COL1A1

General Information

Gene Name       : COL1A1
Gene ID             : ENSG00000108821.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: COL1A1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878COL1A1ENSG00000108821.130.341.270.81ENCSR000AEF
HepG2COL1A1ENSG00000108821.131.640.230.93ENCSR985KAT
K562COL1A1ENSG00000108821.130.460.610.54ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for COL1A1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on COL1A1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for COL1A1 is not avaliable on ENCORE database.






NO known proteins are bound to COL1A1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for COL1A1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for COL1A1 is not available on ENCORE database.

  • 151 RBPs can affect the levels of COL1A1.  








The Knockdown/knockout RNA-Seq assay for COL1A1 is not available on ENCORE database.





151 RBPs can affect the gene expression of COL1A1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
COL1A1ENSG00000108821.91497.3214070.747704.40350251.65750248.58070HepG2ACO1
COL1A1ENSG00000108821.924.6050066.04300-1.424503.899802.74010HepG2ADAR
COL1A1ENSG00000108821.9266.722707.704605.1134023.0644021.69570HepG2AKAP1
COL1A1ENSG00000108821.9102.1434020.496502.3170010.316908.43970HepG2AKAP8
COL1A1ENSG00000108821.931.975006.372502.326902.484101.73700HepG2ASCC1
COL1A1ENSG00000108821.952.59160145.28610-1.466008.553107.45760HepG2AUH
COL1A1ENSG00000108821.9299.53220142.815001.068503.275402.25770HepG2BCCIP
COL1A1ENSG00000108821.916.88450124.05630-2.877208.063606.63100HepG2BCLAF1
COL1A1ENSG00000108821.943.51270652.21950-3.905802.987202.36790HepG2BOP1
COL1A1ENSG00000108821.927.4098091.15860-1.733706.345105.23900HepG2CALR
COL1A1ENSG00000108821.978.52580195.79330-1.318104.528003.26540HepG2CCAR1
COL1A1ENSG00000108821.930.6146070.75360-1.208603.642202.89700HepG2CKAP4
COL1A1ENSG00000108821.941.8150088.16030-1.076103.138901.99820HepG2CSTF2
COL1A1ENSG00000108821.927.5561067.82020-1.299303.563402.25050HepG2DDX1
COL1A1ENSG00000108821.914.6450055.74660-1.928504.929703.70130HepG2DDX24
COL1A1ENSG00000108821.936.805407.375202.319103.806203.08430HepG2DDX3X
COL1A1ENSG00000108821.9246.2706064.081301.9422017.4367014.57000HepG2DDX52
COL1A1ENSG00000108821.9785.71620140.437002.4840010.754509.34850HepG2DDX55
COL1A1ENSG00000108821.942.09400680.03170-4.013903.066002.03750HepG2DDX59
COL1A1ENSG00000108821.995.005606.347703.903607.093106.14270HepG2DDX6
COL1A1ENSG00000108821.918.0943064.14080-1.825705.350204.01630HepG2DHX30
COL1A1ENSG00000108821.9126.3681066.501000.926103.841003.02350HepG2DNAJC21
COL1A1ENSG00000108821.938.5362065.91630-0.774401.887001.33020HepG2DNAJC2
COL1A1ENSG00000108821.9360.3803076.414802.2375022.9050020.72870HepG2EEF2
COL1A1ENSG00000108821.9498.3477062.007603.006507.502506.07930HepG2EIF3D
COL1A1ENSG00000108821.9128.754506.558304.2950014.2963012.80160HepG2EIF4B
