URB1

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	URB1	ENSG00000142207.6	4.13	6.00	5.06	ENCSR000AEF
HepG2	URB1	ENSG00000142207.6	9.07	7.08	8.07	ENCSR985KAT
K562	URB1	ENSG00000142207.6	16.61	14.48	15.54	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for URB1 is not avaliable on ENCORE database.

Proteins bound to RNA

URB1 RNA is bound by 25 proteins.

eCLIP assay for URB1 is not avaliable on ENCORE database.

25 proteins are bound to URB1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr21	33686018	33686080	-	3'-UTR,intron-Distal	3.40824	4.01088	HepG2	RBFOX2
chr21	33685253	33685315	-	3'-UTR,intron-Distal	4.07482	5.81489	K562	UPF1
chr21	33686762	33686810	-	3'-UTR,intron-Distal	3.53641	5.67957	K562	UPF1
chr21	33686887	33686993	-	3'-UTR,intron-Distal	4.74696	9.20161	K562	UPF1
chr21	33686919	33687001	-	3'-UTR,intron-Distal	4.06798	3.35877	HepG2	UPF1
chr21	33683650	33683709	-	3'-UTR,intron-Distal	3.46041	3.95400	K562	UPF1
chr21	33683886	33683948	-	3'-UTR,intron-Distal	4.19013	3.69433	K562	UPF1
chr21	33765213	33765311	-	5'-UTR,CDS,intron-Distal	4.26396	6.83513	K562	FMR1
chr21	33765193	33765252	-	5'-UTR,CDS,intron-Distal	3.68336	5.08507	K562	ZNF622
chr21	33765150	33765315	-	5'-UTR,CDS,intron-Distal	3.24442	4.63906	HepG2	NCBP2
chr21	33765234	33765314	-	5'-UTR,intron-Distal	4.09255	6.52856	K562	FXR2
chr21	33765163	33765230	-	5'-UTR,CDS,intron-Distal	4.06442	5.59736	K562	FXR2
chr21	33706511	33706554	-	CDS,intron-Distal,intron-Proximal	4.80641	4.23016	K562	FMR1
chr21	33735421	33735466	-	CDS,intron-Distal,intron-Proximal	4.78003	4.35676	HepG2	PRPF8
chr21	33747727	33747780	-	CDS,intron-Distal	4.04745	3.83824	K562	BUD13
chr21	33689130	33689264	-	CDS,intron-Distal	5.82923	11.28272	K562	FMR1
chr21	33688903	33688958	-	CDS,intron-Distal	4.86234	5.57576	K562	FXR2
chr21	33733336	33733417	-	CDS,intron-Distal	4.26548	6.28735	K562	DDX24
chr21	33745953	33746028	-	CDS,intron-Distal,intron-Proximal	3.53570	8.99805	HepG2	BCLAF1
chr21	33689113	33689241	-	CDS,intron-Distal	6.22518	16.34854	K562	FXR2
chr21	33706512	33706592	-	CDS,intron-Distal,intron-Proximal	5.50016	8.56325	K562	FXR2
chr21	33690143	33690214	-	CDS,intron-Distal	4.84969	8.45761	K562	YBX3
chr21	33757852	33757916	-	CDS,intron-Distal,intron-Proximal	3.74130	4.74886	HepG2	BCLAF1
chr21	33729814	33729860	-	CDS,intron-Distal,intron-Proximal	4.73650	5.70555	K562	PRPF8
chr21	33719549	33719602	-	CDS,intron-Distal	5.55644	7.01517	K562	FMR1
chr21	33735464	33735487	-	CDS,intron-Distal,intron-Proximal	3.35496	3.86355	HepG2	PPIG
chr21	33729935	33729966	-	CDS,intron-Distal,intron-Proximal	3.43056	3.28366	HepG2	BCLAF1
chr21	33740885	33740907	-	CDS,intron-Distal	4.38136	3.89826	HepG2	BCLAF1
chr21	33719412	33719514	-	CDS,intron-Distal	4.33219	10.79736	K562	FXR2
chr21	33738865	33738943	-	CDS,intron-Distal,intron-Proximal	3.42918	6.40795	K562	PRPF8
chr21	33733314	33733374	-	CDS,intron-Distal,intron-Proximal	3.01976	4.63108	HepG2	PPIG
chr21	33726257	33726372	-	CDS,intron-Distal	3.04193	4.70577	HepG2	G3BP1
chr21	33735463	33735494	-	CDS,intron-Distal,intron-Proximal	3.34584	3.36945	K562	ZNF622
chr21	33709356	33709428	-	CDS,intron-Distal,intron-Proximal	5.70173	16.15035	HepG2	PRPF8
chr21	33723199	33723277	-	CDS,intron-Distal,intron-Proximal	4.07707	4.52312	K562	AQR
