CCT3

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CCT3	ENSG00000163468.14	235.01	261.56	248.28	ENCSR000AEF
HepG2	CCT3	ENSG00000163468.14	380.49	417.03	398.76	ENCSR985KAT
K562	CCT3	ENSG00000163468.14	387.58	410.40	398.99	ENCSR000AEO

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	CCT3-BGKcLV28-K562	ENCSR054DGN	CCT3	K562	Released		ENCSR220DTX	CRISPR	KD% = 58.2,63.5652336

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
CCT3	ENCAB809NWD	A303-459A	1			Released, ENCODE4		BGKcLV28-5, Released, ENCODE4

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project
CCT3	K562	CRISPR	ENCSR054DGN	ENCSR220DTX	CCT3-BGKcLV28-5,CCT3-BGKcLV28-6	NT-BGKcLV28-1,NT-BGKcLV28-2	58.2,63.5652336	Released	ENCODE4
CCT3	HepG2	CRISPR			BGHcLV27-53,BGHcLV27-54	BGHcLV27-1,BGHcLV27-2	39.7,55.6	NotSatisfied	ENCODE4
CCT3	HepG2	CRISPR			BGHcLV36-7,BGHcLV36-8	BGHcLV36-1,BGHcLV36-2	0.0,0.0	NotSatisfied	ENCORE2

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CCT3 is not avaliable on ENCORE database.

Proteins bound to RNA

CCT3 RNA is bound by 36 proteins.

eCLIP assay for CCT3 is not avaliable on ENCORE database.

