TCOF1

General Information

Gene Name       : TCOF1
Gene ID             : ENSG00000070814.19
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TCOF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TCOF1ENSG00000070814.1924.8538.1831.52ENCSR000AEF
HepG2TCOF1ENSG00000070814.1941.1330.6935.91ENCSR985KAT
K562TCOF1ENSG00000070814.1971.2275.6773.44ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TCOF1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TCOF1 RNA is bound by 28 proteins.  







eCLIP assay for TCOF1 is not avaliable on ENCORE database.





28 proteins are bound to TCOF1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5149779447149779539+3'-UTR3.813656.15582K562GRWD1
chr5149779586149779684+3'-UTR3.097616.40661K562PUM2
chr5149778628149778634+3'-UTR,intron-Proximal4.116308.83138K562PUM1
chr5149778598149778633+3'-UTR,CDS4.242056.81811K562UCHL5
chr5149779445149779560+3'-UTR4.1491611.60151K562ZNF800
chr5149778584149778628+3'-UTR,CDS,intron-Proximal4.0011315.05276K562PUM1
chr5149779458149779546+3'-UTR3.351306.95218K562UCHL5
chr5149779634149779713+3'-UTR3.278245.79583K562PUM1
chr5149778583149778634+3'-UTR,CDS,intron-Proximal3.5198421.94256K562ZNF800
chr5149779420149779548+3'-UTR3.9388218.34062K562PUM1
chr5149779458149779566+3'-UTR3.355944.80598K562METAP2
chr5149779628149779709+3'-UTR4.1954429.43653K562PABPC4
chr5149771107149771137+3'-UTR,CDS,intron-Distal3.098404.33023K562ZNF622
chr5149779625149779731+3'-UTR4.290446.18214HepG2GRWD1
chr5149779625149779700+3'-UTR3.9055318.34765K562DDX55
chr5149779372149779528+3'-UTR,intron-Proximal4.308868.80691HepG2GRWD1
chr5149779369149779445+3'-UTR,intron-Proximal3.6119511.99038K562ZNF800
chr5149779372149779420+3'-UTR,intron-Proximal4.4368115.52427K562PUM1
chr5149779372149779422+3'-UTR,intron-Proximal3.234655.11643K562ZNF622
chr5149769584149769629+3'-UTR,CDS,intron-Distal,intron-Proximal4.085045.47926K562AQR
chr5149737266149737410+5'-UTR,CDS3.720667.42472HepG2NCBP2
chr5149737264149737341+5'-UTR,CDS3.397754.00968HepG2DDX3X
chr5149737269149737411+5'-UTR,CDS3.185726.88823K562DDX3X
chr5149737265149737338+5'-UTR,CDS4.085133.12746HepG2GRWD1
chr5149751697149751796+CDS,intron-Distal4.211863.39686HepG2G3BP1
chr5149754937149755015+CDS,intron-Distal5.146257.36769K562FMR1
chr5149776324149776374+CDS4.790225.17531K562DDX55
chr5149777953149777997+CDS3.636903.24309K562AGGF1
chr5149776265149776404+CDS,intron-Proximal5.322878.91890K562TRA2A
chr5149754518149754571+CDS,intron-Distal3.932623.79442K562AQR
chr5149756123149756174+CDS,intron-Distal3.504104.89070K562UCHL5
chr5149754901149754937+CDS,intron-Distal,intron-Proximal3.622543.37427K562FMR1
chr5149755047149755111+CDS,intron-Distal4.110086.49194K562FXR2
chr5149771737149771784+CDS,intron-Distal,intron-Proximal5.9110811.02807K562AQR
chr5149775974149776025+CDS,intron-Distal4.097816.94741K562ZNF622
chr5149755985149756065+CDS,intron-Distal,intron-Proximal3.349878.53142K562UCHL5
chr5149775974149776099+CDS,intron-Distal4.5137314.48434K562UCHL5
chr5149748415149748459+CDS,intron-Distal4.587093.61005K562PUM1
chr5149754723149754764+CDS,intron-Distal,intron-Proximal3.999845.34978HepG2PRPF8
chr5149754901149754997+CDS,intron-Distal,intron-Proximal3.630526.83172K562FXR2
chr5149771688149771735+CDS,intron-Distal3.094595.44868K562ZNF622
chr5149755859149755891+CDS,intron-Distal3.956835.08388K562UCHL5
chr5149758603149758653+CDS,intron-Distal,intron-Proximal5.162636.83960K562AQR
chr5149771425149771551+CDS,intron-Distal,intron-Proximal3.633847.62845K562SF3B4
chr5149758921149758970+CDS,intron-Distal4.124046.94741K562ZNF622
chr5149755470149755484+CDS,intron-Distal,intron-Proximal3.663023.37925HepG2SSB
chr5149749063149749117+CDS,intron-Distal,intron-Proximal5.264276.75320K562AQR
