COX7B

General Information

Gene Name       : COX7B
Gene ID             : ENSG00000131174.5
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: COX7B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878COX7BENSG00000131174.5529.49494.99512.24ENCSR000AEF
HepG2COX7BENSG00000131174.5471.34415.69443.51ENCSR985KAT
K562COX7BENSG00000131174.5809.22721.07765.14ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for COX7B is not avaliable on ENCORE database.



Proteins bound to RNA
  • COX7B RNA is bound by 20 proteins.  







eCLIP assay for COX7B is not avaliable on ENCORE database.





20 proteins are bound to COX7B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX7716068877160775+3'-UTR,CDS3.3725311.15181K562LARP4
chrX7716067677160828+3'-UTR,CDS,intron-Proximal3.2423410.90302K562DDX6
chrX7716069277160780+3'-UTR,CDS3.6730539.77078K562PABPC4
chrX7716196377162072+3'-UTR3.904913.66668K562KHSRP
chrX7716070477160777+3'-UTR,CDS5.0244124.38653K562RPS3
chrX7716071177160819+3'-UTR,CDS4.719164.53184K562IGF2BP1
chrX7716078077160838+3'-UTR3.292547.14274K562PABPC4
chrX7716077777160815+3'-UTR4.025724.96842K562RPS3
chrX7716070677160824+3'-UTR,CDS3.3738510.67753K562APOBEC3C
chrX7716075577160844+3'-UTR6.3543319.59199HepG2LARP4
chrX7715504477155090+5'-UTR,CDS3.967836.66061K562APOBEC3C
chrX7715504977155092+5'-UTR,CDS,intron-Proximal4.016177.42445K562RPS3
chrX7715496877155015+5'-UTR3.5595334.01458K562DDX3X
chrX7715496977155033+5'-UTR4.168607.42445K562RPS3
chrX7715496677155032+5'-UTR3.6496010.39995K562PABPC4
chrX7715496677155052+5'-UTR,CDS4.313114.87311K562EIF3G
chrX7715496877155044+5'-UTR3.356638.82215K562APOBEC3C
chrX7716067977160710+CDS,intron-Proximal3.307966.47352K562SND1
chrX7715817877158263+CDS5.241555.99789HepG2RPS3
chrX7716067777160704+CDS,intron-Proximal3.601723.61797K562RPS3
chrX7716067977160727+CDS,intron-Proximal3.558994.02879K562IGF2BP2
chrX7715818377158262+CDS4.7057928.58978K562RPS3
chrX7715824177158265+CDS,intron-Proximal3.192627.47740K562APOBEC3C
chrX7715820177158265+CDS,intron-Proximal3.2830911.40137K562SND1
chrX7715814677158272+CDS,intron-Proximal3.242076.31407K562PUM1
chrX7716070377160755+CDS5.1179016.28760HepG2LARP4
chrX7716067877160703+CDS,intron-Proximal4.249428.59403HepG2LARP4
chrX7715814177158223+CDS3.069688.67434K562LIN28B
chrX7716072777160752+CDS5.031888.57234K562IGF2BP2
chrX7715823277158267+CDS,intron-Proximal4.498964.14433K562ZNF800
chrX7715819377158265+CDS,intron-Proximal3.744566.89080HepG2LARP4
chrX7716067977160703+CDS,intron-Proximal3.306866.97623K562APOBEC3C
chrX7716066977160748+CDS,intron-Proximal5.1018733.12386K562SF3B4
chrX7716067977160692+CDS,intron-Proximal3.561738.77854K562PABPC4
chrX7716067977160711+CDS,intron-Proximal4.417413.81856K562IGF2BP1
chrX7715508577155200+CDS,intron-Distal,intron-Proximal3.6174713.40055K562AQR
chrX7715824277158265+CDS,intron-Proximal3.684288.40205K562PABPC4
chrX7715703277157137+intron-Distal3.832106.07515K562QKI
chrX7715854577158571+intron-Distal3.813853.62499K562HNRNPC
chrX7715791877157955+intron-Distal3.725885.96041K562KHSRP
chrX7715857177158580+intron-Distal3.736023.21749K562HNRNPC
chrX7716063377160669+intron-Proximal4.4994822.99443K562SF3B4
chrX7716065877160674+intron-Proximal3.050654.95397K562SMNDC1
chrX7715812277158136+intron-Proximal3.394396.72905K562BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for COX7B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for COX7B is not available on ENCORE database.