36 proteins are bound to CCT3 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	156280357	156280439	-	3'-UTR,CDS,intron-Distal	3.56241	5.11124	K562	DDX6
chr1	156280861	156280956	-	3'-UTR,CDS,intron-Distal	3.88793	8.23206	K562	FMR1
chr1	156287245	156287321	-	3'-UTR,CDS,intron-Distal	3.52338	8.74319	HepG2	GRWD1
chr1	156290629	156290687	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.94911	6.44064	K562	LIN28B
chr1	156281790	156281836	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.42110	5.28960	K562	AQR
chr1	156280895	156280943	-	3'-UTR,CDS,intron-Distal	3.48556	4.08867	HepG2	LARP4
chr1	156280739	156280852	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.48686	36.73964	K562	RPS3
chr1	156287314	156287324	-	3'-UTR,CDS,intron-Distal	3.54127	10.25575	K562	YBX3
chr1	156288774	156288802	-	3'-UTR,CDS,intron-Distal	3.88551	6.65791	HepG2	BUD13
chr1	156290769	156290775	-	3'-UTR,CDS,intron-Distal	4.04925	39.12910	K562	YBX3
chr1	156286916	156286962	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.02274	6.65114	HepG2	PRPF8
chr1	156278906	156278984	-	3'-UTR,intron-Distal,intron-Proximal	3.03868	11.26783	HepG2	LARP4
chr1	156278761	156278826	-	3'-UTR,intron-Distal,intron-Proximal	5.38684	13.67675	HepG2	SUB1
chr1	156278933	156279022	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.80260	23.33758	K562	RPS3
chr1	156278760	156278811	-	3'-UTR,intron-Distal,intron-Proximal	3.84536	4.25440	K562	TIA1
chr1	156280740	156280784	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.39213	9.65734	HepG2	RPS3
chr1	156278856	156278925	-	3'-UTR,intron-Distal,intron-Proximal	4.48431	4.94898	K562	NOLC1
chr1	156278767	156278832	-	3'-UTR,intron-Distal,intron-Proximal	5.18531	78.87286	K562	PABPC4
chr1	156290746	156290760	-	3'-UTR,CDS,intron-Distal	4.17088	53.92176	K562	YBX3
chr1	156280740	156280755	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.89314	5.49938	HepG2	G3BP1
chr1	156278765	156278817	-	3'-UTR,intron-Distal,intron-Proximal	5.26869	9.63985	K562	IGF2BP1
chr1	156278841	156278906	-	3'-UTR,intron-Distal,intron-Proximal	3.45398	10.68825	HepG2	LARP4
chr1	156286956	156286969	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.92950	11.99473	HepG2	G3BP1
chr1	156280864	156280929	-	3'-UTR,CDS,intron-Distal	4.11600	16.62258	K562	RPS3
chr1	156288775	156288808	-	3'-UTR,CDS,intron-Distal	4.46692	12.13730	HepG2	G3BP1
chr1	156288762	156288808	-	3'-UTR,CDS,intron-Distal	3.90562	7.41979	K562	GRWD1
chr1	156280900	156280979	-	3'-UTR,CDS,intron-Distal	4.47440	7.33217	K562	PUM1
chr1	156288758	156288809	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.63040	7.70026	K562	LIN28B
chr1	156278765	156278811	-	3'-UTR,intron-Distal,intron-Proximal	3.44938	5.22473	K562	APOBEC3C
chr1	156278926	156279023	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.38032	13.33215	HepG2	RPS3
chr1	156278942	156278969	-	3'-UTR,intron-Distal,intron-Proximal	4.15221	6.82143	HepG2	G3BP1
chr1	156290629	156290644	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.74108	11.99473	HepG2	G3BP1
chr1	156281968	156282013	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.17800	3.97871	K562	METAP2
chr1	156287249	156287337	-	3'-UTR,CDS,intron-Distal	3.01287	10.48700	K562	LIN28B
chr1	156278774	156278820	-	3'-UTR,intron-Distal,intron-Proximal	4.86061	5.48383	HepG2	LARP4
chr1	156281848	156281898	-	3'-UTR,CDS,intron-Distal	3.09170	7.80802	HepG2	G3BP1
chr1	156290793	156290814	-	3'-UTR,CDS,intron-Distal	3.50051	5.49938	HepG2	G3BP1
chr1	156290639	156290795	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.58764	11.02956	K562	METAP2
chr1	156290644	156290695	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.29809	17.13464	HepG2	G3BP1
chr1	156278772	156278851	-	3'-UTR,intron-Distal,intron-Proximal	3.90511	27.70038	K562	PUM2
chr1	156280859	156280949	-	3'-UTR,CDS,intron-Distal	4.06656	16.31987	HepG2	RPS3
chr1	156280434	156280480	-	3'-UTR,CDS,intron-Distal	3.81566	7.18951	HepG2	G3BP1
chr1	156287019	156287068	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.53979	3.96535	HepG2	AQR
chr1	156280352	156280438	-	3'-UTR,CDS,intron-Distal	3.64426	6.31568	K562	APOBEC3C
chr1	156286969	156287038	-	3'-UTR,CDS,intron-Distal	3.25659	12.49626	HepG2	G3BP1
chr1	156288783	156288805	-	3'-UTR,CDS,intron-Distal	4.75404	4.45558	HepG2	GRWD1
chr1	156280797	156280852	-	3'-UTR,CDS,intron-Distal	4.23182	6.61983	HepG2	RPS3
chr1	156290760	156290769	-	3'-UTR,CDS,intron-Distal	4.20003	40.27196	K562	YBX3
chr1	156280782	156280857	-	3'-UTR,CDS,intron-Distal	3.61702	9.78561	HepG2	G3BP1
