FAM46A

General Information

Gene Name       : FAM46A
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM46A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM46A is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM46A RNA is bound by 1 proteins.  







eCLIP assay for FAM46A is not avaliable on ENCORE database.





1 proteins are bound to FAM46A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr68246211382462169-5'-UTR,intron-Distal4.323763.56873HepG2PRPF8
chr68246203782462101-CDS,intron-Distal3.616564.83899HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM46A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM46A is not available on ENCORE database.

  • 130 RBPs can affect the levels of FAM46A.  








The Knockdown/knockout RNA-Seq assay for FAM46A is not available on ENCORE database.





130 RBPs can affect the gene expression of FAM46A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM46AENSG00000112773.11997.58750510.251200.9671013.9090011.79040HepG2AATF
FAM46AENSG00000112773.112220.64080479.033802.21270148.49760145.86800HepG2ACO1
FAM46AENSG00000112773.11524.81850814.91430-0.634805.858304.47950HepG2ADAR
FAM46AENSG00000112773.111638.18640339.619102.2700050.8019048.96310HepG2AKAP1
FAM46AENSG00000112773.11439.82750280.999800.646304.075403.13060HepG2ASCC1
FAM46AENSG00000112773.111156.30660881.179300.391903.183402.54680HepG2BOP1
FAM46AENSG00000112773.11683.61840457.345300.579805.664603.94660HepG2BUD13
FAM46AENSG00000112773.111182.18310959.765100.300602.262401.56010HepG2CALR
FAM46AENSG00000112773.11845.801001499.85270-0.826403.134402.09130HepG2CCAR1
FAM46AENSG00000112773.11689.52730266.971301.3688014.5038012.89220HepG2CIRBP
FAM46AENSG00000112773.11396.10430808.98210-1.0302012.6817011.33030HepG2CPSF6
FAM46AENSG00000112773.11841.37370502.732000.742909.358407.45940HepG2CPSF7
FAM46AENSG00000112773.11597.53690835.64970-0.483904.114902.86940HepG2YBX3
FAM46AENSG00000112773.11790.49190522.265800.597903.734002.06220HepG2CSTF2T
FAM46AENSG00000112773.112067.271001004.572401.0410033.7125031.97470HepG2CELF1
FAM46AENSG00000112773.11459.258901080.14450-1.2338037.7633035.65430HepG2DAZAP1
FAM46AENSG00000112773.11331.00990550.96190-0.735107.163405.70350HepG2DDX24
FAM46AENSG00000112773.11270.90580693.98440-1.3571012.7721010.32130HepG2DDX27
FAM46AENSG00000112773.111260.70050741.589300.765408.086506.84500HepG2DDX55
FAM46AENSG00000112773.111369.20870918.654800.575602.867501.87140HepG2DDX59
FAM46AENSG00000112773.11351.31740579.21170-0.721306.377304.90250HepG2DDX5
FAM46AENSG00000112773.111038.72010279.485601.8939033.4568031.65430HepG2DDX6
FAM46AENSG00000112773.11394.79530791.47350-1.0034010.908809.12250HepG2DHX30
FAM46AENSG00000112773.11207.20620820.63830-1.9857028.2683026.29470HepG2DNAJC21
FAM46AENSG00000112773.11624.62780813.25680-0.380703.094402.41110HepG2DNAJC2
FAM46AENSG00000112773.11503.66060660.71500-0.391602.189301.36770HepG2EEF2