chr5149755063149755120+CDS,intron-Distal,intron-Proximal3.269556.93667HepG2PPIG
chr5149753891149753908+CDS,intron-Distal4.374303.36385K562UCHL5
chr5149776251149776338+CDS,intron-Proximal5.1853422.11445K562UCHL5
chr5149759095149759142+CDS,intron-Distal3.986303.02253K562MTPAP
chr5149755984149756078+CDS,intron-Distal,intron-Proximal3.269556.93667HepG2PPIG
chr5149755407149755471+CDS,intron-Distal3.067324.09398HepG2GRWD1
chr5149755661149755778+CDS,intron-Distal3.348785.54854HepG2GRWD1
chr5149773024149773044+CDS,intron-Distal4.120073.45225K562GRWD1
chr5149755623149755695+CDS,intron-Distal,intron-Proximal3.892784.90219HepG2AQR
chr5149751745149751799+CDS,intron-Distal3.363286.32494K562UCHL5
chr5149753887149753950+CDS,intron-Distal,intron-Proximal4.009304.23295HepG2GRWD1
chr5149753948149753994+CDS,intron-Distal,intron-Proximal5.100734.13847K562AQR
chr5149775796149775888+CDS,intron-Distal,intron-Proximal4.027976.39986K562SF3B4
chr5149759093149759111+CDS,intron-Distal,intron-Proximal3.644363.61259K562ZNF622
chr5149776397149776455+CDS,intron-Proximal5.260145.69951K562AQR
chr5149749091149749113+CDS,intron-Distal,intron-Proximal3.099083.67697K562YBX3
chr5149755257149755296+CDS,intron-Distal,intron-Proximal4.583525.32906HepG2AQR
chr5149776324149776386+CDS3.646147.05173K562ZNF622
chr5149753736149753750+CDS,intron-Distal,intron-Proximal3.607364.79276K562ZNF622
chr5149756027149756087+CDS,intron-Distal3.888976.19451K562FXR2
chr5149759094149759116+CDS,intron-Distal,intron-Proximal4.688315.50697K562UCHL5
chr5149755619149755670+CDS,intron-Distal,intron-Proximal5.577076.44303K562AQR
chr5149771654149771739+CDS,intron-Distal4.784406.50203HepG2GRWD1
chr5149751736149751794+CDS,intron-Distal4.313554.64137K562MTPAP
chr5149777915149778017+CDS,intron-Proximal5.102546.71715HepG2BCLAF1
chr5149758918149758964+CDS,intron-Distal4.189886.81811K562UCHL5
chr5149777977149778001+CDS4.0697412.54435K562PUM1
chr5149772341149772399+CDS,intron-Distal,intron-Proximal4.8795411.09609HepG2PRPF8
chr5149740732149740775+CDS,intron-Proximal4.081123.34184HepG2GRWD1
chr5149748342149748453+CDS,intron-Distal3.210283.68893HepG2GRWD1
chr5149755985149756029+CDS,intron-Distal,intron-Proximal3.463085.04943K562ZNF622
chr5149753734149753800+CDS,intron-Distal,intron-Proximal3.031607.72751HepG2BUD13
chr5149755644149755691+CDS,intron-Distal,intron-Proximal4.332206.23016HepG2PRPF8
chr5149753906149753951+CDS,intron-Distal,intron-Proximal3.167933.73413HepG2PPIG
chr5149758893149758971+CDS,intron-Distal4.755037.40329K562GRWD1
chr5149755471149755523+CDS,intron-Distal,intron-Proximal6.9491526.38897K562AQR
chr5149753751149753800+CDS,intron-Distal3.349874.59873K562UCHL5
chr5149754655149754719+CDS,intron-Distal3.287286.62505K562UCHL5
chr5149743729149743808+CDS4.618724.01763HepG2GRWD1
chr5149743717149743779+CDS4.188318.07592K562UCHL5
chr5149776099149776251+CDS,intron-Distal,intron-Proximal4.0614918.25942K562UCHL5
chr5149747409149747483+CDS,intron-Proximal3.084946.09968K562PUM1
chr5149759096149759166+CDS,intron-Distal3.454267.87808HepG2BUD13
chr5149753753149753884+CDS,intron-Distal3.815254.14015K562DDX24
chr5149772960149773057+CDS,intron-Distal4.435019.05195K562PUM1
chr5149776338149776401+CDS4.0017012.90299K562UCHL5
chr5149758810149758894+CDS,intron-Distal4.077986.83513K562FMR1
chr5149748294149748356+CDS,intron-Distal3.522274.15299K562GRWD1
chr5149777917149778016+CDS,intron-Proximal3.617414.31749K562TRA2A
chr5149751752149751796+CDS,intron-Distal3.842476.55026K562ZNF622
chr5149776151149776203+CDS,intron-Distal4.108863.53829K562MTPAP
chr5149776233149776302+CDS,intron-Proximal4.1335910.40438K562ZNF622
chr5149740747149740774+CDS4.318344.98640K562YBX3
chr5149776229149776375+CDS,intron-Proximal4.226304.42173HepG2TRA2A
