CTNND1

General Information

Gene Name       : CTNND1
Gene ID             : ENSG00000198561.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CTNND1)


Antibody Validation

 View validation images for all CTNND1 antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CTNND1ENSG00000198561.1327.1824.1025.64ENCSR000AEF
HepG2CTNND1ENSG00000198561.1397.60108.73103.16ENCSR985KAT
K562CTNND1ENSG00000198561.1334.1136.9335.52ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
CTNND1ENCAB598HFHA300-976A1Released, ENCODE4BGKcLV35-19, Released, ENCODE4
CTNND1ENCAB264PINA300-978A1Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
CTNND1K562CRISPRBGKcLV28-49,BGKcLV28-50BGKcLV28-1,BGKcLV28-244.2,45.8NotSatisfiedENCODE4
CTNND1K562CRISPRCTNND1-BGKcLV35-19,CTNND1-BGKcLV35-20NT-BGKcLV35-1,NT-BGKcLV35-265.4,55.1SubmittingENCORE2
CTNND1HepG2CRISPRBGHcLV29-49,BGHcLV29-50BGHcLV29-1,BGHcLV29-2no clear band,NotSatisfiedENCODE4
CTNND1HepG2CRISPRBGHcLV34-17,BGHcLV34-18BGHcLV34-1,BGHcLV34-2no clear band,NotSatisfiedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
CTNND1Product_ID: A300-976A
Lot_ID: 1
Source: Bethyl Labs
Target Name: CTNND1-human		 Bethyl_A300-976A_1_CTNND1.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the CTNND1 specific antibody, A300-976A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the CTNND1-specific antibody, A300-976A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 CTNND1-K562-CRISPR-A300-976A.png<br>Caption: Western blot following CRISPR against CTNND1 in K562 whole cell lysate using CTNND1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against CTNND1. CTNND1 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
CTNND1Product_ID: A300-978A
Lot_ID: 1
Source: Bethyl Labs
Target Name: CTNND1-human		 Bethyl_A300-978A_1_CTNND1.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the CTNND1 specific antibody, A300-978A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the CTNND1-specific antibody, A300-978A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.








RNA Targets

  • eCLIP assay for CTNND1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CTNND1 RNA is bound by 56 proteins.  







eCLIP assay for CTNND1 is not avaliable on ENCORE database.





56 proteins are bound to CTNND1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr115758294057583013+3'-UTR,CDS,intron-Proximal4.1217615.18162HepG2PRPF8
chr115756149757561523+3'-UTR,CDS,intron-Distal3.217413.34848HepG2PPIG
chr115755904057559095+3'-UTR,5'-UTR,CDS,intron-Distal3.782406.23800K562SRSF1
chr115758392657583959+3'-UTR4.061418.51568HepG2PCBP2
chr115758385057583912+3'-UTR3.236464.18458HepG2G3BP1
chr115758550457585605+3'-UTR,intron-Proximal4.3368522.27443K562TIA1
chr115758468957584735+3'-UTR3.210036.29090HepG2PCBP2
chr115756920457569214+3'-UTR,CDS,intron-Proximal3.192523.24162HepG2G3BP1
chr115758502357585036+3'-UTR3.545373.37083K562UPF1
chr115758553057585563+3'-UTR5.2126461.49349HepG2PCBP2
chr115758591257585970+3'-UTR5.371058.07480K562FMR1
chr115758337557583432+3'-UTR,CDS,intron-Distal,intron-Proximal4.493344.70434HepG2RBFOX2
chr115758563757585720+3'-UTR3.735787.83724K562MATR3
chr115756913257569237+3'-UTR,CDS,intron-Proximal3.730168.07956K562SF3B4
chr115758550057585582+3'-UTR,intron-Proximal4.504747.20195HepG2TIA1
chr115755890557558991+3'-UTR,CDS,intron-Distal,intron-Proximal4.3066240.35734HepG2U2AF2
chr115756303557563079+3'-UTR,CDS,intron-Distal,intron-Proximal3.092114.07145K562U2AF2
chr115755895957558994+3'-UTR,CDS,intron-Distal,intron-Proximal4.244715.22147HepG2SRSF1
chr115758549757585601+3'-UTR,intron-Proximal3.053973.34361HepG2UPF1
chr115755896257559062+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.028749.11858HepG2GRWD1
chr115758336257583422+3'-UTR,CDS,intron-Distal,intron-Proximal5.2765417.07930HepG2QKI
chr115758549557585577+3'-UTR,intron-Proximal3.6292720.94013K562PCBP1
chr115758385557583905+3'-UTR3.523539.94927K562TIA1
chr115758485757584887+3'-UTR3.2665411.69940K562PUM2
chr115755885757558906+3'-UTR,intron-Distal,intron-Proximal4.2268813.51643HepG2PTBP1
chr115758337557583421+3'-UTR,CDS,intron-Distal,intron-Proximal4.052887.81467HepG2U2AF2
chr115758323357583262+3'-UTR,intron-Distal3.048674.85249HepG2U2AF2
chr115758550857585589+3'-UTR,intron-Proximal4.1320614.73233K562MATR3
chr115758474057584782+3'-UTR4.5031036.06866K562PUM2
chr115758485457584906+3'-UTR3.4979915.87176K562TIA1
chr115758436457584472+3'-UTR3.295055.22257HepG2UPF1
chr115755906257559143+3'-UTR,5'-UTR,CDS,intron-Distal3.2343610.47321HepG2GRWD1
chr115758536857585412+3'-UTR3.706707.85750K562TIA1
chr115758479457584844+3'-UTR4.2715525.09657HepG2PCBP2
chr115758549457585530+3'-UTR,intron-Proximal6.0115673.89452HepG2PCBP2
chr115758480157584845+3'-UTR3.380013.47114HepG2UPF1
chr115758591357585955+3'-UTR3.076403.72898HepG2CSTF2
chr115758395957584027+3'-UTR3.9004510.52045HepG2PCBP2
chr115758578357585847+3'-UTR3.140698.44625K562PTBP1
chr115758543957585471+3'-UTR,intron-Proximal4.345388.14483HepG2PCBP2
chr115758580457585822+3'-UTR3.287384.30137HepG2PTBP1
chr115756142957561507+3'-UTR,CDS,intron-Distal,intron-Proximal4.1286018.31918HepG2SF3A3
chr115758563457585741+3'-UTR3.2219920.37509HepG2PTBP1
chr115758549657585540+3'-UTR,intron-Proximal3.8560730.12801HepG2PTBP1
chr115758315857583215+3'-UTR,intron-Distal3.341365.91877HepG2QKI
chr115755890957558998+3'-UTR,CDS,intron-Distal,intron-Proximal3.285053.61570K562SRSF1
chr115758549857585584+3'-UTR,intron-Proximal3.4248211.76619HepG2MATR3
chr115756918057569263+3'-UTR,CDS,intron-Proximal3.3835716.47502HepG2U2AF2