FAM46AENSG00000112773.11714.80420518.494800.463102.511701.46310HepG2AGO1
FAM46AENSG00000112773.11491.56130268.643700.871606.941606.03150HepG2EIF2S1
FAM46AENSG00000112773.11656.21280463.046700.502904.511203.03420HepG2EIF2S2
FAM46AENSG00000112773.111051.99210536.368500.9717012.0034010.26660HepG2EIF3D
FAM46AENSG00000112773.11440.72580296.867100.570003.125202.44670HepG2EIF4A3
FAM46AENSG00000112773.111390.64110289.071802.2662040.9934038.56670HepG2EIF4B
FAM46AENSG00000112773.11801.211201065.64390-0.411503.519502.59310HepG2EIF4G1
FAM46AENSG00000112773.11354.467801020.81600-1.5260029.4839027.12300HepG2EIF4G2
FAM46AENSG00000112773.11999.55270468.103701.0944013.1953011.43370HepG2EWSR1
FAM46AENSG00000112773.11772.85500479.350300.689008.374206.31910HepG2FAM120A
FAM46AENSG00000112773.112242.79360616.169701.8638043.7485041.43710HepG2FIP1L1
FAM46AENSG00000112773.11725.630701010.55230-0.477803.270801.46490HepG2FMR1
FAM46AENSG00000112773.11231.58090165.541700.484202.010001.33150HepG2FUBP3
FAM46AENSG00000112773.113448.48410788.218602.1292044.4899041.15430HepG2FUS
FAM46AENSG00000112773.111701.45540299.574102.5057028.9158026.97950HepG2FXR1
FAM46AENSG00000112773.11422.64390277.873900.604903.568402.81650HepG2G3BP1
FAM46AENSG00000112773.11456.94390295.031500.631004.043302.95870HepG2G3BP2
FAM46AENSG00000112773.11456.45920917.07560-1.0066011.2790010.05460HepG2GPKOW
FAM46AENSG00000112773.11460.96980828.49870-0.845804.328703.54420HepG2HNRNPA1
FAM46AENSG00000112773.111590.62650992.692200.6801014.5775012.78100HepG2HNRNPA2B1
FAM46AENSG00000112773.11426.49670921.50690-1.1115014.0437012.59670HepG2HNRNPC
FAM46AENSG00000112773.11329.96880695.10390-1.0749010.110107.39280HepG2HNRNPD
FAM46AENSG00000112773.11688.369101101.30380-0.6780011.6320010.29840HepG2HNRNPF
FAM46AENSG00000112773.111014.55870281.431001.8499038.6600036.36230HepG2HNRNPK
FAM46AENSG00000112773.111271.42180983.923700.369705.567704.64030HepG2HNRNPL
FAM46AENSG00000112773.11455.13470875.17930-0.9433011.008109.85560HepG2HNRNPLL
FAM46AENSG00000112773.111107.18630425.272601.3803028.4506026.05530HepG2HNRNPM
FAM46AENSG00000112773.11396.54360915.41770-1.2070014.5987013.29850HepG2HNRNPU
FAM46AENSG00000112773.11620.410701084.47880-0.8057012.2564010.84190HepG2IGF2BP1
FAM46AENSG00000112773.11584.11840282.443801.0482010.701409.46820HepG2IGF2BP2
FAM46AENSG00000112773.111699.00590265.097202.680009.967208.20060HepG2IGF2BP3
FAM46AENSG00000112773.11414.86020782.29680-0.915107.290705.07570HepG2ILF3
FAM46AENSG00000112773.11425.75980764.36280-0.844207.378205.34230HepG2KHDRBS1
FAM46AENSG00000112773.11524.89620284.106900.885506.277304.70650HepG2KHSRP
FAM46AENSG00000112773.11705.70530521.143500.437303.471401.65140HepG2CCAR2
FAM46AENSG00000112773.111489.69100576.646601.3692031.8171028.53100HepG2LARP7
FAM46AENSG00000112773.11681.12130299.678901.1844013.7981012.37810HepG2MAGOH
FAM46AENSG00000112773.11736.84630488.477200.593005.254703.08660HepG2MARK2
