GRPEL1

General Information

Gene Name       : GRPEL1
Gene ID             : ENSG00000109519.12
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: GRPEL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GRPEL1ENSG00000109519.1237.3649.3643.36ENCSR000AEF
HepG2GRPEL1ENSG00000109519.1272.2487.7880.01ENCSR985KAT
K562GRPEL1ENSG00000109519.1263.0659.6361.34ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GRPEL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GRPEL1 RNA is bound by 10 proteins.  







eCLIP assay for GRPEL1 is not avaliable on ENCORE database.





10 proteins are bound to GRPEL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr470620127062115-3'-UTR,intron-Distal4.878666.29854K562UPF1
chr470623247062383-3'-UTR,intron-Distal,intron-Proximal4.760007.31669K562FAM120A
chr470623047062411-3'-UTR,intron-Distal,intron-Proximal3.791185.40760HepG2UPF1
chr470621987062266-3'-UTR,intron-Distal,intron-Proximal3.723685.35486K562UPF1
chr470621887062270-3'-UTR,intron-Distal,intron-Proximal5.183977.94456HepG2UPF1
chr470621887062264-3'-UTR,intron-Distal,intron-Proximal3.846675.33418K562FAM120A
chr470697207069798-5'-UTR,CDS,intron-Distal,intron-Proximal3.865445.44096K562DDX3X
chr470697087069794-5'-UTR,CDS,intron-Distal,intron-Proximal5.446184.57565HepG2DDX3X
chr470658707065989-CDS,intron-Distal,intron-Proximal3.059897.46666HepG2BUD13
chr470627197062847-CDS,intron-Distal,intron-Proximal3.246737.47194HepG2GRWD1
chr470696047069700-CDS,intron-Distal3.624754.40430HepG2AQR
chr470658997065951-CDS,intron-Distal,intron-Proximal3.145153.38111K562DDX3X
chr470628477062935-CDS,intron-Distal,intron-Proximal3.478246.39282HepG2GRWD1
chr470657407065791-CDS,intron-Distal,intron-Proximal4.527314.13847K562AQR
chr470627657062856-CDS,intron-Distal,intron-Proximal3.485904.20387K562ZNF622
chr470696397069712-CDS,intron-Distal4.7245114.13178HepG2PRPF8
chr470691817069227-intron-Distal3.810364.90166K562DGCR8
chr470696027069684-intron-Distal3.589656.90374HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GRPEL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GRPEL1 is not available on ENCORE database.

  • 99 RBPs can affect the levels of GRPEL1.  








The Knockdown/knockout RNA-Seq assay for GRPEL1 is not available on ENCORE database.





