MTRR

General Information

Gene Name       : MTRR
Gene ID             : ENSG00000124275.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MTRR)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MTRRENSG00000124275.1444.3237.7041.01ENCSR000AEF
HepG2MTRRENSG00000124275.1432.4841.4436.96ENCSR985KAT
K562MTRRENSG00000124275.1446.9356.9051.91ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MTRR is not avaliable on ENCORE database.



Proteins bound to RNA
  • MTRR RNA is bound by 16 proteins.  







eCLIP assay for MTRR is not avaliable on ENCORE database.





16 proteins are bound to MTRR RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr578832587883314+3'-UTR,5'-UTR,CDS,intron-Proximal3.450604.87883K562BUD13
chr578781567878238+3'-UTR,5'-UTR,CDS3.199873.39477K562BUD13
chr578781217878318+3'-UTR,5'-UTR,CDS3.178515.18023HepG2GRWD1
chr578708827871020+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.185964.75208K562DDX3X
chr579003617900499+3'-UTR3.845386.21080HepG2PCBP2
chr578780567878154+3'-UTR,5'-UTR,CDS,intron-Proximal3.413635.15500HepG2BCLAF1
chr578781397878221+3'-UTR,5'-UTR,CDS3.028703.25772K562ZNF622
chr578928387892944+3'-UTR,CDS,intron-Proximal3.377614.24070HepG2GRWD1
chr578754517875500+3'-UTR,5'-UTR,CDS,intron-Proximal3.275873.91614K562BUD13
chr578782087878336+3'-UTR,5'-UTR,CDS3.720585.30520K562UCHL5
chr578784337878491+3'-UTR,5'-UTR,CDS,intron-Proximal5.253897.28294K562AQR
chr578783007878372+3'-UTR,5'-UTR,CDS4.412383.48187K562RBM15
chr578780367878119+3'-UTR,5'-UTR,CDS,intron-Proximal3.347745.12722K562BUD13
chr578928757892967+3'-UTR,CDS3.552064.22563K562UCHL5
chr578859437886046+3'-UTR,CDS,intron-Proximal3.645306.86197HepG2PRPF8
chr578754017875486+3'-UTR,5'-UTR,CDS3.206114.56058HepG2BCLAF1
chr578857947885875+3'-UTR,CDS,intron-Proximal4.110414.90467K562U2AF2
chr578859657886038+3'-UTR,CDS,intron-Proximal4.9974314.41880K562AQR
chr578781547878275+3'-UTR,5'-UTR,CDS3.877104.51739HepG2BCLAF1
chr578692947869365+5'-UTR,CDS,intron-Distal,intron-Proximal4.075903.84644HepG2NCBP2
chr578709857871039+CDS,intron-Distal,intron-Proximal3.650844.51739HepG2BCLAF1
chr578836747883777+intron-Distal5.7655212.91978K562TARDBP
chr578931457893280+intron-Distal5.195188.94695K562KHSRP
chr578875397887637+intron-Distal3.357405.96041K562KHSRP
chr578834597883509+intron-Distal,intron-Proximal4.525693.72755K562EIF4G2
chr578883547888414+intron-Distal3.078263.06355HepG2KHSRP
chr578838177883875+intron-Distal4.466594.45977HepG2U2AF2
chr578834547883543+intron-Distal,intron-Proximal5.4086810.78698K562TARDBP
chr578930427893137+intron-Distal,intron-Proximal3.127143.18246K562PRPF8
chr578949087894996+intron-Distal3.066614.05586HepG2U2AF2
chr578930267893074+intron-Proximal3.853344.49024K562AQR
chr578973607897427+intron-Proximal3.885413.52230K562AQR
chr578859767886046+intron-Proximal4.918965.47635HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MTRR is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MTRR is not available on ENCORE database.

  • 78 RBPs can affect the levels of MTRR.  








The Knockdown/knockout RNA-Seq assay for MTRR is not available on ENCORE database.





