COL7A1

General Information

Gene Name       : COL7A1
Gene ID             : ENSG00000114270.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: COL7A1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878COL7A1ENSG00000114270.170.060.160.11ENCSR000AEF
HepG2COL7A1ENSG00000114270.176.222.324.27ENCSR985KAT
K562COL7A1ENSG00000114270.170.120.290.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for COL7A1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • COL7A1 RNA is bound by 9 proteins.  







eCLIP assay for COL7A1 is not avaliable on ENCORE database.





9 proteins are bound to COL7A1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr34860172248601794-3'-UTR,intron-Distal4.630625.29820HepG2LSM11
chr34860172448601792-3'-UTR,intron-Distal4.719796.47877HepG2PABPN1
chr34860159748601663-3'-UTR,intron-Distal3.197703.46578HepG2ZC3H11A
chr34860161348601724-3'-UTR,intron-Distal4.8105013.84708HepG2PABPN1
chr34860157548601642-3'-UTR,intron-Distal4.701785.56405HepG2LSM11
chr34860164248601712-3'-UTR,intron-Distal4.391046.87794HepG2LSM11
chr34862580448625944-CDS,intron-Distal,intron-Proximal4.902898.34521HepG2PRPF4
chr34861250248612555-CDS,intron-Distal,intron-Proximal5.584686.46301HepG2PPIG
chr34860289148602920-CDS,intron-Distal3.975368.10313HepG2PABPN1
chr34860394248603997-CDS,intron-Distal,intron-Proximal4.6475211.53552HepG2PABPN1
chr34860514648605190-CDS,intron-Distal,intron-Proximal4.2729210.46300HepG2PPIG
chr34860528348605316-CDS,intron-Distal,intron-Proximal4.4349012.11762HepG2PPIG
chr34860500948605065-CDS,intron-Distal,intron-Proximal3.399054.34695HepG2BCLAF1
chr34860621748606231-CDS,intron-Distal4.937704.97342HepG2PPIG
chr34860394248603953-CDS,intron-Distal,intron-Proximal3.997663.86355HepG2PPIG
chr34860409248604168-CDS,intron-Distal,intron-Proximal4.587119.53128HepG2PABPN1
chr34861291048612952-CDS,intron-Distal5.232414.67689HepG2PPIG
chr34860680648606878-CDS,intron-Distal,intron-Proximal5.094027.35080HepG2PABPN1
chr34860959748609604-CDS,intron-Distal,intron-Proximal5.316385.56813HepG2PPIG
chr34860621848606265-CDS,intron-Distal4.509055.03717HepG2PABPN1
chr34860527048605283-CDS,intron-Distal,intron-Proximal4.204419.86479HepG2PPIG
chr34860526948605324-CDS,intron-Distal,intron-Proximal4.7678415.96613HepG2PABPN1
chr34860285848602891-CDS,intron-Distal,intron-Proximal5.5645111.16905HepG2PABPN1
chr34861746648617490-CDS,intron-Distal3.747103.22545HepG2PPIG
chr34860552248605554-CDS,intron-Distal,intron-Proximal3.206193.11560HepG2PABPN1
chr34860292048602930-CDS,intron-Distal,intron-Proximal3.251773.86489HepG2PABPN1
chr34860307748603099-CDS,intron-Distal5.261505.86613HepG2PPIG
chr34861855448618579-CDS,intron-Distal,intron-Proximal5.037643.49905HepG2PPIG
chr34861691648616928-CDS,intron-Distal,intron-Proximal4.523903.20743HepG2PPIG
chr34860501048605070-CDS,intron-Distal,intron-Proximal4.6848613.24825HepG2PPIG
chr34860515448605191-CDS,intron-Distal,intron-Proximal4.805355.03746HepG2BCLAF1
chr34861834248618357-CDS,intron-Distal5.208265.27053HepG2PPIG
chr34860680948606874-CDS,intron-Distal3.133944.74766HepG2BCLAF1
chr34861169548611724-CDS,intron-Distal5.369846.46301HepG2PPIG
chr34861192148611965-CDS,intron-Distal5.724957.06060HepG2PPIG
chr34860221748602310-CDS,intron-Distal5.7633011.38041HepG2LSM11
chr34860369948603710-CDS,intron-Distal,intron-Proximal5.441045.86613HepG2PPIG
