CCBL2

General Information

Gene Name       : CCBL2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CCBL2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CCBL2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CCBL2 RNA is bound by 14 proteins.  







eCLIP assay for CCBL2 is not avaliable on ENCORE database.





14 proteins are bound to CCBL2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr18942773189427757-3'-UTR,CDS,intron-Distal,intron-Proximal3.274864.74886HepG2BCLAF1
chr18942083389420896-3'-UTR,CDS,intron-Distal4.347413.79199HepG2PPIG
chr18940164689401744-3'-UTR,intron-Distal3.589925.73766K562YBX3
chr18940176589401877-3'-UTR,CDS,intron-Distal3.223023.09370K562NOLC1
chr18941870489418760-3'-UTR,CDS,intron-Distal,intron-Proximal3.093953.94281K562PRPF8
chr18942086289420919-3'-UTR,CDS,intron-Distal,intron-Proximal4.117047.81467HepG2U2AF2
chr18941864089418780-3'-UTR,CDS,intron-Distal,intron-Proximal6.133948.72621HepG2PRPF8
chr18940176389401849-3'-UTR,intron-Distal5.7574413.18422HepG2SUB1
chr18940156889401617-3'-UTR,intron-Distal5.218446.73016HepG2SUB1
chr18940179589401815-3'-UTR,intron-Distal3.450113.68471HepG2BCLAF1
chr18941490489414973-3'-UTR,CDS,intron-Distal,intron-Proximal3.359094.18806HepG2U2AF2
chr18945826489458328-5'-UTR,intron-Distal,intron-Proximal3.649438.16459K562DDX3X
chr18945826489458312-5'-UTR,intron-Distal,intron-Proximal3.020693.90007HepG2NCBP2
chr18943050689430538-CDS,intron-Distal,intron-Proximal5.250268.41647HepG2BCLAF1
chr18945825089458268-intron-Distal,intron-Proximal3.695075.73990HepG2PRPF8
chr18941814589418215-intron-Distal3.774003.27714HepG2HNRNPL
chr18941800689418079-intron-Distal3.918553.71677HepG2HNRNPL
chr18941512689415197-intron-Distal4.724993.35169HepG2U2AF2
chr18942994889430058-intron-Distal3.810663.84494HepG2QKI
chr18942880789428984-intron-Distal4.106123.28841HepG2PTBP1
chr18944517989445267-3'-UTR,intron-Distal4.3628711.22023K562PUM2
chr18944603789446085-3'-UTR,intron-Distal5.176666.79809K562PABPC4
chr18945822289458250-intron-Distal,intron-Proximal3.788006.34662HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CCBL2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CCBL2 is not available on ENCORE database.

  • 85 RBPs can affect the levels of CCBL2.  








The Knockdown/knockout RNA-Seq assay for CCBL2 is not available on ENCORE database.





