SP2

General Information

Gene Name       : SP2
Gene ID             : ENSG00000167182.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SP2ENSG00000167182.148.1613.0210.59ENCSR000AEF
HepG2SP2ENSG00000167182.149.847.778.80ENCSR985KAT
K562SP2ENSG00000167182.1413.7814.9814.38ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SP2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SP2 RNA is bound by 9 proteins.  







eCLIP assay for SP2 is not avaliable on ENCORE database.





9 proteins are bound to SP2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174600551646005649+3'-UTR4.259094.10192HepG2HNRNPK
chr174600555746005637+3'-UTR3.353323.45995K562IGF2BP2
chr174600554946005656+3'-UTR4.507785.13929K562PCBP1
chr174600603446006112+3'-UTR5.092588.44976K562PUM2
chr174599360745993694+CDS4.577656.39896K562IGF2BP2
chr174599374945993792+CDS3.292393.07653K562ZNF622
chr174599423245994302+CDS4.171883.20027K562ZNF622
chr174599390745993991+CDS4.638485.56238K562IGF2BP2
chr174599429045994360+CDS3.997343.15006K562RBM15
chr174597381145973873+intron-Distal4.388223.17453HepG2XRN2
chr174597710945977241+intron-Distal3.958653.27946HepG2HNRNPM
chr174597380745973894+intron-Distal3.095985.05027HepG2NKRF
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SP2 is not available on ENCORE database.

  • 58 RBPs can affect the levels of SP2.  








The Knockdown/knockout RNA-Seq assay for SP2 is not available on ENCORE database.