chr5149755987149756083+CDS,intron-Distal4.047488.73194K562FMR1
chr5149755258149755317+CDS,intron-Distal,intron-Proximal3.435098.23725K562AQR
chr5149777956149778023+CDS,intron-Proximal3.371587.15675HepG2AQR
chr5149773114149773165+CDS,intron-Distal,intron-Proximal4.077074.52312K562AQR
chr5149755821149755893+CDS,intron-Distal3.713119.12722K562ZNF622
chr5149749094149749138+CDS,intron-Distal4.670924.92107K562FXR2
chr5149775951149776010+CDS,intron-Distal3.272414.14939K562PUM1
chr5149776332149776383+CDS4.086343.48187K562RBM15
chr5149755471149755512+CDS,intron-Distal,intron-Proximal6.0454114.68312HepG2AQR
chr5149758834149758918+CDS,intron-Distal3.987699.87150K562UCHL5
chr5149755116149755157+CDS,intron-Distal,intron-Proximal3.648514.54206HepG2PRPF8
chr5149778003149778015+CDS,intron-Proximal3.1624913.44088K562ZNF800
chr5149778583149778598+CDS,intron-Proximal3.971838.48086K562UCHL5
chr5149777955149778015+CDS,intron-Proximal3.098626.75486K562UCHL5
chr5149771525149771562+CDS,intron-Distal4.701464.86570K562ZNF800
chr5149754606149754655+CDS,intron-Distal5.007036.96356K562UCHL5
chr5149756071149756185+CDS,intron-Distal,intron-Proximal3.737175.22975HepG2G3BP1
chr5149775842149775881+CDS,intron-Distal,intron-Proximal3.525913.99381K562BUD13
chr5149777909149777953+CDS,intron-Proximal3.814014.40430HepG2AQR
chr5149771685149771748+CDS,intron-Distal,intron-Proximal3.499544.40421K562MTPAP
chr5149755685149755784+CDS,intron-Distal5.345897.89484K562FXR2
chr5149754195149754235+CDS,intron-Distal4.714555.50697K562UCHL5
chr5149772272149772292+CDS,intron-Distal3.302113.31745K562ZNF622
chr5149758937149758972+CDS,intron-Distal,intron-Proximal4.792206.46301HepG2PPIG
chr5149737354149737416+CDS3.028923.07606K562UCHL5
chr5149740727149740773+CDS3.780774.66686K562DDX24
chr5149755040149755108+CDS,intron-Distal4.037055.64813K562DDX24
chr5149772267149772289+CDS,intron-Distal,intron-Proximal4.581815.58500K562UCHL5
chr5149748302149748369+CDS,intron-Distal3.818436.13978HepG2PPIG
chr5149777916149778003+CDS,intron-Proximal3.0897528.99788K562ZNF800
chr5149755471149755521+CDS,intron-Distal,intron-Proximal4.8852218.78550HepG2PRPF8
chr5149751747149751804+CDS,intron-Distal,intron-Proximal3.843545.20093K562DDX24
chr5149772934149773116+CDS,intron-Distal,intron-Proximal5.9639915.66673K562FXR2
chr5149753932149753996+CDS,intron-Distal,intron-Proximal4.9646511.76457HepG2PRPF8
chr5149759111149759194+CDS,intron-Distal4.506819.94776K562ZNF622
chr5149776188149776219+CDS,intron-Distal,intron-Proximal3.729323.61259K562ZNF622
chr5149772954149773083+CDS,intron-Distal4.286526.15459HepG2GRWD1
chr5149758488149758527+CDS,intron-Distal4.758635.87202K562UCHL5
chr5149775839149776064+CDS,intron-Distal,intron-Proximal5.397857.41350HepG2GRWD1
chr5149755285149755333+CDS,intron-Distal3.410996.02234K562UCHL5
chr5149755487149755516+intron-Distal,intron-Proximal3.855333.73046HepG2SSB
chr5149772358149772410+intron-Distal,intron-Proximal4.721835.17615K562AQR
chr5149772161149772265+intron-Distal,intron-Proximal4.541638.25856K562SF3B4
chr5149754383149754413+intron-Distal,intron-Proximal4.560864.09264K562AQR
chr5149755151149755153+intron-Distal,intron-Proximal4.992115.69951K562AQR
chr5149778855149778931+intron-Distal4.043563.97974HepG2RBFOX2
chr5149748467149748515+intron-Distal,intron-Proximal4.672064.86944K562AQR
chr5149747486149747572+intron-Proximal5.7538911.25363K562AQR
chr5149778640149778676+intron-Proximal5.268385.65342K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TCOF1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TCOF1 is not available on ENCORE database.

  • 149 RBPs can affect the levels of TCOF1.  








The Knockdown/knockout RNA-Seq assay for TCOF1 is not available on ENCORE database.