chr1	156281964	156282013	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.60723	10.56098	K562	GRWD1
chr1	156286967	156287038	-	3'-UTR,CDS,intron-Distal	3.05435	4.92227	HepG2	RPS3
chr1	156280857	156280943	-	3'-UTR,CDS,intron-Distal	4.37474	16.68780	HepG2	G3BP1
chr1	156288775	156288805	-	3'-UTR,CDS,intron-Distal	3.31992	7.58463	K562	ZNF622
chr1	156287215	156287277	-	3'-UTR,CDS,intron-Distal	4.22638	11.24090	HepG2	G3BP1
chr1	156280479	156280537	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.15948	6.91748	K562	SF3B4
chr1	156278847	156278910	-	3'-UTR,intron-Distal,intron-Proximal	3.22635	6.57388	HepG2	SUB1
chr1	156288750	156288808	-	3'-UTR,CDS,intron-Distal	3.79107	8.25092	HepG2	BCLAF1
chr1	156290718	156290740	-	3'-UTR,CDS,intron-Distal	4.24544	47.53688	K562	YBX3
chr1	156290629	156290652	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37213	9.42893	K562	UCHL5
chr1	156280457	156280485	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.58868	4.51027	K562	BUD13
chr1	156278901	156278967	-	3'-UTR,intron-Distal,intron-Proximal	3.64862	13.24252	K562	PABPC4
chr1	156290629	156290650	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.23307	5.94265	K562	GRWD1
chr1	156280458	156280512	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.52731	6.44303	K562	AQR
chr1	156290650	156290714	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.83588	8.80557	K562	GRWD1
chr1	156280815	156280846	-	3'-UTR,CDS,intron-Distal	4.33188	4.41602	K562	FXR2
chr1	156280348	156280377	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.67351	4.77467	K562	SND1
chr1	156287222	156287311	-	3'-UTR,CDS,intron-Distal	3.92888	12.75798	K562	ZNF800
chr1	156281845	156281897	-	3'-UTR,CDS,intron-Distal	4.29822	6.84754	HepG2	GRWD1
chr1	156290775	156290813	-	3'-UTR,CDS,intron-Distal	3.32832	20.19451	K562	YBX3
chr1	156281931	156282013	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.54019	33.89323	HepG2	G3BP1
chr1	156288755	156288808	-	3'-UTR,CDS,intron-Distal	3.62485	18.34104	K562	UCHL5
chr1	156281836	156281892	-	3'-UTR,CDS,intron-Distal	3.32703	6.51943	K562	PUM1
chr1	156290740	156290746	-	3'-UTR,CDS,intron-Distal	3.94676	42.41354	K562	YBX3
chr1	156278832	156278901	-	3'-UTR,intron-Distal,intron-Proximal	3.49872	22.49581	K562	PABPC4
chr1	156281931	156281969	-	3'-UTR,CDS,intron-Distal	5.13011	6.58593	HepG2	BCLAF1
chr1	156305617	156305641	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.93152	4.65365	HepG2	GRWD1
chr1	156304652	156304735	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.65460	13.74275	HepG2	U2AF2
chr1	156294762	156294780	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.39971	7.51794	K562	YBX3
chr1	156303322	156303403	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.52203	11.15723	HepG2	PRPF8
chr1	156294837	156294880	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.48275	7.72566	K562	ZNF800
chr1	156304507	156304530	-	5'-UTR,CDS,intron-Distal	3.41830	6.40070	HepG2	G3BP1
chr1	156303337	156303346	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.55887	6.57674	K562	GRWD1
chr1	156303400	156303433	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.30185	9.32803	HepG2	G3BP1
chr1	156303346	156303366	-	5'-UTR,CDS,intron-Distal	3.16522	8.14727	K562	GRWD1
chr1	156303337	156303343	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.09745	5.87824	HepG2	G3BP1
chr1	156303337	156303346	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.01373	4.59654	HepG2	GRWD1
chr1	156294826	156294874	-	5'-UTR,CDS,intron-Distal	3.18992	8.70419	HepG2	GRWD1
chr1	156305622	156305636	-	5'-UTR,CDS,intron-Distal	5.24615	34.51777	K562	YBX3
chr1	156294806	156294821	-	5'-UTR,CDS,intron-Distal	3.71704	5.10069	HepG2	GRWD1
chr1	156294770	156294809	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.27048	10.44663	HepG2	G3BP1
chr1	156303406	156303421	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.57098	11.63735	K562	YBX3
chr1	156305617	156305622	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.12460	31.85916	K562	YBX3
chr1	156304530	156304548	-	5'-UTR,CDS,intron-Distal	3.46709	30.75132	K562	YBX3
chr1	156305617	156305640	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.19952	3.66602	K562	GRWD1
chr1	156305627	156305687	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.12124	12.41566	K562	BUD13
chr1	156294773	156294806	-	5'-UTR,CDS,intron-Distal	3.07995	3.28855	HepG2	GRWD1
chr1	156294817	156294881	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.92397	13.93125	K562	GRWD1
chr1	156304548	156304566	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.68753	36.28047	K562	YBX3