chr21	33765081	33765121	-	CDS,intron-Distal	3.93454	5.29818	K562	FXR2
chr21	33735600	33735667	-	CDS,intron-Distal,intron-Proximal	3.96597	5.16342	K562	SF3B4
chr21	33706510	33706563	-	CDS,intron-Distal,intron-Proximal	3.06903	4.68592	HepG2	PPIG
chr21	33747596	33747735	-	CDS,intron-Distal,intron-Proximal	3.61560	6.70109	K562	PRPF8
chr21	33734299	33734331	-	CDS,intron-Distal,intron-Proximal	3.46330	4.40383	K562	UCHL5
chr21	33706402	33706475	-	CDS,intron-Distal,intron-Proximal	4.46581	5.93840	HepG2	PRPF8
chr21	33719336	33719396	-	CDS,intron-Distal	4.76941	5.96254	K562	FMR1
chr21	33732155	33732221	-	CDS,intron-Distal,intron-Proximal	3.14022	5.07297	K562	BUD13
chr21	33706563	33706647	-	CDS,intron-Distal,intron-Proximal	3.38980	6.27819	HepG2	PPIG
chr21	33706596	33706667	-	CDS,intron-Distal,intron-Proximal	4.21504	3.59236	HepG2	AQR
chr21	33727757	33727870	-	CDS,intron-Distal,intron-Proximal	3.63966	4.04629	HepG2	G3BP1
chr21	33721570	33721614	-	CDS,intron-Distal,intron-Proximal	3.10572	6.02950	HepG2	PRPF8
chr21	33706492	33706596	-	CDS,intron-Distal,intron-Proximal	4.64789	6.50203	HepG2	GRWD1
chr21	33694740	33694800	-	CDS,intron-Distal,intron-Proximal	5.50267	10.25778	K562	PRPF8
chr21	33757855	33757920	-	CDS,intron-Distal	3.40984	5.12958	K562	UCHL5
chr21	33706426	33706507	-	CDS,intron-Distal,intron-Proximal	3.07499	4.20336	HepG2	AQR
chr21	33717868	33717889	-	CDS,intron-Distal,intron-Proximal	3.87220	3.18234	K562	BUD13
chr21	33740784	33740880	-	CDS,intron-Distal	3.32599	7.33138	HepG2	BCLAF1
chr21	33696885	33696908	-	CDS,intron-Distal	3.19926	4.11795	K562	YBX3
chr21	33705674	33705727	-	CDS,intron-Distal	3.04745	3.01994	K562	BUD13
chr21	33734301	33734331	-	CDS,intron-Distal,intron-Proximal	3.45316	3.64266	HepG2	PPIG
chr21	33687371	33687420	-	CDS,intron-Distal	4.37220	4.67744	K562	BUD13
chr21	33723124	33723184	-	CDS,intron-Distal	4.24523	5.23082	K562	DDX24
chr21	33740785	33740831	-	CDS,intron-Distal	3.21455	3.43213	K562	UCHL5
chr21	33744909	33744942	-	CDS,intron-Distal,intron-Proximal	3.27499	4.69671	HepG2	PPIG
chr21	33709369	33709404	-	CDS,intron-Distal,intron-Proximal	4.18249	3.93614	HepG2	AQR
chr21	33719336	33719412	-	CDS,intron-Distal	5.35690	7.22868	K562	FXR2
chr21	33735586	33735648	-	CDS,intron-Distal,intron-Proximal	4.35370	8.31636	HepG2	U2AF2
chr21	33706577	33706667	-	CDS,intron-Distal,intron-Proximal	3.15307	6.19808	K562	AQR
chr21	33756682	33756741	-	CDS,intron-Distal	3.39536	4.74886	HepG2	BCLAF1
chr21	33746058	33746082	-	CDS,intron-Distal,intron-Proximal	4.34659	3.45943	HepG2	BCLAF1
chr21	33756681	33756758	-	CDS,intron-Distal	3.89961	6.82724	K562	YBX3
chr21	33735539	33735595	-	CDS,intron-Distal	3.79107	4.09885	HepG2	BCLAF1
chr21	33740815	33740908	-	CDS,intron-Distal,intron-Proximal	3.88441	11.55292	HepG2	PPIG
chr21	33733394	33733448	-	CDS,intron-Distal,intron-Proximal	4.64582	9.44509	HepG2	U2AF2
chr21	33756579	33756663	-	CDS,intron-Distal,intron-Proximal	4.41099	9.68077	HepG2	PRPF8
chr21	33697680	33697703	-	CDS,intron-Distal,intron-Proximal	3.99616	3.28461	K562	BUD13
chr21	33716911	33716989	-	CDS,intron-Distal	3.25086	3.22540	HepG2	G3BP1
chr21	33727765	33727803	-	CDS,intron-Distal	5.01552	4.17466	K562	DDX24
chr21	33694888	33694974	-	CDS,intron-Distal,intron-Proximal	3.50124	3.84691	HepG2	SF3B4