149 RBPs can affect the gene expression of TCOF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TCOF1ENSG00000070814.13778.823901032.27810-0.406503.231802.08080HepG2AATF
TCOF1ENSG00000070814.131994.736502503.68020-0.327902.279401.42050HepG2ABCF1
TCOF1ENSG00000070814.131374.366001913.10660-0.477208.808007.53720HepG2AKAP8L
TCOF1ENSG00000070814.13677.73080986.09420-0.541002.758901.97570HepG2ASCC1
TCOF1ENSG00000070814.131109.293802754.60560-1.3122061.9674059.53870HepG2AUH
TCOF1ENSG00000070814.13754.777301570.72180-1.057306.226804.94000HepG2BCLAF1
TCOF1ENSG00000070814.131657.329503271.21440-0.9810021.3692019.94770HepG2BOP1
TCOF1ENSG00000070814.131431.470701875.79790-0.390003.978802.50770HepG2BUD13
TCOF1ENSG00000070814.13929.580202046.88750-1.1388030.1964028.20760HepG2CALR
TCOF1ENSG00000070814.131958.403602954.94860-0.593505.045603.71010HepG2CCAR1
TCOF1ENSG00000070814.131339.165501903.76690-0.5075011.9523010.76680HepG2CKAP4
TCOF1ENSG00000070814.131192.094703003.08910-1.3329033.5749031.54490HepG2CPSF6
TCOF1ENSG00000070814.131702.562402250.77110-0.402708.663307.46280HepG2DAZAP1
TCOF1ENSG00000070814.131391.411001761.03930-0.339905.490504.36770HepG2DDX19B
TCOF1ENSG00000070814.13782.815801138.77260-0.540705.563404.63660HepG2DDX21
TCOF1ENSG00000070814.13791.320301114.49530-0.494105.210903.95030HepG2DDX24
TCOF1ENSG00000070814.131008.278701663.03840-0.721903.936502.43230HepG2DDX27
TCOF1ENSG00000070814.13832.932301141.54720-0.454701.958901.42400HepG2DDX3X
TCOF1ENSG00000070814.13900.401901777.81460-0.981505.437904.39910HepG2DDX55
TCOF1ENSG00000070814.131479.487103410.24940-1.2048011.485509.57350HepG2DDX59
TCOF1ENSG00000070814.131117.744001889.05100-0.757104.992903.66490HepG2DDX5
TCOF1ENSG00000070814.13703.74730981.04010-0.479301.819501.30820HepG2DDX6
TCOF1ENSG00000070814.13592.440201291.35860-1.1241019.6835017.49460HepG2DHX30
TCOF1ENSG00000070814.131145.948501821.70240-0.6687013.8773012.59860HepG2DKC1
TCOF1ENSG00000070814.13676.753701338.85000-0.9843019.3779017.70270HepG2DNAJC21
TCOF1ENSG00000070814.131059.481401327.19320-0.325003.293202.59280HepG2DNAJC2
TCOF1ENSG00000070814.13655.908001107.02950-0.755108.624506.67120HepG2EFTUD2
TCOF1ENSG00000070814.13684.767501048.74290-0.615004.630003.19120HepG2AGO1
TCOF1ENSG00000070814.13557.95340942.67350-0.756604.521803.77390HepG2EIF2S1
TCOF1ENSG00000070814.131734.454401014.496300.773604.212903.37350HepG2EIF4B
TCOF1ENSG00000070814.131548.235502220.59360-0.5203010.683309.24540HepG2EIF4G1
TCOF1ENSG00000070814.13783.275402127.17400-1.4413035.8062033.31050HepG2EIF4G2
TCOF1ENSG00000070814.131563.128602168.80770-0.472505.057103.62360HepG2ESF1
TCOF1ENSG00000070814.131512.156503162.78550-1.0646045.8581043.96660HepG2ETF1
TCOF1ENSG00000070814.13680.02280963.39750-0.502505.398403.73290HepG2FAM120A
TCOF1ENSG00000070814.13835.619401085.27210-0.377103.192201.97420HepG2FASTKD2
TCOF1ENSG00000070814.13929.847401479.57300-0.670103.655902.20550HepG2FKBP4
TCOF1ENSG00000070814.131259.494303008.36950-1.256108.290606.54760HepG2FTO
TCOF1ENSG00000070814.132000.773801051.511100.9280013.7478012.32790HepG2FXR1
TCOF1ENSG00000070814.13544.48480975.10410-0.840704.776903.91350HepG2G3BP1
TCOF1ENSG00000070814.131415.368903404.06030-1.2661025.1866023.46820HepG2GPKOW
TCOF1ENSG00000070814.131481.779201817.90630-0.294903.936702.78590HepG2HDGF
TCOF1ENSG00000070814.13761.670901351.67840-0.8275012.1949010.99500HepG2HNRNPA1
TCOF1ENSG00000070814.131079.751102068.56220-0.9379029.1547026.76520HepG2HNRNPA2B1
TCOF1ENSG00000070814.13842.153301503.54730-0.8362012.6722011.28540HepG2HNRNPC
TCOF1ENSG00000070814.131577.516602494.09530-0.6609016.9098015.33180HepG2HNRNPF
TCOF1ENSG00000070814.131403.62360988.143800.506303.983003.15890HepG2HNRNPK