chr34860757548607611-CDS,intron-Distal,intron-Proximal4.356844.68902HepG2PPIG
chr34861130348611322-CDS,intron-Distal,intron-Proximal5.015934.67689HepG2PPIG
chr34860235048602415-CDS,intron-Distal,intron-Proximal4.7283911.53552HepG2PABPN1
chr34860284648602922-CDS,intron-Distal,intron-Proximal4.863626.36563HepG2LSM11
chr34860703048607078-CDS,intron-Distal,intron-Proximal5.1206511.99167HepG2PPIG
chr34860236348602414-CDS,intron-Distal,intron-Proximal3.520506.13334HepG2LSM11
chr34860770848607758-CDS,intron-Distal,intron-Proximal3.381654.63292HepG2PABPN1
chr34861267248612718-CDS,intron-Distal,intron-Proximal5.919409.35430HepG2EFTUD2
chr34860284348602894-CDS,intron-Distal,intron-Proximal3.271885.10448HepG2PPIG
chr34860395348603995-CDS,intron-Distal,intron-Proximal3.603114.68592HepG2PPIG
chr34860500648605068-CDS,intron-Distal,intron-Proximal6.1476517.11401HepG2PABPN1
chr34860703348607081-CDS,intron-Distal,intron-Proximal3.640573.18660HepG2PABPN1
chr34860438448604424-CDS,intron-Distal4.275303.61671HepG2PABPN1
chr34861016148610170-CDS,intron-Distal4.958614.97342HepG2PPIG
chr34860855048608594-CDS,intron-Distal,intron-Proximal4.144853.05716HepG2PABPN1
chr34860515148605197-CDS,intron-Distal,intron-Proximal4.8109211.53552HepG2PABPN1
chr34861014348610152-CDS,intron-Distal4.673684.08604HepG2PPIG
chr34860223248602313-CDS,intron-Distal6.0293816.40982HepG2PABPN1
chr34860308948603101-CDS,intron-Distal3.736893.18660HepG2PABPN1
chr34861706048617096-CDS,intron-Distal,intron-Proximal4.186454.13746HepG2PPIG
chr34860756848607608-CDS,intron-Distal,intron-Proximal3.417143.44847HepG2PABPN1
chr34860456648604624-CDS,intron-Distal,intron-Proximal4.026869.58474HepG2PPIG
chr34860519048605196-CDS,intron-Distal,intron-Proximal4.462818.12130HepG2PPIG
chr34860981248609830-CDS,intron-Distal,intron-Proximal5.353716.16445HepG2PPIG
chr34860955948609597-CDS,intron-Distal,intron-Proximal6.035209.44903HepG2PPIG
chr34860458448604616-CDS,intron-Distal3.065883.94979HepG2BCLAF1
chr34860683348606878-CDS,intron-Distal3.986537.36645HepG2PPIG
chr34861681948616836-CDS,intron-Distal,intron-Proximal4.919604.67689HepG2PPIG
chr34860943448609478-CDS,intron-Distal,intron-Proximal5.981037.65840HepG2PPIG
chr34861309448613117-CDS,intron-Distal3.966164.68902HepG2PPIG
chr34860552248605560-CDS,intron-Distal,intron-Proximal4.653266.08299HepG2PPIG
chr34860531648605324-CDS,intron-Distal,intron-Proximal4.054934.13746HepG2PPIG
chr34860371048603745-CDS,intron-Distal4.952896.92541HepG2PPIG
chr34861308648613182-CDS,intron-Distal,intron-Proximal3.088853.09811HepG2GRWD1
chr34860433948604384-CDS,intron-Distal,intron-Proximal4.784155.03717HepG2PABPN1
chr34860369848603749-CDS,intron-Distal,intron-Proximal3.899868.37686HepG2PABPN1
chr34862133748621360-CDS,intron-Distal,intron-Proximal4.958614.97342HepG2PPIG
chr34860284248602858-CDS,intron-Distal,intron-Proximal3.397863.18660HepG2PABPN1
chr34861029748610335-CDS,intron-Distal,intron-Proximal4.773866.92541HepG2PPIG
chr34860254148602603-CDS,intron-Distal,intron-Proximal3.954679.20230HepG2PABPN1
chr34860456648604623-CDS,intron-Distal5.242519.69440HepG2PABPN1
chr34862599948626065-intron-Distal,intron-Proximal4.560245.52571HepG2RBFOX2
chr34862584348625957-intron-Distal,intron-Proximal3.881025.03283HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for COL7A1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for COL7A1 is not available on ENCORE database.

