MTRR

General Information

Gene Name : MTRR
Gene ID : ENSG00000124275.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MTRR)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MTRR	ENSG00000124275.14	44.32	37.70	41.01	ENCSR000AEF
HepG2	MTRR	ENSG00000124275.14	32.48	41.44	36.96	ENCSR985KAT
K562	MTRR	ENSG00000124275.14	46.93	56.90	51.91	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MTRR is not avaliable on ENCORE database.

Proteins bound to RNA

MTRR RNA is bound by 16 proteins.

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eCLIP assay for MTRR is not avaliable on ENCORE database.

16 proteins are bound to MTRR RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr5	7885965	7886038	+	3'-UTR,CDS,intron-Proximal	4.99743	14.41880	K562	AQR
chr5	7883674	7883777	+	intron-Distal	5.76552	12.91978	K562	TARDBP
chr5	7883454	7883543	+	intron-Distal,intron-Proximal	5.40868	10.78698	K562	TARDBP
chr5	7893145	7893280	+	intron-Distal	5.19518	8.94695	K562	KHSRP
chr5	7878433	7878491	+	3'-UTR,5'-UTR,CDS,intron-Proximal	5.25389	7.28294	K562	AQR
chr5	7885943	7886046	+	3'-UTR,CDS,intron-Proximal	3.64530	6.86197	HepG2	PRPF8
chr5	7900361	7900499	+	3'-UTR	3.84538	6.21080	HepG2	PCBP2
chr5	7887539	7887637	+	intron-Distal	3.35740	5.96041	K562	KHSRP
chr5	7885976	7886046	+	intron-Proximal	4.91896	5.47635	HepG2	RBM22
chr5	7878208	7878336	+	3'-UTR,5'-UTR,CDS	3.72058	5.30520	K562	UCHL5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 33 entries

eCLIP assay for MTRR is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MTRR is not available on ENCORE database.
78 RBPs can affect the levels of MTRR.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MTRR is not available on ENCORE database.

78 RBPs can affect the gene expression of MTRR :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MTRR	ENSG00000124275.10	235.89550	831.74690	-1.81800	31.04200	29.20360	HepG2	EIF2S1
MTRR	ENSG00000124275.10	681.54060	1162.37060	-0.77020	16.24550	15.29620	HepG2	SRFBP1
MTRR	ENSG00000124275.10	1126.12090	648.06190	0.79710	14.88640	13.59500	K562	FXR1
MTRR	ENSG00000124275.10	1556.91830	1009.23190	0.62530	13.69650	12.73040	HepG2	SSB
MTRR	ENSG00000124275.10	309.73460	655.69880	-1.08200	10.34000	9.16870	HepG2	SUPV3L1
MTRR	ENSG00000124275.10	1389.56560	918.89980	0.59660	10.40510	8.98020	HepG2	EIF4G1
MTRR	ENSG00000124275.10	1074.94750	623.16050	0.78650	10.53450	8.91020	K562	EIF4A3
MTRR	ENSG00000124275.10	619.01250	931.44430	-0.58950	9.95550	8.68760	HepG2	DAZAP1
MTRR	ENSG00000124275.10	553.19280	848.48410	-0.61710	9.81250	8.61950	HepG2	HNRNPL
MTRR	ENSG00000124275.10	458.94900	850.44100	-0.88990	9.51110	8.19020	HepG2	PABPC4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 90 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MTRR is not available on ENCORE database.

26 RBPs can affect the splicing of MTRR :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MTRR	ENSG00000124275.10	chr5	+	7895846	7895965	7892839	7893026	7896976	7897069	-0.09500	0.00000	0.00002	excluded	K562	AQR
SE	MTRR	ENSG00000124275.10	chr5	+	7886727	7886816	7885813	7885967	7889207	7889388	-0.26200	0.00000	0.00000	excluded	K562	AQR
SE	MTRR	ENSG00000124275.10	chr5	+	7873485	7873639	7870882	7871036	7875370	7875423	-0.32200	0.00000	0.00000	excluded	K562	AQR
SE	MTRR	ENSG00000124275.10	chr5	+	7873485	7873639	7870882	7871036	7875370	7875423	-0.33900	0.00000	0.00000	excluded	K562	PUS1
SE	MTRR	ENSG00000124275.10	chr5	+	7873485	7873639	7870882	7871036	7875370	7875423	-0.20300	0.00000	0.00001	excluded	K562	U2AF1
SE	MTRR	ENSG00000124275.10	chr5	+	7873485	7873639	7870882	7871036	7875370	7875423	-0.23200	0.00000	0.00025	excluded	K562	UTP18
SE	MTRR	ENSG00000124275.10	chr5	+	7873485	7873639	7870882	7871036	7875370	7875423	-0.43900	0.00000	0.00000	excluded	K562	HNRNPC
A5SS	MTRR	ENSG00000124275.10	chr5	+	7885897	7886124	7885897	7885967	7886727	7886816	0.18100	0.00000	0.00000	longer	K562	AQR
SE	MTRR	ENSG00000124275.10	chr5	+	7883836	7883976	7883267	7883390	7885813	7885967	-0.10500	0.00001	0.00561	excluded	K562	SBDS
SE	MTRR	ENSG00000124275.10	chr5	+	7890389	7890525	7889207	7889388	7891484	7891527	0.08600	0.00002	0.00419	included	K562	FMR1

Showing 1 to 10 of 40 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MTRR

General Information

Functions

Localization

Domains (AlphaFold: MTRR)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MTRR is not avaliable on ENCORE database.

16 proteins are bound to MTRR RNA:

eCLIP assay for MTRR is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MTRR is not available on ENCORE database.

78 RBPs can affect the gene expression of MTRR :

The Knockdown/knockout RNA-Seq assay for MTRR is not available on ENCORE database.

26 RBPs can affect the splicing of MTRR :

The Knockdown/knockout RNA-Seq assay for MTRR is not avaliable on ENCORE database.