TCOF1ENSG00000070814.131136.277202050.25560-0.8515031.0261029.07520HepG2HNRNPL
TCOF1ENSG00000070814.13952.870503248.57330-1.7695052.9798050.77810HepG2HNRNPLL
TCOF1ENSG00000070814.131092.725501493.60270-0.450905.714404.86810HepG2HNRNPU
TCOF1ENSG00000070814.13875.868301222.43130-0.481003.118801.80490HepG2HSPD1
TCOF1ENSG00000070814.131433.450002455.99070-0.7768015.8490014.27050HepG2IGF2BP1
TCOF1ENSG00000070814.131109.491001525.65630-0.459505.999404.95950HepG2ILF2
TCOF1ENSG00000070814.13399.32850695.47410-0.800404.816303.05260HepG2ILF3
TCOF1ENSG00000070814.131115.181901740.62540-0.6423017.5832015.29980HepG2KIF1C
TCOF1ENSG00000070814.132102.414103120.63430-0.569804.929903.81090HepG2LARP4
TCOF1ENSG00000070814.131495.072001051.881000.507104.255703.44500HepG2MAGOH
TCOF1ENSG00000070814.132392.844901057.667201.1777019.1657017.62280HepG2MATR3
TCOF1ENSG00000070814.13973.373402046.06600-1.0718024.7422022.67560HepG2MSI2
TCOF1ENSG00000070814.131582.528203313.50540-1.0661011.704509.70320HepG2MTPAP
TCOF1ENSG00000070814.131123.740301718.09450-0.612508.139906.10760HepG2NAA15
TCOF1ENSG00000070814.131436.988302231.86430-0.6352012.1394010.58990HepG2NOL12
TCOF1ENSG00000070814.131952.347902880.60870-0.561207.203606.03260HepG2NSUN2
TCOF1ENSG00000070814.13352.83810652.11320-0.886104.107103.01140HepG2PABPC1
TCOF1ENSG00000070814.13715.03320963.65880-0.430502.054301.42410HepG2PABPC4
TCOF1ENSG00000070814.131588.167101106.517500.521209.670108.64660HepG2PCBP1
TCOF1ENSG00000070814.13798.586701259.25760-0.657102.399901.42990HepG2PCBP2
TCOF1ENSG00000070814.131278.577501810.80020-0.502104.999702.68610HepG2PES1
TCOF1ENSG00000070814.13851.605001370.59060-0.686504.405203.41090HepG2PRPF8
TCOF1ENSG00000070814.131343.160501125.974400.254402.606902.07310HepG2PTBP1
TCOF1ENSG00000070814.131005.916902130.53220-1.0827024.7699023.22750HepG2PUF60
TCOF1ENSG00000070814.131798.310502260.01190-0.329703.586502.82810HepG2PUM2
TCOF1ENSG00000070814.131437.175601939.42840-0.432408.353707.38260HepG2PUS1
TCOF1ENSG00000070814.131409.376202359.58180-0.7435015.4398013.68340HepG2RBM15
TCOF1ENSG00000070814.131760.467102643.47640-0.5865012.4415011.50380HepG2RBM22
TCOF1ENSG00000070814.13881.899901106.67850-0.327502.476001.83410HepG2RBM25
TCOF1ENSG00000070814.131517.365201253.058600.276003.042002.47970HepG2NELFE
TCOF1ENSG00000070814.131576.718501167.131400.433906.089505.22410HepG2RECQL
TCOF1ENSG00000070814.131133.929702686.46870-1.2444031.0920029.34870HepG2RPLP0
TCOF1ENSG00000070814.13495.155601194.16090-1.270005.743104.41060HepG2RPS10
TCOF1ENSG00000070814.131253.628401048.897600.257101.818801.31000HepG2RPS19
TCOF1ENSG00000070814.13797.184401355.71430-0.766104.843403.83570HepG2RRP9
TCOF1ENSG00000070814.131074.507101330.08680-0.307802.477501.86210HepG2SAFB2
TCOF1ENSG00000070814.13799.242701052.75790-0.397502.890701.92940HepG2SERBP1
TCOF1ENSG00000070814.132545.455301314.011100.953803.000001.57890HepG2SF1
TCOF1ENSG00000070814.132929.067002132.933800.457502.983502.28250HepG2SF3A3
TCOF1ENSG00000070814.131795.813703215.34470-0.8403015.4803013.95340HepG2SF3B1
TCOF1ENSG00000070814.131504.737702042.90200-0.441109.262908.09860HepG2SLBP
TCOF1ENSG00000070814.131794.509603577.67110-0.9954010.493508.98120HepG2SNRNP70
TCOF1ENSG00000070814.131279.953602985.66150-1.2220065.8112064.20720HepG2SRFBP1
TCOF1ENSG00000070814.131832.187801223.552700.5824012.8398011.98240HepG2SRSF1
TCOF1ENSG00000070814.132293.286903460.00960-0.593405.469304.01930HepG2SRSF3
TCOF1ENSG00000070814.131610.949002103.62160-0.385006.138805.25860HepG2SRSF5
TCOF1ENSG00000070814.131125.398902450.30080-1.1225043.3655041.31190HepG2SRSF7
TCOF1ENSG00000070814.13740.93270995.45780-0.426005.275404.55650HepG2SRSF9
TCOF1ENSG00000070814.131048.035802592.17760-1.3065065.4510063.79100HepG2SSB