chr21	33735463	33735500	-	CDS,intron-Distal,intron-Proximal	3.72954	5.08388	K562	UCHL5
chr21	33719609	33719666	-	CDS,intron-Distal	5.38897	6.89655	K562	FXR2
chr21	33734297	33734357	-	CDS,intron-Distal,intron-Proximal	3.82724	3.99381	K562	BUD13
chr21	33732054	33732107	-	CDS,intron-Distal,intron-Proximal	4.12613	5.26367	K562	AQR
chr21	33709748	33709818	-	CDS,intron-Distal	3.98778	8.98325	HepG2	PPIG
chr21	33734288	33734355	-	CDS,intron-Distal,intron-Proximal	4.93262	4.48002	K562	AQR
chr21	33717042	33717103	-	CDS,intron-Distal,intron-Proximal	5.28459	7.23718	K562	AQR
chr21	33756616	33756653	-	CDS,intron-Distal,intron-Proximal	3.75289	5.40651	HepG2	PPIG
chr21	33706606	33706696	-	CDS,intron-Distal,intron-Proximal	3.64900	4.52919	HepG2	SF3B4
chr21	33706594	33706653	-	CDS,intron-Distal,intron-Proximal	3.39412	7.87808	HepG2	BUD13
chr21	33738934	33738979	-	CDS,intron-Distal	3.81525	4.14015	K562	DDX24
chr21	33744773	33744834	-	CDS,intron-Distal,intron-Proximal	3.51595	3.20886	K562	PRPF8
chr21	33706554	33706632	-	CDS,intron-Distal	3.37983	4.08293	K562	FMR1
chr21	33719514	33719598	-	CDS,intron-Distal	5.38798	14.51071	K562	FXR2
chr21	33745955	33746013	-	CDS,intron-Distal,intron-Proximal	3.45316	8.12996	HepG2	PPIG
chr21	33690035	33690099	-	CDS,intron-Distal	4.47335	3.71264	HepG2	FXR2
chr21	33755832	33755866	-	CDS,intron-Distal,intron-Proximal	3.18221	3.80065	HepG2	PPIG
chr21	33757921	33757991	-	CDS,intron-Distal	3.31557	5.65349	K562	UCHL5
chr21	33733347	33733405	-	CDS,intron-Distal	3.44192	5.15500	HepG2	BCLAF1
chr21	33734293	33734331	-	CDS,intron-Distal,intron-Proximal	3.33362	3.02345	K562	ZNF622
chr21	33755684	33755745	-	CDS,intron-Distal,intron-Proximal	3.61151	3.98203	HepG2	PRPF8
chr21	33732121	33732219	-	CDS,intron-Distal,intron-Proximal	4.01593	10.98900	HepG2	PPIG
chr21	33734135	33734244	-	CDS,intron-Distal,intron-Proximal	4.23886	12.76115	HepG2	PRPF8
chr21	33755770	33755827	-	CDS,intron-Distal	4.20222	5.12157	K562	TROVE2
chr21	33739009	33739075	-	CDS,intron-Distal,intron-Proximal	4.27952	5.52578	K562	U2AF2
chr21	33733376	33733491	-	CDS,intron-Distal,intron-Proximal	4.02172	3.77215	K562	U2AF2
chr21	33689062	33689130	-	CDS,intron-Distal	3.35617	5.46795	K562	FMR1
chr21	33725202	33725245	-	CDS,intron-Distal,intron-Proximal	3.57767	4.28285	K562	AQR
chr21	33745970	33746012	-	CDS,intron-Distal	5.27444	4.75872	K562	DDX24
chr21	33738881	33738943	-	CDS,intron-Distal,intron-Proximal	3.65301	8.47339	HepG2	PRPF8
chr21	33727766	33727850	-	CDS,intron-Distal	3.15371	6.02234	K562	UCHL5
chr21	33739018	33739084	-	CDS,intron-Distal,intron-Proximal	4.02197	10.66752	HepG2	U2AF2
chr21	33705578	33705635	-	CDS,intron-Distal,intron-Proximal	5.03551	5.68502	HepG2	PRPF8
chr21	33689059	33689104	-	CDS,intron-Distal	4.99341	6.56513	K562	FXR2
chr21	33720067	33720149	-	CDS,intron-Distal,intron-Proximal	4.00797	6.79537	K562	AQR
chr21	33744747	33744827	-	CDS,intron-Distal,intron-Proximal	4.35879	6.01372	K562	AQR
chr21	33725136	33725193	-	CDS,intron-Distal	5.03086	6.23448	K562	FXR2
chr21	33726347	33726409	-	CDS,intron-Distal	5.03378	6.13315	HepG2	BCLAF1
chr21	33694744	33694813	-	CDS,intron-Distal,intron-Proximal	6.26676	9.06713	HepG2	PRPF8