FAM46AENSG00000112773.11774.52590301.348401.3618016.8195015.36620HepG2MATR3
FAM46AENSG00000112773.111460.41740561.368801.3793015.5407013.23840HepG2METAP2
FAM46AENSG00000112773.11919.96850498.912900.8827012.7816011.17310HepG2MSI2
FAM46AENSG00000112773.11598.49620418.885200.514704.467502.92660HepG2NAA15
FAM46AENSG00000112773.11638.13200308.440601.0488010.547509.35080HepG2NCBP2
FAM46AENSG00000112773.111391.315501071.070000.377304.160703.22510HepG2NOL12
FAM46AENSG00000112773.11409.04250775.99110-0.9238010.393009.01880HepG2NSUN2
FAM46AENSG00000112773.11447.27190733.39110-0.713403.868302.80640HepG2PABPC1
FAM46AENSG00000112773.112070.25030906.162901.1919042.3795039.86530HepG2PARN
FAM46AENSG00000112773.11845.77340284.888101.5698041.9493040.09590HepG2PCBP1
FAM46AENSG00000112773.11441.41980719.59990-0.705003.934002.11580HepG2PNPT1
FAM46AENSG00000112773.11364.09240508.08530-0.480804.160403.23250HepG2PRPF4
FAM46AENSG00000112773.111421.31790289.894802.2935056.9964055.22340HepG2PTBP1
FAM46AENSG00000112773.11485.825201022.43490-1.0735017.9690016.63100HepG2PUF60
FAM46AENSG00000112773.112112.311001085.365400.9605041.2490039.50980HepG2PUM1
FAM46AENSG00000112773.11897.487501084.56910-0.273202.028901.44840HepG2PUM2
FAM46AENSG00000112773.11913.43080487.927400.9045019.0404017.68480HepG2PUS1
FAM46AENSG00000112773.113046.84790720.107202.0809031.3787029.28500HepG2RAVER1
FAM46AENSG00000112773.111659.12870723.096301.1981035.7778034.32600HepG2RBM22
FAM46AENSG00000112773.11655.96830284.930001.2029015.2754013.75950HepG2RBM25
FAM46AENSG00000112773.11870.87300695.316700.324702.191801.31890HepG2RBM27
FAM46AENSG00000112773.11597.16900322.616400.8882011.3638010.40990HepG2NELFE
FAM46AENSG00000112773.11639.01690300.489201.0884017.5555016.21960HepG2RECQL
FAM46AENSG00000112773.11453.75570707.30790-0.640403.731002.63500HepG2RPS10
FAM46AENSG00000112773.11721.50570521.897500.467103.787303.07850HepG2RPS19
FAM46AENSG00000112773.11454.18690805.53760-0.826706.662505.42900HepG2RPS3A
FAM46AENSG00000112773.111207.58960566.139401.0928014.8707013.30460HepG2RRP9
FAM46AENSG00000112773.11283.68430815.24640-1.5230019.2269017.74750HepG2SAFB2
FAM46AENSG00000112773.11473.98030758.56220-0.678405.111003.32450HepG2SART3
FAM46AENSG00000112773.11403.78690765.39940-0.922606.629404.34710HepG2SBDS
FAM46AENSG00000112773.11368.27950523.82560-0.508303.194002.18090HepG2SERBP1
FAM46AENSG00000112773.111013.04090587.502300.785906.665905.59070HepG2SF3A3
FAM46AENSG00000112773.11558.84680866.27280-0.632406.055805.04550HepG2SF3B1
FAM46AENSG00000112773.11887.81270301.799101.5566039.7167037.97350HepG2SF3B4
FAM46AENSG00000112773.11482.29360980.36720-1.0234024.8463023.15380HepG2SLBP
FAM46AENSG00000112773.111602.28260950.759600.7529020.8988019.38150HepG2SMN1
FAM46AENSG00000112773.111301.96760963.873900.433702.158901.47210HepG2SNRNP70
FAM46AENSG00000112773.111172.81770816.712800.522008.374707.63240HepG2SRFBP1