COL1A1ENSG00000108821.916.2832072.87450-2.162007.312206.06730HepG2EIF4G1
COL1A1ENSG00000108821.9266.14880166.812700.673904.344003.62060HepG2ETF1
COL1A1ENSG00000108821.910.4194050.95200-2.289905.742403.31020HepG2EXOSC9
COL1A1ENSG00000108821.91719.4037088.539104.27930131.57670127.79180HepG2FIP1L1
COL1A1ENSG00000108821.920.20020116.86830-2.532407.691705.73430HepG2FKBP4
COL1A1ENSG00000108821.9199.0594069.107101.526209.576206.68220HepG2FMR1
COL1A1ENSG00000108821.926.798403.090603.116103.909302.98400HepG2FUBP3
COL1A1ENSG00000108821.9127.1331055.959501.183803.164701.97020HepG2FUS
COL1A1ENSG00000108821.9432.021606.802405.9888084.7892081.66880HepG2FXR1
COL1A1ENSG00000108821.9258.4650055.202502.227109.791108.16340HepG2GEMIN5
COL1A1ENSG00000108821.91412.6844063.470504.4761027.6172024.54290HepG2GNB2L1
COL1A1ENSG00000108821.986.40050679.14510-2.974602.225501.64760HepG2GPKOW
COL1A1ENSG00000108821.930.1550067.55670-1.163703.491502.40370HepG2HDGF
COL1A1ENSG00000108821.97.1558053.80370-2.910503.892802.22690HepG2HLTF
COL1A1ENSG00000108821.921.4254067.88580-1.663804.902003.71570HepG2HNRNPA2B1
COL1A1ENSG00000108821.928.2592074.67960-1.402003.642902.85580HepG2HNRNPC
COL1A1ENSG00000108821.956.11050389.26000-2.7944033.1118031.09920HepG2HNRNPF
COL1A1ENSG00000108821.980.325106.402103.649109.163507.95130HepG2HNRNPK
COL1A1ENSG00000108821.915.7342067.28650-2.096406.745805.73920HepG2HNRNPL
COL1A1ENSG00000108821.9872.2668061.077003.8360059.4017056.31200HepG2HNRNPM
COL1A1ENSG00000108821.935.8190074.18580-1.050402.974802.34820HepG2HNRNPU
COL1A1ENSG00000108821.935.32050383.31610-3.4400038.1979035.99580HepG2IGF2BP1
COL1A1ENSG00000108821.994.125606.401403.8780016.6510015.16130HepG2IGF2BP2
COL1A1ENSG00000108821.931.1138075.77820-1.284204.466803.55360HepG2ILF2
COL1A1ENSG00000108821.945.134606.444902.807904.909603.54040HepG2KHSRP
COL1A1ENSG00000108821.929.0423064.68550-1.155303.199402.10500HepG2KIF1C
COL1A1ENSG00000108821.9151.9822062.243601.287804.500803.04990HepG2LARP7
COL1A1ENSG00000108821.952.962306.804902.960205.854004.91010HepG2MAGOH
COL1A1ENSG00000108821.9153.3571052.630801.542807.909105.36360HepG2MARK2
COL1A1ENSG00000108821.928.508506.840002.059202.557601.94870HepG2MATR3
COL1A1ENSG00000108821.9273.7341071.640101.9338017.8039015.96720HepG2MSI2
COL1A1ENSG00000108821.9232.3753073.245901.6655015.4438013.71390HepG2NOL12
COL1A1ENSG00000108821.9488.44380129.059501.920102.863701.74960HepG2NONO
COL1A1ENSG00000108821.927.34700574.46100-4.392803.264702.45290HepG2NSUN2
COL1A1ENSG00000108821.9133.4183051.283101.379306.642204.79100HepG2PKM
COL1A1ENSG00000108821.9262.8831099.327401.404104.134003.20900HepG2PRPF4
COL1A1ENSG00000108821.9165.540504.183405.3063041.1023039.51600HepG2PTBP1
COL1A1ENSG00000108821.924.1256074.22330-1.621305.497304.72070HepG2PUM1
COL1A1ENSG00000108821.9182.5420074.168901.299201.866401.31000HepG2PUM2