chr1	156304662	156304729	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.23337	7.08450	HepG2	AQR
chr1	156294776	156294865	-	5'-UTR,CDS,intron-Distal	3.15532	17.76238	K562	UCHL5
chr1	156294823	156294878	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.58110	8.24909	K562	PUM1
chr1	156294836	156294881	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.32802	7.17118	HepG2	PPIG
chr1	156304661	156304708	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.59815	8.74800	HepG2	BCLAF1
chr1	156307977	156308061	-	5'-UTR,intron-Distal,intron-Proximal	3.25034	30.45714	K562	DDX3X
chr1	156294809	156294824	-	5'-UTR,CDS,intron-Distal	3.84964	6.03511	HepG2	G3BP1
chr1	156305644	156305717	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.00368	9.12787	K562	AQR
chr1	156304658	156304663	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.53453	16.64967	K562	YBX3
chr1	156307889	156307976	-	5'-UTR,CDS,intron-Distal	3.74513	12.51748	HepG2	PRPF8
chr1	156304663	156304674	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.71062	25.72122	K562	YBX3
chr1	156294824	156294881	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.69813	16.85739	HepG2	G3BP1
chr1	156294797	156294823	-	5'-UTR,CDS,intron-Distal	3.09734	6.19730	K562	ZNF622
chr1	156294824	156294881	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.37482	4.75010	HepG2	EIF3D
chr1	156303347	156303400	-	5'-UTR,CDS,intron-Distal	4.14492	11.51553	HepG2	G3BP1
chr1	156304516	156304547	-	5'-UTR,CDS,intron-Distal	3.18936	5.76891	HepG2	GRWD1
chr1	156303336	156303350	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.29367	4.38893	K562	ZNF800
chr1	156304698	156304709	-	5'-UTR,CDS,intron-Distal	4.84278	29.99067	K562	YBX3
chr1	156307946	156307964	-	5'-UTR,CDS,intron-Distal	3.16387	21.42949	K562	DDX3X
chr1	156305636	156305647	-	5'-UTR,CDS,intron-Distal	6.30008	25.83687	K562	YBX3
chr1	156304688	156304698	-	5'-UTR,CDS,intron-Distal	4.88060	29.30391	K562	YBX3
chr1	156305641	156305701	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.87032	11.68584	HepG2	AQR
chr1	156294812	156294872	-	5'-UTR,CDS,intron-Distal	3.28605	14.84802	HepG2	BCLAF1
chr1	156304618	156304717	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.58546	10.86325	HepG2	PRPF8
chr1	156305321	156305375	-	intron-Distal	3.37497	3.56114	HepG2	KHSRP
chr1	156307833	156307895	-	intron-Distal	3.29082	5.80375	HepG2	PTBP1
chr1	156307746	156307798	-	intron-Distal	4.99128	8.54663	K562	PTBP1
chr1	156305520	156305615	-	intron-Distal,intron-Proximal	3.79256	11.23713	K562	AQR
chr1	156288620	156288653	-	intron-Distal,intron-Proximal	4.92935	4.65563	K562	AQR
chr1	156307702	156307787	-	intron-Distal	4.32601	4.07628	HepG2	PTBP1
chr1	156305501	156305580	-	intron-Distal,intron-Proximal	3.79662	4.35650	K562	KHSRP
chr1	156305313	156305363	-	intron-Distal	5.74813	11.96615	K562	KHSRP
chr1	156307898	156307926	-	intron-Distal	5.03796	22.45539	K562	AQR
chr1	156305681	156305732	-	intron-Distal,intron-Proximal	5.73177	19.49957	HepG2	SF3B4
chr1	156304718	156304768	-	intron-Distal,intron-Proximal	5.48950	7.97588	HepG2	SF3B4
chr1	156305515	156305595	-	intron-Distal,intron-Proximal	3.96436	9.14595	K562	PRPF8
chr1	156283214	156283269	-	intron-Distal	3.32809	3.06005	HepG2	QKI
chr1	156305252	156305314	-	intron-Distal	3.70232	14.63425	HepG2	U2AF2
chr1	156305363	156305427	-	intron-Distal	4.51278	17.71260	K562	KHSRP
chr1	156304736	156304810	-	intron-Distal,intron-Proximal	3.53133	4.93958	HepG2	CSTF2
chr1	156286861	156286944	-	intron-Distal,intron-Proximal	3.66936	6.40067	K562	PRPF8
chr1	156305529	156305587	-	intron-Distal,intron-Proximal	4.30374	6.70502	K562	RBM22
chr1	156280696	156280741	-	intron-Distal,intron-Proximal	5.70636	9.41643	K562	AQR
chr1	156305243	156305321	-	intron-Distal	3.19228	4.89227	HepG2	KHSRP
chr1	156307832	156307898	-	intron-Distal	6.44796	32.79017	K562	AQR
chr1	156307824	156307892	-	intron-Distal	4.18785	12.69566	K562	PRPF8
chr1	156285597	156285678	-	intron-Distal	3.80047	5.36861	HepG2	U2AF2
chr1	156280712	156280729	-	intron-Distal,intron-Proximal	4.46939	3.12843	K562	PRPF8
chr1	156305249	156305306	-	intron-Distal	3.58806	6.23972	K562	KHSRP
chr1	156304404	156304481	-	intron-Distal,intron-Proximal	4.84305	4.44893	K562	RBM22
chr1	156305226	156305249	-	intron-Distal	4.23042	3.90026	K562	KHSRP
chr1	156307936	156307945	-	intron-Distal	3.13948	10.48594	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CCT3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CCT3 is not available on ENCORE database.
105 RBPs can affect the levels of CCT3.

