ABCC3

General Information

Gene Name       : ABCC3
Gene ID             : ENSG00000108846.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ABCC3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ABCC3ENSG00000108846.150.000.140.07ENCSR000AEF
HepG2ABCC3ENSG00000108846.1541.5519.6930.62ENCSR985KAT
K562ABCC3ENSG00000108846.150.020.000.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ABCC3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ABCC3 RNA is bound by 18 proteins.  







eCLIP assay for ABCC3 is not avaliable on ENCORE database.





18 proteins are bound to ABCC3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174876105248761117+3'-UTR,CDS3.822293.18535HepG2LSM11
chr174876104548761118+3'-UTR,CDS,intron-Proximal3.389806.27819HepG2PPIG
chr174874618648746223+3'-UTR,CDS,intron-Distal,intron-Proximal4.0682911.75921HepG2HNRNPK
chr174873415848734230+3'-UTR,CDS,intron-Proximal3.297434.49099HepG2EFTUD2
chr174873661048736726+3'-UTR,5'-UTR,CDS3.190658.54450HepG2PPIG
chr174876108148761118+3'-UTR,CDS,intron-Proximal4.457783.45943HepG2BCLAF1
chr174875548148755572+3'-UTR,CDS4.292208.38781HepG2PPIG
chr174874582748745877+3'-UTR,CDS3.347413.05161HepG2PPIG
chr174874617548746219+3'-UTR,CDS,intron-Distal,intron-Proximal4.455773.44037HepG2DDX59
chr174875539948755454+3'-UTR,CDS,intron-Proximal5.626975.12752HepG2SF3A3
chr174875033148750373+3'-UTR,CDS,intron-Proximal3.752895.40651HepG2PPIG
chr174875720048757263+3'-UTR,CDS,intron-Proximal3.286103.47879HepG2PPIG
chr174874655748746598+3'-UTR,CDS3.223453.32039HepG2PPIG
chr174876130948761359+3'-UTR,CDS,intron-Proximal5.267188.25598HepG2PPIG
chr174875329348753344+3'-UTR,CDS4.187843.71570HepG2BCLAF1
chr174875306348753122+3'-UTR,CDS4.127123.49905HepG2PPIG
chr174875539648755491+3'-UTR,CDS,intron-Proximal4.234957.06578HepG2U2AF2
chr174876892948768983+3'-UTR3.994263.18535HepG2LSM11
chr174875557148755635+3'-UTR,CDS,intron-Proximal4.7691524.80523HepG2PRPF8
chr174874684448746888+3'-UTR,CDS3.627124.68902HepG2PPIG
chr174876130848761332+3'-UTR,CDS,intron-Proximal4.080343.02457HepG2BCLAF1
chr174871218048712258+5'-UTR,intron-Proximal3.951943.07217HepG2NCBP2
chr174871227548712344+5'-UTR,CDS,intron-Proximal3.136565.18770HepG2NCBP2
chr174874255848742604+CDS4.357464.38106HepG2PPIG
chr174874257348742665+CDS,intron-Proximal3.6675011.95133HepG2PRPF8
chr174871230048712385+CDS,intron-Proximal3.8992011.13244HepG2PRPF8
chr174873654048736592+CDS,intron-Proximal3.399136.79796HepG2SF3B4
chr174873423048734361+intron-Distal,intron-Proximal4.4456310.07081HepG2EFTUD2
chr174873600348736059+intron-Distal,intron-Proximal3.114003.99123HepG2XRN2
chr174873787848737968+intron-Distal4.165927.31862HepG2HNRNPK
chr174874609148746175+intron-Distal,intron-Proximal5.181374.42259HepG2DDX59
chr174873425148734360+intron-Distal,intron-Proximal3.4657610.94351HepG2RBFOX2
chr174874612448746186+intron-Distal,intron-Proximal5.5572838.77123HepG2HNRNPK
chr174871651148716573+intron-Distal3.310647.58230HepG2HNRNPK
chr174874606048746124+intron-Distal,intron-Proximal3.9989213.38410HepG2HNRNPK
chr174871697848717016+intron-Distal3.830483.83748HepG2XRN2
chr174873460948734656+intron-Distal,intron-Proximal3.293136.89623HepG2HNRNPK
chr174874612548746163+intron-Distal,intron-Proximal4.598864.97123HepG2PCBP2
chr174874607248746125+intron-Distal,intron-Proximal4.022446.53456HepG2PCBP2
chr174871684848716905+intron-Distal4.608423.77801HepG2FKBP4
chr174871620248716287+intron-Distal5.441276.79597HepG2XPO5
chr174874595348746030+intron-Distal,intron-Proximal4.264593.41738HepG2PTBP1
chr174871817048718225+intron-Distal4.455875.26580HepG2HNRNPC
chr174873400748734058+intron-Proximal4.333525.23533HepG2SF3B4
chr174873573748735795+intron-Proximal3.9303014.19036HepG2SF3B4
chr174874484748744910+intron-Proximal4.151923.05889HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ABCC3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ABCC3 is not available on ENCORE database.