chr115758579257585850+3'-UTR4.302358.66158K562TIA1
chr115758480657584849+3'-UTR5.84437400.00000K562PUM2
chr115755882657558898+3'-UTR,intron-Distal,intron-Proximal3.414039.27693HepG2U2AF1
chr115758503257585115+3'-UTR3.106605.50923K562IGF2BP1
chr115758485257584894+3'-UTR3.724265.24350K562PCBP1
chr115755899057559046+3'-UTR,5'-UTR,CDS,intron-Distal3.392076.97987K562ZNF622
chr115758375757583814+3'-UTR,CDS,intron-Proximal3.6515711.19814HepG2U2AF2
chr115758570657585740+3'-UTR3.520135.02233K562PTBP1
chr115758550257585574+3'-UTR,intron-Proximal3.194155.13651HepG2AKAP1
chr115758486857584895+3'-UTR3.195419.38767HepG2PCBP2
chr115758307457583196+3'-UTR,intron-Distal3.406573.29251K562KHSRP
chr115758554057585589+3'-UTR4.6099049.44324HepG2PTBP1
chr115758337157583425+3'-UTR,CDS,intron-Distal,intron-Proximal3.706343.25055K562U2AF2
chr115758478257584806+3'-UTR6.0940276.34569K562PUM2
chr115758464257584713+3'-UTR4.6787141.51042K562PUM2
chr115758549657585595+3'-UTR,intron-Proximal3.092306.75385HepG2HNRNPK
chr115758406757584115+3'-UTR4.518784.20997HepG2UPF1
chr115758537757585424+3'-UTR,intron-Proximal3.146643.75706HepG2PCBP2
chr115755890757558977+3'-UTR,CDS,intron-Distal,intron-Proximal3.354524.35567K562U2AF1
chr115758550157585576+3'-UTR,intron-Proximal4.8786019.54509HepG2PCBP1
chr115758549957585594+3'-UTR,intron-Proximal4.9033553.22537K562PTBP1
chr115758547157585489+3'-UTR,intron-Proximal5.009869.27589HepG2PCBP2
chr115755882057558905+3'-UTR,intron-Distal,intron-Proximal3.8233438.92409HepG2U2AF2
chr115758479557584851+3'-UTR4.9895213.59352K562PCBP1
chr115758396257584014+3'-UTR3.005333.01207K562IGF2BP2
chr115756914057569212+3'-UTR,CDS,intron-Proximal4.141846.28719HepG2SF3A3
chr115755891057558986+3'-UTR,CDS,intron-Distal,intron-Proximal3.335199.66720K562U2AF2
chr115758560557585639+3'-UTR3.183736.71887K562TIA1
chr115758595557586033+3'-UTR3.577166.46557HepG2CSTF2
chr115758342557583493+3'-UTR,CDS,intron-Distal,intron-Proximal3.317594.40834HepG2QKI
chr115755906557559134+3'-UTR,5'-UTR,CDS,intron-Distal3.834423.36483HepG2G3BP1
chr115758469557584752+3'-UTR3.551524.14151K562PCBP1
chr115758484857584868+3'-UTR3.039907.35530HepG2PCBP2
chr115758481457584890+3'-UTR3.999116.74978HepG2PCBP1
chr115758473557584779+3'-UTR3.423445.65378HepG2PCBP2
chr115752933757529379+5'-UTR,intron-Distal3.041145.11643K562ZNF622
chr115753142457531477+5'-UTR,intron-Distal4.6063711.58327HepG2HNRNPM
chr115752928757529397+5'-UTR,intron-Distal3.220276.14590HepG2DDX3X
chr115752930557529430+5'-UTR,intron-Distal3.2796214.13045HepG2NCBP2
chr115752931157529508+5'-UTR,intron-Distal3.125966.77627K562FTO
chr115752949757529569+5'-UTR,intron-Distal,intron-Proximal3.610674.79866HepG2PRPF8
chr115756395557564010+CDS,intron-Distal3.295467.66537HepG2GRWD1
chr115757884157578905+CDS,intron-Proximal3.096405.12057K562AQR
chr115756396757564006+CDS,intron-Distal3.676218.74800HepG2BCLAF1
chr115757109157571188+CDS,intron-Proximal3.4151011.99332K562UCHL5
chr115757335457573468+CDS3.1542615.21431HepG2GRWD1
chr115757895357579001+CDS,intron-Proximal3.729085.83621K562AQR
chr115757338657573447+CDS3.228558.60702K562UCHL5
chr115756935157569425+CDS3.0673710.34472K562ZNF622
chr115756404557564134+CDS,intron-Distal3.019486.20058HepG2ZNF800
chr115756420857564335+CDS,intron-Distal4.3650512.57266K562FXR2
chr115757442057574445+CDS3.311398.01569HepG2BCLAF1
chr115757441457574453+CDS3.089144.56843HepG2HLTF
chr115756965057569669+CDS,intron-Proximal3.310639.52893HepG2BCLAF1
chr115756965457569728+CDS,intron-Proximal3.411954.07440K562PRPF8
chr115757895357579005+CDS,intron-Proximal4.346737.46483HepG2PRPF8
chr115757443657574491+CDS,intron-Proximal4.342075.13777HepG2PRPF8
chr115756954757569592+CDS3.315673.72080K562FXR2
chr115757439257574457+CDS,intron-Proximal3.357199.01025HepG2PPIG
chr115757586257575903+CDS4.069467.81467HepG2U2AF2
chr115756422757564325+CDS,intron-Distal3.8710212.47800K562FMR1
chr115756936657569454+CDS3.3324311.42192HepG2G3BP1
chr115757757757577616+CDS,intron-Proximal3.254964.63145K562BUD13
chr115757109257571103+CDS,intron-Proximal3.257168.43208HepG2BCLAF1
chr115757590757576006+CDS3.284269.01025HepG2PPIG
chr115756418857564227+CDS,intron-Distal4.147857.34999K562FMR1
chr115756956357569653+CDS3.8456012.61799HepG2G3BP1
chr115756401457564148+CDS,intron-Distal4.0940810.64024HepG2RBM15
chr115756412657564304+CDS,intron-Distal3.0636711.28901K562RPS3
chr115757761857577684+CDS3.5316617.09012HepG2BCLAF1
chr115756426557564367+CDS,intron-Distal3.390718.88582K562BUD13
chr115756440957564462+CDS,intron-Distal4.0021210.44976K562FXR2
chr115757441757574454+CDS3.672534.19073HepG2ZNF800
chr115755912157559202+3'-UTR,CDS,intron-Distal,intron-Proximal3.2261110.41507HepG2PRPF8
chr115757675957576792+CDS3.745425.41973HepG2G3BP1
chr115757388657573937+CDS,intron-Distal,intron-Proximal4.775855.39854K562PTBP1
chr115756416157564217+CDS,intron-Distal4.014694.69290HepG2RPS3
chr115756934157569378+CDS3.237838.57817HepG2GRWD1
chr115757220957572247+CDS3.5337811.34372HepG2BCLAF1
chr115756959257569644+CDS5.115826.43970K562FXR2
chr115757221557572253+CDS,intron-Proximal4.184867.39306HepG2PPIG
chr115756431857564387+CDS,intron-Distal3.772563.11730HepG2DGCR8
chr115756402457564134+CDS,intron-Distal3.650258.10606K562RBM15
chr115757594057575988+CDS3.725367.97516HepG2GRWD1
chr115756922257569292+CDS3.426015.58967HepG2RBM15
chr115757757957577601+CDS,intron-Proximal3.680873.09866HepG2FXR2
chr115756426757564376+CDS,intron-Distal3.1307811.55469HepG2GRWD1
chr115757567957575728+CDS3.741594.49000K562FXR2