The Knockdown/knockout RNA-Seq assay for CCT3 is not available on ENCORE database.

105 RBPs can affect the gene expression of CCT3 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CCT3	ENSG00000163468.10	6920.06640	5967.72220	0.21350	3.78650	3.09640	HepG2	ACO1
CCT3	ENSG00000163468.10	14220.72290	9683.68130	0.55430	5.77310	5.03660	HepG2	AKAP1
CCT3	ENSG00000163468.10	11397.57170	9977.05120	0.19190	2.79630	2.10730	HepG2	AUH
CCT3	ENSG00000163468.10	3775.31750	6278.83750	-0.73390	10.07400	8.49940	HepG2	BCLAF1
CCT3	ENSG00000163468.10	3621.80130	4375.45800	-0.27270	2.49110	1.32430	HepG2	BUD13
CCT3	ENSG00000163468.10	7935.42640	5965.90910	0.41150	14.45610	13.18490	HepG2	CKAP4
CCT3	ENSG00000163468.10	6127.62790	4585.10410	0.41830	2.24410	1.56020	HepG2	CNOT7
CCT3	ENSG00000163468.10	4301.61450	5250.35100	-0.28750	2.43340	1.78270	HepG2	CPSF6
CCT3	ENSG00000163468.10	6244.83110	5305.06670	0.23520	2.97580	1.91970	HepG2	YBX3
CCT3	ENSG00000163468.10	11082.08770	8651.28110	0.35710	7.92980	6.94730	HepG2	CELF1
CCT3	ENSG00000163468.10	7072.33150	9301.18210	-0.39520	11.64700	10.29370	HepG2	DAZAP1
CCT3	ENSG00000163468.10	6259.31580	5519.05080	0.18150	2.84200	1.99730	HepG2	DDX19B
CCT3	ENSG00000163468.10	4456.81080	5312.48550	-0.25340	3.29760	2.03770	HepG2	DDX1
CCT3	ENSG00000163468.10	3634.44960	7968.13970	-1.13250	20.49600	19.02200	HepG2	DDX6
CCT3	ENSG00000163468.10	4191.66450	5209.20180	-0.31350	4.95020	4.03470	HepG2	DNAJC21
CCT3	ENSG00000163468.10	4480.95420	7660.49300	-0.77360	12.08510	10.89990	HepG2	EIF2S1
CCT3	ENSG00000163468.10	11217.90040	9177.10820	0.28960	6.22970	5.06340	HepG2	EIF4G1
CCT3	ENSG00000163468.10	7202.14090	8790.91700	-0.28760	2.18050	1.45120	HepG2	EIF4G2
CCT3	ENSG00000163468.10	6917.80900	5831.07270	0.24650	2.38530	1.61040	HepG2	EWSR1
CCT3	ENSG00000163468.10	2740.94390	3454.29810	-0.33370	4.11500	2.66090	HepG2	FAM120A
CCT3	ENSG00000163468.10	6004.83340	7923.49870	-0.40000	3.36970	2.63930	HepG2	G3BP1
CCT3	ENSG00000163468.10	4396.01060	5682.96280	-0.37040	3.36210	2.23310	HepG2	GNB2L1
CCT3	ENSG00000163468.10	4051.75060	5259.10700	-0.37630	4.43720	3.64380	HepG2	HNRNPA1
CCT3	ENSG00000163468.10	4911.14230	5849.77270	-0.25230	2.25300	1.62060	HepG2	HNRNPC
CCT3	ENSG00000163468.10	6348.60500	8347.70990	-0.39490	9.95670	8.70280	HepG2	HNRNPF
CCT3	ENSG00000163468.10	3055.87650	5679.53900	-0.89420	17.03140	15.66150	HepG2	HNRNPLL
CCT3	ENSG00000163468.10	5983.23830	8220.07040	-0.45820	8.13080	6.94900	HepG2	IGF2BP1
CCT3	ENSG00000163468.10	5415.00920	5935.84660	-0.13250	2.06900	1.42430	HepG2	ILF2
CCT3	ENSG00000163468.10	5736.46760	8100.88670	-0.49790	3.91620	2.70550	HepG2	KHSRP
CCT3	ENSG00000163468.10	4631.31490	5454.92530	-0.23610	4.90840	3.55530	HepG2	KIF1C
CCT3	ENSG00000163468.10	2923.37250	5793.05140	-0.98670	10.89710	8.96160	HepG2	MTPAP
CCT3	ENSG00000163468.10	7122.35580	8794.48340	-0.30420	2.18590	1.62100	HepG2	NCBP2
CCT3	ENSG00000163468.10	7602.96180	9223.09030	-0.27870	3.49640	2.63980	HepG2	NOL12
CCT3	ENSG00000163468.10	4210.09820	5036.21670	-0.25850	2.07560	1.42320	HepG2	NSUN2
CCT3	ENSG00000163468.10	4522.41570	7832.52960	-0.79240	12.13130	10.64910	HepG2	PABPC4
CCT3	ENSG00000163468.10	6768.13210	8132.18010	-0.26490	5.04420	4.26200	HepG2	PCBP1
CCT3	ENSG00000163468.10	2668.91580	3195.99960	-0.26000	2.76720	1.53750	HepG2	PKM
CCT3	ENSG00000163468.10	3116.90490	5183.03750	-0.73370	22.34980	20.40780	HepG2	PPIL4
CCT3	ENSG00000163468.10	6437.32370	5450.48880	0.24000	3.79440	2.90180	HepG2	PRPF4