  • 121 RBPs can affect the levels of ABCC3.  








The Knockdown/knockout RNA-Seq assay for ABCC3 is not available on ENCORE database.





121 RBPs can affect the gene expression of ABCC3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ABCC3ENSG00000108846.11832.494301308.69570-0.652604.119102.83740HepG2AATF
ABCC3ENSG00000108846.113269.675801288.684401.3431023.1893021.81670HepG2ACO1
ABCC3ENSG00000108846.112985.273601941.172200.620806.519404.96480HepG2AKAP8
ABCC3ENSG00000108846.112052.004601294.564500.6645016.2683014.62000HepG2AKAP8L
ABCC3ENSG00000108846.111402.44150911.760700.621106.157905.00770HepG2ASCC1
ABCC3ENSG00000108846.112142.271001644.726000.381206.083305.12780HepG2AUH
ABCC3ENSG00000108846.112355.993401149.786501.0349015.2304013.39650HepG2BCLAF1
ABCC3ENSG00000108846.113060.467501574.796600.9585020.3197018.92370HepG2BOP1
ABCC3ENSG00000108846.11417.24240232.787800.841803.709701.48370HepG2CDC40
ABCC3ENSG00000108846.112345.43720866.249301.4369031.4908029.32580HepG2CIRBP
ABCC3ENSG00000108846.11589.543902053.06980-1.8001022.1991020.07300HepG2CNOT7
ABCC3ENSG00000108846.111852.608901277.416500.536209.372507.53550HepG2YBX3
ABCC3ENSG00000108846.111101.58000817.267800.430603.159802.01500HepG2CSTF2
ABCC3ENSG00000108846.113192.494301885.320900.759807.139806.19800HepG2CELF1
ABCC3ENSG00000108846.113679.380201442.123301.3512040.8808038.73470HepG2DDX21
ABCC3ENSG00000108846.11821.198801412.69170-0.782605.566404.26830HepG2DDX24
ABCC3ENSG00000108846.111808.907501217.341000.571303.821002.33810HepG2DDX27
ABCC3ENSG00000108846.114012.144403105.958700.369203.802102.29480HepG2DDX47
ABCC3ENSG00000108846.112413.564601301.206900.8912010.571309.17680HepG2DDX55
ABCC3ENSG00000108846.11904.755601641.78090-0.859703.578902.47000HepG2DDX59
ABCC3ENSG00000108846.112176.55690906.939401.2629014.1412012.88220HepG2DDX6
ABCC3ENSG00000108846.112489.510801232.867501.0137037.6022035.86060HepG2DKC1
ABCC3ENSG00000108846.112175.091501243.271800.8068030.3137028.39200HepG2DNAJC2
ABCC3ENSG00000108846.112029.580201434.052000.501004.766803.58540HepG2EEF2
ABCC3ENSG00000108846.112464.346201329.219000.890507.691905.88990HepG2AGO1
ABCC3ENSG00000108846.112045.876501275.792600.681204.954903.41650HepG2EIF2S2
ABCC3ENSG00000108846.111880.232501164.009100.691707.698906.26020HepG2EIF3D
ABCC3ENSG00000108846.111819.594801362.828600.416904.126902.83580HepG2EIF3G
ABCC3ENSG00000108846.115247.96830937.978702.4840063.8350060.98650HepG2EIF4B
ABCC3ENSG00000108846.11770.823801457.06840-0.918604.776003.38140HepG2ESF1
ABCC3ENSG00000108846.113013.078701888.483500.6739018.6839017.35380HepG2ETF1
ABCC3ENSG00000108846.11745.597901259.08860-0.7559010.941809.31230HepG2EWSR1
ABCC3ENSG00000108846.11885.619601291.02840-0.543803.628901.66000HepG2EXOSC9
ABCC3ENSG00000108846.112680.864401896.523800.499204.426702.34730HepG2FMR1
ABCC3ENSG00000108846.11621.229601448.19150-1.221107.177905.54970HepG2FTO
ABCC3ENSG00000108846.111828.25390773.458501.2410029.2141026.81300HepG2FUBP3
ABCC3ENSG00000108846.111621.22420972.112100.737808.722607.55430HepG2FXR1
ABCC3ENSG00000108846.112984.57860901.610601.7269042.4474039.98870HepG2G3BP1
ABCC3ENSG00000108846.112718.80700957.392101.5057036.8036033.96430HepG2G3BP2
ABCC3ENSG00000108846.111292.455101036.363700.318502.139501.35690HepG2GEMIN5