85 RBPs can affect the gene expression of CCBL2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CCBL2ENSG00000137944.12529.42200409.932000.368902.911902.29080HepG2ACO1
CCBL2ENSG00000137944.12581.09500784.31970-0.432702.782201.99580HepG2ASCC1
CCBL2ENSG00000137944.12520.06230351.656900.564404.593203.62940HepG2CALR
CCBL2ENSG00000137944.12314.90160409.80950-0.380102.591201.94310HepG2CKAP4
CCBL2ENSG00000137944.12438.81250600.95540-0.453704.178103.41920HepG2CELF1
CCBL2ENSG00000137944.12438.88660646.27070-0.558307.155106.04240HepG2DAZAP1
CCBL2ENSG00000137944.12397.39340248.865600.675102.819801.83260HepG2DDX59
CCBL2ENSG00000137944.12540.26280780.03410-0.529903.477602.79230HepG2DDX6
CCBL2ENSG00000137944.12246.40570348.24070-0.499003.691402.95740HepG2DNAJC2
CCBL2ENSG00000137944.12527.03110749.84520-0.508703.516002.85180HepG2EIF2S1
CCBL2ENSG00000137944.12211.14670312.29610-0.564703.460802.15100HepG2EIF2S2
CCBL2ENSG00000137944.12567.90340828.65720-0.545103.750903.01110HepG2EIF4A3
CCBL2ENSG00000137944.12513.41550818.88350-0.673509.556608.54910HepG2ETF1
CCBL2ENSG00000137944.12501.94680836.11040-0.736206.877205.81670HepG2FXR1
CCBL2ENSG00000137944.12478.64690775.59920-0.696305.865804.91220HepG2G3BP1
CCBL2ENSG00000137944.12257.22080444.70250-0.789802.590801.60750HepG2GNB2L1
CCBL2ENSG00000137944.12260.73620354.68490-0.443902.250401.66380HepG2HNRNPA1
CCBL2ENSG00000137944.12738.38430593.894900.314102.368501.49540HepG2HNRNPA2B1
CCBL2ENSG00000137944.12362.79100785.40130-1.1143014.5234013.04690HepG2HNRNPK
CCBL2ENSG00000137944.12351.43990237.072500.567802.898502.25620HepG2HNRNPLL
CCBL2ENSG00000137944.12225.12170391.92040-0.799907.947806.96040HepG2HNRNPU
CCBL2ENSG00000137944.12586.10270788.37400-0.427702.727502.05600HepG2IGF2BP2
CCBL2ENSG00000137944.12595.39960836.40240-0.490303.378902.65320HepG2MAGOH
CCBL2ENSG00000137944.12441.05090841.07880-0.931309.233908.13600HepG2MATR3
CCBL2ENSG00000137944.12507.86880860.88690-0.761406.926805.94560HepG2NCBP2
CCBL2ENSG00000137944.12518.03240766.65770-0.565504.204103.32550HepG2PABPC4
CCBL2ENSG00000137944.12252.20760343.54450-0.445902.609201.85610HepG2PRPF4
CCBL2ENSG00000137944.12416.15520708.78500-0.7682010.9992010.04880HepG2PTBP1
CCBL2ENSG00000137944.12355.78860611.70690-0.781808.207407.25360HepG2PUF60
CCBL2ENSG00000137944.12528.56310649.32270-0.296902.687302.10110HepG2PUM1
CCBL2ENSG00000137944.12678.07350404.291100.745903.093502.35080HepG2RAVER1
CCBL2ENSG00000137944.12677.13580436.068700.634806.557805.30870HepG2RBM15
CCBL2ENSG00000137944.12520.15590684.44060-0.396003.150002.60640HepG2RBM22
CCBL2ENSG00000137944.12955.56210696.650900.455804.215403.39810HepG2RBM25
CCBL2ENSG00000137944.12603.86480788.79190-0.385403.374002.78900HepG2NELFE
CCBL2ENSG00000137944.12176.54140283.16850-0.681704.069303.33870HepG2RPS19
CCBL2ENSG00000137944.12389.04210234.650800.729304.943404.02250HepG2SF3B1
CCBL2ENSG00000137944.12445.48970261.091600.770703.973503.02880HepG2SNRNP70
CCBL2ENSG00000137944.12445.29910603.93410-0.439604.173603.43290HepG2SRSF5
CCBL2ENSG00000137944.12170.34480336.05070-0.980209.110507.97560HepG2SRSF7
CCBL2ENSG00000137944.12832.55760636.128100.388103.323102.41130HepG2TIA1
CCBL2ENSG00000137944.12257.87940380.79390-0.562303.906403.33380HepG2TIAL1
CCBL2ENSG00000137944.12473.38100632.47510-0.418002.215601.47130HepG2UBE2L3
CCBL2ENSG00000137944.12452.78480339.011300.417403.245802.52870HepG2ZC3H8
CCBL2ENSG00000137944.12542.17000800.95390-0.563004.686503.07090K562ABCF1
CCBL2ENSG00000137944.121017.901401270.77290-0.320102.591501.39170K562APOBEC3C
CCBL2ENSG00000137944.12545.643301378.49520-1.3371025.5034023.91610K562AQR
CCBL2ENSG00000137944.121094.05060859.647100.347803.538202.49380K562ATP5C1
CCBL2ENSG00000137944.12549.58760732.44650-0.414403.868902.72100K562BCLAF1
CCBL2ENSG00000137944.12269.90830427.47910-0.663404.361003.25820K562BOP1