78 RBPs can affect the gene expression of MTRR :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MTRRENSG00000124275.10773.602401051.39760-0.442602.683202.15910HepG2AKAP1
MTRRENSG00000124275.10898.566701072.44160-0.255202.234401.60520HepG2AUH
MTRRENSG00000124275.101186.65340857.387300.468804.201603.48180HepG2BOP1
MTRRENSG00000124275.10897.54170674.311800.412505.172504.31510HepG2CKAP4
MTRRENSG00000124275.10529.39490787.10430-0.572204.780703.89790HepG2CPSF6
MTRRENSG00000124275.10619.01250931.44430-0.589509.955508.68760HepG2DAZAP1
MTRRENSG00000124275.10672.091101007.20080-0.583604.855404.04540HepG2DDX3X
MTRRENSG00000124275.10474.21190658.66410-0.474002.531201.78710HepG2DDX55
MTRRENSG00000124275.10598.67930865.10870-0.531103.501802.81410HepG2DDX6
MTRRENSG00000124275.10931.79900687.940400.437603.664002.54240HepG2DHX30
MTRRENSG00000124275.10894.84370645.288900.471605.500604.60420HepG2DKC1
MTRRENSG00000124275.10598.17610706.98480-0.241101.941401.37730HepG2DNAJC2
MTRRENSG00000124275.10235.89550831.74690-1.8180031.0420029.20360HepG2EIF2S1
MTRRENSG00000124275.101288.11960919.225000.486703.592302.86590HepG2EIF4A3
MTRRENSG00000124275.101389.56560918.899800.5966010.405108.98020HepG2EIF4G1
MTRRENSG00000124275.10494.59640659.06830-0.414202.979202.11500HepG2EWSR1
MTRRENSG00000124275.10546.43040822.01390-0.589103.605202.33100HepG2FUS
MTRRENSG00000124275.10628.89790927.31760-0.560204.536703.66610HepG2FXR1
MTRRENSG00000124275.10651.23700860.29770-0.401702.402301.77980HepG2G3BP1
MTRRENSG00000124275.10482.21370637.06760-0.401802.251601.33690HepG2GNB2L1
MTRRENSG00000124275.10793.46670643.922200.301202.710801.74080HepG2HDGF
MTRRENSG00000124275.10606.88770800.97450-0.400302.751002.05960HepG2HNRNPC
MTRRENSG00000124275.10553.19280848.48410-0.617109.812508.61950HepG2HNRNPL
MTRRENSG00000124275.10570.60460795.67830-0.479705.651904.81050HepG2HNRNPU
MTRRENSG00000124275.10668.00240812.75740-0.283002.820502.08220HepG2ILF2
MTRRENSG00000124275.10451.55460879.54830-0.961907.376105.65280HepG2KHSRP
MTRRENSG00000124275.101274.36960927.640700.458003.519202.77890HepG2MAGOH
MTRRENSG00000124275.10631.11180817.57580-0.373502.454201.69090HepG2MSI2
MTRRENSG00000124275.10714.10610954.84840-0.419102.642002.02140HepG2NCBP2
MTRRENSG00000124275.101102.14280755.001700.545705.060104.06150HepG2NSUN2
MTRRENSG00000124275.10458.94900850.44100-0.889909.511108.19020HepG2PABPC4
MTRRENSG00000124275.101099.66970829.019500.407505.004803.99570HepG2PRPF4
MTRRENSG00000124275.101214.73220881.664100.462204.486903.74820HepG2PUF60
MTRRENSG00000124275.10660.19440935.23780-0.502405.282204.36970HepG2PUM2
MTRRENSG00000124275.10566.56450686.99830-0.278102.181501.61920HepG2PUS1
MTRRENSG00000124275.10855.515301029.12590-0.266601.974401.51720HepG2RBM22
MTRRENSG00000124275.10611.63870917.45710-0.585007.893407.06340HepG2NELFE
MTRRENSG00000124275.10665.36080483.411900.460803.175302.16650HepG2SERBP1
MTRRENSG00000124275.101087.26020842.708100.367502.650101.96030HepG2SF3B1
MTRRENSG00000124275.10688.69500858.32050-0.317702.878102.27720HepG2SF3B4
MTRRENSG00000124275.10651.03550826.31610-0.344003.687202.96280HepG2SMN1
MTRRENSG00000124275.10681.540601162.37060-0.7702016.2455015.29620HepG2SRFBP1
MTRRENSG00000124275.10534.88720728.82280-0.446304.929804.23210HepG2SRSF9
MTRRENSG00000124275.101556.918301009.231900.6253013.6965012.73040HepG2SSB
MTRRENSG00000124275.10369.53160550.75910-0.575703.471202.22580HepG2STIP1
