88430-0.6234032.6808030.67970HepG2HNRNPL
CSE1LENSG00000124207.124378.916909494.07230-1.1165026.8138025.18940HepG2HNRNPLL
CSE1LENSG00000124207.123018.519605731.82820-0.9252028.5092026.73260HepG2HNRNPU
CSE1LENSG00000124207.123703.514907027.34230-0.9241028.7311026.69930HepG2IGF2BP1
CSE1LENSG00000124207.122409.412203552.20480-0.560006.299905.31840HepG2IGF2BP2
CSE1LENSG00000124207.123729.748305854.90100-0.6506018.0430016.35630HepG2ILF2
CSE1LENSG00000124207.121730.531202360.74970-0.448002.661101.37260HepG2ILF3
CSE1LENSG00000124207.123224.276804434.16710-0.4597015.1650013.04320HepG2KIF1C
CSE1LENSG00000124207.121825.678002524.43610-0.467503.050201.73530HepG2KRR1
CSE1LENSG00000124207.126780.629509850.17430-0.538702.863502.01940HepG2LARP4
CSE1LENSG00000124207.126933.766203789.252100.8716013.0965011.79870HepG2MATR3
CSE1LENSG00000124207.123626.005905190.54500-0.517503.017002.17260HepG2MSI2
CSE1LENSG00000124207.125196.916709681.90770-0.897609.548907.71730HepG2MTPAP
CSE1LENSG00000124207.123075.491404357.98430-0.502803.067801.78830HepG2NAA15
CSE1LENSG00000124207.124086.504707420.40100-0.8606029.1467026.87840HepG2NOL12
CSE1LENSG00000124207.124262.458408418.04110-0.9818023.9074022.03000HepG2NSUN2
CSE1LENSG00000124207.121497.705602213.22850-0.563403.089402.14920HepG2PABPC1
CSE1LENSG00000124207.122133.991103454.47360-0.694908.776507.50890HepG2PABPC4
CSE1LENSG00000124207.124334.902705673.73550-0.388306.220305.02830HepG2PARN
CSE1LENSG00000124207.122266.667405034.53690-1.1513014.3110012.22100HepG2PCBP2
CSE1LENSG00000124207.123136.505105112.36160-0.7048014.0840012.49320HepG2PPIL4
CSE1LENSG00000124207.122241.944204520.86240-1.0118013.4331011.84850HepG2PRPF8
CSE1LENSG00000124207.124336.430303470.577600.321205.542104.82350HepG2PTBP1
CSE1LENSG00000124207.121447.922107083.27040-2.29040129.22750125.97270HepG2PUF60
CSE1LENSG00000124207.126590.867907519.02630-0.190104.140603.44660HepG2PUM1
CSE1LENSG00000124207.125089.619107513.64470-0.5620012.5049011.13970HepG2PUM2
CSE1LENSG00000124207.123862.120504940.61210-0.355308.520307.54000HepG2PUS1
CSE1LENSG00000124207.123216.773503758.85740-0.224702.449301.85540HepG2QKI
CSE1LENSG00000124207.124671.447506925.62080-0.568108.999407.57160HepG2RBM15
CSE1LENSG00000124207.125435.437403862.472700.4928013.2544012.23040HepG2NELFE
CSE1LENSG00000124207.124318.227003597.272100.263404.159003.42390HepG2RECQL
CSE1LENSG00000124207.122891.379507687.78890-1.4108049.4805047.46820HepG2RPLP0
CSE1LENSG00000124207.122674.958604772.40120-0.835207.755506.24450HepG2RPS10
CSE1LENSG00000124207.122584.455503299.48130-0.352401.991101.46160HepG2RPS19
CSE1LENSG00000124207.123919.765804925.83000-0.329602.910402.09170HepG2RPS2