  • 136 RBPs can affect the levels of COL7A1.  








The Knockdown/knockout RNA-Seq assay for COL7A1 is not available on ENCORE database.





136 RBPs can affect the gene expression of COL7A1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
COL7A1ENSG00000114270.11240.13770537.75840-1.163105.124603.70510HepG2AATF
COL7A1ENSG00000114270.11714.697201324.41620-0.8900024.2234022.82780HepG2ACO1
COL7A1ENSG00000114270.11156.35140786.74150-2.331105.137704.44110HepG2AKAP1
COL7A1ENSG00000114270.111177.33790502.071601.2295011.409709.44970HepG2BCCIP
COL7A1ENSG00000114270.11736.17540436.171500.755103.111002.15440HepG2BCLAF1
COL7A1ENSG00000114270.11293.81300482.53120-0.715705.567204.52100HepG2CALR
COL7A1ENSG00000114270.11815.404801324.13870-0.6995016.9025015.55940HepG2CKAP4
COL7A1ENSG00000114270.11500.14200352.295700.505504.042702.80900HepG2YBX3
COL7A1ENSG00000114270.11839.88640679.898400.304802.421301.81270HepG2CELF1
COL7A1ENSG00000114270.111023.92200731.114700.485807.254806.13760HepG2DAZAP1
COL7A1ENSG00000114270.11898.603601224.90000-0.446907.301006.05460HepG2DDX19B
COL7A1ENSG00000114270.11319.83670580.46120-0.859903.907002.80920HepG2DDX24
COL7A1ENSG00000114270.11385.23630753.41790-0.967701.838401.31700HepG2DDX3X
COL7A1ENSG00000114270.11937.16200493.687300.924603.340502.50040HepG2DDX55
COL7A1ENSG00000114270.111083.41770638.694200.762307.277405.70930HepG2DDX5
COL7A1ENSG00000114270.111325.71240647.721801.033206.755605.82430HepG2DDX6
COL7A1ENSG00000114270.11981.467701267.11010-0.368504.440003.61940HepG2DKC1
COL7A1ENSG00000114270.11753.37800345.893901.1229021.0600019.31530HepG2DNAJC21
COL7A1ENSG00000114270.11685.01980342.889100.9983010.902609.70530HepG2DNAJC2
COL7A1ENSG00000114270.11471.02520793.27720-0.752007.185205.77330HepG2EEF2
COL7A1ENSG00000114270.11443.22540661.19200-0.577004.561303.13430HepG2EFTUD2
COL7A1ENSG00000114270.111196.86670622.154400.943805.063504.27470HepG2EIF2S1
COL7A1ENSG00000114270.111111.737101419.47140-0.352504.557603.82080HepG2ETF1
COL7A1ENSG00000114270.11737.451301294.20040-0.811405.776204.56570HepG2EWSR1
COL7A1ENSG00000114270.11897.15220375.529801.256306.974005.37240HepG2FTO
COL7A1ENSG00000114270.111539.09410643.590201.2578010.318609.07610HepG2G3BP1
COL7A1ENSG00000114270.111157.74660683.772900.759603.098102.15530HepG2G3BP2
COL7A1ENSG00000114270.11354.37240573.27880-0.694005.595504.31610HepG2GEMIN5
COL7A1ENSG00000114270.11924.40190554.057600.738405.032303.65310HepG2GNB2L1
COL7A1ENSG00000114270.11976.92200424.864501.201103.620302.89670HepG2GPKOW
COL7A1ENSG00000114270.11314.85050514.34010-0.708103.845101.61870HepG2GRWD1
COL7A1ENSG00000114270.111654.481801264.444600.387805.914104.54730HepG2HDGF
COL7A1ENSG00000114270.11212.25980487.24440-1.198802.908101.49320HepG2HLTF
COL7A1ENSG00000114270.11942.45630627.702200.586209.135207.93070HepG2HNRNPF
COL7A1ENSG00000114270.11898.72670666.006800.432205.283104.37710HepG2HNRNPL