TCOF1ENSG00000070814.13899.067601233.08470-0.455802.775201.44740HepG2SUGP2
TCOF1ENSG00000070814.131116.774701707.08300-0.612208.446506.86790HepG2SUPT6H
TCOF1ENSG00000070814.13612.749001769.54060-1.5300010.365909.19350HepG2SUPV3L1
TCOF1ENSG00000070814.13810.478703166.81760-1.9662070.0406067.32480HepG2TARDBP
TCOF1ENSG00000070814.13714.094801185.91090-0.731804.134902.94880HepG2TFIP11
TCOF1ENSG00000070814.13519.331301451.10780-1.4824034.6682033.25830HepG2TIAL1
TCOF1ENSG00000070814.131142.193001464.30110-0.358403.976103.32380HepG2TRIM56
TCOF1ENSG00000070814.131232.965002162.62230-0.8106012.1731010.82640HepG2U2AF1
TCOF1ENSG00000070814.131004.233601891.58540-0.9135030.1176028.32770HepG2UPF1
TCOF1ENSG00000070814.131143.433001619.70790-0.502402.307401.39640HepG2UPF2
TCOF1ENSG00000070814.131331.565601944.29160-0.5461010.433608.56140HepG2UTP18
TCOF1ENSG00000070814.131810.403401336.344900.437902.445901.45060HepG2XRCC6
TCOF1ENSG00000070814.131322.220701741.92610-0.397702.010201.38430HepG2XRN2
TCOF1ENSG00000070814.13760.999101919.98350-1.3351047.3671045.29860HepG2ZC3H8
TCOF1ENSG00000070814.131220.315302080.38300-0.7696027.8346026.55980HepG2ZNF622
TCOF1ENSG00000070814.135387.973707335.19120-0.445105.381203.66600K562ABCF1
TCOF1ENSG00000070814.135243.678104256.731700.300705.767204.99570K562AGGF1
TCOF1ENSG00000070814.132437.195605681.52980-1.2211033.3351031.49940K562AQR
TCOF1ENSG00000070814.135551.417004647.407900.256303.336602.32560K562ATP5C1
TCOF1ENSG00000070814.133036.453703562.19980-0.230402.936901.94980K562BCLAF1
TCOF1ENSG00000070814.132392.960704517.77360-0.9168017.7827015.54840K562BOP1
TCOF1ENSG00000070814.133951.554705109.24900-0.370703.115901.59230K562BUD13
TCOF1ENSG00000070814.133624.976804919.55370-0.440607.051104.66500K562CEBPZ
TCOF1ENSG00000070814.134335.284806830.37230-0.655804.570603.16250K562CNOT7
TCOF1ENSG00000070814.132757.206604803.67630-0.8009019.8092017.69750K562CPSF6
TCOF1ENSG00000070814.138071.2855010024.32690-0.312604.431103.18960K562CELF1
TCOF1ENSG00000070814.134736.460805654.34790-0.255603.737302.32650K562DDX21
TCOF1ENSG00000070814.132455.858203056.41570-0.315603.246802.11070K562DDX3X
TCOF1ENSG00000070814.136244.705707067.46210-0.178602.369801.75950K562DDX47
TCOF1ENSG00000070814.136791.219404766.298700.5107012.6025010.43020K562DKC1
TCOF1ENSG00000070814.132364.929203160.59320-0.418404.319802.61420K562DNAJC21
TCOF1ENSG00000070814.132469.419603242.38450-0.392902.686001.78730K562EFTUD2
TCOF1ENSG00000070814.132707.057403357.11690-0.310504.876403.25120K562EIF2S1
TCOF1ENSG00000070814.133651.147305512.47150-0.5943016.3508014.81610K562EIF2S2
TCOF1ENSG00000070814.132645.011301740.674200.6035012.4335010.71540K562EIF3G
TCOF1ENSG00000070814.136059.461508152.69040-0.428109.360907.66970K562EIF4G2
TCOF1ENSG00000070814.133932.621505606.27940-0.511604.107202.07490K562ESF1
TCOF1ENSG00000070814.133364.681402787.286500.271502.982201.62760K562EWSR1
TCOF1ENSG00000070814.131475.163901862.22340-0.336203.145501.43390K562FASTKD2
TCOF1ENSG00000070814.133965.899605272.71960-0.410904.768903.63400K562FIP1L1
TCOF1ENSG00000070814.131799.207503170.30530-0.8173012.105209.56220K562FKBP4
TCOF1ENSG00000070814.132671.112104887.65220-0.8717015.2078013.11810K562FMR1
TCOF1ENSG00000070814.132150.935504142.73720-0.9456016.7224014.29730K562FTO
TCOF1ENSG00000070814.131119.814401538.91390-0.458705.595703.61030K562FUS
TCOF1ENSG00000070814.134615.706303320.752000.4749010.552809.45750K562FXR1
TCOF1ENSG00000070814.13537.663901416.73650-1.3978011.150409.53980K562G3BP2
TCOF1ENSG00000070814.134535.970205563.16500-0.294504.148802.76310K562GLRX3
TCOF1ENSG00000070814.132432.708804586.31820-0.9148021.2206018.88120K562GPKOW
TCOF1ENSG00000070814.134460.017107345.84560-0.7199016.2949014.41270K562GRSF1