COL1A1ENSG00000108821.99.0404051.06750-2.498003.656702.84910HepG2RAVER1
COL1A1ENSG00000108821.917.32540102.67450-2.5671013.0925011.43740HepG2RBM15
COL1A1ENSG00000108821.9261.95510139.423600.909702.464101.96770HepG2RBM22
COL1A1ENSG00000108821.9243.5134073.620501.725705.600503.14000HepG2RBM39
COL1A1ENSG00000108821.9237.9523060.958201.964708.065706.27280HepG2RCC2
COL1A1ENSG00000108821.9970.065604.654207.70330221.35850218.56670HepG2NELFE
COL1A1ENSG00000108821.9163.000804.337505.2318038.0561036.28040HepG2RECQL
COL1A1ENSG00000108821.95.8791050.23750-3.095104.316203.14180HepG2RPS10
COL1A1ENSG00000108821.9403.5277060.360002.7409040.7028038.84940HepG2RPS19
COL1A1ENSG00000108821.9429.3031069.212402.6328011.6981010.14990HepG2RPS2
COL1A1ENSG00000108821.995.307306.996603.7678010.855509.31720HepG2RPS3A
COL1A1ENSG00000108821.9236.4367070.671001.7422011.613409.42620HepG2RPS5
COL1A1ENSG00000108821.919.89120107.04840-2.428107.307006.10160HepG2RRP9
COL1A1ENSG00000108821.927.2852066.06520-1.275803.565402.85020HepG2SAFB2
COL1A1ENSG00000108821.98.20170641.64570-6.289704.966704.04270HepG2SF3B1
COL1A1ENSG00000108821.9101.509004.352204.5436016.4692015.21060HepG2SF3B4
COL1A1ENSG00000108821.9356.9676077.042402.2120035.5523033.69500HepG2SMN1
COL1A1ENSG00000108821.913.8959052.28620-1.911802.324201.45510HepG2SMNDC1
COL1A1ENSG00000108821.916.2425072.55300-2.159302.559601.31810HepG2SNRNP200
COL1A1ENSG00000108821.942.34490713.88630-4.075403.129502.29740HepG2SNRNP70
COL1A1ENSG00000108821.933.34120133.72220-2.003906.139403.86940HepG2SRP68
COL1A1ENSG00000108821.9175.394104.544105.2704039.3090037.98160HepG2SRSF1
COL1A1ENSG00000108821.932.86590689.96110-4.391903.387602.26980HepG2SRSF3
COL1A1ENSG00000108821.934.7324069.03600-0.991102.458501.86430HepG2SRSF5
COL1A1ENSG00000108821.962.79820382.41400-2.6063037.0693035.11900HepG2SRSF7
COL1A1ENSG00000108821.981.08630136.71990-0.753703.013802.48350HepG2SSB
COL1A1ENSG00000108821.97.2051047.73480-2.727903.803002.38540HepG2SUB1
COL1A1ENSG00000108821.9245.9722078.512701.6474016.1961014.89170HepG2SUCLG1
COL1A1ENSG00000108821.931.6207059.77070-0.918602.258501.40530HepG2SUPT6H
COL1A1ENSG00000108821.9559.96310139.771402.0022011.016809.81680HepG2SUPV3L1
COL1A1ENSG00000108821.983.29500630.96280-2.921302.196701.53970HepG2TARDBP
COL1A1ENSG00000108821.9171.3126072.082201.248807.289706.54830HepG2TIAL1
COL1A1ENSG00000108821.928.8422072.73000-1.334404.329103.65510HepG2TRIM56
COL1A1ENSG00000108821.9180.1557075.729401.250205.742604.85460HepG2U2AF1
COL1A1ENSG00000108821.916.7086072.30440-2.113504.928703.78860HepG2UBE2L3
COL1A1ENSG00000108821.9152.8856028.244202.436305.130104.35720HepG2UTP3
COL1A1ENSG00000108821.9318.5370056.200002.5027025.8914023.16490HepG2XRCC6
COL1A1ENSG00000108821.961.59130137.59060-1.159602.999702.24480HepG2XRN2
COL1A1ENSG00000108821.97.7889098.01140-3.6535014.9456013.58780HepG2ZC3H8
COL1A1ENSG00000108821.96.7968032.17440-2.243004.125603.49470HepG2ZNF622