chr115758174257581883+CDS,intron-Distal,intron-Proximal3.3779111.88286HepG2AQR
chr115757350257573551+CDS,intron-Proximal3.360595.75231K562AQR
chr115756923357569311+CDS4.5361210.60617K562FMR1
chr115757113857571177+CDS4.4799512.33052HepG2GRWD1
chr115757583957575899+CDS,intron-Proximal3.619066.65114HepG2PRPF8
chr115756943257569488+CDS4.433924.82934K562RBM15
chr115756937857569433+CDS4.2939719.18094HepG2GRWD1
chr115757563557575649+CDS,intron-Proximal3.744184.13746HepG2PPIG
chr115757216757572246+CDS3.324806.40565K562DDX24
chr115757568957575739+CDS3.488138.99805HepG2BCLAF1
chr115756959257569668+CDS4.046636.70275K562RBM15
chr115756405857564148+CDS,intron-Distal3.509723.61371K562SND1
chr115756440757564460+CDS,intron-Distal5.0347113.69082K562FMR1
chr115757335757573455+CDS3.948937.71112HepG2LIN28B
chr115757675257576787+CDS3.280616.50801HepG2BCLAF1
chr115756941657569488+CDS3.260016.09035HepG2HLTF
chr115756419457564378+CDS,intron-Distal3.5742417.31811HepG2G3BP1
chr115755914457559179+3'-UTR,CDS,intron-Distal,intron-Proximal3.086453.13705K562BUD13
chr115757225157572306+CDS,intron-Proximal4.181377.30031K562AQR
chr115757111157571265+CDS3.859838.03230HepG2ZNF800
chr115756954257569575+CDS4.032893.81597K562RBM15
chr115756926057569374+CDS3.126027.60818K562RBM15
chr115757681957576887+CDS3.317285.19933HepG2ZNF800
chr115756961157569669+CDS,intron-Proximal3.315107.58409K562UCHL5
chr115757766457577733+CDS,intron-Proximal4.427654.75655HepG2PRPF8
chr115756947357569563+CDS3.835229.77639HepG2G3BP1
chr115756421857564366+CDS,intron-Distal3.1453910.68837HepG2EIF3H
chr115757117857571233+CDS3.6998612.74130HepG2GRWD1
chr115756946757569551+CDS4.494054.25199K562GRWD1
chr115756951257569587+CDS3.556446.37586K562FMR1
chr115756955057569664+CDS3.782725.50142HepG2ZNF800
chr115756943357569510+CDS3.5030611.50610HepG2GRWD1
chr115756935857569440+CDS3.2341220.25773HepG2BCLAF1
chr115756921857569374+CDS3.8954213.22144K562FXR2
chr115756965157569701+CDS,intron-Proximal4.527027.13970HepG2PRPF8
chr115757335257573456+CDS,intron-Proximal3.704278.30875K562LIN28B
chr115757115957571273+CDS3.928003.04123K562LIN28B
chr115757109257571135+CDS,intron-Proximal3.680874.48452HepG2FXR2
chr115756441757564467+CDS,intron-Distal,intron-Proximal3.936563.51664K562RBM15
chr115756931157569392+CDS5.6192110.56686K562FMR1
chr115758180157581840+CDS,intron-Distal3.071384.79633HepG2G3BP1
chr115756308657563194+CDS,intron-Distal3.331288.63665K562SRSF1
chr115757573857575763+CDS4.082728.92352HepG2GRWD1
chr115757438657574414+CDS,intron-Proximal3.388688.30798HepG2G3BP1
chr115757444557574455+CDS3.211505.60182HepG2BCLAF1
chr115757757957577620+CDS,intron-Proximal5.296995.73530K562DDX24
chr115754372057543763+intron-Distal3.607844.31711K562EXOSC5
chr115756687057566922+intron-Distal3.373617.63765HepG2HNRNPM
chr115754608757546158+intron-Distal4.1869523.57127HepG2HNRNPM
chr115754325657543384+intron-Distal3.299677.58877HepG2SFPQ
chr115754604657546087+intron-Distal3.915677.98764K562HNRNPM
chr115756902957569110+intron-Distal,intron-Proximal3.391858.60263HepG2QKI
chr115754019857540407+intron-Distal5.5207124.58054K562MATR3
chr115757398557574057+intron-Distal,intron-Proximal3.866923.35850HepG2TIAL1
chr115753311257533158+intron-Distal4.0631910.47897HepG2ILF3
chr115755984057559887+intron-Distal3.513455.72074K562TARDBP
chr115757391957573929+intron-Distal,intron-Proximal5.035354.20763HepG2U2AF2
chr115754544057545469+intron-Distal3.4288011.07501HepG2SUGP2
chr115754604357546087+intron-Distal4.1132218.69670HepG2HNRNPM
chr115756614957566196+intron-Distal4.352897.68916HepG2HNRNPM
chr115754620457546335+intron-Distal3.688975.78669HepG2EXOSC5
chr115755920757559259+intron-Distal,intron-Proximal3.739703.43841HepG2TIA1
chr115755165757551705+intron-Distal3.645255.47956HepG2ILF3
chr115754566057545699+intron-Distal4.4956515.07450HepG2HNRNPM
chr115755988757559987+intron-Distal4.9392919.29133K562TARDBP
chr115754037957540426+intron-Distal4.5926810.00695HepG2PTBP1
chr115756840757568462+intron-Distal3.8629712.87079HepG2HNRNPM
chr115754623457546273+intron-Distal3.0108113.56825HepG2SUGP2
chr115754455157544598+intron-Distal3.153553.13650K562HNRNPA1
chr115754608757546151+intron-Distal4.1932714.34683K562HNRNPM
chr115754636157546411+intron-Distal4.026239.75195K562HNRNPM
chr115754658157546651+intron-Distal3.5487414.02675HepG2SUGP2
chr115753702357537098+intron-Distal3.8140626.33109HepG2PTBP1
chr115754685357546912+intron-Distal3.077144.70948K562PTBP1
chr115754557957545607+intron-Distal3.402846.69536HepG2HNRNPM
chr115754556857545600+intron-Distal3.414893.84001K562HNRNPM
chr115753703857537188+intron-Distal3.094836.15155K562MATR3
chr115756812457568207+intron-Distal4.4903815.26304K562HNRNPM
chr115755879957558857+intron-Distal,intron-Proximal3.689979.49508HepG2PTBP1
chr115754636857546413+intron-Distal4.779186.08869K562EXOSC5
chr115754032157540378+intron-Distal4.2047637.74280HepG2PTBP1
chr115754555457545600+intron-Distal3.6784111.47178HepG2SUGP2
chr115756811957568208+intron-Distal5.6109334.98229HepG2HNRNPM
chr115756831057568391+intron-Distal4.552388.37039HepG2HNRNPM
chr115756877457568824+intron-Distal3.319156.20329HepG2HNRNPM
chr115754477057544784+intron-Distal3.460688.08525HepG2HNRNPC
chr115754649657546524+intron-Distal3.868966.29761HepG2MATR3
chr115754032357540406+intron-Distal5.8074240.90023K562PTBP1
chr115755914657559191+intron-Distal,intron-Proximal4.153074.98250K562AQR
chr115754549157545529+intron-Distal3.3424316.71005HepG2SUGP2
chr115757367557573783+intron-Distal4.463333.91671HepG2RBFOX2
chr115754615857546183+intron-Distal4.2625413.92953HepG2HNRNPM