ABCC3ENSG00000108846.111258.780701638.99720-0.380802.542201.92620HepG2GPKOW
ABCC3ENSG00000108846.111215.022201900.77090-0.645604.765003.31570HepG2GRSF1
ABCC3ENSG00000108846.111211.012701737.28150-0.520603.443901.90480HepG2HNRNPA0
ABCC3ENSG00000108846.111874.506801266.299800.565806.649805.71300HepG2HNRNPA1
ABCC3ENSG00000108846.11928.285601408.54590-0.601606.954805.89700HepG2HNRNPC
ABCC3ENSG00000108846.111786.008402509.24810-0.4905010.491709.21240HepG2HNRNPF
ABCC3ENSG00000108846.11719.178801846.41880-1.3603064.9566062.35160HepG2HNRNPL
ABCC3ENSG00000108846.112141.654501564.117000.453304.320903.54970HepG2HNRNPLL
ABCC3ENSG00000108846.111586.653201171.669900.437302.458801.56010HepG2HNRNPM
ABCC3ENSG00000108846.11821.008401399.23190-0.7692018.2814016.82640HepG2HNRNPU
ABCC3ENSG00000108846.113657.026802113.407300.791004.489702.92340HepG2HSPD1
ABCC3ENSG00000108846.112083.133102470.88850-0.246302.294901.63330HepG2IGF2BP1
ABCC3ENSG00000108846.111600.87170916.408400.8047010.094008.89140HepG2IGF2BP2
ABCC3ENSG00000108846.111777.257401429.265400.314305.028104.06460HepG2ILF2
ABCC3ENSG00000108846.112830.14360921.860701.6182029.6859026.43110HepG2KHSRP
ABCC3ENSG00000108846.111864.228101177.888600.6623019.3701016.99600HepG2KIF1C
ABCC3ENSG00000108846.111347.005002111.84930-0.648804.429602.84250HepG2KRR1
ABCC3ENSG00000108846.11857.816601484.13770-0.7909011.549709.22740HepG2LIN28B
ABCC3ENSG00000108846.11710.36000977.84430-0.461102.989702.33680HepG2MATR3
ABCC3ENSG00000108846.111934.912701374.172700.493603.037002.19000HepG2MSI2
ABCC3ENSG00000108846.11579.030701000.83630-0.789508.022606.96970HepG2NCBP2
ABCC3ENSG00000108846.113176.897902002.778800.665503.108601.59130HepG2NKRF
ABCC3ENSG00000108846.112322.190802010.003800.208201.944101.30220HepG2NOL12
ABCC3ENSG00000108846.111770.380901195.153600.566802.434001.41480HepG2NONO
ABCC3ENSG00000108846.111006.471901384.97310-0.460606.938505.69420HepG2PARN
ABCC3ENSG00000108846.111183.97160926.000400.354404.261103.53650HepG2PCBP1
ABCC3ENSG00000108846.11952.219401356.18250-0.510203.529101.63380HepG2PHF6
ABCC3ENSG00000108846.11983.348001841.41550-0.905007.334004.94340HepG2PNPT1
ABCC3ENSG00000108846.111291.642302052.74180-0.668306.664003.80480HepG2PPIG
ABCC3ENSG00000108846.11445.887801189.14960-1.4152045.0779042.75970HepG2PRPF4
ABCC3ENSG00000108846.112452.94590942.273101.3802064.9031063.07300HepG2PTBP1
ABCC3ENSG00000108846.113103.762101918.767800.6937012.6042011.45490HepG2PUF60
ABCC3ENSG00000108846.111568.269702035.38810-0.376104.259003.43770HepG2PUM2
ABCC3ENSG00000108846.112164.228601312.578000.7213018.7920017.44500HepG2PUS1
ABCC3ENSG00000108846.11842.220901020.43460-0.276902.050201.50110HepG2QKI
ABCC3ENSG00000108846.11822.57440381.467801.1085010.210706.85750HepG2RBM14
ABCC3ENSG00000108846.112545.234401804.557400.496107.667506.34180HepG2RBM15
ABCC3ENSG00000108846.11572.08960926.13660-0.695008.297807.17880HepG2RBM25
ABCC3ENSG00000108846.111127.492101704.58520-0.596307.043405.45440HepG2RBM27
ABCC3ENSG00000108846.111818.146401048.632100.7939020.1157018.91530HepG2NELFE
ABCC3ENSG00000108846.111372.13150976.708100.490306.744105.84260HepG2RECQL
ABCC3ENSG00000108846.11910.451701318.69400-0.534503.117002.11640HepG2RPS10
ABCC3ENSG00000108846.112763.833001132.755301.2867037.7919035.97560HepG2RPS19