MTRRENSG00000124275.10309.73460655.69880-1.0820010.340009.16870HepG2SUPV3L1
MTRRENSG00000124275.10552.90240805.18230-0.542306.359505.56930HepG2TAF15
MTRRENSG00000124275.101016.79350773.115000.395203.771503.20700HepG2TIAL1
MTRRENSG00000124275.10518.30980754.02130-0.540802.893401.39460HepG2TRA2A
MTRRENSG00000124275.10629.94860911.69490-0.533303.820702.83120HepG2UBE2L3
MTRRENSG00000124275.10767.16570928.53730-0.275401.984701.37710HepG2UPF1
MTRRENSG00000124275.10406.73230600.44240-0.561902.475601.52960HepG2UPF2
MTRRENSG00000124275.10519.96550738.43900-0.506102.626701.40280HepG2XRCC5
MTRRENSG00000124275.10560.02200825.83220-0.560403.306102.14440HepG2XRCC6
MTRRENSG00000124275.101248.273501021.220100.289503.133702.56310HepG2ZNF622
MTRRENSG00000124275.10967.884101200.78950-0.311102.270901.67700K562AKAP8L
MTRRENSG00000124275.10665.15700957.23420-0.525207.255805.67630K562BCLAF1
MTRRENSG00000124275.10964.892701274.89640-0.401903.058802.13920K562BOP1
MTRRENSG00000124275.101054.872201355.52660-0.361803.408602.53530K562CPSF6
MTRRENSG00000124275.101128.756301344.16460-0.252002.470701.32970K562DDX21
MTRRENSG00000124275.10454.54930596.46000-0.392002.675601.64970K562DDX3X
MTRRENSG00000124275.10468.98670655.17880-0.482304.828403.20940K562EIF2S1
MTRRENSG00000124275.101128.732401530.04520-0.438906.190505.17760K562EIF2S2
MTRRENSG00000124275.10951.82930736.826900.369303.419302.54100K562EIF3G
MTRRENSG00000124275.101074.94750623.160500.7865010.534508.91020K562EIF4A3
MTRRENSG00000124275.101202.437201765.74250-0.554306.339705.02180K562FIP1L1
MTRRENSG00000124275.10887.035301169.14430-0.398402.899501.96340K562FTO
MTRRENSG00000124275.101126.12090648.061900.7971014.8864013.59500K562FXR1
MTRRENSG00000124275.101031.71470718.370100.522103.397002.59880K562G3BP2
MTRRENSG00000124275.10962.614601294.15100-0.427003.882302.94870K562GPKOW
MTRRENSG00000124275.101313.196401062.791000.305102.127001.59510K562HNRNPC
MTRRENSG00000124275.101261.95560846.113500.576605.397903.61970K562HNRNPK
MTRRENSG00000124275.10896.086601088.84690-0.281102.309501.49170K562HNRNPU
MTRRENSG00000124275.101969.346302394.08300-0.281802.217901.50290K562HSPD1
MTRRENSG00000124275.101275.96590890.342500.519104.744303.63700K562MAGOH
MTRRENSG00000124275.10797.64250622.253600.358102.778101.54620K562NCBP2
MTRRENSG00000124275.101087.747401418.48400-0.383006.650005.56070K562NSUN2
MTRRENSG00000124275.101544.640902004.35270-0.375903.311502.39980K562PPIG
MTRRENSG00000124275.101042.73460843.706900.305501.990601.34810K562PRPF8
MTRRENSG00000124275.10734.48780952.85460-0.375502.163201.37260K562PSIP1
MTRRENSG00000124275.101154.54870865.024700.416404.139903.34370K562PTBP1
MTRRENSG00000124275.101230.03820918.978700.420503.859102.57140K562SAFB
MTRRENSG00000124275.101697.867601095.694100.631802.537601.38120K562SNRNP200
MTRRENSG00000124275.10935.241201199.62430-0.359204.215002.74960K562SRSF7
MTRRENSG00000124275.101574.579501034.457200.606009.243207.73650K562SYNCRIP
MTRRENSG00000124275.10611.15440812.39810-0.410602.963701.82590K562TRA2A
MTRRENSG00000124275.101025.29830696.638200.557504.464603.00950K562U2AF1
MTRRENSG00000124275.10561.35290864.70190-0.623305.070503.64830K562UCHL5
MTRRENSG00000124275.10835.601101286.97070-0.623106.391005.02750K562WDR3
MTRRENSG00000124275.101293.378801730.87930-0.420403.369902.40400K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MTRR is not available on ENCORE database.