CSE1LENSG00000124207.121891.383302431.21280-0.362202.053101.36400HepG2RPS3A
CSE1LENSG00000124207.122318.804604472.20730-0.9476011.096509.68750HepG2RRP9
CSE1LENSG00000124207.123118.869305104.54390-0.7108019.5728018.07750HepG2SAFB2
CSE1LENSG00000124207.123307.933009397.47050-1.5063044.2533041.87370HepG2SF3B1
CSE1LENSG00000124207.122986.523603613.43380-0.274904.468403.74420HepG2SF3B4
CSE1LENSG00000124207.124432.181506791.38670-0.6157030.2304028.40030HepG2SLBP
CSE1LENSG00000124207.125250.9789010456.25690-0.9937011.100109.54990HepG2SNRNP70
CSE1LENSG00000124207.124694.786808305.62620-0.8230046.2848044.88970HepG2SRFBP1
CSE1LENSG00000124207.1212193.032003771.595801.69270185.00030182.74410HepG2SRSF1
CSE1LENSG00000124207.126036.7697010111.10100-0.744108.915007.03100HepG2SRSF3
CSE1LENSG00000124207.126302.483506993.48440-0.150101.989301.44750HepG2SRSF5
CSE1LENSG00000124207.122798.414107011.33310-1.3251090.7730088.21110HepG2SRSF7
CSE1LENSG00000124207.122375.887603068.35380-0.369007.632906.79940HepG2SRSF9
CSE1LENSG00000124207.125802.670207211.36820-0.313604.009203.41650HepG2SSB
CSE1LENSG00000124207.127132.038207953.70110-0.157302.819002.19280HepG2SUCLG1
CSE1LENSG00000124207.121877.778602548.60440-0.440702.857501.50500HepG2SUGP2
CSE1LENSG00000124207.122418.542804330.65260-0.840405.475104.17740HepG2SUPT6H
CSE1LENSG00000124207.122365.608205832.57450-1.3019019.9444018.42090HepG2SUPV3L1
CSE1LENSG00000124207.124373.763803389.927600.367505.989105.21690HepG2TAF15
CSE1LENSG00000124207.124170.923209252.79600-1.1495031.8379029.89210HepG2TARDBP
CSE1LENSG00000124207.122481.572203909.61960-0.655807.241705.75930HepG2TFIP11
CSE1LENSG00000124207.121970.672105570.16250-1.4990054.4614052.77290HepG2TIAL1
CSE1LENSG00000124207.122871.016505619.28970-0.9688032.8593031.18310HepG2TRIM56
CSE1LENSG00000124207.125608.919106919.76450-0.303003.643002.62580HepG2TUFM
CSE1LENSG00000124207.122136.968805485.11040-1.3600012.5942011.22110HepG2U2AF1
CSE1LENSG00000124207.121954.921906947.18490-1.829304.653703.35200HepG2U2AF2
CSE1LENSG00000124207.125625.398007324.27080-0.380703.448502.51220HepG2UBE2L3
CSE1LENSG00000124207.122141.509903445.76090-0.686208.323607.00880HepG2UCHL5
CSE1LENSG00000124207.122980.682305073.72020-0.7674033.7849031.90610HepG2UPF1
CSE1LENSG00000124207.123299.461605341.93060-0.695105.577404.11560HepG2UPF2
CSE1LENSG00000124207.124529.751905215.12600-0.203302.605601.58270HepG2UTP18
CSE1LENSG00000124207.121592.216302177.61600-0.451702.809801.70260HepG2XPO5
CSE1LENSG00000124207.123533.140905741.51770-0.700507.926606.70960HepG2XRN2
CSE1LENSG00000124207.125720.866904933.918700.213404.000603.21690HepG2ZC3H8
CSE1LENSG00000124207.121633.453705580.13060-1.77240201.33600198.79540HepG2ZNF622