chr115752989857529966+intron-Distal3.775969.05686HepG2RBFOX2
chr115754373057543775+intron-Distal4.263383.01994HepG2GTF2F1
chr115754619557546251+intron-Distal5.6130046.85611HepG2HNRNPM
chr115754568257545718+intron-Distal3.3184510.05767HepG2SUGP2
chr115755981157559867+intron-Distal3.712134.94813HepG2HNRNPM
chr115754369957543838+intron-Distal4.183405.12778HepG2PCBP2
chr115754630057546352+intron-Distal3.699748.75714K562HNRNPM
chr115754571857545819+intron-Distal3.4679626.20145HepG2SUGP2
chr115756680357566847+intron-Distal4.0462910.29681HepG2HNRNPM
chr115754478457544822+intron-Distal3.505098.30313HepG2HNRNPC
chr115754770557547764+intron-Distal3.374743.84371HepG2HNRNPC
chr115753702457537084+intron-Distal5.1085713.62123K562PTBP1
chr115754566257545702+intron-Distal3.220333.72827K562HNRNPM
chr115754560057545645+intron-Distal4.1533717.64483HepG2SUGP2
chr115756176557561843+intron-Distal3.125345.19836HepG2U2AF2
chr115754022157540321+intron-Distal3.4430521.37060HepG2PTBP1
chr115754636257546398+intron-Distal4.5140612.90099HepG2HNRNPM
chr115756686957566928+intron-Distal4.138413.54147K562HNRNPM
chr115753173157531812+intron-Distal4.303673.43967HepG2TAF15
chr115755918257559218+intron-Distal,intron-Proximal4.155403.98488K562TIA1
chr115754451857544582+intron-Distal4.395624.80665HepG2QKI
chr115754378957543855+intron-Distal3.230395.02053K562EXOSC5
chr115754644757546456+intron-Distal3.029086.57022HepG2SUGP2
chr115754609657546133+intron-Distal4.539193.66322HepG2EXOSC5
chr115757398257574066+intron-Distal,intron-Proximal3.451866.88394K562RBFOX2
chr115756840457568453+intron-Distal3.177543.91899K562EXOSC5
chr115753709657537195+intron-Distal3.5050814.34401HepG2U2AF2
chr115754546957545491+intron-Distal3.4265515.62118HepG2SUGP2
chr115756875057568820+intron-Distal4.900326.73731K562EXOSC5
chr115755172357551837+intron-Distal3.6871510.41778HepG2ILF3
chr115754625557546279+intron-Distal5.3657710.04692HepG2HNRNPM
chr115754111957541167+intron-Distal5.9772417.54081HepG2HNRNPC
chr115757389157573919+intron-Distal,intron-Proximal4.368883.74583HepG2PTBP1
chr115756602357566076+intron-Distal3.346055.29774K562EXOSC5
chr115753958557539644+intron-Distal3.864213.64484HepG2HNRNPC
chr115754621657546285+intron-Distal4.5439114.87928K562EXOSC5
chr115757140557571449+intron-Distal4.044944.48652HepG2PTBP1
chr115754700057547003+intron-Distal3.362977.27933HepG2HNRNPM
chr115754615157546189+intron-Distal5.7083814.50969K562HNRNPM
chr115754630357546344+intron-Distal3.7823310.50062HepG2HNRNPM
chr115754620157546234+intron-Distal3.3748810.97318HepG2SUGP2
chr115753531957535329+intron-Distal4.646517.26174HepG2HNRNPC
chr115752989257529963+intron-Distal3.346238.72214K562RBFOX2
chr115754649757546528+intron-Distal4.0214110.69077HepG2HNRNPM
chr115756841157568461+intron-Distal4.6589010.04913K562HNRNPM
chr115755924557559316+intron-Distal3.621315.32169K562EFTUD2
chr115756655957566592+intron-Distal3.738365.12003HepG2HNRNPM
chr115754628557546329+intron-Distal4.288737.31365K562EXOSC5
chr115754027357540323+intron-Distal3.8120614.54023K562PTBP1
chr115756824157568288+intron-Distal4.865776.79824HepG2HNRNPM
chr115754609157546138+intron-Distal3.377427.91478K562EXOSC5
chr115754619557546246+intron-Distal4.2154216.11499K562HNRNPM
chr115753305857533112+intron-Distal3.860484.15830HepG2ILF3
chr115755974357559811+intron-Distal3.301124.23271HepG2HNRNPM
chr115753532957535373+intron-Distal4.261809.15277HepG2HNRNPC
chr115756614957566238+intron-Distal3.470743.44195K562TARDBP
chr115753360457533655+intron-Distal4.328264.66738K562KHDRBS1
chr115754401457544122+intron-Distal3.481713.71597K562MATR3
chr115754535757545411+intron-Distal3.110487.87801HepG2SUGP2
chr115757771357577790+intron-Proximal5.077076.44303K562AQR
chr115757578557575858+intron-Proximal4.656785.50278HepG2TIAL1
chr115757694357577005+intron-Proximal4.091953.12843K562PRPF8
chr115757445557574504+intron-Proximal3.831154.89208K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CTNND1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CTNND1 is not available on ENCORE database.

  • 133 RBPs can affect the levels of CTNND1.  








The Knockdown/knockout RNA-Seq assay for CTNND1 is not available on ENCORE database.





133 RBPs can affect the gene expression of CTNND1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CTNND1ENSG00000198561.84072.883506591.71610-0.694606.452403.92810HepG2AARS
CTNND1ENSG00000198561.87808.754009772.01380-0.323602.536501.63340HepG2ABCF1
CTNND1ENSG00000198561.84749.245506725.33040-0.501904.696403.47680HepG2BCCIP
CTNND1ENSG00000198561.85887.432707024.85870-0.254802.216301.67490HepG2BOP1
CTNND1ENSG00000198561.87641.699408862.33460-0.213802.256901.55530HepG2CALR
CTNND1ENSG00000198561.85741.774207565.82710-0.398002.069701.41310HepG2CNOT7
CTNND1ENSG00000198561.86032.233707723.40090-0.356506.580305.01880HepG2YBX3
CTNND1ENSG00000198561.83189.148504154.12150-0.381403.875402.62340HepG2CSTF2
CTNND1ENSG00000198561.87533.0917010444.24050-0.4714019.9950018.34350HepG2DAZAP1
CTNND1ENSG00000198561.85958.893307734.16630-0.376207.136605.38960HepG2DDX1
CTNND1ENSG00000198561.85994.803107409.23470-0.305603.151302.43120HepG2DDX21
CTNND1ENSG00000198561.84767.683706186.96570-0.375902.669301.40250HepG2DDX27
CTNND1ENSG00000198561.84676.930308105.53440-0.7933012.4645011.22580HepG2DDX3X
CTNND1ENSG00000198561.86166.526308294.60770-0.427704.803603.49420HepG2DDX5
CTNND1ENSG00000198561.85968.752407314.56090-0.293302.873401.87610HepG2DHX30
CTNND1ENSG00000198561.85529.142507285.09790-0.397909.891408.77200HepG2DKC1