ABCC3ENSG00000108846.11819.993801942.41050-1.2442012.9256010.31630HepG2SART3
ABCC3ENSG00000108846.111121.285901958.87210-0.804906.229204.00670HepG2SBDS
ABCC3ENSG00000108846.112775.705001136.701501.2879029.4476026.74670HepG2SERBP1
ABCC3ENSG00000108846.11377.102101023.51460-1.4405017.6211015.84560HepG2SF3A3
ABCC3ENSG00000108846.11923.126101548.21910-0.746004.443103.56750HepG2SF3B1
ABCC3ENSG00000108846.112068.72590980.968701.0764023.9665022.51930HepG2SF3B4
ABCC3ENSG00000108846.112469.883101453.101200.7652030.5544028.79500HepG2SMN1
ABCC3ENSG00000108846.112674.571201782.699200.5851015.6699014.73320HepG2SRFBP1
ABCC3ENSG00000108846.11820.176001239.22220-0.595405.720003.52970HepG2SRP68
ABCC3ENSG00000108846.111072.311601665.74050-0.635405.308803.88160HepG2SRSF3
ABCC3ENSG00000108846.114435.688701894.564401.2272020.4262018.93700HepG2SRSF5
ABCC3ENSG00000108846.112082.689502465.26930-0.243303.121702.38860HepG2SRSF7
ABCC3ENSG00000108846.111394.38920833.053100.7431017.9907016.80790HepG2SRSF9
ABCC3ENSG00000108846.11947.800301547.72900-0.7075017.0747016.02720HepG2SSB
ABCC3ENSG00000108846.111877.506402154.58970-0.198602.219501.65140HepG2SUCLG1
ABCC3ENSG00000108846.111582.126102131.85530-0.430202.796901.46140HepG2SUGP2
ABCC3ENSG00000108846.11706.397901146.48650-0.698703.656602.58580HepG2SUPT6H
ABCC3ENSG00000108846.114378.903101295.236701.7573043.9368041.88190HepG2SUPV3L1
ABCC3ENSG00000108846.116226.21510920.427102.7579078.3278075.87570HepG2TAF15
ABCC3ENSG00000108846.112334.433001359.534400.7799017.3191016.26330HepG2TIAL1
ABCC3ENSG00000108846.113598.485301371.774401.3912083.0588080.59470HepG2TRIM56
ABCC3ENSG00000108846.111462.46450924.863600.661005.850503.65660HepG2TROVE2
ABCC3ENSG00000108846.111183.953801874.63750-0.663007.463805.91510HepG2TUFM
ABCC3ENSG00000108846.11550.054401452.85980-1.401207.935106.87480HepG2U2AF1
ABCC3ENSG00000108846.11192.85070705.72330-1.871607.396505.70260HepG2U2AF2
ABCC3ENSG00000108846.111142.56140907.696700.331903.625602.84180HepG2UPF1
ABCC3ENSG00000108846.11572.74670933.01710-0.7040010.995209.08410HepG2UTP18
ABCC3ENSG00000108846.111387.057601847.67900-0.413702.357601.35410HepG2XPO5
ABCC3ENSG00000108846.111756.820001275.021400.462303.436402.63300HepG2XRN2
ABCC3ENSG00000108846.112339.613601173.528800.9953023.3505021.74190HepG2ZC3H8
ABCC3ENSG00000108846.111290.71130998.298600.370502.757002.21060HepG2ZNF622
ABCC3ENSG00000108846.11933.619501341.20300-0.522603.460502.00270HepG2ZRANB2
ABCC3ENSG00000108846.1119.229402.449402.972703.051401.88380K562CPEB4
ABCC3ENSG00000108846.1135.201509.564301.879802.471201.55040K562CELF1
ABCC3ENSG00000108846.1122.736205.149202.142502.422201.67740K562GPKOW
ABCC3ENSG00000108846.1120.710802.133003.279402.054401.52910K562HNRNPC
ABCC3ENSG00000108846.1143.002104.398103.289404.621103.37700K562KRR1
ABCC3ENSG00000108846.1117.937302.055003.125703.236401.70660K562LARP7
ABCC3ENSG00000108846.1128.275606.759402.064503.319502.39270K562RBM22
ABCC3ENSG00000108846.1135.0209010.393401.752503.017002.04600K562SRPK2
ABCC3ENSG00000108846.1121.783806.994001.639001.924401.32780K562TARDBP
ABCC3ENSG00000108846.1118.117403.502302.370902.216601.31260K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ABCC3 is not available on ENCORE database.