TCOF1ENSG00000070814.134663.361905665.08460-0.280702.546901.51550K562HNRNPA1
TCOF1ENSG00000070814.132037.951503650.41620-0.8409019.2410017.74450K562HNRNPC
TCOF1ENSG00000070814.133363.292004336.85050-0.366802.916501.95700K562HNRNPM
TCOF1ENSG00000070814.135088.707106274.04110-0.302103.020202.08960K562HNRNPU
TCOF1ENSG00000070814.134280.107507148.73970-0.7400013.5586011.84550K562HSPD1
TCOF1ENSG00000070814.134335.975406235.05030-0.524002.797801.36880K562ILF2
TCOF1ENSG00000070814.131877.726103070.80460-0.709609.284506.70710K562ILF3
TCOF1ENSG00000070814.131933.206903916.17140-1.0184013.7872011.56500K562KRR1
TCOF1ENSG00000070814.133964.364702615.643500.599804.476803.40110K562MAGOH
TCOF1ENSG00000070814.136779.079105265.892700.364304.993703.70060K562MBNL1
TCOF1ENSG00000070814.132927.527704476.76280-0.6128010.343808.57650K562METAP2
TCOF1ENSG00000070814.134875.273708689.95940-0.8339017.9955015.37880K562MSI2
TCOF1ENSG00000070814.134458.866205848.96240-0.391509.905908.47860K562MTPAP
TCOF1ENSG00000070814.136451.584208917.66510-0.467006.003003.76240K562NOL12
TCOF1ENSG00000070814.135394.729306498.61080-0.268608.114806.93210K562NSUN2
TCOF1ENSG00000070814.132832.775006561.99210-1.2119013.4557010.78170K562PABPC1
TCOF1ENSG00000070814.133957.033606209.41680-0.650008.418706.96980K562PCBP3
TCOF1ENSG00000070814.133311.925904762.76270-0.524109.447008.00320K562POLR2G
TCOF1ENSG00000070814.134361.538805985.52690-0.456605.348504.14720K562PPIG
TCOF1ENSG00000070814.132433.827304085.63840-0.747304.618402.25150K562PRPF6
TCOF1ENSG00000070814.133790.814302541.448800.576803.698302.94230K562PTBP1
TCOF1ENSG00000070814.135934.961508895.20250-0.583809.384107.85890K562PUF60
TCOF1ENSG00000070814.137835.977909461.43010-0.271903.297002.12710K562PUM1
TCOF1ENSG00000070814.136555.490709270.34190-0.4999012.8352010.78210K562PUM2
TCOF1ENSG00000070814.13695.352301351.54410-0.958803.696402.01730K562RAVER1
TCOF1ENSG00000070814.135269.086804279.997900.299804.251203.53210K562RBM15
TCOF1ENSG00000070814.135238.419104243.961600.303603.192502.03000K562SAFB
TCOF1ENSG00000070814.133104.692004361.78980-0.490504.766603.46550K562SF3B1
TCOF1ENSG00000070814.132124.750401472.276600.529108.067406.56300K562SF3B4
TCOF1ENSG00000070814.132442.207703237.13370-0.406504.010402.46940K562SLBP
TCOF1ENSG00000070814.131220.532801598.37020-0.389103.669701.77420K562SND1
TCOF1ENSG00000070814.133530.249102831.232500.318202.945801.87750K562SRFBP1
TCOF1ENSG00000070814.133877.475502491.748500.637905.072804.11910K562SRSF1
TCOF1ENSG00000070814.133864.183605045.82970-0.384907.199605.30370K562SRSF7
TCOF1ENSG00000070814.131408.834501795.54160-0.349902.814301.52450K562SSB
TCOF1ENSG00000070814.134943.296106327.62000-0.356202.985301.67920K562STAU1
TCOF1ENSG00000070814.132181.274003053.62110-0.485404.042902.79680K562SUPV3L1
TCOF1ENSG00000070814.135970.110504777.274200.321504.223203.20310K562SYNCRIP
TCOF1ENSG00000070814.13894.629101390.62040-0.636403.260501.62080K562TAF15
TCOF1ENSG00000070814.132308.556103148.09220-0.447503.918302.79180K562TIAL1
TCOF1ENSG00000070814.135956.226607598.36520-0.351308.048505.83440K562TROVE2
TCOF1ENSG00000070814.13728.094901417.59890-0.9613013.2205011.45200K562U2AF2
TCOF1ENSG00000070814.132156.173503232.54870-0.584204.928703.52900K562UCHL5
TCOF1ENSG00000070814.134882.284506890.62370-0.497107.793206.66220K562UPF1
TCOF1ENSG00000070814.134340.003205862.91720-0.433904.065702.59980K562UTP3
TCOF1ENSG00000070814.134003.297505896.07460-0.558609.899508.20580K562WDR3
TCOF1ENSG00000070814.135459.945306131.33260-0.167302.461701.66080K562WDR43
TCOF1ENSG00000070814.134195.585606400.64990-0.6093010.268608.48870K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TCOF1 is not available on ENCORE database.