CTNND1ENSG00000198561.85743.639607583.78560-0.401008.168107.01240HepG2DNAJC21
CTNND1ENSG00000198561.86238.999407516.84070-0.268806.675005.72350HepG2DNAJC2
CTNND1ENSG00000198561.88775.495207134.593900.298502.572001.68050HepG2EEF2
CTNND1ENSG00000198561.85836.558307396.63240-0.341802.429101.82850HepG2EIF4A3
CTNND1ENSG00000198561.88088.1666010303.91660-0.349308.206906.90590HepG2EIF4G1
CTNND1ENSG00000198561.87176.368009870.48690-0.459905.734504.58180HepG2EIF4G2
CTNND1ENSG00000198561.89371.6514012610.33940-0.4282012.3540011.23200HepG2ETF1
CTNND1ENSG00000198561.812523.576909867.338700.343802.674501.91680HepG2FIP1L1
CTNND1ENSG00000198561.83359.614606460.32320-0.943305.238003.84520HepG2FTO
CTNND1ENSG00000198561.89460.976807464.316400.341902.910402.19970HepG2FXR1
CTNND1ENSG00000198561.86146.104207269.69860-0.242203.951702.79880HepG2HDGF
CTNND1ENSG00000198561.84599.306206397.88340-0.476203.309101.80600HepG2HNRNPA0
CTNND1ENSG00000198561.86126.014707656.44060-0.321703.598702.87460HepG2HNRNPA1
CTNND1ENSG00000198561.85935.564908516.38210-0.520908.148107.00660HepG2HNRNPC
CTNND1ENSG00000198561.87830.652408892.48940-0.183502.636101.93560HepG2HNRNPF
CTNND1ENSG00000198561.88549.928109513.89230-0.154102.753502.08130HepG2HNRNPL
CTNND1ENSG00000198561.85878.442406976.49980-0.247101.852701.32720HepG2HNRNPLL
CTNND1ENSG00000198561.84606.706708460.07630-0.8769046.1512043.92980HepG2HNRNPU
CTNND1ENSG00000198561.87465.568308756.54290-0.230102.536701.84300HepG2IGF2BP1
CTNND1ENSG00000198561.87284.325008641.68660-0.246506.121105.07320HepG2ILF2
CTNND1ENSG00000198561.85230.934507375.87880-0.495703.393201.90910HepG2ILF3
CTNND1ENSG00000198561.85092.526107209.37760-0.501504.182002.66560HepG2KHDRBS1
CTNND1ENSG00000198561.85890.736506960.63100-0.240805.420704.00710HepG2KIF1C
CTNND1ENSG00000198561.86187.485107985.75910-0.368104.853803.80290HepG2MSI2
CTNND1ENSG00000198561.86283.782307545.71080-0.264003.746202.90060HepG2PPIL4
CTNND1ENSG00000198561.84730.881808003.25660-0.7585031.5865029.53930HepG2PRPF4
CTNND1ENSG00000198561.88940.100607287.296800.294805.849505.11350HepG2PTBP1
CTNND1ENSG00000198561.87799.977409886.18560-0.341904.093703.38420HepG2PUF60
CTNND1ENSG00000198561.88770.3670010486.96110-0.257903.144102.42890HepG2PUM2
CTNND1ENSG00000198561.88670.252607755.972300.160702.417801.83170HepG2PUS1
CTNND1ENSG00000198561.88933.5676010539.93670-0.238603.389702.83270HepG2RBM22
CTNND1ENSG00000198561.85332.819006937.66370-0.379603.314902.15230HepG2RCC2
CTNND1ENSG00000198561.85814.370808109.88660-0.4801013.8806012.84150HepG2NELFE
CTNND1ENSG00000198561.88670.006007553.574700.198803.222802.56390HepG2RECQL
CTNND1ENSG00000198561.87100.739009579.69890-0.432005.886504.94440HepG2RPLP0
CTNND1ENSG00000198561.85770.538108318.57340-0.527603.570002.49830HepG2RPS10
CTNND1ENSG00000198561.86407.162007879.52060-0.298402.453501.69610HepG2RPS2
CTNND1ENSG00000198561.85978.625507597.44000-0.345702.046301.35840HepG2RPS3A
CTNND1ENSG00000198561.83912.790805045.76190-0.366902.815802.02330HepG2RRP9
CTNND1ENSG00000198561.85424.081507534.06770-0.4741017.0530015.65000HepG2SAFB2
CTNND1ENSG00000198561.84840.190307154.30720-0.563705.113303.32560HepG2SART3
CTNND1ENSG00000198561.88771.424807586.638800.209303.500302.84580HepG2SF3B4
CTNND1ENSG00000198561.87985.665808785.98860-0.137802.405101.79940HepG2SMN1
CTNND1ENSG00000198561.88840.8019011904.51740-0.4293015.0415014.12090HepG2SRFBP1
CTNND1ENSG00000198561.811513.889107918.962600.5399022.4073021.33920HepG2SRSF1
CTNND1ENSG00000198561.88383.586109761.18200-0.219503.639102.93920HepG2SRSF5
CTNND1ENSG00000198561.87182.928708736.64840-0.282505.679304.73950HepG2SRSF7
CTNND1ENSG00000198561.85658.370106442.63070-0.187302.715802.16800HepG2SRSF9
CTNND1ENSG00000198561.86684.7764010336.02120-0.6287026.6962025.47040HepG2SSB
CTNND1ENSG00000198561.810053.5220011101.14130-0.143002.314701.73600HepG2SUCLG1
CTNND1ENSG00000198561.86431.097309726.64650-0.596905.390203.53880HepG2SUGP2
CTNND1ENSG00000198561.84079.739706662.71160-0.7076015.4609013.37620HepG2SUPT6H
CTNND1ENSG00000198561.85374.194906582.52840-0.292602.061501.46490HepG2SUPV3L1
CTNND1ENSG00000198561.84851.909906800.37210-0.487106.433005.38900HepG2TARDBP
CTNND1ENSG00000198561.83774.337408220.51670-1.1230044.8080043.24370HepG2TIAL1
CTNND1ENSG00000198561.85786.443408294.03250-0.5194016.8343015.60100HepG2TRIM56
CTNND1ENSG00000198561.88153.717509658.40350-0.244302.521401.69050HepG2TUFM
CTNND1ENSG00000198561.84932.083408440.74190-0.7752014.3631012.89450HepG2U2AF1
CTNND1ENSG00000198561.82784.915803888.47790-0.481604.960203.93740HepG2UCHL5
CTNND1ENSG00000198561.84849.192107673.59850-0.6622028.8685027.10430HepG2UPF1
CTNND1ENSG00000198561.84087.657806027.48730-0.560304.295203.03000HepG2UPF2
CTNND1ENSG00000198561.89213.549507887.275400.224103.341202.20380HepG2UTP18
CTNND1ENSG00000198561.86177.037607408.53520-0.262305.117104.34480HepG2UTP3
CTNND1ENSG00000198561.84745.751006805.05700-0.520003.813902.52050HepG2XPO5
CTNND1ENSG00000198561.84430.782906479.77840-0.548406.764205.64590HepG2XRN2
CTNND1ENSG00000198561.82060.012902851.98740-0.469305.902704.11060K562AARS
CTNND1ENSG00000198561.89137.536805124.584800.8343031.8512030.01090K562AGGF1
CTNND1ENSG00000198561.87108.238105631.522900.335902.599401.65360K562AKAP8
CTNND1ENSG00000198561.87216.824605332.456000.436506.038305.04910K562AKAP8L
CTNND1ENSG00000198561.84132.961005330.99280-0.367204.440402.81220K562APOBEC3C
CTNND1ENSG00000198561.87600.550904519.245000.7499014.3448013.15480K562AQR
CTNND1ENSG00000198561.84127.974703060.083500.431807.010004.78390K562BCCIP
CTNND1ENSG00000198561.83495.052802956.662800.241202.418701.52280K562BCLAF1