FAM46AENSG00000112773.111016.01730706.399800.524304.036802.12360HepG2SRP68
FAM46AENSG00000112773.11959.49240315.020601.6067044.5099043.11450HepG2SRSF1
FAM46AENSG00000112773.11881.298701081.96380-0.295902.674701.99060HepG2SRSF7
FAM46AENSG00000112773.11606.88840256.292701.2435023.9923022.66550HepG2SRSF9
FAM46AENSG00000112773.11544.11040709.10390-0.382103.555002.99020HepG2SSB
FAM46AENSG00000112773.11233.59850411.76690-0.817804.802003.21600HepG2STAU1
FAM46AENSG00000112773.111171.09760672.948900.799206.051104.29050HepG2SUB1
FAM46AENSG00000112773.11276.87850416.26070-0.588202.552701.64830HepG2SUPT6H
FAM46AENSG00000112773.11984.59120494.898000.9923012.3284010.53450HepG2TFIP11
FAM46AENSG00000112773.11468.62720260.175800.848906.051004.82080HepG2TIA1
FAM46AENSG00000112773.11374.83470889.66740-1.2470015.0301014.02950HepG2TIAL1
FAM46AENSG00000112773.111274.82760723.011500.818104.880802.95640HepG2TRA2A
FAM46AENSG00000112773.11621.68400897.44000-0.529604.175603.51080HepG2TRIM56
FAM46AENSG00000112773.112296.22010527.221502.1227034.6712032.38510HepG2U2AF1
FAM46AENSG00000112773.11427.24030676.22750-0.662503.407502.28720HepG2UPF2
FAM46AENSG00000112773.11702.91260535.548000.392203.470802.31180HepG2UTP18
FAM46AENSG00000112773.11273.66870721.50550-1.3986016.0022013.48210HepG2XPO5
FAM46AENSG00000112773.111431.16200708.064301.015109.780307.52930HepG2XRCC5
FAM46AENSG00000112773.11302.93960726.77750-1.2625013.4407011.86010HepG2XRN2
FAM46AENSG00000112773.11885.36850573.027800.627607.714706.92040HepG2ZNF622
FAM46AENSG00000112773.11211.20760135.404300.641302.663601.47190K562ABCF1
FAM46AENSG00000112773.11119.6924076.125400.652802.219701.70190K562AGGF1
FAM46AENSG00000112773.11326.70670133.379301.2924010.277909.25670K562AQR
FAM46AENSG00000112773.11201.0814098.679301.026905.026803.83640K562BOP1
FAM46AENSG00000112773.11233.91210118.371000.982606.183504.31770K562CIRBP
FAM46AENSG00000112773.11146.2163089.316100.711002.960401.44020K562DDX19B
FAM46AENSG00000112773.11136.6592086.205800.664602.427901.65790K562EIF4A3
FAM46AENSG00000112773.1178.66870131.96420-0.746302.555201.78750K562HSPD1
FAM46AENSG00000112773.11142.6265066.004001.111504.330403.15200K562NAA15
FAM46AENSG00000112773.11262.76270165.403000.667703.633901.90310K562NOL12
FAM46AENSG00000112773.11140.6942064.421101.126904.661203.68900K562PRPF8
FAM46AENSG00000112773.11335.43720165.016601.023307.937906.54790K562PUF60
FAM46AENSG00000112773.11196.31230108.129200.860304.673303.54560K562RBM22
FAM46AENSG00000112773.11171.6060095.276000.848803.249702.19330K562SF3B1
FAM46AENSG00000112773.11154.1763088.386200.802603.657602.73130K562U2AF2
FAM46AENSG00000112773.11198.96170102.847800.951904.858903.26400K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM46A is not available on ENCORE database.






No RBPs affect the alternative splcing events of FAM46A on ENCORE database.





The Knockdown/knockout RNA-Seq assay for FAM46A is not avaliable on ENCORE database.