chr21	33726199	33726231	-	intron-Distal,intron-Proximal	4.18827	6.48405	K562	AQR
chr21	33721551	33721605	-	intron-Distal,intron-Proximal	6.14582	12.46873	K562	AQR
chr21	33734192	33734200	-	intron-Distal,intron-Proximal	4.87488	11.12698	K562	AQR
chr21	33733578	33733654	-	intron-Distal	4.77974	7.98209	HepG2	U2AF2
chr21	33749536	33749562	-	intron-Distal	4.00801	400.00000	HepG2	DKC1
chr21	33704054	33704121	-	intron-Distal	4.35089	3.60235	HepG2	HNRNPM
chr21	33734175	33734192	-	intron-Distal,intron-Proximal	4.33115	10.30697	K562	AQR
chr21	33719216	33719264	-	intron-Distal,intron-Proximal	3.97385	5.47926	K562	AQR
chr21	33738779	33738824	-	intron-Distal	4.21938	3.62366	HepG2	HNRNPM
chr21	33716380	33716467	-	intron-Distal	3.29226	3.93901	K562	KHSRP
chr21	33708620	33708702	-	intron-Distal	3.33984	3.69826	K562	TARDBP
chr21	33709391	33709402	-	intron-Distal,intron-Proximal	6.32264	16.98862	K562	AQR
chr21	33698149	33698218	-	intron-Distal	3.90560	3.29248	HepG2	SUGP2
chr21	33749575	33749582	-	intron-Distal	4.77295	400.00000	HepG2	DKC1
chr21	33749562	33749565	-	intron-Distal	4.32874	400.00000	HepG2	DKC1
chr21	33708914	33708986	-	intron-Distal	4.08675	3.91772	K562	TARDBP
chr21	33749565	33749575	-	intron-Distal	4.72096	400.00000	HepG2	DKC1
chr21	33724968	33725019	-	intron-Distal,intron-Proximal	4.77754	10.60410	K562	AQR
chr21	33749582	33749623	-	intron-Distal	4.81566	400.00000	HepG2	DKC1
chr21	33726127	33726183	-	intron-Distal,intron-Proximal	4.94556	5.26064	K562	AQR
chr21	33749522	33749526	-	intron-Distal	4.03742	400.00000	HepG2	DKC1
chr21	33749526	33749536	-	intron-Distal	3.87749	400.00000	HepG2	DKC1
chr21	33726185	33726241	-	intron-Distal,intron-Proximal	4.82376	5.01842	HepG2	PRPF8
chr21	33716798	33716878	-	intron-Distal,intron-Proximal	4.62714	3.85435	K562	PRPF8
chr21	33738879	33738927	-	intron-Distal,intron-Proximal	3.59640	4.41130	K562	AQR
chr21	33727707	33727757	-	intron-Distal,intron-Proximal	4.98607	6.04760	K562	AQR
chr21	33705544	33705616	-	intron-Distal,intron-Proximal	5.12613	6.04760	K562	AQR
chr21	33704304	33704367	-	intron-Distal	4.15173	4.53347	HepG2	SUGP2
chr21	33749495	33749500	-	intron-Distal	4.68313	400.00000	HepG2	DKC1
chr21	33692779	33692832	-	intron-Distal,intron-Proximal	4.67680	4.68690	HepG2	PRPF8
chr21	33704289	33704377	-	intron-Distal	4.40863	3.97018	HepG2	HNRNPM
chr21	33749500	33749522	-	intron-Distal	4.50091	400.00000	HepG2	DKC1
chr21	33704396	33704469	-	intron-Distal	4.03084	3.27946	HepG2	HNRNPM
chr21	33733458	33733497	-	intron-Distal,intron-Proximal	4.39308	3.42734	K562	PTBP1
chr21	33704440	33704493	-	intron-Distal	3.76779	3.29248	HepG2	SUGP2
chr21	33726231	33726242	-	intron-Distal,intron-Proximal	3.19963	3.49168	K562	AQR
chr21	33703873	33703938	-	intron-Distal	3.47251	4.57452	HepG2	SUGP2
chr21	33740659	33740704	-	intron-Distal,intron-Proximal	4.12714	3.85435	K562	PRPF8
chr21	33721605	33721613	-	intron-Distal,intron-Proximal	4.78958	8.30573	K562	AQR
chr21	33734141	33734169	-	intron-Distal,intron-Proximal	4.55354	12.35151	K562	AQR
chr21	33709360	33709391	-	intron-Distal,intron-Proximal	6.45353	18.07825	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for URB1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for URB1 is not available on ENCORE database.
102 RBPs can affect the levels of URB1.