CTNND1ENSG00000198561.84714.183603086.133800.611108.371906.81220K562BOP1
CTNND1ENSG00000198561.84855.790003868.107700.328003.963302.13950K562CEBPZ
CTNND1ENSG00000198561.86738.289205115.976300.397303.273301.68310K562CKAP4
CTNND1ENSG00000198561.810005.791604329.433201.2085013.4304011.13400K562CNOT7
CTNND1ENSG00000198561.85286.767703281.190800.6881015.0789013.21150K562CPSF6
CTNND1ENSG00000198561.812549.822007429.401200.7562021.8344019.43180K562CELF1
CTNND1ENSG00000198561.85423.317904446.049600.286604.198302.68580K562DDX21
CTNND1ENSG00000198561.82304.288702955.17880-0.358902.559801.56800K562EIF3D
CTNND1ENSG00000198561.84516.729403616.533600.320602.964002.08470K562FIP1L1
CTNND1ENSG00000198561.84569.390503339.027200.452505.188404.01140K562FMR1
CTNND1ENSG00000198561.83740.244402830.341000.402103.620202.56200K562FTO
CTNND1ENSG00000198561.83380.228002557.598700.402206.090903.99120K562FUS
CTNND1ENSG00000198561.82864.765603838.64790-0.422202.984402.35960K562FXR1
CTNND1ENSG00000198561.84885.632503862.596300.338903.729502.03350K562G3BP1
CTNND1ENSG00000198561.84816.354003375.538400.5127010.865308.74690K562GLRX3
CTNND1ENSG00000198561.84577.097803132.525900.547007.049405.78100K562GPKOW
CTNND1ENSG00000198561.84967.345103828.329000.375704.854103.44690K562HNRNPA1
CTNND1ENSG00000198561.86909.278804036.712000.775304.030002.47080K562HNRNPA2B1
CTNND1ENSG00000198561.85334.339004286.300600.315503.072001.95250K562HNRNPL
CTNND1ENSG00000198561.84092.907404903.28330-0.260602.147401.44350K562HSPD1
CTNND1ENSG00000198561.85978.550903953.599200.596503.474301.85720K562ILF2
CTNND1ENSG00000198561.82550.276801886.877400.434604.010602.21870K562KHDRBS1
CTNND1ENSG00000198561.87497.824905658.741900.405905.860904.55670K562KIF1C
CTNND1ENSG00000198561.84955.512802675.320900.8892011.122209.12770K562KRR1
CTNND1ENSG00000198561.84123.711203165.013000.381603.611001.88330K562LIN28B
CTNND1ENSG00000198561.83107.947604246.00750-0.450106.014004.75680K562MAGOH
CTNND1ENSG00000198561.83605.041204237.38770-0.233202.097001.30260K562MATR3
CTNND1ENSG00000198561.85457.816703057.780900.8357019.3952017.01110K562METAP2
CTNND1ENSG00000198561.810465.177206439.753000.7004012.6694010.41480K562MSI2
CTNND1ENSG00000198561.85591.704903548.915300.6558025.0687023.00960K562MTPAP
CTNND1ENSG00000198561.86279.712604443.395000.498904.236903.07600K562NAA15
CTNND1ENSG00000198561.86507.797903943.293300.7227050.0083047.53980K562NSUN2
CTNND1ENSG00000198561.86171.903304159.331700.569303.717702.26360K562PABPC1
CTNND1ENSG00000198561.85315.346203529.944600.590402.540501.60240K562PABPN1
CTNND1ENSG00000198561.87239.936604799.840400.592907.207505.86470K562PCBP3
CTNND1ENSG00000198561.85263.882003681.582700.515709.161307.73770K562POLR2G
CTNND1ENSG00000198561.82677.958504125.26510-0.6234011.8097010.49350K562PTBP1
CTNND1ENSG00000198561.88544.625705287.667200.6923012.7426011.62420K562PUS1
CTNND1ENSG00000198561.87843.920705152.587000.6062016.7310015.25710K562RBM15
CTNND1ENSG00000198561.83195.187503955.61550-0.308002.763401.92410K562RBM22
CTNND1ENSG00000198561.84888.142303564.757700.455406.404804.29690K562RBM25
CTNND1ENSG00000198561.82335.184004162.65750-0.8340014.3127011.86020K562NELFE
CTNND1ENSG00000198561.83759.942105402.05710-0.522806.286004.70070K562RPS3
CTNND1ENSG00000198561.86018.665703943.901100.609704.061702.12390K562SBDS
CTNND1ENSG00000198561.85567.106603227.627800.786403.348301.99100K562SF1
CTNND1ENSG00000198561.86046.442903890.831300.6359019.0360017.05230K562SF3A3
CTNND1ENSG00000198561.84120.202502979.885900.467404.295003.06480K562SF3B1
CTNND1ENSG00000198561.86205.586003933.967200.657502.692401.41460K562SFPQ
CTNND1ENSG00000198561.83042.155002058.318700.563507.218105.19070K562SLBP
CTNND1ENSG00000198561.83596.009502963.664300.278903.363801.31480K562SLTM
CTNND1ENSG00000198561.86243.977703707.661000.751903.464702.03240K562SNRNP200
CTNND1ENSG00000198561.86779.536303986.223200.7661042.9690040.15850K562SRPK2
CTNND1ENSG00000198561.84301.612305215.20830-0.277802.891201.80850K562SRSF4
CTNND1ENSG00000198561.85299.780403967.922700.417408.103006.10490K562SRSF7
CTNND1ENSG00000198561.83492.055402984.071400.226702.904101.58860K562SSB
CTNND1ENSG00000198561.86256.170404340.078700.527506.000004.08120K562STAU1
CTNND1ENSG00000198561.86002.043903859.981500.636803.081601.34770K562STIP1
CTNND1ENSG00000198561.88276.223405751.431200.5250010.834408.19390K562SUCLG1
CTNND1ENSG00000198561.83582.509002600.331000.462204.144802.88080K562SUPV3L1
CTNND1ENSG00000198561.82836.806303692.80430-0.380405.120503.99570K562SYNCRIP
CTNND1ENSG00000198561.83754.703102858.957600.393104.415803.15880K562TRIM56
CTNND1ENSG00000198561.85477.773204230.731200.372603.609501.97680K562TRIP6
CTNND1ENSG00000198561.85161.616003642.943700.502604.787103.27120K562U2AF1
CTNND1ENSG00000198561.84410.131003762.882700.228902.218701.49970K562U2AF2
CTNND1ENSG00000198561.84321.325402752.378300.650708.958507.05570K562UCHL5
CTNND1ENSG00000198561.86545.122904181.147300.6464025.2493023.34540K562UPF1
CTNND1ENSG00000198561.88726.681605361.817100.702604.236102.51560K562UTP18
CTNND1ENSG00000198561.85735.416704161.346500.462704.357902.83980K562UTP3
CTNND1ENSG00000198561.86583.514403577.692400.8797023.1297020.73710K562WDR3
CTNND1ENSG00000198561.84401.626803720.269900.242504.199003.17100K562WDR43
CTNND1ENSG00000198561.88009.253005356.277600.580307.735805.62470K562WRN
CTNND1ENSG00000198561.88893.795605090.191600.8050017.8529015.52790K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CTNND1 is not available on ENCORE database.