CSE1LENSG00000124207.127888.088205761.613700.453104.237602.74240K562AARS
CSE1LENSG00000124207.129850.4344014658.62590-0.573506.280104.44920K562ABCF1
CSE1LENSG00000124207.125842.177506670.21980-0.191202.891102.31210K562AGGF1
CSE1LENSG00000124207.126517.3093011404.28600-0.8072017.7805016.46060K562AQR
CSE1LENSG00000124207.125718.957606671.31250-0.222203.850702.70600K562BCLAF1
CSE1LENSG00000124207.125140.800808425.73940-0.712807.520306.05500K562BOP1
CSE1LENSG00000124207.122743.178003358.06530-0.291802.331901.38080K562CCAR1
CSE1LENSG00000124207.126055.7766011611.82580-0.939208.391206.50130K562CNOT7
CSE1LENSG00000124207.123942.365108959.21010-1.1843026.5997024.13920K562CPSF6
CSE1LENSG00000124207.124239.708305061.18530-0.255503.437402.23820K562CSTF2
CSE1LENSG00000124207.126297.898207353.08340-0.223503.145401.84850K562DDX21
CSE1LENSG00000124207.124094.808505449.05860-0.412205.658204.10190K562DDX3X
CSE1LENSG00000124207.124418.822605524.58490-0.322204.925903.00450K562DDX6
CSE1LENSG00000124207.1210131.086507469.156700.439709.671807.83140K562DKC1
CSE1LENSG00000124207.124069.022505702.54650-0.486903.183902.20010K562EFTUD2
CSE1LENSG00000124207.124499.767905985.14970-0.411509.387607.10450K562EIF2S1
CSE1LENSG00000124207.125809.068809138.02570-0.6536012.2108010.85570K562EIF2S2
CSE1LENSG00000124207.122626.269005692.85750-1.1161030.4168027.38060K562EIF4A3
CSE1LENSG00000124207.1211421.6259014248.95280-0.319103.652802.57510K562EIF4G2
CSE1LENSG00000124207.128625.7314010536.18390-0.288602.339601.56020K562FIP1L1
CSE1LENSG00000124207.126699.755109115.33540-0.444205.442104.23520K562FMR1
CSE1LENSG00000124207.124855.592207725.87430-0.670109.200007.43590K562FTO
CSE1LENSG00000124207.127999.605305920.321300.4342010.030908.96330K562FXR1
CSE1LENSG00000124207.128611.928506214.941900.470503.630402.79510K562G3BP2
CSE1LENSG00000124207.125354.258708554.02600-0.6759010.705609.12660K562GPKOW
CSE1LENSG00000124207.128404.1480012178.24900-0.535104.851403.85230K562GRSF1
CSE1LENSG00000124207.124603.703506305.73530-0.453905.870105.03220K562HNRNPC
CSE1LENSG00000124207.128453.1766011020.03270-0.382603.938802.65010K562HNRNPL
CSE1LENSG00000124207.124745.045908061.90890-0.7647024.5984022.13810K562HNRNPU
CSE1LENSG00000124207.1211256.7648014285.54680-0.343802.925302.10840K562HSPD1
CSE1LENSG00000124207.124332.046107106.38510-0.7141013.2716010.53390K562IGF2BP3
CSE1LENSG00000124207.124588.459007303.58580-0.670606.795105.26270K562KRR1
CSE1LENSG00000124207.125830.391707343.52530-0.332903.298002.37360K562MAGOH
CSE1LENSG00000124207.126008.601808349.60570-0.474706.690805.29620K562METAP2
CSE1LENSG00000124207.127075.813108346.73250-0.238304.561403.54450K562MTPAP