8 RBPs can affect the splicing of ABCC3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEABCC3ENSG00000108846.11chr17+4873493848735045487344454873454448735442487355680.131000.000160.01461includedHepG2RBM22
SEABCC3ENSG00000108846.11chr17+487382834873847548736542487367294874104148741219-0.405000.002040.04773excludedHepG2HNRNPK
SEABCC3ENSG00000108846.11chr17+4873828348738475487365974873672948741041487412190.234000.000370.08509includedHepG2NOL12
A5SSABCC3ENSG00000108846.11chr17+4873579548735907487357954873585748736597487367290.177000.000150.02001longerHepG2RBM22
RIABCC3ENSG00000108846.11chr17+4875510448755580487551044875530448755453487555800.391000.001820.02199includedHepG2QKI
RIABCC3ENSG00000108846.11chr17+4875510448755580487551044875530448755453487555800.238000.012870.09398includedHepG2TAF15
RIABCC3ENSG00000108846.11chr17+4875510448755580487551044875530448755453487555800.276000.009760.06070includedHepG2SF3B4
RIABCC3ENSG00000108846.11chr17+4875510448755580487551044875530448755453487555800.516000.000410.04699includedHepG2RBFOX2
MXEABCC3ENSG00000108846.11chr17+48733192487333694873406248734188487122174871234248734406487345440.228000.000100.004071includedHepG2DDX55

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ABCC3 is not avaliable on ENCORE database.