COL1A1ENSG00000108821.9131.0222066.300800.982603.582802.17170K562ABCF1
COL1A1ENSG00000108821.991.6549035.013301.388203.982901.92220K562ADAR
COL1A1ENSG00000108821.9428.1998077.169702.4721046.3183044.04670K562AGGF1
COL1A1ENSG00000108821.9311.5508080.300901.955907.212406.11510K562AKAP8L
COL1A1ENSG00000108821.993.6151028.716201.704806.548104.40830K562BCCIP
COL1A1ENSG00000108821.970.1501027.748101.338002.654601.71590K562BCLAF1
COL1A1ENSG00000108821.9119.2626046.179801.368705.555503.47800K562BUD13
COL1A1ENSG00000108821.984.0793034.290901.293804.398203.01020K562CCAR1
COL1A1ENSG00000108821.959.9456026.434001.181202.798101.51070K562CIRBP
COL1A1ENSG00000108821.9267.54820121.913401.133807.432504.97280K562CKAP4
COL1A1ENSG00000108821.9177.4820062.972401.494802.769101.66460K562CPEB4
COL1A1ENSG00000108821.9149.4167098.281000.604302.017101.33870K562CPSF6
COL1A1ENSG00000108821.9108.1394021.051102.3608011.264108.95280K562CSTF2
COL1A1ENSG00000108821.9238.7158098.319501.279606.829205.31630K562CELF1
COL1A1ENSG00000108821.9180.9996094.848100.932204.901203.26400K562DDX21
COL1A1ENSG00000108821.952.8708024.333301.119402.631801.34520K562DDX27
COL1A1ENSG00000108821.9252.2667065.156001.9529016.0091014.55980K562DDX47
COL1A1ENSG00000108821.9157.0712061.983401.341408.492705.90830K562DDX6
COL1A1ENSG00000108821.981.2399038.395101.081203.211101.76900K562DHX30
COL1A1ENSG00000108821.9107.6735034.877101.626205.323103.88830K562EIF3A
COL1A1ENSG00000108821.985.3321035.077901.282403.382202.23050K562EIF3D
COL1A1ENSG00000108821.924.7259063.87350-1.369203.638702.70100K562EIF4A3
COL1A1ENSG00000108821.9108.9732050.669901.104703.357701.53860K562ESF1
COL1A1ENSG00000108821.9208.52160100.022301.059803.896602.87790K562FMR1
COL1A1ENSG00000108821.9141.4025084.788300.737802.523501.65410K562FTO
COL1A1ENSG00000108821.913.6529066.42670-2.282607.396606.47130K562FXR1
COL1A1ENSG00000108821.91.6665014.73920-3.144702.599501.91770K562G3BP2
COL1A1ENSG00000108821.996.9848032.887301.560104.649102.77600K562GEMIN5
COL1A1ENSG00000108821.9741.2584093.824302.9818015.3226013.41870K562GPKOW
COL1A1ENSG00000108821.9120.6381052.539501.199105.465603.97660K562HNRNPA1
COL1A1ENSG00000108821.9113.4933041.177101.462606.229404.43350K562HNRNPF
COL1A1ENSG00000108821.9100.7984058.884700.775402.385001.41090K562HNRNPL
COL1A1ENSG00000108821.9132.1807024.656302.4224012.9831010.26650K562IGF2BP2
COL1A1ENSG00000108821.973.9441034.611101.095103.135301.55120K562KHDRBS1
COL1A1ENSG00000108821.9138.3751085.210900.699402.745601.92280K562KIF1C
COL1A1ENSG00000108821.975.5855025.869301.546805.295703.96350K562MATR3
COL1A1ENSG00000108821.9144.7967095.458900.601002.191401.39850K562MBNL1
COL1A1ENSG00000108821.9204.6567091.587201.159903.663802.64680K562METAP2
COL1A1ENSG00000108821.9101.2202058.757900.784502.395401.64210K562MTPAP
COL1A1ENSG00000108821.9146.6228066.910501.131704.448903.24870K562NAA15