COL7A1ENSG00000114270.11650.66070385.876600.7537010.594209.47160HepG2HNRNPU
COL7A1ENSG00000114270.11920.37780618.113800.574304.889903.95340HepG2IGF2BP1
COL7A1ENSG00000114270.111277.33180654.053900.965604.010703.21130HepG2IGF2BP2
COL7A1ENSG00000114270.111135.40680618.219100.876903.082501.67760HepG2ILF3
COL7A1ENSG00000114270.111092.22050605.264600.851502.698201.52360HepG2KHDRBS1
COL7A1ENSG00000114270.111971.41830658.130901.582709.579507.62570HepG2KHSRP
COL7A1ENSG00000114270.11680.38320490.397000.472303.346101.54760HepG2CCAR2
COL7A1ENSG00000114270.11763.90810569.933500.422502.837001.60790HepG2LIN28B
COL7A1ENSG00000114270.11720.56730490.840700.553803.381401.82010HepG2NIP7
COL7A1ENSG00000114270.11993.48720453.568001.131107.200405.42210HepG2NONO
COL7A1ENSG00000114270.111052.19800359.557401.5490025.6353023.71820HepG2NSUN2
COL7A1ENSG00000114270.111598.28980579.787901.4628012.6512010.71770HepG2PABPC1
COL7A1ENSG00000114270.111195.17010635.915200.910204.800103.86050HepG2PABPC4
COL7A1ENSG00000114270.11296.71460381.93120-0.364202.098601.35330HepG2PARN
COL7A1ENSG00000114270.11864.82600344.168201.3292019.3344017.51980HepG2PPIL4
COL7A1ENSG00000114270.11629.13370490.122000.360102.986802.18730HepG2PRPF4
COL7A1ENSG00000114270.111498.77140692.030301.1148022.6898021.20170HepG2PUF60
COL7A1ENSG00000114270.11494.72780734.60220-0.570308.088707.18480HepG2PUM1
COL7A1ENSG00000114270.111182.67490734.077100.687904.148303.33540HepG2PUM2
COL7A1ENSG00000114270.11497.262801349.00530-1.4398055.6950053.65180HepG2PUS1
COL7A1ENSG00000114270.11719.979001186.40670-0.7206011.6721010.76220HepG2RBM22
COL7A1ENSG00000114270.11951.03440659.147600.528805.410204.49600HepG2RBM25
COL7A1ENSG00000114270.111088.89910695.250400.647208.128007.15570HepG2RECQL
COL7A1ENSG00000114270.111229.86000676.094500.863103.753802.97750HepG2RPLP0
COL7A1ENSG00000114270.11787.67030626.608300.329902.104801.56150HepG2RPS19
COL7A1ENSG00000114270.111099.44670637.731000.785702.295501.56560HepG2RPS3A
COL7A1ENSG00000114270.11822.30130343.630501.2587031.0505029.22580HepG2SAFB2
COL7A1ENSG00000114270.11325.630501343.99520-2.0452035.6286033.18970HepG2SF3A3
COL7A1ENSG00000114270.11543.74700401.295300.438202.563801.88220HepG2SF3B1
COL7A1ENSG00000114270.111866.87300663.511101.4923076.2871073.80560HepG2SLBP
COL7A1ENSG00000114270.11770.93430400.714900.9439019.2590017.79580HepG2SMN1
COL7A1ENSG00000114270.111175.762201339.98720-0.188601.760501.33300HepG2SRFBP1
COL7A1ENSG00000114270.11212.97910728.76440-1.7747012.5967011.74620HepG2SRSF1
COL7A1ENSG00000114270.111470.18240683.256901.1054033.4989031.65970HepG2SRSF5
COL7A1ENSG00000114270.11878.66880616.674900.510701.989001.38800HepG2SRSF7
COL7A1ENSG00000114270.111757.07030592.939601.5671061.4087059.50290HepG2SRSF9
COL7A1ENSG00000114270.111578.464701163.399000.440107.351406.59280HepG2SSB
COL7A1ENSG00000114270.111757.14400777.070401.1770046.6084044.61180HepG2SUCLG1
COL7A1ENSG00000114270.112435.98030491.385402.3095059.3915057.11550HepG2SUPV3L1