CCBL2ENSG00000137944.12391.53040557.95140-0.511003.037601.53870K562BUD13
CCBL2ENSG00000137944.12183.46720288.86970-0.654903.779702.50910K562CCAR1
CCBL2ENSG00000137944.12342.64400454.53380-0.407702.286701.56680K562CPSF6
CCBL2ENSG00000137944.12403.09240555.66960-0.463103.437202.23820K562CSTF2
CCBL2ENSG00000137944.121184.930101770.99270-0.579808.986907.27340K562CELF1
CCBL2ENSG00000137944.12431.26810574.29000-0.413202.925501.67840K562DDX21
CCBL2ENSG00000137944.121102.93510881.582300.323103.280802.31710K562DKC1
CCBL2ENSG00000137944.12293.64060576.23570-0.972609.841008.01900K562EFTUD2
CCBL2ENSG00000137944.12563.92950724.21630-0.360902.975602.23420K562EIF2S2
CCBL2ENSG00000137944.12427.46180617.07740-0.529702.983101.90560K562EIF3D
CCBL2ENSG00000137944.12540.20870770.92440-0.513104.397203.36230K562EIF4A3
CCBL2ENSG00000137944.121119.167001440.19150-0.363804.390303.21860K562EIF4G2
CCBL2ENSG00000137944.12535.45820801.72620-0.582307.095006.18710K562FXR1
CCBL2ENSG00000137944.121175.28970793.978000.565702.548001.87460K562G3BP2
CCBL2ENSG00000137944.12282.23500433.96860-0.620704.364603.37310K562GPKOW
CCBL2ENSG00000137944.12766.41590965.13490-0.332602.372101.67080K562GRSF1
CCBL2ENSG00000137944.12577.96410948.74610-0.715009.491407.63180K562HNRNPA1
CCBL2ENSG00000137944.12171.56200614.02190-1.8396031.7260029.77590K562HNRNPC
CCBL2ENSG00000137944.12402.80310548.27390-0.444802.798401.64910K562HNRNPF
CCBL2ENSG00000137944.12689.80200952.46770-0.465503.483602.08050K562HNRNPK
CCBL2ENSG00000137944.12477.75370832.59340-0.8013010.320908.17090K562HNRNPL
CCBL2ENSG00000137944.12570.483401050.64710-0.8810016.2189014.16460K562HNRNPU
CCBL2ENSG00000137944.121142.89140869.455000.394403.145902.26220K562KIF1C
CCBL2ENSG00000137944.12218.13060370.55320-0.764504.110702.95310K562KRR1
CCBL2ENSG00000137944.12704.326101000.16860-0.505905.316003.98140K562MATR3
CCBL2ENSG00000137944.121255.29650974.012000.365903.291002.28380K562MBNL1
CCBL2ENSG00000137944.12279.70950423.60150-0.598804.202303.10780K562METAP2
CCBL2ENSG00000137944.12524.74800690.08250-0.395103.671002.74960K562MTPAP
CCBL2ENSG00000137944.12952.41090682.713700.480202.730801.85530K562NAA15
CCBL2ENSG00000137944.12570.58070766.72950-0.426304.950003.99160K562NSUN2
CCBL2ENSG00000137944.12577.04180891.72810-0.627906.540005.02020K562PCBP2
CCBL2ENSG00000137944.12275.69780973.62260-1.8203036.0683033.76600K562PTBP1
CCBL2ENSG00000137944.12751.380701571.33540-1.0644019.9931017.71630K562PUF60
CCBL2ENSG00000137944.121385.636601637.59710-0.241002.352701.46590K562PUM2
CCBL2ENSG00000137944.121073.99990812.473100.402503.047702.48220K562PUS1
CCBL2ENSG00000137944.121122.22700791.666900.503306.336705.46530K562RBM15
CCBL2ENSG00000137944.12680.09760915.17510-0.428303.493301.68090K562RBM17
CCBL2ENSG00000137944.12640.60490933.78200-0.543705.181003.98970K562RBM22
CCBL2ENSG00000137944.12226.16360356.29020-0.655704.180202.83940K562SAFB
CCBL2ENSG00000137944.12276.23020412.71700-0.579303.078702.05160K562SF3B1
CCBL2ENSG00000137944.12380.49070685.05720-0.848403.900302.24310K562SFPQ
CCBL2ENSG00000137944.12607.04200775.14200-0.352703.344502.32640K562SRPK2
CCBL2ENSG00000137944.12587.26220954.43490-0.700608.749807.50070K562SRSF1
CCBL2ENSG00000137944.12315.65690434.81840-0.462102.590501.57850K562SRSF4
CCBL2ENSG00000137944.12282.96000512.44730-0.8568010.119007.85910K562SRSF7
CCBL2ENSG00000137944.12362.30100543.05280-0.583903.558402.39170K562SUPV3L1
CCBL2ENSG00000137944.12711.25290966.03640-0.441703.417102.62710K562TARDBP
CCBL2ENSG00000137944.12339.87770529.51750-0.639704.432203.22790K562TIAL1
CCBL2ENSG00000137944.12424.71720562.47130-0.405302.431901.55480K562TRIM56
CCBL2ENSG00000137944.12568.51700812.98070-0.516006.347305.31190K562UPF1
CCBL2ENSG00000137944.121133.344301552.82040-0.454304.603803.44830K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CCBL2 is not available on ENCORE database.