COL1A1ENSG00000108821.9164.7935047.916301.782008.617305.20690K562NFX1
COL1A1ENSG00000108821.9163.3613065.287101.323108.068106.88930K562NSUN2
COL1A1ENSG00000108821.9177.8246092.484300.943103.032501.98590K562PABPN1
COL1A1ENSG00000108821.955.9152023.064401.277502.791601.80740K562PCBP2
COL1A1ENSG00000108821.9120.8030054.097901.158902.221201.48880K562PPIG
COL1A1ENSG00000108821.9164.3940041.356601.9909012.8534010.61990K562PSIP1
COL1A1ENSG00000108821.9179.9258090.817000.986303.282102.23530K562PUM2
COL1A1ENSG00000108821.9149.9543079.619200.913203.813503.18990K562PUS1
COL1A1ENSG00000108821.998.2128036.592801.424304.848002.26260K562RBFOX2
COL1A1ENSG00000108821.9231.3341077.591301.5759013.8884012.55440K562RBM15
COL1A1ENSG00000108821.9362.58500113.788901.671903.713901.86340K562RBM39
COL1A1ENSG00000108821.9143.0362032.483402.1385010.489108.87230K562RPS19
COL1A1ENSG00000108821.9361.8525095.398101.9233011.717908.51930K562SBDS
COL1A1ENSG00000108821.9187.0002064.419001.537407.438106.15080K562SF3A3
COL1A1ENSG00000108821.9333.5007089.266001.901406.861305.28560K562SF3B1
COL1A1ENSG00000108821.9253.90000103.208301.298605.874603.65200K562SFPQ
COL1A1ENSG00000108821.9185.9706037.756302.3002011.054908.70840K562SLBP
COL1A1ENSG00000108821.975.3437035.748601.075502.739201.72160K562SRFBP1
COL1A1ENSG00000108821.974.5446031.910801.224003.029301.31670K562SRP68
COL1A1ENSG00000108821.9126.0141065.998400.933003.732402.66500K562SRPK2
COL1A1ENSG00000108821.976.6507024.686801.634505.264104.29370K562SRSF1
COL1A1ENSG00000108821.9160.6530096.831400.730302.600901.58650K562SRSF4
COL1A1ENSG00000108821.951.0241023.312701.130002.463201.47960K562SRSF5
COL1A1ENSG00000108821.9125.9141057.193701.138404.344102.70790K562STAU1
COL1A1ENSG00000108821.972.1110030.852001.224802.781201.76260K562SUPV3L1
COL1A1ENSG00000108821.960.1970024.101901.320403.341402.43040K562TIA1
COL1A1ENSG00000108821.9120.4476039.781101.598207.135105.57570K562TIAL1
COL1A1ENSG00000108821.979.6398023.646601.751805.893004.15610K562TRA2A
COL1A1ENSG00000108821.9168.1603055.756201.592509.445906.81360K562TRIP6
COL1A1ENSG00000108821.9187.1374080.275601.221007.844605.65290K562TROVE2
COL1A1ENSG00000108821.972.1933032.679001.143402.570601.59380K562UCHL5
COL1A1ENSG00000108821.9206.7967069.225201.578708.957307.75590K562UPF1
COL1A1ENSG00000108821.9215.5954080.743101.416807.017204.69580K562UTP18
COL1A1ENSG00000108821.9172.5837068.049901.342507.181605.29780K562UTP3
COL1A1ENSG00000108821.9143.0487061.594901.215506.767505.49790K562WDR43
COL1A1ENSG00000108821.9229.9789085.592401.4258010.708108.35510K562WRN
COL1A1ENSG00000108821.990.5593033.317201.442503.964702.41470K562XRN2
COL1A1ENSG00000108821.9269.5937081.261101.7301017.8214015.50330K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for COL1A1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of COL1A1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for COL1A1 is not avaliable on ENCORE database.