COL7A1ENSG00000114270.11562.266101101.19040-0.969703.003901.89270HepG2TBRG4
COL7A1ENSG00000114270.11760.44230601.870900.337302.166301.42490HepG2TIA1
COL7A1ENSG00000114270.111308.20300374.889501.8029030.1621028.83620HepG2TIAL1
COL7A1ENSG00000114270.111210.76910378.307001.6782038.7098036.90660HepG2TRIM56
COL7A1ENSG00000114270.111079.98290676.054000.675706.442005.02320HepG2TUFM
COL7A1ENSG00000114270.11382.45710849.70120-1.151702.976202.32550HepG2U2AF1
COL7A1ENSG00000114270.111219.54420715.572600.769102.901302.04480HepG2UBE2L3
COL7A1ENSG00000114270.11677.13870290.226901.2222014.7071012.99010HepG2UCHL5
COL7A1ENSG00000114270.111432.621301191.918900.265302.998902.27740HepG2UPF1
COL7A1ENSG00000114270.11793.84960449.767300.819603.760702.57410HepG2UPF2
COL7A1ENSG00000114270.11775.825501225.12110-0.6591011.659009.70820HepG2UTP18
COL7A1ENSG00000114270.11468.304401150.74990-1.2971038.2327036.38210HepG2UTP3
COL7A1ENSG00000114270.111163.98210483.717301.2667017.3440015.57040HepG2XRN2
COL7A1ENSG00000114270.11711.64380483.669900.557007.178106.17890HepG2ZC3H8
COL7A1ENSG00000114270.111626.361101310.881700.311004.865804.19240HepG2ZNF622
COL7A1ENSG00000114270.11203.7403045.105002.1753016.6434013.89900K562ABCF1
COL7A1ENSG00000114270.11103.0346057.568300.839702.694402.13250K562AGGF1
COL7A1ENSG00000114270.11146.2202059.903501.287306.732605.67870K562AKAP8L
COL7A1ENSG00000114270.11430.3725053.798102.9999044.5734042.46830K562AQR
COL7A1ENSG00000114270.11171.7200051.402201.7401012.6963010.60670K562BCLAF1
COL7A1ENSG00000114270.11157.0200031.428602.3207015.1495012.04110K562BUD13
COL7A1ENSG00000114270.1179.8498025.158501.666104.595603.16350K562CCAR1
COL7A1ENSG00000114270.11141.3144068.793501.038504.843303.24520K562CCDC124
COL7A1ENSG00000114270.11266.0085063.454602.0676013.9596010.82930K562CKAP4
COL7A1ENSG00000114270.11412.8489064.623102.6754027.0728024.09050K562CNOT7
COL7A1ENSG00000114270.11155.3942056.121201.469203.764302.46480K562CPEB4
COL7A1ENSG00000114270.11197.3508029.346102.7494023.2187020.90290K562CPSF6
COL7A1ENSG00000114270.11144.6739026.889802.4276012.337908.76040K562CPSF7
COL7A1ENSG00000114270.1188.0431027.474001.680006.271803.62770K562YBX3
COL7A1ENSG00000114270.11139.1857038.996201.835509.477107.37000K562CSTF2
COL7A1ENSG00000114270.11422.2862091.055602.213305.051203.72590K562CELF1
COL7A1ENSG00000114270.1174.0376026.524301.480804.569402.19540K562DDX1
COL7A1ENSG00000114270.1194.1368045.120801.060903.387601.90750K562DDX27
COL7A1ENSG00000114270.1184.0005039.851201.075703.508902.31660K562DDX3X
COL7A1ENSG00000114270.11173.3935058.071201.5781011.156309.94510K562DDX47
COL7A1ENSG00000114270.11117.3700028.170602.0587010.605607.84470K562DHX30
COL7A1ENSG00000114270.11129.2768027.051502.2566012.8942010.33270K562DNAJC21
COL7A1ENSG00000114270.11119.8423028.673502.063208.896105.91400K562DNAJC2
COL7A1ENSG00000114270.11224.5479036.640502.6154022.6673019.67500K562EFTUD2