99 RBPs can affect the gene expression of GRPEL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GRPEL1ENSG00000109519.8873.377601269.93240-0.540108.921707.64340HepG2AKAP8L
GRPEL1ENSG00000109519.81624.073601301.083000.319802.582802.00200HepG2BOP1
GRPEL1ENSG00000109519.81049.808701263.74060-0.267603.133902.43540HepG2CKAP4
GRPEL1ENSG00000109519.8729.304201194.50370-0.711805.473504.53690HepG2CPSF6
GRPEL1ENSG00000109519.8957.042501209.23300-0.337403.727902.96440HepG2DKC1
GRPEL1ENSG00000109519.8659.28750977.52690-0.568207.671106.54690HepG2DNAJC21
GRPEL1ENSG00000109519.8751.39690968.82820-0.366704.648103.83910HepG2DNAJC2
GRPEL1ENSG00000109519.8720.84700924.35230-0.358702.130801.32180HepG2EEF2
GRPEL1ENSG00000109519.8948.673701395.97970-0.557305.022004.23580HepG2EIF2S1
GRPEL1ENSG00000109519.8786.929601001.87760-0.348402.905501.70700HepG2EIF2S2
GRPEL1ENSG00000109519.81268.284301742.03890-0.457906.461905.27720HepG2EIF4G1
GRPEL1ENSG00000109519.8548.555601941.80720-1.8237087.4048084.93330HepG2ETF1
GRPEL1ENSG00000109519.8997.286301333.64380-0.419302.667701.91100HepG2FIP1L1
GRPEL1ENSG00000109519.81110.620801651.97510-0.572804.963102.75170HepG2FMR1
GRPEL1ENSG00000109519.8729.39650921.00650-0.336502.483401.73780HepG2FUBP3
GRPEL1ENSG00000109519.8861.848001443.92010-0.744507.993406.89460HepG2G3BP1
GRPEL1ENSG00000109519.81130.119401532.90320-0.439803.612002.58680HepG2G3BP2
GRPEL1ENSG00000109519.81023.771501206.72930-0.237202.229801.34620HepG2HDGF
GRPEL1ENSG00000109519.8576.71500986.89110-0.775009.588308.49280HepG2HNRNPA1
GRPEL1ENSG00000109519.8699.047301097.71170-0.651007.274206.19210HepG2HNRNPC
GRPEL1ENSG00000109519.81030.060401254.20300-0.284002.814502.09050HepG2HNRNPF
GRPEL1ENSG00000109519.81084.899801462.09450-0.430503.707702.90760HepG2HNRNPK
GRPEL1ENSG00000109519.8763.065101292.29870-0.760106.379205.46820HepG2HNRNPLL
GRPEL1ENSG00000109519.8627.157601090.45600-0.7980016.6955015.30300HepG2HNRNPU
GRPEL1ENSG00000109519.8433.665701467.71400-1.7589038.8573036.65940HepG2IGF2BP2
GRPEL1ENSG00000109519.8788.111801113.86850-0.499108.862007.62190HepG2ILF2
GRPEL1ENSG00000109519.8675.75580919.12140-0.443802.614601.46550HepG2KHDRBS1
GRPEL1ENSG00000109519.81209.256401557.08200-0.364702.471601.85120HepG2MAGOH
GRPEL1ENSG00000109519.8823.887201317.74540-0.677604.656503.37940HepG2MTPAP
GRPEL1ENSG00000109519.81268.725401602.68140-0.337102.197401.63100HepG2NCBP2
GRPEL1ENSG00000109519.81199.895401750.83130-0.545108.327807.02700HepG2NOL12
GRPEL1ENSG00000109519.81258.98760881.523300.514102.484501.65270HepG2PABPC1
GRPEL1ENSG00000109519.81150.272401427.29490-0.311301.918101.30790HepG2PABPC4
GRPEL1ENSG00000109519.8880.260601079.39250-0.294202.877602.01460HepG2PARN
GRPEL1ENSG00000109519.8443.10270620.55260-0.485904.010702.52120HepG2PKM
GRPEL1ENSG00000109519.81282.95510864.898400.568803.200701.56500HepG2PNPT1
GRPEL1ENSG00000109519.8661.10650972.60350-0.557007.373806.21260HepG2PPIL4
GRPEL1ENSG00000109519.8530.60140861.52330-0.699306.305505.13890HepG2PRPF8
GRPEL1ENSG00000109519.8999.340501499.44450-0.585408.973308.10060HepG2PTBP1
GRPEL1ENSG00000109519.81221.322301774.25860-0.5388012.9143011.83070HepG2PUM1