  • 101 RBPs can affect the levels of COX7B.  








The Knockdown/knockout RNA-Seq assay for COX7B is not available on ENCORE database.





101 RBPs can affect the gene expression of COX7B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
COX7BENSG00000131174.4695.30830961.23530-0.467202.200501.30960HepG2ADAR
COX7BENSG00000131174.41777.696401382.145700.363002.678001.90490HepG2ASCC1
COX7BENSG00000131174.41494.38360958.205800.641005.758804.38520HepG2BCCIP
COX7BENSG00000131174.41248.33950990.829300.333202.239101.54040HepG2CALR
COX7BENSG00000131174.41196.37750992.671000.269202.397901.77070HepG2CKAP4
COX7BENSG00000131174.4497.70490756.23010-0.603505.198704.28290HepG2CPSF6
COX7BENSG00000131174.4549.666801128.31990-1.0375017.2623015.74350HepG2DDX21
COX7BENSG00000131174.41251.17670942.104300.409202.645201.88640HepG2DDX55
COX7BENSG00000131174.4597.40760858.75640-0.523502.243601.36650HepG2DDX59
COX7BENSG00000131174.4730.57630950.07490-0.379002.167901.55700HepG2DKC1
COX7BENSG00000131174.4715.13290968.00960-0.436802.231501.59420HepG2DNAJC21
COX7BENSG00000131174.4697.397101065.81110-0.611907.516305.89240HepG2EIF3G
COX7BENSG00000131174.41076.559901460.33620-0.439903.071302.39860HepG2EIF4A3
COX7BENSG00000131174.41459.500301789.07560-0.293703.375502.46680HepG2EIF4G1
COX7BENSG00000131174.41138.206401782.93160-0.6475014.3081013.11210HepG2ETF1
COX7BENSG00000131174.4864.477701450.96890-0.747108.903107.29200HepG2G3BP2
COX7BENSG00000131174.4735.12470947.99820-0.366902.861701.86880HepG2HDGF
COX7BENSG00000131174.4467.28860816.41590-0.805006.949704.96340HepG2KHDRBS1
COX7BENSG00000131174.4992.458501397.39310-0.493703.224802.13090HepG2KHSRP
COX7BENSG00000131174.4906.744201473.86340-0.700807.560806.49110HepG2MAGOH
COX7BENSG00000131174.4657.40850937.19570-0.511604.984703.92200HepG2MSI2
COX7BENSG00000131174.41043.811701517.04500-0.539404.596803.79140HepG2NCBP2
COX7BENSG00000131174.41471.802401798.05120-0.288902.701501.94710HepG2NOL12
COX7BENSG00000131174.4899.479701351.06920-0.586905.442304.44020HepG2PABPC4
COX7BENSG00000131174.4937.048001427.18350-0.607006.362705.50130HepG2PCBP1
COX7BENSG00000131174.4685.11150963.10160-0.491302.693801.96520HepG2PPIL4
COX7BENSG00000131174.4601.963401452.30150-1.2706033.7277032.24930HepG2PTBP1
COX7BENSG00000131174.41283.700701716.45110-0.419102.115201.58420HepG2PUF60
COX7BENSG00000131174.41446.947401820.78150-0.331503.229102.50410HepG2PUM2
COX7BENSG00000131174.4411.129601011.50860-1.2988015.7668014.50670HepG2PUS1
COX7BENSG00000131174.4918.580501572.68880-0.7758014.6022013.32610HepG2QKI
COX7BENSG00000131174.4930.422801328.61570-0.514004.126303.10430HepG2RBM15
COX7BENSG00000131174.41168.598401427.38780-0.288602.096801.50430HepG2RBM25
COX7BENSG00000131174.4981.861201616.19820-0.7190015.2900014.21120HepG2NELFE
COX7BENSG00000131174.4756.810201505.40310-0.9921020.2852018.87750HepG2RECQL
COX7BENSG00000131174.4527.12970720.07960-0.450003.631402.93690HepG2RPS19
COX7BENSG00000131174.4854.177401045.03170-0.290902.000701.31210HepG2RPS2
COX7BENSG00000131174.4643.60150860.35880-0.418802.170501.46180HepG2RPS3A
COX7BENSG00000131174.41226.989201511.87380-0.301203.252002.61760HepG2SF3B4
COX7BENSG00000131174.41199.57490871.287500.461202.868601.84750HepG2SRSF3
COX7BENSG00000131174.41074.820001694.82100-0.6570014.0109012.75290HepG2SRSF5
COX7BENSG00000131174.4970.763801283.95220-0.403405.572504.83680HepG2SRSF9