56 RBPs can affect the splicing of CTNND1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECTNND1ENSG00000198561.8chr11+575565085755662757529268575295185755885657559145-0.452000.000000.00141excludedK562TAF15
SECTNND1ENSG00000198561.8chr11+5756148157561553575292685752951857563048575632010.111000.001340.09301includedHepG2G3BP1
SECTNND1ENSG00000198561.8chr11+5755650857556627575292685752951857558856575591450.269000.000390.00968includedK562SRSF1
SECTNND1ENSG00000198561.8chr11+575565085755662757529268575295185755885657559145-0.355000.004720.07078excludedK562SF3B4
SECTNND1ENSG00000198561.8chr11+575817825758184557578870575789585758286557582972-0.055000.006140.08682excludedK562SF3B4
SECTNND1ENSG00000198561.8chr11+5758338657583473575828655758297257583768575866500.080000.000010.00104includedK562PRPF8
SECTNND1ENSG00000198561.8chr11+5755896557559145575292685752951857561481575615530.194000.000740.02965includedK562PRPF8
SECTNND1ENSG00000198561.8chr11+5755650857556627575292685752951857561481575615530.289000.000000.00000includedHepG2RBM22
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.197000.000030.02118includedK562TIA1
SECTNND1ENSG00000198561.8chr11+5755896557559145575292685752951857561481575615530.151000.000140.02774includedK562MATR3
SECTNND1ENSG00000198561.8chr11+5756063157560716575588565755914557561481575615530.060000.000070.02422includedK562WDR3
SECTNND1ENSG00000198561.8chr11+5755885657559145575292685752951857561481575615530.181000.000000.00001includedHepG2U2AF1
SECTNND1ENSG00000198561.8chr11+575565085755662757529268575295185755885657559145-0.305000.000000.00000excludedHepG2U2AF1
SECTNND1ENSG00000198561.8chr11+575614815756155357558856575591455756304857563201-0.087000.002840.04820excludedHepG2U2AF1
SECTNND1ENSG00000198561.8chr11+575614815756155357529268575295185756304857563201-0.187000.000000.00001excludedK562AKAP8L
SECTNND1ENSG00000198561.8chr11+5756148157561553575292685752951857563048575632010.098000.000140.02280includedK562FMR1
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.236000.000000.00003includedHepG2HNRNPK
SECTNND1ENSG00000198561.8chr11+575588565755914557529289575295185756148157561553-0.089000.000120.01773excludedHepG2DDX59
SECTNND1ENSG00000198561.8chr11+5755650857556627575292685752951857558856575591450.320000.000000.00023includedHepG2QKI
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.498000.000000.00000includedHepG2U2AF2
SECTNND1ENSG00000198561.8chr11+575614815756155357558856575591455756304857563201-0.072000.002660.03183excludedHepG2U2AF2
SECTNND1ENSG00000198561.8chr11+5755650857556627575292685752951857558856575591450.238000.000000.00025includedHepG2AKAP1
SECTNND1ENSG00000198561.8chr11+5758338657583473575828655758297257583768575866500.062000.000000.00000includedK562AQR
SECTNND1ENSG00000198561.8chr11+5756148157561553575292685752951857563048575632010.183000.000590.02572includedK562FXR1
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.111000.000250.04497includedK562DROSHA
SECTNND1ENSG00000198561.8chr11+575565085755662757529268575295185755885657559145-0.240000.000010.00375excludedHepG2BCLAF1
SECTNND1ENSG00000198561.8chr11+575614815756155357529268575295185756304857563201-0.320000.000000.00000excludedK562PUS1
SECTNND1ENSG00000198561.8chr11+575588565755914557529289575295185756148157561553-0.154000.000000.00004excludedK562NSUN2
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.482000.000000.00000includedHepG2SFPQ
SECTNND1ENSG00000198561.8chr11+5755650857556627575292685752951857558856575591450.454000.000000.00000includedHepG2PTBP1
SECTNND1ENSG00000198561.8chr11+5757393257573950575733535757350757574386575744550.131000.000000.00000includedHepG2PTBP1
SECTNND1ENSG00000198561.8chr11+575588565755914557529289575295185756148157561553-0.096000.000570.08911excludedK562GPKOW
SECTNND1ENSG00000198561.8chr11+575588565755914557529289575295185756148157561553-0.104000.000040.02507excludedK562BUD13
SECTNND1ENSG00000198561.8chr11+5756148157561553575588565755914557563048575632010.067000.000010.00146includedHepG2FTO
SECTNND1ENSG00000198561.8chr11+575565085755662757529268575295185755885657559145-0.273000.000010.00222excludedHepG2FTO
SECTNND1ENSG00000198561.8chr11+575565085755662757529268575295185755885657559145-0.241000.000880.09468excludedK562LARP4
SECTNND1ENSG00000198561.8chr11+5755650857556627575292685752951857558856575591450.253000.000050.01746includedK562APOBEC3C
SECTNND1ENSG00000198561.8chr11+5755896557559145575292685752951857561481575615530.174000.000900.04735includedK562EFTUD2
SECTNND1ENSG00000198561.8chr11+5755650857556627575292685752951857558856575591450.286000.000000.00000includedHepG2MATR3
SECTNND1ENSG00000198561.8chr11+575614815756155357558856575591455756304857563201-0.146000.000050.00366excludedHepG2MATR3
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.146000.001330.09258includedHepG2DDX6
SECTNND1ENSG00000198561.8chr11+575588565755914557529289575295185756148157561553-0.126000.000000.00046excludedK562HNRNPL
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.121000.000000.00012includedHepG2HNRNPUL1
SECTNND1ENSG00000198561.8chr11+5755650857556627575292685752951857558856575591450.382000.000000.00000includedHepG2SRSF1
SECTNND1ENSG00000198561.8chr11+575614815756155357558856575591455756304857563201-0.096000.000010.00059excludedHepG2SF3A3
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.113000.000100.03260includedK562FXR2
SECTNND1ENSG00000198561.8chr11+5758178257581845575788705757895857582865575829720.083000.000020.01107includedK562FXR2
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.250000.000000.00004includedHepG2IGF2BP3
SECTNND1ENSG00000198561.8chr11+575565085755662757529268575295185755885657559145-0.202000.000940.06265excludedK562HNRNPUL1
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.150000.000910.06315includedHepG2TIAL1
SECTNND1ENSG00000198561.8chr11+575565085755662757529268575295185755885657559145-0.204000.000170.02329excludedHepG2SUPV3L1
SECTNND1ENSG00000198561.8chr11+575588565755914557529289575295185756148157561553-0.129000.000020.00554excludedK562SRSF7
SECTNND1ENSG00000198561.8chr11+5755885657559145575292685752959157561481575615530.240000.001360.05866includedHepG2SF3B4
SECTNND1ENSG00000198561.8chr11+5756063157560716575588565755914557561481575615530.064000.000380.01644includedK562UTP18
SECTNND1ENSG00000198561.8chr11+575614815756155357529268575295185756304857563201-0.161000.000000.00038excludedK562UTP18
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.266000.000000.00000includedK562U2AF2
SECTNND1ENSG00000198561.8chr11+575565085755662757529268575295185755885657559145-0.336000.000120.00326excludedK562U2AF2
SECTNND1ENSG00000198561.8chr11+5756063157560716575588565755914557561481575615530.097000.000210.00798includedK562RBM15
SECTNND1ENSG00000198561.8chr11+575614815756155357529268575295185756304857563201-0.189000.000000.00001excludedK562RBM15
SECTNND1ENSG00000198561.8chr11+575817825758184557578870575789585758286557582972-0.054000.000060.00278excludedK562RBM15
SECTNND1ENSG00000198561.8chr11+575614815756155357529268575295185756304857563201-0.231000.000000.00002excludedK562AGGF1