GRPEL1ENSG00000109519.81413.504901772.93760-0.326903.191702.47140HepG2PUM2
GRPEL1ENSG00000109519.8910.545501287.37270-0.499608.690507.70010HepG2PUS1
GRPEL1ENSG00000109519.81135.412501624.11970-0.516406.598805.69430HepG2QKI
GRPEL1ENSG00000109519.81502.021201036.715800.534802.692001.99580HepG2RAVER1
GRPEL1ENSG00000109519.81076.111801473.92340-0.453805.127304.23560HepG2RBM25
GRPEL1ENSG00000109519.81071.774601668.80960-0.638808.564707.70980HepG2NELFE
GRPEL1ENSG00000109519.81001.773701554.13910-0.633608.713607.71160HepG2RECQL
GRPEL1ENSG00000109519.81678.206801351.033000.312802.557701.89700HepG2RPLP0
GRPEL1ENSG00000109519.8627.98110852.22180-0.440502.670901.89650HepG2RRP9
GRPEL1ENSG00000109519.8764.296301598.94470-1.064903.531301.95530HepG2SF1
GRPEL1ENSG00000109519.81713.223601245.528800.459903.136802.41900HepG2SF3A3
GRPEL1ENSG00000109519.81054.579301561.27030-0.566108.177807.24410HepG2SF3B4
GRPEL1ENSG00000109519.81311.719301602.65270-0.289003.778702.97900HepG2SLBP
GRPEL1ENSG00000109519.8557.798101011.52640-0.858703.927002.03770HepG2SLTM
GRPEL1ENSG00000109519.8890.739701132.50310-0.346404.681003.88090HepG2SMN1
GRPEL1ENSG00000109519.81271.950801833.11560-0.5273011.1868010.36230HepG2SRFBP1
GRPEL1ENSG00000109519.81381.083301629.56490-0.238702.308501.86610HepG2SRSF1
GRPEL1ENSG00000109519.8874.055401376.23000-0.654905.057703.66530HepG2SRSF3
GRPEL1ENSG00000109519.81288.675001650.26900-0.356804.778703.99340HepG2SRSF5
GRPEL1ENSG00000109519.82174.382101591.585300.450008.993308.17140HepG2SSB
GRPEL1ENSG00000109519.81492.990201876.76920-0.330004.884504.09970HepG2SUCLG1
GRPEL1ENSG00000109519.8786.285701171.42590-0.575103.991102.38810HepG2SUGP2
GRPEL1ENSG00000109519.8659.54930900.50360-0.449303.492902.44600HepG2SUPT6H
GRPEL1ENSG00000109519.8420.598701111.79160-1.4024021.2249019.66560HepG2SUPV3L1
GRPEL1ENSG00000109519.8974.004501464.54090-0.588409.594908.65250HepG2TAF15
GRPEL1ENSG00000109519.8825.425601259.31050-0.609403.651802.83410HepG2TARDBP
GRPEL1ENSG00000109519.8894.780501345.89990-0.589008.180806.75370HepG2TIA1
GRPEL1ENSG00000109519.8835.056201140.82130-0.450103.521402.81770HepG2U2AF1
GRPEL1ENSG00000109519.8902.916901662.32570-0.880502.615001.65800HepG2U2AF2
GRPEL1ENSG00000109519.81283.217101728.45270-0.429703.071202.19130HepG2UBE2L3
GRPEL1ENSG00000109519.8863.738401135.37540-0.394504.564603.25910HepG2UTP18
GRPEL1ENSG00000109519.81412.172701066.442400.405005.790304.97630HepG2UTP3
GRPEL1ENSG00000109519.8584.55470875.53700-0.582808.954207.86240HepG2ZC3H8
GRPEL1ENSG00000109519.81705.031401214.841900.4889010.9804010.06900HepG2ZNF622
GRPEL1ENSG00000109519.8979.19930683.671100.518204.835503.22040K562AARS
GRPEL1ENSG00000109519.8831.448101017.42520-0.291202.701901.75270K562BCLAF1
GRPEL1ENSG00000109519.8635.646301023.06770-0.686607.082105.66700K562BOP1
GRPEL1ENSG00000109519.8909.924001522.56570-0.742703.145602.00280K562CNOT7
GRPEL1ENSG00000109519.8722.579101087.83020-0.590207.095005.83160K562CPSF6
GRPEL1ENSG00000109519.8427.66290557.94650-0.383702.570801.56690K562DDX3X
GRPEL1ENSG00000109519.81647.036001394.280000.240302.601101.96700K562DDX47
GRPEL1ENSG00000109519.81039.48500782.455900.409704.352103.21930K562DKC1