11 RBPs can affect the splicing of CCBL2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECCBL2ENSG00000137944.12chr1-894090328940910689408687894087748941477389414960-0.065000.006640.09171excludedK562SF3B4
SECCBL2ENSG00000137944.12chr1-8945393489454034894350918943515089458267894586040.396000.000110.01821includedK562FMR1
SECCBL2ENSG00000137944.12chr1-894268498942697089420831894209088942706389427189-0.125000.002860.06215excludedHepG2HNRNPK
SECCBL2ENSG00000137944.12chr1-8945393489454034894350918943515089458267894586040.393000.000160.04454includedK562METAP2
SECCBL2ENSG00000137944.12chr1-894268498942697089420831894209088942706389427189-0.173000.000000.00002excludedK562AQR
SECCBL2ENSG00000137944.12chr1-894090328940910689408687894087748941477389414960-0.066000.000280.00419excludedK562AQR
SECCBL2ENSG00000137944.12chr1-894302388943039589428614894287708943051189430661-0.649000.002200.03252excludedK562PUS1
SECCBL2ENSG00000137944.12chr1-894539348945403489435091894351508945826789458431-0.293000.003870.05100excludedK562PUS1
SECCBL2ENSG00000137944.12chr1-8941537289415542894147738941496089418745894188350.168000.000000.00000includedK562HNRNPL
SECCBL2ENSG00000137944.12chr1-894268498942697089420831894209088942706389427189-0.165000.000580.01634excludedHepG2SRSF1
SECCBL2ENSG00000137944.12chr1-894090328940910689408687894087748941477389414960-0.151000.000000.00012excludedK562U2AF2
SECCBL2ENSG00000137944.12chr1-8945393489454034894350918943515089458267894586040.376000.000340.04189includedK562CPSF6
SECCBL2ENSG00000137944.12chr1-8945393489454034894350918943515089458267894584310.380000.000250.00598includedK562HNRNPC
A3SSCCBL2ENSG00000137944.12chr1-8942706389427258894270638942718989427741894278280.101000.000850.03274longerK562U2AF2
A3SSCCBL2ENSG00000137944.12chr1-8943051189430731894305118943066189434352894345150.056000.000070.00062longerK562AQR
A3SSCCBL2ENSG00000137944.12chr1-8942706389427258894270638942718989427741894278280.059000.001000.00694longerK562AQR
MXECCBL2ENSG00000137944.12chr1-89409032894091068941477389415014894086878940877489418745894188350.090000.000180.002021includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CCBL2 is not avaliable on ENCORE database.