The Knockdown/knockout RNA-Seq assay for URB1 is not available on ENCORE database.

102 RBPs can affect the gene expression of URB1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
URB1	ENSG00000142207.5	1380.51970	1800.70550	-0.38340	6.03430	5.08260	HepG2	AUH
URB1	ENSG00000142207.5	910.30200	1193.48010	-0.39080	2.15170	1.30130	HepG2	CCAR1
URB1	ENSG00000142207.5	1387.83740	1054.50210	0.39620	5.35240	4.51090	HepG2	CELF1
URB1	ENSG00000142207.5	759.36160	1004.10630	-0.40310	4.56800	3.73580	HepG2	DKC1
URB1	ENSG00000142207.5	537.59420	712.82710	-0.40700	3.58830	2.79400	HepG2	DNAJC21
URB1	ENSG00000142207.5	617.13990	787.02170	-0.35080	1.96180	1.45290	HepG2	EIF2S1
URB1	ENSG00000142207.5	1315.69530	869.66730	0.59720	4.94630	4.09470	HepG2	EIF4A3
URB1	ENSG00000142207.5	1490.57750	846.90380	0.81550	7.14600	6.06790	HepG2	EIF4B
URB1	ENSG00000142207.5	844.43230	1071.52490	-0.34360	2.23160	1.49480	HepG2	EIF4G2
URB1	ENSG00000142207.5	766.27280	546.32760	0.48800	4.00810	3.06930	HepG2	FUBP3
URB1	ENSG00000142207.5	1206.30910	877.71250	0.45870	3.45260	2.68490	HepG2	FXR1
URB1	ENSG00000142207.5	1005.52040	718.72000	0.48430	2.63490	1.55130	HepG2	GRSF1
URB1	ENSG00000142207.5	640.80750	800.49600	-0.32100	1.93640	1.34450	HepG2	HNRNPC
URB1	ENSG00000142207.5	1017.13160	1193.60780	-0.23080	2.05870	1.43390	HepG2	HNRNPF
URB1	ENSG00000142207.5	1409.06890	824.63550	0.77280	10.03360	8.77360	HepG2	HNRNPK
URB1	ENSG00000142207.5	800.87880	1032.70240	-0.36680	4.39470	3.55990	HepG2	HNRNPL
URB1	ENSG00000142207.5	736.79400	979.93120	-0.41140	2.89200	2.25080	HepG2	HNRNPLL
URB1	ENSG00000142207.5	938.73290	1175.36170	-0.32430	2.56980	1.87190	HepG2	IGF2BP1
URB1	ENSG00000142207.5	1189.55270	827.43990	0.52360	4.42480	3.58680	HepG2	IGF2BP2
URB1	ENSG00000142207.5	1224.07600	878.02010	0.47930	3.68670	2.93020	HepG2	MAGOH
URB1	ENSG00000142207.5	1758.09620	882.89290	0.99360	13.16130	11.86000	HepG2	MATR3
URB1	ENSG00000142207.5	675.41550	999.55710	-0.56550	3.10730	2.07590	HepG2	MTPAP
URB1	ENSG00000142207.5	525.55210	753.81750	-0.52040	4.29120	2.77900	HepG2	NAA15
URB1	ENSG00000142207.5	1367.98200	903.65630	0.59810	5.34080	4.47580	HepG2	NCBP2
URB1	ENSG00000142207.5	1203.66560	819.45070	0.55460	2.48630	1.45530	HepG2	NONO
URB1	ENSG00000142207.5	974.00260	787.10070	0.30730	2.93430	2.06520	HepG2	PARN
URB1	ENSG00000142207.5	1486.92870	790.89990	0.91070	17.29350	15.98410	HepG2	PCBP1
URB1	ENSG00000142207.5	1299.10200	804.77300	0.69080	13.49590	12.46900	HepG2	PTBP1
URB1	ENSG00000142207.5	787.26190	1073.18890	-0.44700	3.81040	3.12340	HepG2	PUF60
URB1	ENSG00000142207.5	1754.98800	1139.27670	0.62320	17.61220	16.38300	HepG2	PUM1
URB1	ENSG00000142207.5	993.25610	791.01990	0.32840	2.27420	1.65780	HepG2	RBM25
URB1	ENSG00000142207.5	1090.03320	895.63280	0.28330	2.49180	1.97370	HepG2	NELFE
URB1	ENSG00000142207.5	1160.36220	834.16440	0.47610	4.94440	4.15110	HepG2	RECQL
URB1	ENSG00000142207.5	1003.79870	1285.82690	-0.35720	2.82330	2.13420	HepG2	RPLP0
URB1	ENSG00000142207.5	941.33050	522.98310	0.84780	11.68290	10.52660	HepG2	RPS19
URB1	ENSG00000142207.5	1007.36070	764.55720	0.39780	2.37060	1.62570	HepG2	RPS2
URB1	ENSG00000142207.5	1077.24950	780.51200	0.46480	3.15030	1.99870	HepG2	RPS5
URB1	ENSG00000142207.5	683.29400	524.86870	0.38050	2.17350	1.33660	HepG2	SERBP1
URB1	ENSG00000142207.5	616.49290	969.89750	-0.65370	6.78870	5.72500	HepG2	SF3B1