58 RBPs can affect the gene expression of SP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SP2ENSG00000167182.11767.34150978.02530-0.350002.420201.85590HepG2BOP1
SP2ENSG00000167182.11674.90970897.88750-0.411802.783702.09470HepG2CPSF6
SP2ENSG00000167182.11799.86190624.268200.357502.710201.61600HepG2CPSF7
SP2ENSG00000167182.11387.03380252.200800.617803.484102.18480HepG2DDX1
SP2ENSG00000167182.11367.06390245.171000.582102.445401.82630HepG2DNAJC2
SP2ENSG00000167182.11544.13250345.352600.655804.479403.33450HepG2EEF2
SP2ENSG00000167182.11401.83440287.662300.482101.903901.32580HepG2EIF4B
SP2ENSG00000167182.11444.22410298.157900.575103.348302.59070HepG2FXR1
SP2ENSG00000167182.11518.37870276.492500.906707.615406.53760HepG2G3BP1
SP2ENSG00000167182.11391.19090249.612200.648104.091602.98960HepG2GEMIN5
SP2ENSG00000167182.11351.93670249.651700.495302.570901.94530HepG2HNRNPA1
SP2ENSG00000167182.11421.76810275.877600.612303.949403.23600HepG2HNRNPU
SP2ENSG00000167182.11372.75670273.041400.449002.323601.54000HepG2PARN
SP2ENSG00000167182.11397.77690264.234600.590004.889804.11860HepG2PCBP1
SP2ENSG00000167182.11328.95540231.840500.504702.728801.50580HepG2PKM
SP2ENSG00000167182.11382.28410246.056600.635604.459103.54300HepG2PPIL4
SP2ENSG00000167182.11407.12400574.33460-0.496404.809303.82090HepG2PRPF4
SP2ENSG00000167182.11538.18910363.922400.564406.387905.56510HepG2PUM1
SP2ENSG00000167182.11415.03430237.770100.803602.359401.70530HepG2RAVER1
SP2ENSG00000167182.11232.95030455.31330-0.9668010.480709.61510HepG2RBM22
SP2ENSG00000167182.11377.41630264.272300.514003.145202.43100HepG2RBM25
SP2ENSG00000167182.11364.78740278.718100.388102.224801.66530HepG2RECQL
SP2ENSG00000167182.11461.38720272.793300.758106.383505.49130HepG2RPS19
SP2ENSG00000167182.11328.85110245.667000.420602.052801.48470HepG2SAFB2
SP2ENSG00000167182.11399.77310273.785400.546003.042202.05450HepG2SERBP1
SP2ENSG00000167182.11400.83580286.465300.484602.296501.70190HepG2SMN1
SP2ENSG00000167182.11710.28910383.046900.890802.731301.42970HepG2SNRNP200
SP2ENSG00000167182.11782.481801069.77960-0.451202.204501.51140HepG2SNRNP70
SP2ENSG00000167182.11334.66480514.25210-0.619806.427705.75060HepG2SRFBP1
SP2ENSG00000167182.11127.66290262.66000-1.040905.629904.87910HepG2TAF15
SP2ENSG00000167182.11354.95630267.976200.405401.832801.40790HepG2TIAL1
SP2ENSG00000167182.11511.34970334.932300.610304.997903.78810HepG2TUFM
SP2ENSG00000167182.11902.28410446.631701.014403.116302.06820HepG2U2AF2
SP2ENSG00000167182.111109.86960903.252000.297102.606602.05240K562AGGF1
SP2ENSG00000167182.11712.47100537.590300.406202.541301.97360K562AQR
SP2ENSG00000167182.11650.64550465.497000.483002.510501.51560K562CCAR1
SP2ENSG00000167182.11871.037401175.51750-0.432503.719502.81050K562CPSF6
SP2ENSG00000167182.11467.48460308.402000.600002.564701.33630K562EEF2
SP2ENSG00000167182.11413.93650297.907000.474402.302401.46890K562EFTUD2
SP2ENSG00000167182.11800.40630473.477500.757304.613003.28320K562EIF3A
SP2ENSG00000167182.11266.43020162.584400.712504.363003.37340K562EIF3G
SP2ENSG00000167182.1164.20970167.16770-1.380402.503301.83650K562G3BP2
SP2ENSG00000167182.11431.99110700.81510-0.698006.971805.76400K562GRSF1
SP2ENSG00000167182.11659.95050498.776600.403902.745602.15110K562HNRNPC
SP2ENSG00000167182.11375.54380214.506100.807905.002603.45360K562IGF2BP2
SP2ENSG00000167182.11715.76740505.934000.500403.462001.77950K562LIN28B
SP2ENSG00000167182.11310.19310224.863700.464002.475301.60710K562MATR3
SP2ENSG00000167182.11328.55610220.313300.576503.669602.10790K562PCBP1
SP2ENSG00000167182.11621.54900901.03750-0.535702.068301.36210K562PPIG
SP2ENSG00000167182.11403.41290289.900800.476602.193501.52130K562PRPF8
SP2ENSG00000167182.11321.47010218.935800.554103.439302.70840K562PTBP1
SP2ENSG00000167182.11318.89070204.633300.639903.657601.99050K562RBM34
SP2ENSG00000167182.11611.28410408.062800.583005.179903.81810K562RCC2
SP2ENSG00000167182.11676.51020386.828600.806304.220802.87740K562SRFBP1
SP2ENSG00000167182.11338.87870214.641400.658704.199103.33570K562SRSF1
SP2ENSG00000167182.11719.89260469.070200.617905.571403.97850K562SRSF4
SP2ENSG00000167182.11317.50040202.740800.647003.956302.66310K562SRSF5
SP2ENSG00000167182.11433.28730217.206600.996209.339507.92970K562TARDBP
SP2ENSG00000167182.11376.19750209.526800.844303.780602.80300K562TIA1
SP2ENSG00000167182.11373.76920205.666100.861705.975504.22850K562TRA2A
SP2ENSG00000167182.11632.25140457.010900.468203.260802.21470K562TRIM56
SP2ENSG00000167182.11865.518001189.54890-0.458803.492202.13640K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SP2 is not available on ENCORE database.





4 RBPs can affect the splicing of SP2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESP2ENSG00000167182.11chr17+4597518045975293459735154597365945992677459927540.422000.000000.00000includedHepG2U2AF1
SESP2ENSG00000167182.11chr17+4597518045975293459735154597365945992677459927540.107000.000740.07728includedK562FMR1
SESP2ENSG00000167182.11chr17+4597518045975293459735154597365945992677459927540.051000.000120.02811includedK562DROSHA
SESP2ENSG00000167182.11chr17+4597518045975293459735154597365945992677459927540.263000.002690.08772includedHepG2MATR3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SP2 is not avaliable on ENCORE database.