COX7BENSG00000131174.41263.415401461.33910-0.210002.052101.59410HepG2SSB
COX7BENSG00000131174.4532.99770748.43480-0.489702.886801.76000HepG2STIP1
COX7BENSG00000131174.41479.801001927.41370-0.381306.581605.69430HepG2SUCLG1
COX7BENSG00000131174.41127.574501418.66910-0.331303.425502.81200HepG2TAF15
COX7BENSG00000131174.4893.40990628.630800.507003.212602.14410HepG2TFIP11
COX7BENSG00000131174.41077.506701303.37190-0.274602.038801.31870HepG2TIA1
COX7BENSG00000131174.4375.490701049.48350-1.4828011.7206010.81790HepG2TIAL1
COX7BENSG00000131174.4743.845401096.21620-0.559503.395201.77500HepG2TRA2A
COX7BENSG00000131174.41345.525601677.00290-0.317702.661501.80660HepG2TUFM
COX7BENSG00000131174.4570.374801775.14890-1.6380031.9316029.25210HepG2UBE2L3
COX7BENSG00000131174.41166.14430554.039601.0736016.1125014.31680HepG2UCHL5
COX7BENSG00000131174.41135.68900837.968500.438505.549504.74960HepG2UTP3
COX7BENSG00000131174.41243.50570923.227700.429603.274502.49000HepG2XRN2
COX7BENSG00000131174.4676.278401090.73260-0.689605.372703.49990HepG2ZRANB2
COX7BENSG00000131174.47454.733304359.617500.7739035.3719033.41100K562AGGF1
COX7BENSG00000131174.46232.036004790.500300.379404.334003.04440K562AKAP8
COX7BENSG00000131174.48588.669104536.364800.9208017.5190015.60520K562AKAP8L
COX7BENSG00000131174.45740.688204759.710600.270203.612602.55660K562ATP5C1
COX7BENSG00000131174.43354.373404124.50820-0.298205.204803.87310K562BCLAF1
COX7BENSG00000131174.42044.914702904.19370-0.506104.370503.26660K562BOP1
COX7BENSG00000131174.41039.854001785.05040-0.7796010.887508.36340K562CCAR1
COX7BENSG00000131174.46263.175605210.030400.265503.069901.81920K562CCDC124
COX7BENSG00000131174.42165.662003088.10030-0.511905.404104.31620K562CPSF6
COX7BENSG00000131174.42176.469603129.05320-0.5237010.035307.85520K562CSTF2
COX7BENSG00000131174.43871.618205482.75530-0.5020013.4451012.11840K562DDX47
COX7BENSG00000131174.41176.123101998.27760-0.7647010.452307.73380K562DHX30
COX7BENSG00000131174.46452.126504881.546600.402305.900304.55500K562DKC1
COX7BENSG00000131174.41416.410501919.56730-0.438504.341502.63100K562DNAJC21
COX7BENSG00000131174.43165.040704659.34170-0.5579014.2395012.79870K562EIF2S2
COX7BENSG00000131174.4816.523301815.73900-1.1530011.815909.74300K562EIF3A
COX7BENSG00000131174.47058.529408651.04640-0.293504.699603.48800K562EIF4G2
COX7BENSG00000131174.43629.703702813.687900.367305.326803.42450K562EWSR1
COX7BENSG00000131174.46038.125703827.183400.657704.054303.01330K562FIP1L1
COX7BENSG00000131174.41817.306202662.91590-0.551205.031003.75600K562FTO
COX7BENSG00000131174.42564.062003295.68560-0.362102.842801.40100K562GEMIN5
COX7BENSG00000131174.41954.148202948.46310-0.593405.373904.27380K562GPKOW
COX7BENSG00000131174.47405.599206208.582900.254302.439901.72810K562GRSF1
COX7BENSG00000131174.43679.280904434.29730-0.269302.722101.65800K562HNRNPA1
COX7BENSG00000131174.41890.257602959.62420-0.6468011.2837010.14660K562HNRNPC
COX7BENSG00000131174.45292.546803148.383500.749304.806703.54440K562HNRNPM
COX7BENSG00000131174.41064.389501802.44620-0.759909.912207.23610K562KHDRBS1
COX7BENSG00000131174.47070.932004814.268900.554509.257607.51320K562KIF1C
COX7BENSG00000131174.43503.497804406.37220-0.330803.606702.63960K562MAGOH
COX7BENSG00000131174.46579.368004608.397800.513605.411003.73500K562MAK16