18 RBPs can affect the splicing of TCOF1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETCOF1ENSG00000070814.13chr5+149758791149758971149758467149758605149759094149760422-0.086000.000730.01613excludedK562SRSF1
SETCOF1ENSG00000070814.13chr5+149762624149762735149759094149759295149767464149767651-0.116000.000630.01424excludedK562SRSF1
SETCOF1ENSG00000070814.13chr5+149762624149762735149759094149759295149767464149767651-0.140000.000530.08863excludedK562FTO
SETCOF1ENSG00000070814.13chr5+149771106149771220149769449149769586149771519149771739-0.240000.000640.01457excludedK562SF3B4
SETCOF1ENSG00000070814.13chr5+149767464149767651149759094149759295149769449149769586-0.098000.000040.00260excludedK562PRPF8
SETCOF1ENSG00000070814.13chr5+149771106149771220149769449149769586149771519149771739-0.330000.000000.00003excludedHepG2U2AF1
SETCOF1ENSG00000070814.13chr5+1497626241497627351497590941497592951497674641497676510.213000.002460.05517includedHepG2HNRNPK
SETCOF1ENSG00000070814.13chr5+149771106149771220149769449149769586149771519149771739-0.137000.003180.03208excludedK562AQR
SETCOF1ENSG00000070814.13chr5+149758791149758971149758467149758605149759094149760422-0.073000.000030.00237excludedK562FXR1
SETCOF1ENSG00000070814.13chr5+149771106149771220149769449149769586149771519149771739-0.156000.000030.00237excludedK562FXR1
SETCOF1ENSG00000070814.13chr5+149762624149762735149759094149759295149767464149767651-0.268000.000190.00573excludedK562U2AF1
SETCOF1ENSG00000070814.13chr5+1497626241497627351497590941497592951497674641497676510.217000.000060.01782includedHepG2RBM15
SETCOF1ENSG00000070814.13chr5+1497626241497627351497590941497592951497674641497676510.151000.000000.00020includedK562HNRNPU
SETCOF1ENSG00000070814.13chr5+149771106149771220149769449149769586149771519149771739-0.252000.000130.00812excludedK562SF3B1
SETCOF1ENSG00000070814.13chr5+149762624149762735149759094149759295149767464149767651-0.143000.000060.00453excludedK562SF3B1
SETCOF1ENSG00000070814.13chr5+1497626241497627351497590941497592951497674641497676510.252000.000080.00608includedK562HNRNPK
SETCOF1ENSG00000070814.13chr5+149751568149751799149749091149749165149753736149753949-0.349000.001430.05128excludedHepG2HNRNPC
SETCOF1ENSG00000070814.13chr5+149762624149762735149759094149759295149767464149767651-0.176000.000500.02236excludedHepG2HNRNPC
SETCOF1ENSG00000070814.13chr5+149771106149771220149769449149769586149771519149771739-0.167000.000230.05270excludedK562SAFB
SETCOF1ENSG00000070814.13chr5+149771106149771220149769449149769586149771519149771739-0.252000.000000.00000excludedK562HNRNPC
SETCOF1ENSG00000070814.13chr5+149762624149762735149759094149759295149767464149767651-0.095000.002600.04187excludedK562HNRNPC
A3SSTCOF1ENSG00000070814.13chr5+149767464149767651149767505149767651149759094149759295-0.216000.000420.06580shorterK562RBM22
A3SSTCOF1ENSG00000070814.13chr5+149767464149767651149767505149767651149759094149759295-0.271000.001210.09216shorterHepG2RBM22
A3SSTCOF1ENSG00000070814.13chr5+1497473891497474801497474061497474801497436541497438150.080000.000000.00000longerK562AQR
A5SSTCOF1ENSG00000070814.13chr5+1497675051497677481497675051497676511497694491497695860.071000.000000.00000longerK562AQR
RITCOF1ENSG00000070814.13chr5+1497711061497717391497711061497712201497715191497717390.073000.000560.00443includedK562PUS1
RITCOF1ENSG00000070814.13chr5+1497552831497558931497552831497554721497556441497558930.242000.000000.00000includedK562RBM22
RITCOF1ENSG00000070814.13chr5+1497711061497717391497711061497712201497715191497717390.179000.001100.01701includedK562U2AF2
RITCOF1ENSG00000070814.13chr5+1497711061497717391497711061497712201497715191497717390.106000.001580.06200includedHepG2HNRNPC
RITCOF1ENSG00000070814.13chr5+1497552831497558931497552831497554721497556441497558930.124000.000220.00641includedHepG2TIAL1
RITCOF1ENSG00000070814.13chr5+1497552831497558931497552831497554721497556441497558930.329000.000000.00000includedHepG2RBM22
RITCOF1ENSG00000070814.13chr5+1497552831497558931497552831497554721497556441497558930.053000.000660.00881includedK562EFTUD2
RITCOF1ENSG00000070814.13chr5+1497711061497717391497711061497712201497715191497717390.082000.000000.00007includedK562EFTUD2
RITCOF1ENSG00000070814.13chr5+1497552831497558931497552831497554721497556441497558930.054000.000080.00069includedK562AQR
RITCOF1ENSG00000070814.13chr5+1497711061497717391497711061497712201497715191497717390.205000.000000.00000includedK562AQR
MXETCOF1ENSG00000070814.13chr5+1497694491497695861497711061497712201497590941497592951497715191497717390.162000.000010.001661includedK562FXR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TCOF1 is not avaliable on ENCORE database.