URB1	ENSG00000142207.5	1151.35140	837.86760	0.45840	5.96750	5.15560	HepG2	SF3B4
URB1	ENSG00000142207.5	978.45740	825.81930	0.24460	2.36580	1.76470	HepG2	SMN1
URB1	ENSG00000142207.5	1193.47260	774.36040	0.62400	4.57970	3.32160	HepG2	SMNDC1
URB1	ENSG00000142207.5	1725.38950	1951.75590	-0.17790	2.02560	1.57640	HepG2	SRFBP1
URB1	ENSG00000142207.5	1037.03100	874.55440	0.24570	2.01430	1.59300	HepG2	SRSF1
URB1	ENSG00000142207.5	1306.91420	1059.66480	0.30250	3.57740	2.88210	HepG2	SRSF5
URB1	ENSG00000142207.5	982.35450	1172.68460	-0.25550	2.44780	1.79030	HepG2	SRSF7
URB1	ENSG00000142207.5	891.25180	711.49830	0.32490	3.28620	2.69520	HepG2	SRSF9
URB1	ENSG00000142207.5	979.35410	1694.51740	-0.79100	21.59640	20.46010	HepG2	SSB
URB1	ENSG00000142207.5	1770.74080	1205.09050	0.55510	13.27960	12.08540	HepG2	SUCLG1
URB1	ENSG00000142207.5	642.30140	888.35560	-0.46790	2.95010	2.25540	HepG2	SUPV3L1
URB1	ENSG00000142207.5	1027.97930	786.08920	0.38690	3.97640	3.32300	HepG2	TAF15
URB1	ENSG00000142207.5	941.15210	779.59810	0.27160	2.52750	1.98370	HepG2	TRIM56
URB1	ENSG00000142207.5	1347.31140	1048.52420	0.36160	2.08850	1.33880	HepG2	TUFM
URB1	ENSG00000142207.5	1631.22380	1109.88850	0.55540	4.30630	3.24900	HepG2	UBE2L3
URB1	ENSG00000142207.5	509.25720	813.45690	-0.67570	4.25220	2.99340	HepG2	UPF2
URB1	ENSG00000142207.5	1988.37520	972.42960	1.03180	37.00840	35.19300	HepG2	UTP3
URB1	ENSG00000142207.5	588.72910	874.48870	-0.57080	4.45340	3.54080	HepG2	XRN2
URB1	ENSG00000142207.5	531.69360	1000.04990	-0.91140	13.80960	12.50050	HepG2	ZC3H8
URB1	ENSG00000142207.5	1290.07750	1107.74760	0.21970	2.38720	1.86810	HepG2	ZNF622
URB1	ENSG00000142207.5	2285.36590	1819.88200	0.32850	3.01820	1.77960	K562	AARS
URB1	ENSG00000142207.5	1616.05620	1972.28060	-0.28740	3.82140	3.17340	K562	AGGF1
URB1	ENSG00000142207.5	3372.22850	4109.37690	-0.28520	2.45990	1.90020	K562	AQR
URB1	ENSG00000142207.5	1087.62190	1657.60840	-0.60790	6.76320	5.38100	K562	BOP1
URB1	ENSG00000142207.5	1864.20610	2357.09780	-0.33850	3.95900	2.51520	K562	CCDC124
URB1	ENSG00000142207.5	1186.62470	1762.40190	-0.57070	8.02470	6.67110	K562	CPSF6
URB1	ENSG00000142207.5	5580.10750	3991.04410	0.48340	12.58210	11.29840	K562	DDX47
URB1	ENSG00000142207.5	2600.78200	2208.54780	0.23570	2.41810	1.60730	K562	DKC1
URB1	ENSG00000142207.5	1660.55400	2558.42290	-0.62360	8.17190	6.52910	K562	EFTUD2
URB1	ENSG00000142207.5	1833.65450	2197.27900	-0.26100	3.20810	1.89400	K562	EIF2S1
URB1	ENSG00000142207.5	2322.78960	3739.87680	-0.68710	19.42150	17.77080	K562	EIF2S2
URB1	ENSG00000142207.5	2187.17220	1591.17900	0.45890	2.34030	1.42180	K562	EIF3A
URB1	ENSG00000142207.5	2461.36980	1475.77120	0.73790	17.67880	15.59960	K562	EIF3G
URB1	ENSG00000142207.5	1231.60470	1578.82060	-0.35830	3.15800	1.44260	K562	FASTKD2
URB1	ENSG00000142207.5	2063.29490	3028.84200	-0.55380	7.36110	5.91750	K562	FIP1L1
URB1	ENSG00000142207.5	974.75250	1793.41780	-0.87960	13.96810	11.98640	K562	FMR1
URB1	ENSG00000142207.5	1032.63460	1520.17700	-0.55790	5.33580	4.02120	K562	FTO
URB1	ENSG00000142207.5	3785.89880	2173.46720	0.80050	25.97510	24.23590	K562	FXR1
URB1	ENSG00000142207.5	956.57980	1301.35000	-0.44410	2.70660	2.00920	K562	G3BP2
URB1	ENSG00000142207.5	1230.25750	1682.57100	-0.45170	3.32590	2.45640	K562	GPKOW