SECTNND1ENSG00000198561.8chr11+575817825758184557578870575789585758286557582972-0.062000.000010.00041excludedK562AGGF1
SECTNND1ENSG00000198561.8chr11+5756148157561553575292685752951857563048575632010.094000.000530.05590includedK562CPSF6
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.166000.000090.02923includedHepG2EIF3D
SECTNND1ENSG00000198561.8chr11+575565085755662757529268575295185755885657559145-0.262000.000020.00929excludedHepG2EIF3D
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.188000.000170.08000includedK562AARS
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.160000.000010.01037includedHepG2SMNDC1
SECTNND1ENSG00000198561.8chr11+575565085755662757529268575295185755885657559145-0.223000.000310.04951excludedK562ZC3H8
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.152000.000400.02113includedHepG2HNRNPU
SECTNND1ENSG00000198561.8chr11+575614815756155357558856575591455756304857563201-0.091000.000260.05753excludedHepG2XRCC6
SECTNND1ENSG00000198561.8chr11+5755650857556627575292685752951857558856575591450.185000.000010.00070includedHepG2HNRNPC
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.166000.000010.01213includedHepG2SLTM
SECTNND1ENSG00000198561.8chr11+5755885657559145575292895752951857561481575615530.292000.000130.03862includedK562SERBP1
SECTNND1ENSG00000198561.8chr11+5755650857556627575292685752951857558856575591450.339000.000000.00001includedK562PTBP1
SECTNND1ENSG00000198561.8chr11+5757393257573950575733535757350757574386575744550.070000.000010.00059includedK562PTBP1
SECTNND1ENSG00000198561.8chr11+575565085755662757529268575295185756148157561553-0.054000.000500.07828excludedK562NPM1
SECTNND1ENSG00000198561.8chr11+5755650857556627575292685752951857558856575591450.246000.003270.04996includedK562HNRNPC
SECTNND1ENSG00000198561.8chr11+575588565755914557529289575295185756148157561553-0.152000.000000.00002excludedK562HNRNPC
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755885657559145-0.293000.000170.04387shorterK562HNRNPUL1
A5SSCTNND1ENSG00000198561.8chr11+5752926857529591575292685752951857563048575632130.280000.000350.05986longerK562TARDBP
A5SSCTNND1ENSG00000198561.8chr11+5752926857529591575292685752951857556508575566270.488000.000000.00000longerK562PUS1
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185756304857563213-0.183000.000140.00765shorterK562PUS1
A5SSCTNND1ENSG00000198561.8chr11+5755896557559173575589655755914557561481575615530.154000.002910.04620longerK562AQR
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755650857556627-0.225000.000010.00122shorterHepG2TAF15
A5SSCTNND1ENSG00000198561.8chr11+5752926857529591575292685752951857556508575566270.166000.000050.02223longerHepG2DDX59
A5SSCTNND1ENSG00000198561.8chr11+5752926857529591575292685752951857556508575566270.245000.000160.01886longerK562AGGF1
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755650857556627-0.279000.000000.00000shorterHepG2U2AF2
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755650857556627-0.073000.000540.04907shorterHepG2RBM22
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755650857556627-0.184000.000060.00681shorterHepG2HNRNPK
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755650857556627-0.369000.000000.00000shorterK562APOBEC3C
A5SSCTNND1ENSG00000198561.8chr11+5752926857529591575292685752951857561481575615530.165000.000000.00010longerHepG2SFPQ
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755650857556627-0.242000.000000.00165shorterHepG2SFPQ
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185756148157561553-0.164000.000000.00005shorterHepG2SRSF1
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185756148157561553-0.200000.000000.00000shorterK562HNRNPC
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755650857556627-0.269000.000000.00119shorterK562PTBP1
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755650857556627-0.161000.000230.03835shorterHepG2AKAP1
A5SSCTNND1ENSG00000198561.8chr11+5752926857529591575292685752951857563048575632130.239000.000070.03000longerK562FXR2
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755885657559145-0.291000.000000.00480shorterK562NPM1
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755885657559145-0.435000.000000.00010shorterK562U2AF2
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185756148157561553-0.076000.000070.02235shorterHepG2HNRNPUL1
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755650857556627-0.228000.000000.00001shorterHepG2MATR3
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755650857556627-0.216000.000050.01942shorterK562DROSHA
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755650857556627-0.212000.000000.00058shorterHepG2G3BP1
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755650857556627-0.296000.000000.00000shorterHepG2PTBP1
A5SSCTNND1ENSG00000198561.8chr11+5752926857529591575292685752951857561481575615530.128000.000050.01075longerHepG2FTO
A5SSCTNND1ENSG00000198561.8chr11+575292685752959157529268575295185755885657559145-0.188000.000160.01814shorterHepG2U2AF1
MXECTNND1ENSG00000198561.8chr11+5755650857556627575589655755914557529268575295185756148157561553-0.164000.000020.000742includedHepG2U2AF1
MXECTNND1ENSG00000198561.8chr11+5755650857556627575588565755914557529268575295185756148157561553-0.174000.000000.000002includedHepG2U2AF1
MXECTNND1ENSG00000198561.8chr11+5757887057578958575817825758184557577580575776955758286557582972-0.102000.001620.032072includedHepG2FTO
MXECTNND1ENSG00000198561.8chr11+57556508575566275756148157561553575292685752951857563048575632010.387000.000000.000001includedK562PTBP1
MXECTNND1ENSG00000198561.8chr11+57556508575566275755896557559145575292685752951857561481575615530.214000.000040.001701includedHepG2SRSF1
MXECTNND1ENSG00000198561.8chr11+57556508575566275755885657559145575292685752951857561481575615530.284000.000000.000001includedHepG2SRSF1
MXECTNND1ENSG00000198561.8chr11+5755885657559145575606315756071657529268575295915756148157561553-0.084000.004400.063342includedK562PUS1
MXECTNND1ENSG00000198561.8chr11+5755885657559145575606315756071657529268575295185756148157561553-0.092000.000190.016992includedK562UTP18
MXECTNND1ENSG00000198561.8chr11+5755896557559145575606315756071657529268575295185756148157561553-0.126000.000080.009172includedK562UTP18
MXECTNND1ENSG00000198561.8chr11+5755650857556627575589655755914557529268575295185756148157561553-0.128000.001870.024342includedHepG2SFPQ
MXECTNND1ENSG00000198561.8chr11+5757887057578958575817825758184557577580575776955758286557582972-0.097000.001540.011702includedHepG2U2AF2
MXECTNND1ENSG00000198561.8chr11+57578870575789585758178257581845575775805757769557582865575829720.111000.000530.034081includedHepG2DROSHA
MXECTNND1ENSG00000198561.8chr11+5757758057577695575788705757895857576745575769385758178257581845-0.092000.002270.054132includedK562SBDS
MXECTNND1ENSG00000198561.8chr11+57556508575566275756148157561553575292685752951857563048575632010.088000.000990.086211includedHepG2XRCC6
MXECTNND1ENSG00000198561.8chr11+5755650857556627575588565755914557529268575295185756148157561553-0.176000.000170.028172includedK562NPM1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CTNND1 is not avaliable on ENCORE database.