CCT3	ENSG00000163468.10	6693.35990	8274.68960	-0.30600	6.01790	5.27390	HepG2	PTBP1
CCT3	ENSG00000163468.10	6485.67990	8961.92280	-0.46660	9.93780	8.85700	HepG2	QKI
CCT3	ENSG00000163468.10	5642.44160	8133.43420	-0.52750	9.41600	8.22730	HepG2	RBM25
CCT3	ENSG00000163468.10	7817.84890	9209.02460	-0.23630	4.21840	3.57570	HepG2	NELFE
CCT3	ENSG00000163468.10	6530.67200	8576.79260	-0.39320	10.51830	9.43410	HepG2	RECQL
CCT3	ENSG00000163468.10	7201.55440	8993.13950	-0.32050	3.47840	2.72590	HepG2	RPLP0
CCT3	ENSG00000163468.10	4178.54280	5175.04690	-0.30860	7.04120	6.08070	HepG2	SAFB2
CCT3	ENSG00000163468.10	7718.62590	6148.17820	0.32810	2.00110	1.42560	HepG2	SF3A3
CCT3	ENSG00000163468.10	6593.19840	8615.21310	-0.38590	10.11370	9.08820	HepG2	SF3B4
CCT3	ENSG00000163468.10	6009.25770	8442.89600	-0.49060	8.95120	7.80230	HepG2	SLBP
CCT3	ENSG00000163468.10	12087.22720	10813.83740	0.16050	2.50980	2.02450	HepG2	SRFBP1
CCT3	ENSG00000163468.10	10938.08890	8992.33850	0.28250	6.33640	5.69230	HepG2	SRSF1
CCT3	ENSG00000163468.10	6566.63200	8201.49020	-0.32070	7.14820	6.11170	HepG2	SRSF7
CCT3	ENSG00000163468.10	4682.81870	7315.67840	-0.64360	27.05980	25.66640	HepG2	SRSF9
CCT3	ENSG00000163468.10	8476.91140	9388.83420	-0.14740	2.04860	1.59080	HepG2	SSB
CCT3	ENSG00000163468.10	3401.24620	4991.22170	-0.55330	3.84220	2.41560	HepG2	SUB1
CCT3	ENSG00000163468.10	5192.24110	7072.51480	-0.44590	3.95330	3.16750	HepG2	SUPV3L1
CCT3	ENSG00000163468.10	6646.77910	8082.44570	-0.28210	4.33820	3.66000	HepG2	TAF15
CCT3	ENSG00000163468.10	4110.58550	5536.59240	-0.42970	5.01240	4.07890	HepG2	TARDBP
CCT3	ENSG00000163468.10	4596.51600	7426.89860	-0.69220	16.00340	14.04410	HepG2	TIA1
CCT3	ENSG00000163468.10	4169.74750	5646.61080	-0.43740	7.62190	6.86780	HepG2	TIAL1
CCT3	ENSG00000163468.10	4693.18320	5697.04140	-0.27960	5.18430	4.46150	HepG2	TRIM56
CCT3	ENSG00000163468.10	6613.19820	8602.23190	-0.37940	5.06200	3.84340	HepG2	TUFM
CCT3	ENSG00000163468.10	6125.49860	5044.48110	0.28000	2.33820	1.75620	HepG2	U2AF1
CCT3	ENSG00000163468.10	5292.54910	9105.69920	-0.78280	11.62610	9.86780	HepG2	UBE2L3
CCT3	ENSG00000163468.10	7481.61010	5264.17280	0.50700	17.30140	15.99460	HepG2	UTP3
CCT3	ENSG00000163468.10	11860.88920	14445.57740	-0.28440	2.49320	1.33940	K562	ABCF1
CCT3	ENSG00000163468.10	10986.26890	8406.22540	0.38610	10.43720	9.42630	K562	AGGF1
CCT3	ENSG00000163468.10	10564.07600	8747.02090	0.27220	2.59230	1.95910	K562	AKAP8L
CCT3	ENSG00000163468.10	14660.43910	17233.09080	-0.23330	1.82610	1.32990	K562	AQR
CCT3	ENSG00000163468.10	10258.35950	11992.19390	-0.22530	3.27680	1.82160	K562	BCCIP
CCT3	ENSG00000163468.10	9032.17650	11588.80670	-0.35960	9.80990	7.98390	K562	BCLAF1
CCT3	ENSG00000163468.10	4404.22520	6680.64370	-0.60110	5.28190	4.06510	K562	BOP1
CCT3	ENSG00000163468.10	4126.79720	5480.29430	-0.40920	4.34490	2.96540	K562	CCAR1
CCT3	ENSG00000163468.10	4898.66400	7103.76380	-0.53620	4.34810	3.36610	K562	CPSF6
CCT3	ENSG00000163468.10	7440.42060	8791.83690	-0.24080	3.23490	2.08180	K562	CSTF2
CCT3	ENSG00000163468.10	9969.74960	11682.85790	-0.22880	3.50130	2.13590	K562	DDX21
CCT3	ENSG00000163468.10	16441.57050	13109.71820	0.32660	7.49750	6.49540	K562	DDX47
CCT3	ENSG00000163468.10	11479.49960	9412.65720	0.28630	4.72300	3.52960	K562	DKC1
CCT3	ENSG00000163468.10	10357.40370	14949.04780	-0.52940	15.25810	13.77740	K562	EIF2S2
CCT3	ENSG00000163468.10	9248.25340	6891.45020	0.42430	8.62820	7.22610	K562	EIF3G