URB1	ENSG00000142207.5	3531.97880	4983.64780	-0.49670	7.61740	6.34880	K562	GRSF1
URB1	ENSG00000142207.5	1507.16430	1991.24000	-0.40180	4.32170	3.59240	K562	HNRNPC
URB1	ENSG00000142207.5	2373.67710	1791.99280	0.40550	3.45930	2.05940	K562	HNRNPK
URB1	ENSG00000142207.5	2247.24900	4106.41040	-0.86970	16.90790	15.06150	K562	HSPD1
URB1	ENSG00000142207.5	853.88680	1436.93940	-0.75090	6.72070	5.19690	K562	KRR1
URB1	ENSG00000142207.5	2865.29120	1885.71500	0.60350	9.73600	8.09730	K562	MAGOH
URB1	ENSG00000142207.5	1715.50980	2084.81390	-0.28130	2.60430	1.57150	K562	MAK16
URB1	ENSG00000142207.5	2799.03590	1881.85870	0.57270	9.01670	7.25320	K562	MATR3
URB1	ENSG00000142207.5	4132.04640	5627.02650	-0.44550	5.02070	3.50350	K562	MSI2
URB1	ENSG00000142207.5	1656.39450	2086.97080	-0.33340	3.56860	2.15390	K562	NCBP2
URB1	ENSG00000142207.5	3158.96600	3719.79350	-0.23580	5.12860	4.15730	K562	NSUN2
URB1	ENSG00000142207.5	2446.81870	3594.08470	-0.55470	5.99850	4.77000	K562	PCBP3
URB1	ENSG00000142207.5	1822.66240	2424.11210	-0.41140	3.43510	1.38990	K562	PES1
URB1	ENSG00000142207.5	1487.81200	1944.09440	-0.38590	3.70990	2.01730	K562	PHF6
URB1	ENSG00000142207.5	2853.61700	3729.55350	-0.38620	3.27850	1.56870	K562	PKM
URB1	ENSG00000142207.5	2083.84890	2756.80800	-0.40370	5.34330	4.23230	K562	POLR2G
URB1	ENSG00000142207.5	2310.29320	3438.39250	-0.57370	7.53480	6.03710	K562	PPIG
URB1	ENSG00000142207.5	1823.21430	2489.64330	-0.44950	4.47400	3.52070	K562	PRPF8
URB1	ENSG00000142207.5	1440.03560	1785.36470	-0.31010	2.68960	1.80090	K562	PSIP1
URB1	ENSG00000142207.5	3022.63160	1832.10540	0.72220	14.53510	13.07840	K562	PTBP1
URB1	ENSG00000142207.5	4721.92820	5759.89090	-0.28670	2.26330	1.52650	K562	PUF60
URB1	ENSG00000142207.5	4749.15810	6002.84420	-0.33800	3.24960	2.20980	K562	PUM2
URB1	ENSG00000142207.5	1099.69120	1766.93730	-0.68420	2.93010	1.33670	K562	RBM39
URB1	ENSG00000142207.5	2398.04760	1848.62920	0.37530	3.21550	2.02710	K562	NELFE
URB1	ENSG00000142207.5	1782.27700	1409.79820	0.33810	2.33620	1.42530	K562	RPS3
URB1	ENSG00000142207.5	1819.04440	2545.45450	-0.48470	3.41320	1.92770	K562	RRP9
URB1	ENSG00000142207.5	3410.26740	2456.31190	0.47330	6.46430	4.81390	K562	SAFB
URB1	ENSG00000142207.5	894.95230	1600.50940	-0.83860	10.10980	8.16790	K562	SF3B1
URB1	ENSG00000142207.5	1663.34480	1353.25500	0.29760	2.81890	1.95520	K562	SF3B4
URB1	ENSG00000142207.5	1266.70470	1796.09680	-0.50380	6.52220	5.44730	K562	SRSF1
URB1	ENSG00000142207.5	2489.93340	3012.20830	-0.27470	3.61860	2.26910	K562	SRSF7
URB1	ENSG00000142207.5	3233.81290	2765.11920	0.22580	2.10250	1.38570	K562	SYNCRIP
URB1	ENSG00000142207.5	1448.51910	1817.71820	-0.32750	2.48580	1.81280	K562	TARDBP
URB1	ENSG00000142207.5	1242.54690	1717.21670	-0.46680	4.03020	2.88670	K562	TIAL1
URB1	ENSG00000142207.5	3456.58930	4688.24680	-0.43970	10.06060	7.62380	K562	TROVE2
URB1	ENSG00000142207.5	1489.09680	2551.13710	-0.77670	11.53590	9.41280	K562	UCHL5
URB1	ENSG00000142207.5	3087.13670	3944.17190	-0.35350	4.17670	3.31160	K562	UPF1
URB1	ENSG00000142207.5	2334.71690	3374.90990	-0.53160	7.63480	6.14040	K562	WDR3
URB1	ENSG00000142207.5	3997.87200	3509.46950	0.18790	2.71080	1.87260	K562	WDR43
URB1	ENSG00000142207.5	3313.53690	4629.77170	-0.48260	5.90680	4.56980	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for URB1 is not available on ENCORE database.