CSE1LENSG00000124207.127056.181309274.27260-0.3943016.1914014.59300K562NSUN2
CSE1LENSG00000124207.124675.075506207.66980-0.409104.074402.18410K562NUSAP1
CSE1LENSG00000124207.124694.541106534.17440-0.477006.806805.25140K562PCBP2
CSE1LENSG00000124207.126650.155308307.75840-0.321102.583901.78210K562PCBP3
CSE1LENSG00000124207.125357.366706372.19230-0.250302.693001.90450K562POLR2G
CSE1LENSG00000124207.128796.8741011959.91430-0.443104.252203.20520K562PPIG
CSE1LENSG00000124207.124253.964005653.58410-0.410404.967603.70740K562PSIP1
CSE1LENSG00000124207.128887.657307134.590200.316903.852803.08080K562PTBP1
CSE1LENSG00000124207.128707.1430015547.07120-0.8364015.2119013.27560K562PUF60
CSE1LENSG00000124207.1211706.5991016202.85300-0.468907.094505.53000K562PUM2
CSE1LENSG00000124207.128408.553606883.833200.288502.318201.81200K562PUS1
CSE1LENSG00000124207.125740.630406841.98410-0.253202.099801.37190K562RBM22
CSE1LENSG00000124207.127072.416505678.222000.316703.544502.31410K562SAFB
CSE1LENSG00000124207.126779.412109150.88920-0.4328010.103508.61820K562SF3A3
CSE1LENSG00000124207.125090.490408134.50770-0.676308.816607.00800K562SF3B1
CSE1LENSG00000124207.123340.311906466.65090-0.9530012.6259010.71200K562SF3B4
CSE1LENSG00000124207.127972.419709375.24290-0.233805.391604.13710K562SRPK2
CSE1LENSG00000124207.123875.933604640.08220-0.259602.525401.52720K562SRSF4
CSE1LENSG00000124207.125028.364206605.03090-0.393504.321402.96360K562SRSF5
CSE1LENSG00000124207.123340.542205374.43460-0.686004.244502.96310K562SUPV3L1
CSE1LENSG00000124207.129368.726006391.670800.551605.790104.59520K562SYNCRIP
CSE1LENSG00000124207.124392.262207078.84410-0.6885010.890209.33020K562TARDBP
CSE1LENSG00000124207.125484.058006828.25560-0.316303.858002.86920K562TIA1
CSE1LENSG00000124207.124243.128305437.90060-0.357902.846701.89700K562TIAL1
CSE1LENSG00000124207.125496.306406699.74870-0.285602.642501.57860K562TRA2A
CSE1LENSG00000124207.124461.138105776.16160-0.372704.063302.87170K562TRIM56
CSE1LENSG00000124207.129410.6150012328.00120-0.389603.373001.81490K562TRIP6
CSE1LENSG00000124207.124824.777606225.12540-0.367603.031202.19010K562U2AF2
CSE1LENSG00000124207.124095.412505687.37310-0.473802.923601.87210K562UCHL5
CSE1LENSG00000124207.125789.540709833.68390-0.7643031.6297029.51200K562UPF1
CSE1LENSG00000124207.127166.0750010145.72170-0.501605.371903.70110K562UTP3
CSE1LENSG00000124207.125383.809908414.41190-0.6442013.4157011.44040K562WDR3
CSE1LENSG00000124207.129110.4304013510.42840-0.5685010.674608.32530K562WRN
CSE1LENSG00000124207.129798.1775012848.06910-0.391004.907203.70630K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CSE1L is not available on ENCORE database.