CCT3	ENSG00000163468.10	17293.29210	20100.43330	-0.21700	2.98500	2.01060	K562	EIF4G2
CCT3	ENSG00000163468.10	7798.66530	9518.58130	-0.28750	3.17920	1.81300	K562	EXOSC5
CCT3	ENSG00000163468.10	6184.50320	7859.07350	-0.34570	2.89080	1.73640	K562	FKBP4
CCT3	ENSG00000163468.10	4771.90230	7227.28630	-0.59890	5.32780	4.13610	K562	FMR1
CCT3	ENSG00000163468.10	4024.67160	6125.50580	-0.60600	5.32510	4.01200	K562	FTO
CCT3	ENSG00000163468.10	11631.56610	7595.85690	0.61470	20.13050	18.61240	K562	FXR1
CCT3	ENSG00000163468.10	5359.18060	6825.11140	-0.34880	2.16710	1.55240	K562	G3BP2
CCT3	ENSG00000163468.10	8455.85710	10087.13690	-0.25450	3.21060	1.97920	K562	GLRX3
CCT3	ENSG00000163468.10	4554.77860	6782.60440	-0.57450	3.57290	2.67510	K562	GPKOW
CCT3	ENSG00000163468.10	15487.71570	19920.88920	-0.36320	5.12280	4.09140	K562	GRSF1
CCT3	ENSG00000163468.10	4564.51780	9053.79770	-0.98810	30.24390	28.35220	K562	HNRNPC
CCT3	ENSG00000163468.10	6319.20190	8084.69190	-0.35550	3.83720	2.46840	K562	HNRNPF
CCT3	ENSG00000163468.10	11105.89020	8787.66080	0.33770	2.99020	1.70580	K562	HNRNPK
CCT3	ENSG00000163468.10	11054.17950	9282.90730	0.25180	2.49910	1.71880	K562	KIF1C
CCT3	ENSG00000163468.10	3611.78310	5790.82150	-0.68110	4.81220	3.54080	K562	KRR1
CCT3	ENSG00000163468.10	5206.19240	6620.46980	-0.34670	2.32000	1.52070	K562	METAP2
CCT3	ENSG00000163468.10	8453.54380	10605.29520	-0.32720	8.24620	6.91950	K562	MTPAP
CCT3	ENSG00000163468.10	9732.66310	11783.51270	-0.27590	10.52470	9.19690	K562	NSUN2
CCT3	ENSG00000163468.10	8146.07900	12107.62250	-0.57170	7.02450	5.69650	K562	PCBP3
CCT3	ENSG00000163468.10	6945.05180	9287.21740	-0.41930	6.74490	5.50490	K562	POLR2G
CCT3	ENSG00000163468.10	6454.84710	8117.57770	-0.33070	3.53300	2.49260	K562	PSIP1
CCT3	ENSG00000163468.10	11475.27410	8984.63370	0.35290	4.72670	3.88100	K562	PTBP1
CCT3	ENSG00000163468.10	18302.41640	22856.25710	-0.32060	5.91190	4.49310	K562	PUM2
CCT3	ENSG00000163468.10	12681.18150	8674.91470	0.54770	7.99270	7.11670	K562	PUS1
CCT3	ENSG00000163468.10	10807.19440	8452.17370	0.35450	6.23160	5.36720	K562	RBM15
CCT3	ENSG00000163468.10	6072.90610	7405.75400	-0.28630	3.39290	2.29600	K562	RCC2
CCT3	ENSG00000163468.10	10016.14700	11627.20480	-0.21520	3.11340	2.24850	K562	SF3A3
CCT3	ENSG00000163468.10	4297.09540	6449.55720	-0.58580	5.42160	4.02690	K562	SF3B1
CCT3	ENSG00000163468.10	5556.94190	7020.50690	-0.33730	3.54440	2.34430	K562	SRFBP1
CCT3	ENSG00000163468.10	10078.41100	11912.31200	-0.24120	5.98980	4.67780	K562	SRPK2
CCT3	ENSG00000163468.10	11154.96590	8808.13180	0.34070	4.52440	3.62390	K562	SRSF1
CCT3	ENSG00000163468.10	9131.73790	10425.63750	-0.19120	2.41100	1.32210	K562	SRSF7
CCT3	ENSG00000163468.10	6148.06910	9100.35020	-0.56580	6.40950	4.81650	K562	SUPV3L1
CCT3	ENSG00000163468.10	11301.69150	9314.96430	0.27880	3.49230	2.57040	K562	SYNCRIP
CCT3	ENSG00000163468.10	6118.84600	7807.81080	-0.35170	3.03540	2.05130	K562	TIAL1
CCT3	ENSG00000163468.10	18912.92850	24725.85670	-0.38660	5.18680	3.28830	K562	UBE2L3
CCT3	ENSG00000163468.10	7102.90780	9631.36410	-0.43930	4.78150	3.40290	K562	UCHL5
CCT3	ENSG00000163468.10	8964.18060	12494.30230	-0.47900	16.72600	15.12990	K562	UPF1
CCT3	ENSG00000163468.10	8134.24600	10690.98980	-0.39430	5.62840	4.36060	K562	WDR3
CCT3	ENSG00000163468.10	7524.80510	9807.04900	-0.38220	3.66230	2.20000	K562	XRN2
CCT3	ENSG00000163468.10	14424.86090	19414.70400	-0.42860	5.85580	4.52700	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CCT3 is not available on ENCORE database.

