SAGE1

General Information

Gene Name       : SAGE1
Gene ID             : ENSG00000181433.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SAGE1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SAGE1ENSG00000181433.90.000.000.00ENCSR000AEF
HepG2SAGE1ENSG00000181433.90.000.000.00ENCSR985KAT
K562SAGE1ENSG00000181433.920.8621.8721.37ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SAGE1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SAGE1 RNA is bound by 5 proteins.  







eCLIP assay for SAGE1 is not avaliable on ENCORE database.





5 proteins are bound to SAGE1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX134978417134978480+CDS3.821405.03335K562UCHL5
chrX134987530134987607+CDS,intron-Proximal3.408084.64824K562PRPF8
chrX134978405134978472+CDS3.812778.37042K562ZNF622
chrX134988241134988298+CDS,intron-Distal4.278324.07072K562UCHL5
chrX134987561134987688+intron-Distal,intron-Proximal4.361235.44709K562KHSRP
chrX134988029134988092+intron-Distal,intron-Proximal3.848913.21228K562TIA1
chrX134987607134987696+intron-Distal,intron-Proximal3.974714.93376K562PRPF8
chrX134994253134994453+intron-Distal,intron-Proximal3.326884.76825K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SAGE1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SAGE1 is not available on ENCORE database.

  • 37 RBPs can affect the levels of SAGE1.  








The Knockdown/knockout RNA-Seq assay for SAGE1 is not available on ENCORE database.





37 RBPs can affect the gene expression of SAGE1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SAGE1ENSG00000181433.51121.487801625.23820-0.535209.869508.88090K562AGGF1
SAGE1ENSG00000181433.51443.841401785.79620-0.306702.545701.61000K562AKAP8
SAGE1ENSG00000181433.51213.432501691.11060-0.478905.252804.33970K562AKAP8L
SAGE1ENSG00000181433.5845.653801326.50130-0.649507.916407.00890K562AQR
SAGE1ENSG00000181433.51182.84300924.180500.355902.700901.43900K562CIRBP
SAGE1ENSG00000181433.51844.044801107.042700.736104.997503.51780K562CNOT7
SAGE1ENSG00000181433.51439.25040891.167600.6914013.3326011.93590K562EIF2S2
SAGE1ENSG00000181433.51023.82480581.121500.817009.102006.88560K562FKBP4
SAGE1ENSG00000181433.51314.57190949.904600.468604.126603.07850K562FMR1
SAGE1ENSG00000181433.51200.20560774.300200.632204.787003.79790K562G3BP2
SAGE1ENSG00000181433.51027.10320810.484700.341602.772701.69900K562HNRNPA1
SAGE1ENSG00000181433.51023.28710669.559500.611806.955106.04890K562HNRNPC
SAGE1ENSG00000181433.51404.904701120.853600.325802.764201.71030K562HNRNPL
SAGE1ENSG00000181433.5627.01880849.81220-0.438602.758401.83020K562HNRNPM
SAGE1ENSG00000181433.51097.93300897.519600.290702.433201.59530K562HNRNPU
SAGE1ENSG00000181433.51839.751301400.674300.393303.550102.65150K562HSPD1
SAGE1ENSG00000181433.51085.16870870.014200.318702.295801.50000K562METAP2
SAGE1ENSG00000181433.51118.77260902.706400.309503.306502.42550K562MTPAP
SAGE1ENSG00000181433.51305.502001002.972800.380206.163605.10970K562NSUN2
SAGE1ENSG00000181433.51523.392001063.546100.518302.960901.67940K562PABPC1
SAGE1ENSG00000181433.51915.49350984.531500.9601014.0614012.21620K562PCBP3
SAGE1ENSG00000181433.5858.77030653.659000.393602.992401.50150K562PHF6
SAGE1ENSG00000181433.51470.22530755.203600.9610019.8644017.82720K562POLR2G
SAGE1ENSG00000181433.52504.646101950.842300.360405.208303.87350K562PUM2
SAGE1ENSG00000181433.51284.92890738.748400.798404.882402.90960K562RAVER1
SAGE1ENSG00000181433.51342.468201634.12290-0.283602.845302.24490K562RBM15
SAGE1ENSG00000181433.51213.55960989.700600.294102.817701.99630K562SF3A3
SAGE1ENSG00000181433.5599.76150805.01110-0.424603.902102.88150K562SF3B4
SAGE1ENSG00000181433.51008.41080745.957000.434804.279602.19060K562SND1
SAGE1ENSG00000181433.51230.02510760.056600.694403.722701.93300K562TAF15
SAGE1ENSG00000181433.51081.45810806.979300.422303.576601.75460K562TBRG4
SAGE1ENSG00000181433.51015.93410750.408100.437002.890101.76970K562U2AF1
SAGE1ENSG00000181433.51039.83610775.054200.423904.232203.24270K562U2AF2
SAGE1ENSG00000181433.51404.474401063.474500.401105.790004.79460K562UPF1
SAGE1ENSG00000181433.51263.26630909.979600.473205.154103.94160K562WDR3
SAGE1ENSG00000181433.51113.20950946.286600.234302.243101.47380K562WDR43
SAGE1ENSG00000181433.51619.21650959.143200.755403.300901.35820K562XPO5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SAGE1 is not available on ENCORE database.





10 RBPs can affect the splicing of SAGE1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESAGE1ENSG00000181433.5chrX+1349878001349880071349874101349875511349881821349883230.396000.000020.00088includedK562SRSF1
SESAGE1ENSG00000181433.5chrX+1349878001349880071349874101349875511349881821349883230.225000.000530.01250includedK562SF3B4
SESAGE1ENSG00000181433.5chrX+1349878001349879411349874101349875511349881821349883230.340000.000040.00880includedK562FMR1
SESAGE1ENSG00000181433.5chrX+1349878001349880071349874101349875511349881821349883230.323000.002890.02968includedK562AQR
SESAGE1ENSG00000181433.5chrX+134989859134990000134989471134989612134990247134990388-0.066000.001600.02512excludedK562PUS1
SESAGE1ENSG00000181433.5chrX+1349878001349879411349874101349875511349881821349883230.255000.000280.07150includedK562PPIL4
SESAGE1ENSG00000181433.5chrX+134989859134990000134989471134989612134990247134990388-0.072000.002430.05328excludedK562RBM15
A5SSSAGE1ENSG00000181433.5chrX+1349757841349759941349757841349759511349784011349784880.370000.000010.00228longerK562FXR1
A5SSSAGE1ENSG00000181433.5chrX+1349758841349759941349758841349759321349784011349784880.361000.000250.03267longerK562EFTUD2
A5SSSAGE1ENSG00000181433.5chrX+134975784134975994134975784134975951134978401134978488-0.154000.001020.08155shorterK562AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SAGE1 is not avaliable on ENCORE database.