GRPEL1ENSG00000109519.8635.64570864.92350-0.444303.205802.21800K562EFTUD2
GRPEL1ENSG00000109519.81032.581401575.00610-0.6091011.244609.93990K562EIF2S2
GRPEL1ENSG00000109519.81101.11470730.267600.592407.771806.44070K562EIF3G
GRPEL1ENSG00000109519.81040.548101316.28520-0.339102.591201.77120K562FIP1L1
GRPEL1ENSG00000109519.8565.026801106.81100-0.9700014.1238012.12670K562FMR1
GRPEL1ENSG00000109519.8493.61870938.10890-0.9264011.185609.22620K562FTO
GRPEL1ENSG00000109519.81387.40990606.179001.1945033.2418031.27770K562FXR1
GRPEL1ENSG00000109519.8618.988601038.62270-0.746709.240307.78080K562GPKOW
GRPEL1ENSG00000109519.8413.84650748.19050-0.8543010.183009.09510K562HNRNPC
GRPEL1ENSG00000109519.8505.96990668.08350-0.401002.598001.49570K562HNRNPF
GRPEL1ENSG00000109519.81372.436401082.682600.342002.148301.33360K562HNRNPM
GRPEL1ENSG00000109519.81457.849201784.57620-0.291702.124001.42350K562HSPD1
GRPEL1ENSG00000109519.8315.74520752.50420-1.2529014.9006012.07480K562IGF2BP2
GRPEL1ENSG00000109519.8577.99200886.82130-0.617604.132602.97040K562KRR1
GRPEL1ENSG00000109519.81045.10410789.167400.405103.684402.60700K562MATR3
GRPEL1ENSG00000109519.8689.332201013.80640-0.556505.689104.40480K562METAP2
GRPEL1ENSG00000109519.8790.684201079.42980-0.449105.893304.74530K562MTPAP
GRPEL1ENSG00000109519.8839.451801199.34540-0.514709.615408.33550K562NSUN2
GRPEL1ENSG00000109519.8748.602401044.03650-0.479903.554302.61220K562PCBP3
GRPEL1ENSG00000109519.8496.68540670.81680-0.433603.009602.06010K562PSIP1
GRPEL1ENSG00000109519.81072.13790768.299800.480605.127804.24670K562PTBP1
GRPEL1ENSG00000109519.8499.72940721.13960-0.529103.729203.11240K562PUS1
GRPEL1ENSG00000109519.81135.53750857.353900.405302.588301.79970K562RPS19
GRPEL1ENSG00000109519.8691.36670987.72120-0.514703.768002.62450K562SF3B1
GRPEL1ENSG00000109519.8772.44110600.803200.362402.978802.09030K562SF3B4
GRPEL1ENSG00000109519.8436.18690580.13300-0.411402.446101.49660K562SRFBP1
GRPEL1ENSG00000109519.81036.87810753.197800.461004.400403.51330K562SRSF1
GRPEL1ENSG00000109519.8538.77440711.35800-0.400902.733301.69240K562SRSF5
GRPEL1ENSG00000109519.8555.89310753.26780-0.438404.301802.65930K562SSB
GRPEL1ENSG00000109519.8438.04740814.95160-0.895609.105107.20530K562SUPV3L1
GRPEL1ENSG00000109519.81124.35530803.224700.485105.456204.29540K562SYNCRIP
GRPEL1ENSG00000109519.8427.02290645.22200-0.595504.294603.10980K562TIAL1
GRPEL1ENSG00000109519.8522.64740862.50910-0.722707.117405.40130K562UCHL5
GRPEL1ENSG00000109519.8865.545601271.69120-0.555109.884408.63270K562UPF1
GRPEL1ENSG00000109519.8747.202601134.53770-0.602505.394203.72180K562UTP3
GRPEL1ENSG00000109519.8703.241001088.14620-0.629807.870806.34770K562WDR3
GRPEL1ENSG00000109519.81331.747301939.24580-0.542204.829803.64260K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GRPEL1 is not available on ENCORE database.





1 RBPs can affect the splicing of GRPEL1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEGRPEL1ENSG00000109519.8chr4-70683547068500706916670693987065787706595070696977069791-0.778000.012660.076662includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GRPEL1 is not avaliable on ENCORE database.