8 RBPs can affect the splicing of CCT3 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CCT3	ENSG00000163468.10	chr1	-	156304503	156304566			156303337	156303434	156304658	156304709	-0.06200	0.00000	0.00000	excluded	K562	PRPF8
SE	CCT3	ENSG00000163468.10	chr1	-	156304658	156304699			156303337	156303434	156305617	156305715	0.38200	0.00092	0.01142	included	K562	AQR
SE	CCT3	ENSG00000163468.10	chr1	-	156307467	156307580			156304658	156304709	156307944	156308048	-0.58700	0.00036	0.00516	excluded	K562	AQR
SE	CCT3	ENSG00000163468.10	chr1	-	156304503	156304566			156303337	156303434	156304658	156304709	-0.12700	0.00000	0.00000	excluded	K562	AQR
SE	CCT3	ENSG00000163468.10	chr1	-	156304658	156304699			156303337	156303434	156305617	156305679	-0.48900	0.00073	0.01321	excluded	K562	PUS1
SE	CCT3	ENSG00000163468.10	chr1	-	156304658	156304699			156303337	156303434	156305617	156305679	0.70900	0.00012	0.02583	included	K562	UPF1
SE	CCT3	ENSG00000163468.10	chr1	-	156306869	156307031			156305617	156305679	156307944	156308038	0.28500	0.00000	0.00000	included	K562	HNRNPC
A3SS	CCT3	ENSG00000163468.10	chr1	-	156305617	156305715			156305617	156305679	156307944	156308102	0.05700	0.00000	0.00000	longer	K562	AQR
A3SS	CCT3	ENSG00000163468.10	chr1	-	156305617	156305809			156305617	156305715	156307944	156308102	-0.74700	0.00000	0.00000	shorter	K562	AQR
A5SS	CCT3	ENSG00000163468.10	chr1	-	156304503	156304699			156304658	156304699	156303337	156303434	-0.23100	0.00000	0.00000	shorter	K562	AQR
A5SS	CCT3	ENSG00000163468.10	chr1	-	156304503	156304699			156304658	156304699	156303337	156303434	-0.11100	0.00000	0.00000	shorter	K562	PRPF8
A5SS	CCT3	ENSG00000163468.10	chr1	-	156304503	156304699			156304658	156304699	156303337	156303434	-0.06300	0.00000	0.00000	shorter	K562	EFTUD2
MXE	CCT3	ENSG00000163468.10	chr1	-	156303337	156303434	156305617	156305715	156294762	156294880	156307944	156308102	0.07100	0.00000	0.00000	1included	K562	AQR
MXE	CCT3	ENSG00000163468.10	chr1	-	156303337	156303450	156305617	156305715	156294762	156294880	156307944	156308102	0.07300	0.00000	0.00000	1included	K562	AQR
MXE	CCT3	ENSG00000163468.10	chr1	-	156304658	156304699	156305617	156305750	156304503	156304566	156307944	156308102	0.05300	0.00000	0.00004	1included	K562	AQR
MXE	CCT3	ENSG00000163468.10	chr1	-	156304658	156304699	156305617	156305715	156304503	156304566	156307944	156308102	0.29000	0.00000	0.00000	1included	K562	AQR
MXE	CCT3	ENSG00000163468.10	chr1	-	156304503	156304699	156305617	156305715	156303337	156303434	156307944	156308102	0.06600	0.00000	0.00000	1included	K562	AQR
MXE	CCT3	ENSG00000163468.10	chr1	-	156304503	156304566	156304658	156304699	156303337	156303434	156305617	156305679	0.08100	0.00000	0.00000	1included	K562	AQR
MXE	CCT3	ENSG00000163468.10	chr1	-	156304503	156304566	156304658	156304709	156303337	156303434	156305617	156305679	0.09200	0.00053	0.00523	1included	K562	AQR
MXE	CCT3	ENSG00000163468.10	chr1	-	156304658	156304699	156305617	156305809	156303337	156303434	156307944	156308102	-0.57300	0.00002	0.00029	2included	K562	AQR
MXE	CCT3	ENSG00000163468.10	chr1	-	156304658	156304699	156305617	156305750	156303337	156303434	156307944	156308102	-0.56300	0.00003	0.00035	2included	K562	AQR
MXE	CCT3	ENSG00000163468.10	chr1	-	156304658	156304699	156305617	156305734	156303337	156303434	156307944	156308102	-0.58500	0.00001	0.00016	2included	K562	AQR
MXE	CCT3	ENSG00000163468.10	chr1	-	156304658	156304709	156305617	156305715	156303337	156303434	156307467	156307580	-0.55700	0.00000	0.00000	2included	K562	AQR
MXE	CCT3	ENSG00000163468.10	chr1	-	156304503	156304566	156304658	156304709	156303337	156303434	156305617	156305679	-0.12200	0.00000	0.00004	2included	K562	DHX30
MXE	CCT3	ENSG00000163468.10	chr1	-	156304503	156304566	156304658	156304709	156303337	156303434	156305617	156305679	0.08000	0.00002	0.00145	1included	K562	HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CCT3

General Information

Functions

Localization

Domains (AlphaFold: CCT3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CCT3 is not avaliable on ENCORE database.

36 proteins are bound to CCT3 RNA:

eCLIP assay for CCT3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CCT3 is not available on ENCORE database.

105 RBPs can affect the gene expression of CCT3 :

The Knockdown/knockout RNA-Seq assay for CCT3 is not available on ENCORE database.

8 RBPs can affect the splicing of CCT3 :

The Knockdown/knockout RNA-Seq assay for CCT3 is not avaliable on ENCORE database.