COL7A1ENSG00000114270.1184.4289048.771100.791602.083701.44450K562EIF2S2
COL7A1ENSG00000114270.11141.5201039.200301.852008.835706.83030K562EIF3D
COL7A1ENSG00000114270.11241.7908073.982501.7084013.4184011.43750K562EIF4G2
COL7A1ENSG00000114270.11193.0077034.505702.483705.017802.75540K562ESF1
COL7A1ENSG00000114270.11221.8074046.857102.2429016.4969013.54050K562EXOSC5
COL7A1ENSG00000114270.1196.9857032.439001.579903.225302.30670K562FIP1L1
COL7A1ENSG00000114270.11197.9635029.873202.7282021.3057018.86490K562FMR1
COL7A1ENSG00000114270.11248.8970025.326503.2967033.8796030.75070K562FTO
COL7A1ENSG00000114270.11133.6362036.737701.862908.785506.23960K562GEMIN5
COL7A1ENSG00000114270.11200.4751039.738002.3347022.4037019.76700K562GLRX3
COL7A1ENSG00000114270.11218.8950028.012302.9660026.6884024.02830K562GPKOW
COL7A1ENSG00000114270.11448.3221064.990102.7861013.2310011.55850K562GRSF1
COL7A1ENSG00000114270.1180.5353029.058801.470504.134701.70190K562HLTF
COL7A1ENSG00000114270.11147.9198057.976001.351205.160202.72220K562HNRNPA0
COL7A1ENSG00000114270.11210.2857065.490801.6829013.1844011.12360K562HNRNPA1
COL7A1ENSG00000114270.11305.4534060.472302.3365019.1945015.90390K562HNRNPAB
COL7A1ENSG00000114270.11173.9849028.729102.5983018.5701017.10210K562HNRNPC
COL7A1ENSG00000114270.1187.4324025.657101.768706.311204.49860K562HNRNPF
COL7A1ENSG00000114270.11111.4966052.480701.087004.298302.95060K562HNRNPL
COL7A1ENSG00000114270.11218.5047072.498801.5915010.856809.11390K562HNRNPU
COL7A1ENSG00000114270.1195.7910026.290001.865303.291801.65200K562ILF3
COL7A1ENSG00000114270.11123.9786025.391602.2876013.3723010.40430K562KHDRBS1
COL7A1ENSG00000114270.11145.9025063.568601.198504.486403.39830K562KIF1C
COL7A1ENSG00000114270.11126.5088023.934602.402005.568004.18520K562KRR1
COL7A1ENSG00000114270.11206.8274027.345702.9189010.459408.67940K562METAP2
COL7A1ENSG00000114270.11366.0012078.843602.214703.273102.04010K562MSI2
COL7A1ENSG00000114270.11308.5942041.781402.8847030.2799028.08120K562MTPAP
COL7A1ENSG00000114270.11436.4443046.411403.2331056.2424053.61970K562NSUN2
COL7A1ENSG00000114270.11307.8343062.083802.3098018.8262015.78150K562PABPC1
COL7A1ENSG00000114270.11114.8135025.228702.1861010.137706.26670K562PARN
COL7A1ENSG00000114270.11141.8936059.601601.251303.755202.78530K562PCBP3
COL7A1ENSG00000114270.1181.5470036.837201.146403.562002.61210K562PPIG
COL7A1ENSG00000114270.11452.2348080.708902.486204.448103.41960K562PUF60
COL7A1ENSG00000114270.11263.9904085.928901.619209.214307.19860K562PUM1
COL7A1ENSG00000114270.11377.8763084.109302.1675013.2334011.14410K562PUM2
COL7A1ENSG00000114270.11217.2504059.399701.870703.479702.88170K562PUS1
COL7A1ENSG00000114270.1191.7300026.849301.772406.518803.44870K562RBFOX2
COL7A1ENSG00000114270.11105.3516057.882800.863902.898002.29260K562RBM15
COL7A1ENSG00000114270.1152.4078025.182901.057202.316801.55260K562RBM22