19 RBPs can affect the splicing of CSE1L :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECSE1LENSG00000124207.12chr20+4771271247712737477112684771150047712885477131230.132000.000000.00000includedK562SF3B4
SECSE1LENSG00000124207.12chr20+4771101447711151477106764771082347711268477115000.168000.000000.00000includedK562SF3B4
SECSE1LENSG00000124207.12chr20+476888644768899047686741476868344768910447689234-0.059000.001580.03051excludedK562SF3B4
SECSE1LENSG00000124207.12chr20+477045454770464347700562477006994770578347705934-0.078000.000000.00000excludedK562SF3B4
SECSE1LENSG00000124207.12chr20+4771271247712764477112684771150047712885477131230.091000.000000.00000includedK562PRPF8
SECSE1LENSG00000124207.12chr20+477045454770464347700562477006994770578347705934-0.053000.000020.00177excludedK562PRPF8
SECSE1LENSG00000124207.12chr20+477018194770192347700562477006994770454547704643-0.092000.000000.00000excludedHepG2U2AF1
SECSE1LENSG00000124207.12chr20+477045454770464347700562477006994770578347705934-0.090000.000010.00269excludedHepG2PRPF8
SECSE1LENSG00000124207.12chr20+477018194770192347700562477006994770454547704643-0.094000.000000.00000excludedHepG2U2AF2
SECSE1LENSG00000124207.12chr20+476888644768899047686741476868344768910447689234-0.115000.000100.00196excludedHepG2U2AF2
SECSE1LENSG00000124207.12chr20+4768886447688990476867414768683447689104476892340.062000.000040.00478includedHepG2AKAP1
SECSE1LENSG00000124207.12chr20+4771271247712764477112684771150047712885477131230.069000.000010.00013includedK562AQR
SECSE1LENSG00000124207.12chr20+477018194770192347700536477006994770454547704643-0.054000.000000.00000excludedK562AQR
SECSE1LENSG00000124207.12chr20+477085384770866447707473477075594771067647710823-0.078000.000000.00000excludedK562AQR
SECSE1LENSG00000124207.12chr20+476912634769138747689104476892344769185447692057-0.055000.000000.00007excludedK562AQR
SECSE1LENSG00000124207.12chr20+477127124771276447711268477115004771288547713123-0.061000.000020.01617excludedK562ABCF1
SECSE1LENSG00000124207.12chr20+477018194770197747700562477006994770454547704643-0.096000.000000.00040excludedHepG2SRSF7
SECSE1LENSG00000124207.12chr20+4771271247712764477112684771150047712885477131230.069000.000000.00051includedK562EFTUD2
SECSE1LENSG00000124207.12chr20+477045454770464347700562477006994770578347705934-0.121000.000000.00000excludedK562U2AF1
SECSE1LENSG00000124207.12chr20+477045454770464347700562477006994770578347705934-0.136000.000000.00006excludedHepG2PCBP2
SECSE1LENSG00000124207.12chr20+477018194770192347700562477006994770578347705934-0.094000.000000.00026excludedHepG2CDC40
SECSE1LENSG00000124207.12chr20+4771271247712764477112684771150047712885477131230.105000.000000.00001includedHepG2SF3A3
SECSE1LENSG00000124207.12chr20+4771101447711151477106764771082347711268477115000.058000.000000.00000includedHepG2SF3A3
SECSE1LENSG00000124207.12chr20+477018194770192347700562477006994770454547704643-0.074000.000000.00000excludedHepG2SF3A3
SECSE1LENSG00000124207.12chr20+477018194770192347700562477006994770578347705934-0.058000.000560.04308excludedHepG2TIAL1
SECSE1LENSG00000124207.12chr20+477045454770464347700562477006994770578347705934-0.089000.000030.00271excludedHepG2SF3B4
SECSE1LENSG00000124207.12chr20+477045454770464347700562477006994770578347705934-0.161000.000000.00000excludedK562U2AF2
SECSE1LENSG00000124207.12chr20+477045454770464347700562477006994770578347705934-0.066000.000000.00002excludedK562HNRNPU
SECSE1LENSG00000124207.12chr20+4771271247712737477112684771150047712885477131230.112000.002560.08201includedK562SF3B1
SECSE1LENSG00000124207.12chr20+4771101447711151477106764771082347711268477115000.056000.000000.00004includedK562SF3B1