COX7BENSG00000131174.47128.831505393.190000.402405.250903.91310K562MBNL1
COX7BENSG00000131174.42234.118402877.99220-0.365403.292702.33610K562METAP2
COX7BENSG00000131174.43319.146203770.09720-0.183802.355701.60850K562MTPAP
COX7BENSG00000131174.46906.655503780.231000.869408.143606.31910K562NAA15
COX7BENSG00000131174.43307.955504188.81640-0.3406010.212708.90230K562NSUN2
COX7BENSG00000131174.45921.010802919.384501.020103.243702.14740K562PABPN1
COX7BENSG00000131174.47449.184508889.22500-0.255003.007001.50780K562PNPT1
COX7BENSG00000131174.42307.818503033.99600-0.394702.457901.70560K562POLR2G
COX7BENSG00000131174.47397.883904345.288700.767606.930205.52770K562PPIG
COX7BENSG00000131174.44084.169303198.880000.352403.359402.52980K562PRPF8
COX7BENSG00000131174.42872.938604281.05310-0.5754010.281109.05700K562PTBP1
COX7BENSG00000131174.47184.213809438.92250-0.393804.727003.66380K562PUF60
COX7BENSG00000131174.48174.779409836.98540-0.267004.170602.98440K562PUM2
COX7BENSG00000131174.46467.222804498.935800.523507.131806.30610K562PUS1
COX7BENSG00000131174.46628.264004383.446800.5965015.0829013.68280K562RBM15
COX7BENSG00000131174.43074.710104105.11720-0.417004.643203.52140K562RBM22
COX7BENSG00000131174.44830.616403967.193400.284002.804701.46700K562RBM25
COX7BENSG00000131174.42544.031903258.51410-0.357102.423901.66100K562RPS19
COX7BENSG00000131174.43497.621704133.44180-0.241002.898102.06680K562SF3A3
COX7BENSG00000131174.42070.887502803.77510-0.437103.604302.48610K562SF3B1
COX7BENSG00000131174.41532.366501966.20760-0.359703.102301.75840K562SLBP
COX7BENSG00000131174.43582.456804234.81380-0.241304.461603.30450K562SRPK2
COX7BENSG00000131174.42416.587903097.37670-0.358102.608601.62400K562SUPV3L1
COX7BENSG00000131174.43161.817704247.51850-0.425904.437903.53640K562TARDBP
COX7BENSG00000131174.43510.668004097.19980-0.222902.095701.39030K562TIA1
COX7BENSG00000131174.41718.351802552.34590-0.570806.250904.78930K562TIAL1
COX7BENSG00000131174.41952.602002711.73560-0.473805.582004.12430K562TRIM56
COX7BENSG00000131174.45342.659104054.293400.398003.264302.05640K562U2AF1
COX7BENSG00000131174.48382.9669010642.30230-0.344304.099702.38620K562UBE2L3
COX7BENSG00000131174.42993.066404441.49880-0.5694018.0519016.39240K562UPF1
COX7BENSG00000131174.42641.455903337.89560-0.337602.697501.51020K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for COX7B is not available on ENCORE database.





5 RBPs can affect the splicing of COX7B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECOX7BENSG00000131174.4chrX+771581467715826477154934771550907716068077160772-0.059000.000000.00259excludedHepG2GRWD1
SECOX7BENSG00000131174.4chrX+7715806577158211771549347715509077160680771628700.221000.000010.00015includedK562AQR
SECOX7BENSG00000131174.4chrX+771581467715821177154934771550907716068077162870-0.116000.001200.01430excludedK562AQR
SECOX7BENSG00000131174.4chrX+771581467715826477154934771550907716068077160772-0.053000.000000.00000excludedK562PUS1
SECOX7BENSG00000131174.4chrX+771581467715821177154934771550907716068077160772-0.200000.000020.00169excludedK562TARDBP
SECOX7BENSG00000131174.4chrX+7715724077157364771549347715509077158139771582640.088000.000000.00000includedK562HNRNPC
A3SSCOX7BENSG00000131174.4chrX+7715806577158211771581467715821177154934771550900.689000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for COX7B is not avaliable on ENCORE database.