8 RBPs can affect the splicing of URB1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	URB1	ENSG00000142207.5	chr21	-	33725018	33725215	33723012	33723231	33726241	33726412	-0.12400	0.00005	0.00096	excluded	K562	AQR
A3SS	URB1	ENSG00000142207.5	chr21	-	33694787	33695036	33694787	33694894	33696800	33696912	0.16400	0.00002	0.04791	longer	K562	DDX3X
A3SS	URB1	ENSG00000142207.5	chr21	-	33694787	33694959	33694787	33694894	33696800	33696912	0.14600	0.00123	0.09151	longer	K562	AKAP8L
A3SS	URB1	ENSG00000142207.5	chr21	-	33694787	33695036	33694787	33694894	33696800	33696912	0.19200	0.00002	0.00155	longer	K562	U2AF2
A3SS	URB1	ENSG00000142207.5	chr21	-	33694787	33695036	33694787	33694894	33696800	33696912	0.15600	0.00002	0.00263	longer	K562	SF3B4
A3SS	URB1	ENSG00000142207.5	chr21	-	33711015	33711243	33711015	33711209	33713774	33713886	0.11900	0.00000	0.00000	longer	K562	AQR
A3SS	URB1	ENSG00000142207.5	chr21	-	33750753	33750868	33750753	33750850	33755730	33755937	0.07300	0.00154	0.01024	longer	K562	AQR
A3SS	URB1	ENSG00000142207.5	chr21	-	33691526	33691744	33691526	33691724	33692840	33692950	0.06800	0.00059	0.00434	longer	K562	AQR
A3SS	URB1	ENSG00000142207.5	chr21	-	33709712	33709931	33709712	33709823	33711015	33711157	0.19000	0.00000	0.00000	longer	K562	AQR
A3SS	URB1	ENSG00000142207.5	chr21	-	33694787	33695036	33694787	33694894	33696800	33696912	0.22400	0.00000	0.00000	longer	K562	AQR
A3SS	URB1	ENSG00000142207.5	chr21	-	33706471	33706668	33706471	33706643	33709402	33709466	0.09200	0.00021	0.00168	longer	K562	AQR
A3SS	URB1	ENSG00000142207.5	chr21	-	33694787	33695036	33694787	33694894	33696800	33696912	0.15200	0.00030	0.01846	longer	K562	PUS1
A3SS	URB1	ENSG00000142207.5	chr21	-	33694787	33695036	33694787	33694894	33696800	33696912	0.27900	0.00000	0.00000	longer	K562	U2AF1
A3SS	URB1	ENSG00000142207.5	chr21	-	33694787	33695036	33694787	33694894	33696800	33696912	0.13000	0.00082	0.08461	longer	K562	RBM15
A5SS	URB1	ENSG00000142207.5	chr21	-	33717668	33717884	33717682	33717884	33716878	33717065	0.10300	0.00011	0.00280	longer	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

URB1

General Information

Functions

Localization

Domains (AlphaFold: URB1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for URB1 is not avaliable on ENCORE database.

25 proteins are bound to URB1 RNA:

eCLIP assay for URB1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for URB1 is not available on ENCORE database.

102 RBPs can affect the gene expression of URB1 :

The Knockdown/knockout RNA-Seq assay for URB1 is not available on ENCORE database.

8 RBPs can affect the splicing of URB1 :

The Knockdown/knockout RNA-Seq assay for URB1 is not avaliable on ENCORE database.