SECSE1LENSG00000124207.12chr20+477018194770192347700562477006994770578347705934-0.097000.000000.00010excludedHepG2HNRNPU
A3SSCSE1LENSG00000124207.12chr20+4771271247713489477128854771348947711268477115000.122000.000000.00000longerHepG2SF3A3
A3SSCSE1LENSG00000124207.12chr20+4771271247713489477128854771348947711268477115000.060000.000010.00339longerK562EFTUD2
A3SSCSE1LENSG00000124207.12chr20+4771271247713489477128854771348947711268477115000.242000.000000.00000longerK562SF3B4
A3SSCSE1LENSG00000124207.12chr20+4770053647700699477005624770069947695097476951590.063000.000000.00000longerK562AQR
A3SSCSE1LENSG00000124207.12chr20+4768271047682830476827284768283047679738476798810.085000.000000.00000longerK562AQR
A3SSCSE1LENSG00000124207.12chr20+4771271247713489477128854771348947711268477115000.057000.000030.00027longerK562AQR
A3SSCSE1LENSG00000124207.12chr20+4771271247713489477128854771348947711268477115000.125000.000030.00819longerK562SF3B1
A3SSCSE1LENSG00000124207.12chr20+4771271247713489477128854771348947711268477115000.071000.000000.00001longerHepG2SF3B4
A3SSCSE1LENSG00000124207.12chr20+4771271247713489477128854771348947711268477115000.090000.000000.00000longerK562PRPF8
MXECSE1LENSG00000124207.12chr20+47705783477059344770607447706283477005624770069947707278477073760.093000.000000.000001includedHepG2U2AF1
MXECSE1LENSG00000124207.12chr20+47700562477006994770454547704643476950974769515947705783477059340.124000.000360.009301includedHepG2U2AF1
MXECSE1LENSG00000124207.12chr20+4770181947701923477060744770628347700562477006994770727847707376-0.093000.004720.069442includedHepG2U2AF1
MXECSE1LENSG00000124207.12chr20+4767498947675085476797384767988147662848476629604768272847682830-0.131000.000260.006852includedK562U2AF1
MXECSE1LENSG00000124207.12chr20+4768674147686834476888224768899047685346476853594768910447689234-0.130000.000200.005732includedK562U2AF1
MXECSE1LENSG00000124207.12chr20+47701819477019234770454547704643477005624770069947705783477059340.090000.003650.091411includedK562LIN28B
MXECSE1LENSG00000124207.12chr20+4769351647693601476950974769515947691854476920574770056247700699-0.100000.001650.053962includedK562LIN28B
MXECSE1LENSG00000124207.12chr20+47689104476892344769132147691387476867414768683447691854476920570.051000.000000.000001includedK562AQR
MXECSE1LENSG00000124207.12chr20+47674955476750854768271047682830476628614766296047682901476830470.091000.000000.000001includedK562AQR
MXECSE1LENSG00000124207.12chr20+47679738476798814768272847682830476750004767508547682901476830470.079000.014970.087471includedK562AQR
MXECSE1LENSG00000124207.12chr20+4770181947701923477045454770463447700536477006994770578347705934-0.053000.000000.000002includedK562AQR
MXECSE1LENSG00000124207.12chr20+4770170347701923477045454770463447700562477006994770578347705934-0.788000.002220.018172includedK562AQR
MXECSE1LENSG00000124207.12chr20+4767498947675085476797384767988147662848476629604768272847682830-0.109000.000630.011022includedK562U2AF2
MXECSE1LENSG00000124207.12chr20+47700562477006994770454547704643476950974769515947705783477059340.082000.000240.021471includedK562LARP7
MXECSE1LENSG00000124207.12chr20+47674989476750854767973847679881476628484766296047682728476828300.093000.001900.053101includedK562EFTUD2
MXECSE1LENSG00000124207.12chr20+4767498947675085476797384767988147662848476629604768272847682830-0.095000.000800.084262includedK562SMNDC1
MXECSE1LENSG00000124207.12chr20+4767498947675085476797384767988147662848476629604768272847682830-0.118000.000140.007452includedK562DHX30

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CSE1L is not avaliable on ENCORE database.