26 RBPs can affect the splicing of MTRR :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMTRRENSG00000124275.10chr5+7873485787363978708827871036787537078754230.279000.000190.02308includedHepG2G3BP1
SEMTRRENSG00000124275.10chr5+7873485787363978708827871036787537078754230.178000.004850.07409includedK562SRSF1
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.162000.004030.06386excludedHepG2U2AF1
SEMTRRENSG00000124275.10chr5+7890389789052578892077889388789148478915270.086000.000020.00419includedK562FMR1
SEMTRRENSG00000124275.10chr5+7873485787363978708827871036787537078754230.265000.000270.00907includedHepG2HNRNPK
SEMTRRENSG00000124275.10chr5+789148478915277889207788938878928397892876-0.058000.008490.07995excludedHepG2U2AF2
SEMTRRENSG00000124275.10chr5+7873485787363978708827871036787537078754230.256000.000360.02835includedHepG2AKAP1
SEMTRRENSG00000124275.10chr5+7890389789052578892077889388789148478915270.080000.000430.08024includedK562METAP2
SEMTRRENSG00000124275.10chr5+789584678959657892839789302678969767897069-0.095000.000000.00002excludedK562AQR
SEMTRRENSG00000124275.10chr5+788672778868167885813788596778892077889388-0.262000.000000.00000excludedK562AQR
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.322000.000000.00000excludedK562AQR
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.247000.000090.02586excludedK562HNRNPA1
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.339000.000000.00000excludedK562PUS1
SEMTRRENSG00000124275.10chr5+7890389789052578892077889388789148478915270.108000.000100.02803includedK562MTPAP
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.159000.000260.05089excludedK562MTPAP
SEMTRRENSG00000124275.10chr5+7873485787363978708827871036787537078754230.156000.001200.06779includedHepG2FTO
SEMTRRENSG00000124275.10chr5+7873485787363978708827871036787537078754230.235000.001260.05069includedHepG2MATR3
SEMTRRENSG00000124275.10chr5+789584678959657892839789302678969767897069-0.074000.001500.03116excludedK562U2AF1
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.203000.000000.00001excludedK562U2AF1
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.133000.000710.04944excludedK562HNRNPL
SEMTRRENSG00000124275.10chr5+788383678839767883267788339078858137885967-0.105000.000010.00561excludedK562SBDS
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.207000.000080.00399excludedHepG2SF3A3
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.232000.000000.00025excludedK562UTP18
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.172000.000100.02235excludedK562UPF1
SEMTRRENSG00000124275.10chr5+789148478915277889207788938878928397892876-0.149000.002270.03874excludedK562U2AF2
SEMTRRENSG00000124275.10chr5+788326778833907878056787843578858137885967-0.139000.000320.01546excludedK562TARDBP
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.193000.001920.06195excludedK562HNRNPU
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.181000.001030.02787excludedK562RBM15
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.118000.001680.05992excludedK562SF3B1
SEMTRRENSG00000124275.10chr5+7890389789052578891897889388789148478915270.150000.000040.01095includedK562ZC3H8
SEMTRRENSG00000124275.10chr5+7873485787363978708827871036787537078754230.189000.001240.05257includedK562HNRNPK
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.278000.000610.02642excludedHepG2HNRNPC
SEMTRRENSG00000124275.10chr5+787348578736397870882787103678753707875423-0.439000.000000.00000excludedK562HNRNPC
A3SSMTRRENSG00000124275.10chr5+787805678784357878061787843578753707875488-0.115000.000800.06614shorterK562AGGF1
A3SSMTRRENSG00000124275.10chr5+7897152789736078971777897360789697678970690.073000.000050.00042longerK562AQR
A3SSMTRRENSG00000124275.10chr5+7889189788938878892077889388788669178868160.079000.000240.00194longerK562AQR
A5SSMTRRENSG00000124275.10chr5+7886691788683978866917886816788920778893880.170000.001370.04963longerK562PUS1
A5SSMTRRENSG00000124275.10chr5+7885897788612478858977885967788672778868160.181000.000000.00000longerK562AQR
A5SSMTRRENSG00000124275.10chr5+7886691788683978866917886816788920778893880.153000.000390.00845longerK562AQR
MXEMTRRENSG00000124275.10chr5+788920778893887891484789152778858137885967789283978930260.201000.003020.023531includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MTRR is not avaliable on ENCORE database.