COL7A1ENSG00000114270.1177.4532036.297701.093302.435001.67000K562RPS19
COL7A1ENSG00000114270.11198.0887058.861901.750609.651406.76720K562SBDS
COL7A1ENSG00000114270.11261.7766045.813302.514405.090504.00950K562SF3A3
COL7A1ENSG00000114270.11165.1634026.662302.630907.185305.56880K562SF3B1
COL7A1ENSG00000114270.11124.6273027.699102.169604.245502.65320K562SLBP
COL7A1ENSG00000114270.11116.5644035.634501.709707.420304.59280K562SRP68
COL7A1ENSG00000114270.1197.9237046.938201.060803.759802.68720K562SRPK2
COL7A1ENSG00000114270.1166.8290025.710301.378003.731702.91580K562SRSF1
COL7A1ENSG00000114270.11410.72030222.005300.887504.228102.76110K562SRSF7
COL7A1ENSG00000114270.11378.8850057.606902.7173022.1136018.01240K562STIP1
COL7A1ENSG00000114270.11136.9725034.483201.989809.643907.68550K562SUPV3L1
COL7A1ENSG00000114270.1118.7759045.85650-1.288202.602401.80910K562SYNCRIP
COL7A1ENSG00000114270.11129.5304024.775702.3862013.1941011.05060K562TIAL1
COL7A1ENSG00000114270.11108.2678026.324002.040109.415107.43150K562TRIM56
COL7A1ENSG00000114270.11151.9062037.899202.0028012.421509.47300K562TRIP6
COL7A1ENSG00000114270.11207.4042091.066401.187403.397401.82370K562UBE2L3
COL7A1ENSG00000114270.11143.5938036.516101.9753010.028508.04170K562UCHL5
COL7A1ENSG00000114270.11303.2072049.211902.623105.006904.07070K562UPF1
COL7A1ENSG00000114270.11149.0286060.233401.306903.809402.21460K562UTP18
COL7A1ENSG00000114270.11171.5314030.011102.5148018.5365015.89270K562UTP3
COL7A1ENSG00000114270.11206.7901042.107602.2959015.8427013.72910K562WDR3
COL7A1ENSG00000114270.11150.5773043.797201.7815012.5851010.94010K562WDR43
COL7A1ENSG00000114270.11121.7722063.772600.933103.677202.18000K562WRN
COL7A1ENSG00000114270.11157.9511037.215002.0854012.606509.70120K562XRN2
COL7A1ENSG00000114270.11348.8328060.589702.525307.175005.67300K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for COL7A1 is not available on ENCORE database.





6 RBPs can affect the splicing of COL7A1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RICOL7A1ENSG00000114270.11chr3-486075664860776748607566486076114860770748607767-0.791000.000070.01121excludedK562NSUN2
RICOL7A1ENSG00000114270.11chr3-486075664860776748607566486076114860770748607767-0.802000.000300.04256excludedK562UPF1
RICOL7A1ENSG00000114270.11chr3-486075664860776748607566486076114860770748607767-0.766000.001160.08153excludedK562MTPAP
RICOL7A1ENSG00000114270.11chr3-4860867548609478486086754860871148609433486094780.236000.012670.09286includedHepG2RBM22
RICOL7A1ENSG00000114270.11chr3-4860756648607767486075664860761148607707486077670.155000.000330.00513includedHepG2RBM22
RICOL7A1ENSG00000114270.11chr3-486109354861115848610935486109904861112248611158-0.155000.002920.04321excludedHepG2SRSF9
RICOL7A1ENSG00000114270.11chr3-4860867548609478486086754860871148609433486094780.389000.000660.00962includedHepG2HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for COL7A1 is not avaliable on ENCORE database.